NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092571

Metagenome Family F092571

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092571
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 76 residues
Representative Sequence MKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGRF
Number of Associated Samples 95
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.87 %
% of genes near scaffold ends (potentially truncated) 99.07 %
% of genes from short scaffolds (< 2000 bps) 85.05 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.430 % of family members)
Environment Ontology (ENVO) Unclassified
(27.103 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.206 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.39%    β-sheet: 0.00%    Coil/Unstructured: 53.61%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF10150RNase_E_G 27.10
PF00905Transpeptidase 2.80
PF03717PBP_dimer 1.87
PF13414TPR_11 0.93
PF13505OMP_b-brl 0.93
PF00437T2SSE 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0768Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)Cell cycle control, cell division, chromosome partitioning [D] 1.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_16892833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus4984Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100824685All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300001431|F14TB_100660087All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium533Open in IMG/M
3300002245|JGIcombinedJ26739_101257778All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300002245|JGIcombinedJ26739_101610607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300005166|Ga0066674_10043534All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2011Open in IMG/M
3300005171|Ga0066677_10478370All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia715Open in IMG/M
3300005172|Ga0066683_10001802All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia8924Open in IMG/M
3300005175|Ga0066673_10716164All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300005179|Ga0066684_10057101All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2261Open in IMG/M
3300005293|Ga0065715_10858805All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium589Open in IMG/M
3300005440|Ga0070705_101120431All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300005444|Ga0070694_100682329All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia834Open in IMG/M
3300005450|Ga0066682_10663975All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300005451|Ga0066681_10206779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1176Open in IMG/M
3300005451|Ga0066681_10684606All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium625Open in IMG/M
3300005554|Ga0066661_10462647All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium773Open in IMG/M
3300005554|Ga0066661_10619581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium641Open in IMG/M
3300005574|Ga0066694_10430363All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium618Open in IMG/M
3300005575|Ga0066702_10326396All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia935Open in IMG/M
3300005764|Ga0066903_105047902All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia700Open in IMG/M
3300006059|Ga0075017_100348098All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1103Open in IMG/M
3300006173|Ga0070716_101136123All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium625Open in IMG/M
3300006173|Ga0070716_101144437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium623Open in IMG/M
3300006175|Ga0070712_100505396All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1014Open in IMG/M
3300006796|Ga0066665_11113104All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium602Open in IMG/M
3300006954|Ga0079219_10010780All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales3057Open in IMG/M
3300009137|Ga0066709_103584763All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300009137|Ga0066709_103632379All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300009176|Ga0105242_11966926All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium626Open in IMG/M
3300009545|Ga0105237_10037697All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4885Open in IMG/M
3300010337|Ga0134062_10603759All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300011270|Ga0137391_10964731All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium695Open in IMG/M
3300012189|Ga0137388_11183311All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium702Open in IMG/M
3300012201|Ga0137365_10804604All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium686Open in IMG/M
3300012202|Ga0137363_10852557All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium773Open in IMG/M
3300012206|Ga0137380_10256858All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1574Open in IMG/M
3300012207|Ga0137381_10068656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter2961Open in IMG/M
3300012209|Ga0137379_10408688All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1266Open in IMG/M
3300012209|Ga0137379_10637242All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia972Open in IMG/M
3300012349|Ga0137387_10195338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1452Open in IMG/M
3300012351|Ga0137386_10103961All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2011Open in IMG/M
3300012354|Ga0137366_10808635All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium665Open in IMG/M
3300012362|Ga0137361_11032432All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia742Open in IMG/M
3300012363|Ga0137390_10682421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium990Open in IMG/M
3300012922|Ga0137394_10331190All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1300Open in IMG/M
3300012924|Ga0137413_11094455All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300012927|Ga0137416_11446871All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium623Open in IMG/M
3300012930|Ga0137407_10280996All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1517Open in IMG/M
3300012989|Ga0164305_11213448All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium654Open in IMG/M
3300012989|Ga0164305_11983806All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium531Open in IMG/M
3300014154|Ga0134075_10200644All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium858Open in IMG/M
3300015242|Ga0137412_10510376All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium919Open in IMG/M
3300015357|Ga0134072_10009699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2205Open in IMG/M
3300016270|Ga0182036_10461239All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1000Open in IMG/M
3300018058|Ga0187766_10774304All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium668Open in IMG/M
3300018071|Ga0184618_10476549All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium524Open in IMG/M
3300018431|Ga0066655_10707915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium682Open in IMG/M
3300018482|Ga0066669_11678336All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300019789|Ga0137408_1046932All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1156Open in IMG/M
3300020002|Ga0193730_1094346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia837Open in IMG/M
3300020170|Ga0179594_10033621All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1652Open in IMG/M
3300021168|Ga0210406_10066496All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3109Open in IMG/M
3300021168|Ga0210406_10341140All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1210Open in IMG/M
3300021478|Ga0210402_10797972All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia869Open in IMG/M
3300025922|Ga0207646_10316004All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1411Open in IMG/M
3300025922|Ga0207646_11551342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M
3300025929|Ga0207664_11378708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia625Open in IMG/M
3300026328|Ga0209802_1085674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1451Open in IMG/M
3300026331|Ga0209267_1275129All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300026335|Ga0209804_1114987All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1225Open in IMG/M
3300026351|Ga0257170_1047139All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium596Open in IMG/M
3300026358|Ga0257166_1017738All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium924Open in IMG/M
3300026446|Ga0257178_1034833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300026494|Ga0257159_1032884All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia865Open in IMG/M
3300026498|Ga0257156_1109150All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300026514|Ga0257168_1107862All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium620Open in IMG/M
3300026530|Ga0209807_1215192All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium662Open in IMG/M
3300026536|Ga0209058_1352574All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium510Open in IMG/M
3300026538|Ga0209056_10590130All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium561Open in IMG/M
3300026540|Ga0209376_1343449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300026542|Ga0209805_1107694All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1325Open in IMG/M
3300026550|Ga0209474_10152526All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1504Open in IMG/M
3300026552|Ga0209577_10047324All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus3649Open in IMG/M
3300026552|Ga0209577_10350511All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1086Open in IMG/M
3300026880|Ga0209623_1016717All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300027537|Ga0209419_1062768All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia728Open in IMG/M
3300027635|Ga0209625_1054727All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium890Open in IMG/M
3300027643|Ga0209076_1090766All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium868Open in IMG/M
3300027651|Ga0209217_1001776All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus6982Open in IMG/M
3300027651|Ga0209217_1003868All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium4997Open in IMG/M
3300027671|Ga0209588_1266683All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300027684|Ga0209626_1216113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium508Open in IMG/M
3300027903|Ga0209488_10099268All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2181Open in IMG/M
3300028884|Ga0307308_10389582All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium668Open in IMG/M
3300031231|Ga0170824_103840346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium682Open in IMG/M
3300031545|Ga0318541_10844024All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium511Open in IMG/M
3300031718|Ga0307474_10270412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1305Open in IMG/M
3300031720|Ga0307469_11424203All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium661Open in IMG/M
3300031740|Ga0307468_101171023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium691Open in IMG/M
3300031754|Ga0307475_10330667All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1224Open in IMG/M
3300031896|Ga0318551_10627842All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium621Open in IMG/M
3300031962|Ga0307479_10167463All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2158Open in IMG/M
3300031962|Ga0307479_11722627All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium580Open in IMG/M
3300032025|Ga0318507_10209613All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium842Open in IMG/M
3300032180|Ga0307471_100050892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus3417Open in IMG/M
3300033290|Ga0318519_10974174All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.15%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_026857402088090014SoilMKKLTLTFCALFALLVVAPAIYADGPERMSGKEVMQPAPPVCDFYRAHEWDMSIWGAWMFAADT
INPhiseqgaiiFebDRAFT_10082468513300000364SoilMKKLTLTFCALFALLVVAPAIYADGPERMSGKEVMQPAPPVCDFYRAHEWDMSIWGAWMFAADTGQFDVPDEDPFSTSIA
F14TB_10066008713300001431SoilMKKLTLTFCALFALLVVAPAIYADGPERMSGKEVMQPAPPVCDFYRAHEWDMSIWGAWMFAADTGQFDVPDEDPFSTSIAGGPFFKPDQDPTLAG
JGIcombinedJ26739_10125777823300002245Forest SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWD
JGIcombinedJ26739_10161060713300002245Forest SoilMKKLTLTFCALFAFVSALYAGNEKYSGKEKEVMQPAPPVCELYRAHEWDLNFWGTFVFSANPGRNHVGNDDP
Ga0066674_1004353413300005166SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFDQPNDDPFFPDTDVTNTTQTTIL
Ga0066677_1047837023300005171SoilMKKLTLTFCALFALLVVAPAYADGPERYSGKEKEVMQPAPPTCDLYRAHEWDLDIWGAYA
Ga0066683_1000180213300005172SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETVLSVFGTTLFVISSSE
Ga0066673_1071616423300005175SoilMKKLTLTFCALFALFAAAPAIFADGPEAYSGKKEVMQPAPPVCDFYRAHEWNLGIWGAFAFAADTGQFDVPEVDPFS
Ga0066684_1005710113300005179SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGRFHQPTDANLSIARGGGDP
Ga0065715_1085880513300005293Miscanthus RhizosphereMKKLTLTFCALFALFVVAPAFADGPERVSSKEKEVMQPAPPVCDFYRAHEWDLGIWAAWAFAADTGKY
Ga0070705_10112043113300005440Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFSALFALFAVAPVLFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWAAYAFGDST
Ga0070694_10068232913300005444Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFCALFALFAATPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWAAWAFAS
Ga0066682_1066397513300005450SoilMKKLTLTFCALFALVIVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGRIDVPNDDPFFPDTD
Ga0066681_1020677913300005451SoilMKKLTLTFCAMFALFVVAPAIYADGPERVSSKEKEVMQPAPPVCDFYRAHEW
Ga0066681_1068460623300005451SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETVLS
Ga0066661_1046264713300005554SoilMKKLTLTFCALFALIVAPAIYADGPEKYSGKEKEVMQPAPPVCDLYRAHEWDLDIWGAFAFASDTGQFDVPNDDPFTPDTDVINQTFISIFGIPIIF
Ga0066661_1061958113300005554SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLS
Ga0066694_1043036313300005574SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETVLSVFGTTLFVISSSEPRNFN
Ga0066702_1032639623300005575SoilMKKLTLTFCALSALLVVAPAIYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGTWAFAADTGRFDQPTD
Ga0066903_10504790223300005764Tropical Forest SoilMKKLTLTFCALFALFVVAPAIFADDGVSSKEKEVLQPAPPVCDFYRAHEWDLDLWGAYAFGGTTG
Ga0075017_10034809823300006059WatershedsMKKLTLTFCALFALFAAAPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWGAYAFASDTGHFDVPEVDPFSPDTDPTTVDILTGFN
Ga0070716_10113612323300006173Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFCALFALVVMAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADDGRFDVPNDDPFFPDNDVSNTTFGTILGIPI
Ga0070716_10114443723300006173Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFCALFALFAAAPVIFADGPESYSGKKEVMQPAPPVCDFYRAHEWDLGIWGAFAFGSDTGRTDLATDQTD
Ga0070712_10050539623300006175Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFSALFALFAVAPVLFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWAAYAFGDSTGQTDVPNVDP
Ga0066665_1111310413300006796SoilMKKLTLTFCALFALFAVAPAFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAW
Ga0079219_1001078013300006954Agricultural SoilMKKLTLTFCALFALFAATPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWAA
Ga0066709_10358476323300009137Grasslands SoilMKKLTLTFCALFALFVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLGIWG
Ga0066709_10363237923300009137Grasslands SoilMAAGRKSNQGGMMKKLTLTFCALFALLVVAPAYADGPERYSGKEKEVMQPAPPTCDLYRAHEWDLDIWGAYAFAADTGQFDTPNDDPFT
Ga0105242_1196692613300009176Miscanthus RhizosphereMKKLTLTFCALFALFGVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGQFPVDES
Ga0105237_1003769713300009545Corn RhizosphereMKKLTLTFCALFALFAVAPVIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLGIW
Ga0134062_1060375913300010337Grasslands SoilMKKLTLTFCALFALFVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDL
Ga0137391_1096473113300011270Vadose Zone SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAWAFAADSGRFDQPTDAT
Ga0137388_1118331113300012189Vadose Zone SoilMKKLTLTFCALFAFGSAVYAGTEKYSGKEKEVIQPAPPVCELYRAHEWDLSIWGSYAFSANSGSFDVANDDPFSPDTDPFVF
Ga0137365_1080460423300012201Vadose Zone SoilMKKLTLTFCALFALFVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWAAWAFASDTGRFDVDNVDPFSPD
Ga0137363_1085255713300012202Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPF
Ga0137380_1025685833300012206Vadose Zone SoilMKKLTLTFCALFVMFAVAPALFADGPEKYSGKEKEVLQPAPPVCDFYRAHEWDLDLWGSFDYSANSGSFDVPREDPFFPDGDADG
Ga0137381_1006865633300012207Vadose Zone SoilMKKLTLTFCALFALVVAAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDFSIWG
Ga0137379_1040868823300012209Vadose Zone SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAY
Ga0137379_1063724213300012209Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAAD
Ga0137387_1019533813300012349Vadose Zone SoilMKKLTLTFCALFALVVAAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWD
Ga0137386_1010396113300012351Vadose Zone SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFA
Ga0137366_1080863523300012354Vadose Zone SoilMKKLTLTFCALFALVVAPAIYADGPEKYSGKEKEVMQPAPPVCDLYRAHEWDLDIWGAFAFA
Ga0137361_1103243213300012362Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTG
Ga0137390_1068242113300012363Vadose Zone SoilMKKLTLTFCALFALFVVAPALYADAPERYTVKEKEVMQQAPPACDFYRAHEWDLDIWGAYAFAADTGQFDVPNDDPFFPDDDVTNQTTISFLG
Ga0137394_1033119013300012922Vadose Zone SoilMKKLTLTFCALFALFAVAPAFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGSWAFAADSGRFDQPDDPTTSILLV
Ga0137413_1109445513300012924Vadose Zone SoilMKKLTLTFCALIALLVVAPAIYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFGGTTGQNDVP
Ga0137416_1144687113300012927Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDLFFPDTDVTNETITT
Ga0137407_1028099613300012930Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETITTILGIIP
Ga0164305_1121344823300012989SoilMKKLTLTFSALFALFAVAPVLFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWAAYAFGDTTGQTDVPNVDPFTPDDDPFVSAIGGGFVE
Ga0164305_1198380613300012989SoilMKKLTLTFCALFALVVMAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDISIWGAYAFAADTGQRHVPNDDPFVDPNNTTGGETDVTNTTFNFTP
Ga0134075_1020064413300014154Grasslands SoilMKKLTLTFCALFALVVAAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWAAYAFGDTTGQTDVPNVDPFTPDDDPF
Ga0137412_1051037623300015242Vadose Zone SoilMKKLTLTFSALFALLVVTPAIFADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFGGTTGQNDVP
Ga0134072_1000969913300015357Grasslands SoilMKKLTLTFCALFALVVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLGIWAAYAFAADTGQFDVDKVDPFSPDED
Ga0182036_1046123913300016270SoilMKKLTLTFCALIALFAVAPAIFADGPVDSGKKEVMQPAPPVCDFYRAHEWDLDIWGAVAFAADTGEFAHTTDPRSNDPFFPDRDPSTVDLGTG
Ga0187766_1077430413300018058Tropical PeatlandMKKLTLTFCALFALFAAAPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWGAFLFAGDTG
Ga0184618_1047654913300018071Groundwater SedimentMKKLTLTFCALFALVVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGRIDVPNDDPFFPDTDVTNETITTILGIIPVSDV
Ga0066655_1070791523300018431Grasslands SoilMKKLTLTFCALFALVVAAPALYADGPEPSSKEKEVMQPAPPVSAFYRDHEWDLSH
Ga0066669_1167833613300018482Grasslands SoilMKKLTLTFCALFALVVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGRFDVPNDDPFFPDNDVTNSTLVCLLGCPLTFPSTVPWTGRPQ
Ga0137408_104693223300019789Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETITTILGII
Ga0193730_109434613300020002SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAA
Ga0179594_1003362123300020170Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETITTILGIIPV
Ga0210406_1006649613300021168SoilMKKLTLTFCALFALFTAAPAIFADGPEPSGKKEVMQPAPPVCDFYRAHEWDLGIWGAFAFASDSGQFAVPRDDPFVSTV
Ga0210406_1034114013300021168SoilMKKLTLTFCALIALVAVAPALYADDGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGSYAFASDTGQFDVPNEDPWRTTVGNTTFPFDIDPFIFEVSDPT
Ga0210402_1079797223300021478SoilMKKLTLTFCALFALFAAAPAIFADGPEAYSGKKEVMQPAPPVCDFYRAHEWDLSIWAAWAFAADTGH
Ga0207646_1031600413300025922Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFCALFALFGVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAY
Ga0207646_1155134213300025922Corn, Switchgrass And Miscanthus RhizosphereMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADDGRFNVPNDDPFFNPNNTGFQESDVTNETIHTL
Ga0207664_1137870823300025929Agricultural SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDIYRAHEWDLDI
Ga0209802_108567423300026328SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGRF
Ga0209267_127512913300026331SoilMKKLTLTFCALFAFFVVAPAFADGPEPSGKEKEVMQPAPPVCDFYRAHEWDLGIWGAYAFAADTGRFDQETDPEL
Ga0209804_111498723300026335SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDFSIWGAYAFAADTGRIDVPNDDPFFPDTDVT
Ga0257170_104713913300026351SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADDGRFNVPNDDPFFPDDDVSNTTFLSFLGIPLTVLS
Ga0257166_101773813300026358SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGRFDQPTDPNTFIGLGGAD
Ga0257178_103483313300026446SoilMKKLTLTFCALLALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAA
Ga0257159_103288423300026494SoilMKKLTLTFCALFAVFGVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAY
Ga0257156_110915013300026498SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGA
Ga0257168_110786223300026514SoilMKKLTLTFCALFAVFGVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGRFPVDESRNANGDLNA
Ga0209807_121519223300026530SoilMKKLTLTFCALFALFAAAPAIFADGPEAYSGKKEVMQPAPPVCDFYRAHEWNLGIWGAFAFA
Ga0209058_135257413300026536SoilMKKLTLTFCALFALVVAAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDEDVTN
Ga0209056_1059013013300026538SoilMKKLTLTFCALFALVVVTPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDFSIWGAYAFAADTGRIDVPNDDPFFPDTDVTNSTVLTILGFPLTTLSSSE
Ga0209376_134344913300026540SoilMKKLTLTFCALFALLVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETVLSIF
Ga0209805_110769413300026542SoilMKKLTLTFCALFALVVVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGRIDVPNDDPFFPDTDVTNST
Ga0209474_1015252613300026550SoilMKKLTLTFCALSALLVVAPAIYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWD
Ga0209577_1004732433300026552SoilMKKLTLTFCALFALVLVALIAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADT
Ga0209577_1035051113300026552SoilMKKLTLTFCALFALLVVAPAYADGPERYSGKEKEVMQPAPPTCDLYRAHEWDLDIWGAYAFAADTGQFDVPNDD
Ga0209623_101671713300026880Forest SoilMKKLTLTFCALFALFAAAPAIFADGPEAYSGKKEVMQPAPPVCDFYRAHEWDLSIWGAYAFASDTGSFDVPRVDPFS
Ga0209419_106276813300027537Forest SoilMKKLTLTFCAMFVVLTVAPAIYADGPEGKKEVMQPAPPTCELYRAHEWDLDIWGAFM
Ga0209625_105472723300027635Forest SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADDGRNNVPNDDPFFPDNDVSNTTFLSVLGIPLTVLSSS
Ga0209076_109076613300027643Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNSTVLSFLGIPLTTLSSSEPA
Ga0209217_100177663300027651Forest SoilMKKLTLTFCALFALVLVALVAPALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAY
Ga0209217_100386813300027651Forest SoilMKKLTLTFCALFALVLVAPALYADGPERYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAY
Ga0209588_126668313300027671Vadose Zone SoilMKKLTLTFCALFALVVVAPALYADGPERYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAAD
Ga0209626_121611313300027684Forest SoilMKKLTLTFCALFALFAVAPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWGAFAFAADTGSFAAPEFDPFFPDNDPSTVDI
Ga0209488_1009926823300027903Vadose Zone SoilMKKLTLTFCALIALLAAAPAYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAYAFAADTGQFPVDRS
Ga0307308_1038958213300028884SoilMKKLTLTFCALFALVVVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFPDTDVTNETITTILGIIPVSD
Ga0170824_10384034623300031231Forest SoilMKKLTLTFCALFALFAVAAALYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWNLDIWASWSFAADTGHFDVPETDPFTTVGSPFEVDPT
Ga0318541_1084402413300031545SoilMKKLTLTFCVLFALLVVAPAIYADGPERTSGKEKEVMQPAPPVCDFYRAHEWD
Ga0307474_1027041213300031718Hardwood Forest SoilMKKLTLTSCALFALFAVAPALYADDGPEKYSGKEKEVIQPAPPVCDFYRAHEWDFSIWGAYAFASDTGQYAFDNSRFQSGI
Ga0307469_1142420323300031720Hardwood Forest SoilMKKLTLTFCALFALVVMAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFNPNNGTNGFM
Ga0307468_10117102313300031740Hardwood Forest SoilVAPALYADGPEPSSKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGQFNVPNDDPFFNPNNGTNGFM
Ga0307475_1033066723300031754Hardwood Forest SoilMKKLTLTFCALFALVLVAPALYADGPEQYSGKEKEVMQPAPPVCDFYRAHEWDLDIWGAWAFAADTGD
Ga0318551_1062784223300031896SoilMKKLTLTFCVLFALLVVAPAIYADGPERTSGKEKEVMQPAPPVCDFYRAHEWDLGI
Ga0307479_1016746313300031962Hardwood Forest SoilMKKLTLTFCALFALFAAAPAIFADGPEQYSGKKEVMQPAPPVCDFYRAHEWDLSIWGAYAFGSDTGRTDF
Ga0307479_1172262723300031962Hardwood Forest SoilMKNLTLTFCALFASVSALYAGTEKYSGKEKEVMQPAPPVCELYRAHEWDLDLWGTFVFSANSGRNHVSNDDPFSPDSDP
Ga0318507_1020961323300032025SoilMKKLTLTFCVLFALLVVAPAIYADGPERTSGKEKEVMQPAPPVCDFYRAHEWDLGIWGAYAFGGTTGQFDVPNEDPFLT
Ga0307471_10005089213300032180Hardwood Forest SoilMKKLTLTFCALFALFAVAAAIYADGPEKYSGKEKEVMQPAPPVCDFYRAHEWDLSIWGAYAFAADTGR
Ga0318519_1097417413300033290SoilMKKLTLTFCVLFALLVVAPAIYADGPERTSGKEKEVMQPAPPVCDFYRAHEW

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.