Basic Information | |
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Family ID | F092556 |
Family Type | Metagenome |
Number of Sequences | 107 |
Average Sequence Length | 90 residues |
Representative Sequence | MRLVTRLGFVIVAISLAVVSGASHVAAQRQATTTVTRLYTGADGQSHAEDKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASK |
Number of Associated Samples | 86 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 96.26 % |
% of genes near scaffold ends (potentially truncated) | 99.07 % |
% of genes from short scaffolds (< 2000 bps) | 94.39 % |
Associated GOLD sequencing projects | 79 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.37 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.196 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere (7.477 % of family members) |
Environment Ontology (ENVO) | Unclassified (52.336 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (58.879 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 27.27% β-sheet: 21.49% Coil/Unstructured: 51.24% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.37 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF11158 | DUF2938 | 19.63 |
PF02826 | 2-Hacid_dh_C | 3.74 |
PF01872 | RibD_C | 3.74 |
PF00903 | Glyoxalase | 2.80 |
PF00488 | MutS_V | 1.87 |
PF13472 | Lipase_GDSL_2 | 1.87 |
PF08818 | DUF1801 | 1.87 |
PF02452 | PemK_toxin | 1.87 |
PF00561 | Abhydrolase_1 | 1.87 |
PF13276 | HTH_21 | 0.93 |
PF02423 | OCD_Mu_crystall | 0.93 |
PF14319 | Zn_Tnp_IS91 | 0.93 |
PF13302 | Acetyltransf_3 | 0.93 |
PF01494 | FAD_binding_3 | 0.93 |
PF04229 | GrpB | 0.93 |
PF00378 | ECH_1 | 0.93 |
PF13521 | AAA_28 | 0.93 |
PF00160 | Pro_isomerase | 0.93 |
PF09413 | DUF2007 | 0.93 |
PF03972 | MmgE_PrpD | 0.93 |
PF00857 | Isochorismatase | 0.93 |
PF13442 | Cytochrome_CBB3 | 0.93 |
PF04014 | MazE_antitoxin | 0.93 |
PF01433 | Peptidase_M1 | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG0262 | Dihydrofolate reductase | Coenzyme transport and metabolism [H] | 3.74 |
COG1985 | Pyrimidine reductase, riboflavin biosynthesis | Coenzyme transport and metabolism [H] | 3.74 |
COG0249 | DNA mismatch repair ATPase MutS | Replication, recombination and repair [L] | 1.87 |
COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.87 |
COG1193 | dsDNA-specific endonuclease/ATPase MutS2 | Replication, recombination and repair [L] | 1.87 |
COG2337 | mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module | Defense mechanisms [V] | 1.87 |
COG4430 | Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family | Function unknown [S] | 1.87 |
COG5646 | Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis) | Posttranslational modification, protein turnover, chaperones [O] | 1.87 |
COG5649 | Uncharacterized conserved protein, DUF1801 domain | Function unknown [S] | 1.87 |
COG0308 | Aminopeptidase N, contains DUF3458 domain | Amino acid transport and metabolism [E] | 0.93 |
COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.93 |
COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.93 |
COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | Posttranslational modification, protein turnover, chaperones [O] | 0.93 |
COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.93 |
COG1335 | Nicotinamidase-related amidase | Coenzyme transport and metabolism [H] | 0.93 |
COG1535 | Isochorismate hydrolase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.93 |
COG2079 | 2-methylcitrate dehydratase PrpD | Carbohydrate transport and metabolism [G] | 0.93 |
COG2320 | GrpB domain, predicted nucleotidyltransferase, UPF0157 family | General function prediction only [R] | 0.93 |
COG2423 | Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family | Amino acid transport and metabolism [E] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 97.20 % |
Unclassified | root | N/A | 2.80 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000955|JGI1027J12803_103026816 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1 | 694 | Open in IMG/M |
3300000955|JGI1027J12803_105144009 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium | 724 | Open in IMG/M |
3300003994|Ga0055435_10032741 | All Organisms → cellular organisms → Bacteria | 1179 | Open in IMG/M |
3300004114|Ga0062593_102371435 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium | 598 | Open in IMG/M |
3300004463|Ga0063356_103223151 | Not Available | 703 | Open in IMG/M |
3300004463|Ga0063356_106487077 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 501 | Open in IMG/M |
3300004479|Ga0062595_100470702 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 931 | Open in IMG/M |
3300005295|Ga0065707_11160285 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 503 | Open in IMG/M |
3300005332|Ga0066388_108685603 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 505 | Open in IMG/M |
3300005335|Ga0070666_10921154 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 647 | Open in IMG/M |
3300005338|Ga0068868_101126988 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 | 723 | Open in IMG/M |
3300005338|Ga0068868_101477004 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 636 | Open in IMG/M |
3300005343|Ga0070687_100920790 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 628 | Open in IMG/M |
3300005347|Ga0070668_101989961 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 536 | Open in IMG/M |
3300005353|Ga0070669_101021956 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 710 | Open in IMG/M |
3300005353|Ga0070669_101261639 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 639 | Open in IMG/M |
3300005354|Ga0070675_102210070 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 507 | Open in IMG/M |
3300005456|Ga0070678_101210036 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 701 | Open in IMG/M |
3300005456|Ga0070678_102194726 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 524 | Open in IMG/M |
3300005459|Ga0068867_102094439 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300005526|Ga0073909_10472588 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 602 | Open in IMG/M |
3300005539|Ga0068853_100734019 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 943 | Open in IMG/M |
3300005578|Ga0068854_100252769 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1408 | Open in IMG/M |
3300005615|Ga0070702_101053400 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 647 | Open in IMG/M |
3300005615|Ga0070702_101459671 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 561 | Open in IMG/M |
3300005616|Ga0068852_102551678 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 531 | Open in IMG/M |
3300005617|Ga0068859_100404784 | All Organisms → cellular organisms → Bacteria | 1461 | Open in IMG/M |
3300005764|Ga0066903_100979451 | All Organisms → cellular organisms → Bacteria | 1542 | Open in IMG/M |
3300005764|Ga0066903_101956221 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter | 1125 | Open in IMG/M |
3300005764|Ga0066903_106093604 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 631 | Open in IMG/M |
3300005764|Ga0066903_107263472 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 573 | Open in IMG/M |
3300005841|Ga0068863_100855997 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 908 | Open in IMG/M |
3300005841|Ga0068863_102518801 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 524 | Open in IMG/M |
3300006173|Ga0070716_101544222 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 544 | Open in IMG/M |
3300006358|Ga0068871_101278363 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 690 | Open in IMG/M |
3300006358|Ga0068871_101427244 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 653 | Open in IMG/M |
3300006796|Ga0066665_10353213 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1200 | Open in IMG/M |
3300006844|Ga0075428_102480019 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 531 | Open in IMG/M |
3300006853|Ga0075420_101653674 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 548 | Open in IMG/M |
3300009012|Ga0066710_101150536 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1201 | Open in IMG/M |
3300009137|Ga0066709_102669470 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 667 | Open in IMG/M |
3300009137|Ga0066709_103002635 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 619 | Open in IMG/M |
3300009176|Ga0105242_11800562 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 651 | Open in IMG/M |
3300009176|Ga0105242_13094703 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 516 | Open in IMG/M |
3300009177|Ga0105248_10224151 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2116 | Open in IMG/M |
3300009177|Ga0105248_10830952 | All Organisms → cellular organisms → Bacteria | 1043 | Open in IMG/M |
3300009551|Ga0105238_11483944 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 706 | Open in IMG/M |
3300009553|Ga0105249_12829614 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 557 | Open in IMG/M |
3300010043|Ga0126380_10475493 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri | 952 | Open in IMG/M |
3300010359|Ga0126376_10465057 | All Organisms → cellular organisms → Bacteria | 1160 | Open in IMG/M |
3300011119|Ga0105246_10927635 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium | 783 | Open in IMG/M |
3300012202|Ga0137363_11415252 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 585 | Open in IMG/M |
3300012511|Ga0157332_1005788 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1083 | Open in IMG/M |
3300012904|Ga0157282_10042095 | Not Available | 1077 | Open in IMG/M |
3300012971|Ga0126369_10574058 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1195 | Open in IMG/M |
3300013296|Ga0157374_11210735 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 777 | Open in IMG/M |
3300013306|Ga0163162_10385453 | All Organisms → cellular organisms → Bacteria | 1535 | Open in IMG/M |
3300013308|Ga0157375_10114000 | All Organisms → cellular organisms → Bacteria | 2805 | Open in IMG/M |
3300013308|Ga0157375_12534483 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 612 | Open in IMG/M |
3300013308|Ga0157375_12840928 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 579 | Open in IMG/M |
3300013308|Ga0157375_13679662 | Not Available | 510 | Open in IMG/M |
3300014166|Ga0134079_10617796 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3 | 541 | Open in IMG/M |
3300014326|Ga0157380_11507053 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 726 | Open in IMG/M |
3300014969|Ga0157376_10355300 | All Organisms → cellular organisms → Bacteria | 1404 | Open in IMG/M |
3300014969|Ga0157376_11113386 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 816 | Open in IMG/M |
3300014969|Ga0157376_13082644 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 505 | Open in IMG/M |
3300015200|Ga0173480_10017166 | All Organisms → cellular organisms → Bacteria | 2981 | Open in IMG/M |
3300015374|Ga0132255_100095474 | All Organisms → cellular organisms → Bacteria | 4020 | Open in IMG/M |
3300015374|Ga0132255_104090839 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 619 | Open in IMG/M |
3300016371|Ga0182034_11130831 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 680 | Open in IMG/M |
3300016387|Ga0182040_10928216 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 723 | Open in IMG/M |
3300018054|Ga0184621_10270907 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 602 | Open in IMG/M |
3300018083|Ga0184628_10667458 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 520 | Open in IMG/M |
3300018084|Ga0184629_10071280 | All Organisms → cellular organisms → Bacteria | 1642 | Open in IMG/M |
3300018469|Ga0190270_12249603 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 606 | Open in IMG/M |
3300018476|Ga0190274_13350314 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 540 | Open in IMG/M |
3300021080|Ga0210382_10407990 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 601 | Open in IMG/M |
3300021086|Ga0179596_10685464 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 519 | Open in IMG/M |
3300021560|Ga0126371_11438815 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri | 819 | Open in IMG/M |
3300025580|Ga0210138_1095461 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 716 | Open in IMG/M |
3300025903|Ga0207680_10142962 | All Organisms → cellular organisms → Bacteria | 1588 | Open in IMG/M |
3300025907|Ga0207645_10126455 | All Organisms → cellular organisms → Bacteria | 1661 | Open in IMG/M |
3300025923|Ga0207681_11554222 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 554 | Open in IMG/M |
3300025941|Ga0207711_10193445 | All Organisms → cellular organisms → Bacteria | 1854 | Open in IMG/M |
3300025981|Ga0207640_10509406 | All Organisms → cellular organisms → Bacteria | 1004 | Open in IMG/M |
3300026023|Ga0207677_11842958 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 562 | Open in IMG/M |
3300026075|Ga0207708_11527433 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 587 | Open in IMG/M |
3300026089|Ga0207648_10254173 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1567 | Open in IMG/M |
3300026118|Ga0207675_101835584 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 625 | Open in IMG/M |
3300026142|Ga0207698_11232550 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 762 | Open in IMG/M |
3300027910|Ga0209583_10473924 | All Organisms → cellular organisms → Bacteria | 613 | Open in IMG/M |
3300028380|Ga0268265_12090217 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 573 | Open in IMG/M |
3300028381|Ga0268264_12338699 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 541 | Open in IMG/M |
3300028802|Ga0307503_10503207 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 653 | Open in IMG/M |
3300031170|Ga0307498_10258673 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 634 | Open in IMG/M |
3300031226|Ga0307497_10046175 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1504 | Open in IMG/M |
3300031719|Ga0306917_10896571 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3 | 694 | Open in IMG/M |
3300031944|Ga0310884_10035189 | All Organisms → cellular organisms → Bacteria | 2149 | Open in IMG/M |
3300032003|Ga0310897_10264408 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium | 775 | Open in IMG/M |
3300032017|Ga0310899_10085096 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1246 | Open in IMG/M |
3300032017|Ga0310899_10369286 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 681 | Open in IMG/M |
3300032059|Ga0318533_10703198 | All Organisms → cellular organisms → Bacteria | 742 | Open in IMG/M |
3300032180|Ga0307471_103685038 | All Organisms → cellular organisms → Bacteria | 542 | Open in IMG/M |
3300032205|Ga0307472_101991575 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
3300032783|Ga0335079_10179718 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2358 | Open in IMG/M |
3300033550|Ga0247829_11092741 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 662 | Open in IMG/M |
3300034268|Ga0372943_0218823 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1187 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.48% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 7.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 5.61% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.67% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 4.67% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 4.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.67% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.74% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.74% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.74% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.80% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.80% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.80% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.87% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.87% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.87% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.87% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.87% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.87% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.93% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.93% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.93% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.93% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.93% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.93% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300003994 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012511 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10 | Environmental | Open in IMG/M |
3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300025580 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300031170 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
3300034268 | Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI1027J12803_1030268161 | 3300000955 | Soil | MQLFTRLGFVVVVSLAVVLSEGHAAAQKHETTTVTRLYTGTDGQSHAEDTEIAWRPAKLRAELNESESMKVTSAQFLRWPRGFVWEGHPASKRQ |
JGI1027J12803_1051440092 | 3300000955 | Soil | MQLFTRLGFVVVSLAVVLSEGHVAAQKHETTTVTRLYTGTDGQSHAEDTEIAWRPAKLRAELNESESMKVTSAQFLRWPRGFVWE |
Ga0055435_100327413 | 3300003994 | Natural And Restored Wetlands | VKRITRVGFVVILAGLAAVSTASHLAAQRHETTTITRLYTGADGQSHAEDTEVAWRPATLRAELNDSASVRVTAAQFLRWPRGFVWQGHPASK |
Ga0062593_1023714352 | 3300004114 | Soil | MQLFTRLVLVVVLIGLVVVSSAGHVAAQRQVTTTVTRLYTGADGRSHAEDTEVAWRPAKLRPELNESESVKVTAAQFLRWPRGFV |
Ga0063356_1032231512 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MRLFTRLVFVVVVVGLAVVSSASHVAAQRQVTTTVTRLYTGADGQSHAEDIEVAWRPAKLRPELNESESVKVTGAQFL |
Ga0063356_1064870771 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MRLVTRLGFVIVAISLAVVSGASHVAAQRQATTTVTRLYTGADGQSHAEDKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGE |
Ga0062595_1004707021 | 3300004479 | Soil | MKSAIALALLAAVVSSASRIAAQKPDTTNITRLYTAADGQSHAENITVAWRPAKLRAELSESESVKATGA |
Ga0065707_111602852 | 3300005295 | Switchgrass Rhizosphere | MPLFTRLVFVVVLAGLAVVSSASHVAAQRQVTTTITRLYTGADGQSHAEDSAVAWRPAKLRPELNESESVKVTAAQFLRWPRG |
Ga0066388_1086856032 | 3300005332 | Tropical Forest Soil | LQFLIRLGFVVLLASLAVVSSASRTAAQKRATTTVTRLYTGADGQSHADDTEVAWRPAKLRAELSESDSVKVTAAQFLRWPRGFVW |
Ga0070666_109211541 | 3300005335 | Switchgrass Rhizosphere | MQIGTRLAFVVVLTVIASPASHIGAQKQATTTVTRLFTGADGQSHAEDKEVVWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAG |
Ga0068868_1011269881 | 3300005338 | Miscanthus Rhizosphere | MRLFTRLGFVVVVGSLAVVSSASHVAAQKQVTTTITRLYTGADGRSHAQDTAVAWRPAKLRPELNESESVKVTSAQ |
Ga0068868_1014770041 | 3300005338 | Miscanthus Rhizosphere | MRLIIRIALLVALAGLAVVSSPSHVAAQKPVTTTVTRLYTGADDESHAQDNDVAWRTAKLHPDLSESEPVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEV |
Ga0070687_1009207902 | 3300005343 | Switchgrass Rhizosphere | MQLVTRLGFVIVVISLAVVSSAGHLAAQRQATTVTRLYTGADGQSHADEKQVAWRPAKLRAELNESESVKVTGAQFLRWP |
Ga0070668_1019899611 | 3300005347 | Switchgrass Rhizosphere | MQIGTRLAFVVVLTVIASPASHIGAQKQPTTTVTRLYTGADGQSHAEDKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASKRQY |
Ga0070669_1010219562 | 3300005353 | Switchgrass Rhizosphere | MQPFTRLGFVVVLVSLAVVSSASRVLAQKHVTTTVTRLYTGADGQSHAEDTEVAWRPATLRSELNESESVKVTAAQFLRWPRGFVWE |
Ga0070669_1012616392 | 3300005353 | Switchgrass Rhizosphere | MKLITRLGFVVILVSLAVVSSASHVAAQRQVTTTVTRLYTGADGQSHADDIAVAWRPAKLRAELNESEPVKVTAAQFLRWPR |
Ga0070675_1022100701 | 3300005354 | Miscanthus Rhizosphere | MRQFPRLGFVVLAGLAVVSSTSYLAAQKPATTTVTRLYTDSDDQSHAQENDVVWRTARLHPDLSESEAVKVTGAQFLRWPRGFVWAG |
Ga0070678_1012100362 | 3300005456 | Miscanthus Rhizosphere | MQIGTRLAFVVVLTVIASPASHIGAQKQATTTVTRLFTGADGQSHAEDKEVVWRPAKLRAELNESESVKVTGAQFLRWPRGFVW |
Ga0070678_1021947262 | 3300005456 | Miscanthus Rhizosphere | MQLVTRLGFVIVVISLAVVSSAGHLAAQRQATTVTRLYTGADGQSHAEEKEVAWRPAKLRAELNESESVRVTGAQFLRWPRGFV |
Ga0068867_1020944392 | 3300005459 | Miscanthus Rhizosphere | MRLFTRLVFVVVLVSLALVSSASHVAAQRQVTTTVTRLYTGADGQSHAEETEVAWRPARLRPELNESEPVRVTAAQFLRWPRGFVWEGHPASKRQYVIIVSG |
Ga0073909_104725881 | 3300005526 | Surface Soil | MKSAIALALLAAVVSSASRIAAQKPDTTNITRLYTAADGQSHAENITVAWRPAKLRAELSESESAKATGAQFLRWPRGFVWEGHPASKRQYVIIVSGRGEVDV |
Ga0068853_1007340191 | 3300005539 | Corn Rhizosphere | MRLFTRLVFIVALASLAVVSSASRVAAQKPSTTTIARLYTGADGQSHAENSEVAWRPAKLRQELNESESVKVTAAQF |
Ga0068854_1002527692 | 3300005578 | Corn Rhizosphere | VRVKRWLGLVVVLTGLAVVSSASRVVAQRRATTTVTRLYTGGDGQSHAEDIEVAWRPAQLRNELNDSEPVKVTAAQFLRWPRG |
Ga0070702_1010534001 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MRLVTRLGFVIVVISLAVVSSNSHVAAQRQATTVTRLYTGADGQSHAEEKEVAWRPAKLRAELNESESVRVTGAQFLRWPRGFVW |
Ga0070702_1014596712 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MRPRARLAFVIALGVIVSSASQVAAQKQPSTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLRW |
Ga0068852_1025516781 | 3300005616 | Corn Rhizosphere | MRPRARLAFVIALGVIVSSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLR |
Ga0068859_1004047843 | 3300005617 | Switchgrass Rhizosphere | MRLVTRLGFVIVVISLAVVSSNSHVAAQRQATTVTRLYTGADGQSHAEEKQVAWRPAKLRAELNESESVKVTGAQFLRWPRG |
Ga0066903_1009794512 | 3300005764 | Tropical Forest Soil | MQVFTRLRLIVFLVGIALVSNASQIAAQRHETTTITRLYTGADGQSHAEDTDVAWLPSKLRAELNESESMKVS |
Ga0066903_1019562212 | 3300005764 | Tropical Forest Soil | MKQLMRLVFVGLVIGLAVVSSHAVEKRQTIVTRLYTGADGQSHAEPVEVAWRPAALRADLNESAPVKVTGAQFLRWPRGFVWEGHPASKRQY |
Ga0066903_1060936042 | 3300005764 | Tropical Forest Soil | MKFFARLGFIGVLAAFAVVQVAHPAAQKQTTTITRLYTGADSQSHAEDAAIAWRPATLRAELSETAPVKVTAAQFLRWPRGF |
Ga0066903_1072634722 | 3300005764 | Tropical Forest Soil | MQLFTRLGFLVAVSFAVLLTAYSSAAQKHAAAITRLYTGADGQSHADSDIGWRPAKLRAELSESELVKVTSAQFLRWPRGFVWEGHPASKRQYV |
Ga0068863_1008559971 | 3300005841 | Switchgrass Rhizosphere | MRLFPRLGFVVVLFSLAVVSSASHLAGQKPVTTAVTRLYTGADDQSHAEDSDVVWRTAKLHPDLRESESVKVTGAQFLRWP |
Ga0068863_1025188011 | 3300005841 | Switchgrass Rhizosphere | MRLFTRFLFGVVLVSLAVVSSASHVAAQRQVTTTITRLYTGADGQSHADDTEVAWRPAKLRPELNESESIKVTAAQFLRWPRGFVWEGHPASKRQYVIIVSGR |
Ga0070716_1015442221 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MRSSTRRGFLVIVTLAVVSSTAHVAVQKRAPATIVTRLYTGADGQSHAEDTEVAWRPAKLRAELSDSETVKATGAQFLRWPRGF |
Ga0068871_1012783631 | 3300006358 | Miscanthus Rhizosphere | MRLVTRLGFVIVVISLAVVSSNSHVAAQRQATTVTRLYTGADGQSHAEEKEVAWRPAKLRAELNESEPVKVTGAQFLRW |
Ga0068871_1014272441 | 3300006358 | Miscanthus Rhizosphere | MRLLTRFVFGVVLVSLAVVSSASHVAAQRQVTTTITRLYTGADGQSHADDTEVAWRPAKLRPELNESESIKVTAAQFLRWPRGFVWEGHPASKRQYVIIVSGRGE |
Ga0066665_103532131 | 3300006796 | Soil | MIMKPLTRLGFLVILGSLAVVSTASHLAAQRRATTTVTRLYTGADGQSHADDAGVAWRPAKLHAELSESESVKVTAAQFLRWPRGFVWEGHPAS |
Ga0075428_1024800191 | 3300006844 | Populus Rhizosphere | MRFITRLGFLILIGLSIVSSASRVAAQAPATTVTRLFTGADGQSHAEDTVIAWRPAKLRAELNESESMKVTGAQFLRWPRGF |
Ga0075420_1016536742 | 3300006853 | Populus Rhizosphere | MRFITRLGFLILIGLSIVSSASRVAAQAPATTVTRLFTGADGQSHAEDTVIAWRPAKLRAELNESESMKVTGAQFLRWP |
Ga0066710_1011505363 | 3300009012 | Grasslands Soil | MNLITRLGFVVILVSLAVVSSASHVAAQRHLTTTITRLYTGADGQSHADDTEVAWRPAKLRAELNESESVKVTAAQFLRWPR |
Ga0066709_1026694701 | 3300009137 | Grasslands Soil | MASLMQLFMRLGFIVILVGLALVPSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEIAWRPATLHAALNESPSVKVTGAQFLRWPRGFVWAGH |
Ga0066709_1030026351 | 3300009137 | Grasslands Soil | MIMKLLTRLGFLVILGSLAVVSTASHLAAQRRATTTVTRLYTGADGQSHADDAGVAWRPAKLHAELSESESVKVTAAQFLRWPRGFVWQGHPASKRQYVIIISGRGEVD |
Ga0105242_118005621 | 3300009176 | Miscanthus Rhizosphere | MRLFARLVFVVVLVGLAVASSASHVAAQRQATTTVTRLYTGADGQSHAEDTEVAWQPAQLRPELNESESVKVTAAQFLRWPRGFVWEGH |
Ga0105242_130947031 | 3300009176 | Miscanthus Rhizosphere | MQPFTRLGFVVVLVSLAVVSSASRVLAQKHVTTTVTRLYTGADGQSHAEDTEVAWRPATLRSELNESESVKVTAAQFLRWPRGFVWEGHPASKRQYVIIVSGRG |
Ga0105248_102241511 | 3300009177 | Switchgrass Rhizosphere | MRLIIRIALLVALAGLAVVSSPSHLAAQKLVTTTVTRLYTGADDQSHAQDNDVAWRTAKLHPDLSESEPVKVTGAQFLRWPR |
Ga0105248_108309523 | 3300009177 | Switchgrass Rhizosphere | MRPITRIVLVVIVAALPVVSSPSHAAAQKPVAMTVTRLYTGADEESHAQDVDVTWRTAKLHPDLRESEPVKVTGAQFLRWPRGFVWAGHP |
Ga0105238_114839442 | 3300009551 | Corn Rhizosphere | MRQFPRLGFVVLAGLAVVSSTSYLAAQKPATTTVTRLYTDADDQSHAQDNDVVWRTARLHPDLSESEAVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEVDVVGG |
Ga0105249_128296142 | 3300009553 | Switchgrass Rhizosphere | MTPFTRIGFVVAVSLAVVSSASHVAAQRNVTTTVTRLFTGADGESHAEDSEIAWRPAALRAELKESEPVKVTGAQFLRWPRGFVWAGHPASKRQ |
Ga0126380_104754931 | 3300010043 | Tropical Forest Soil | MPRLIRLLFVSVVSGALMSSASHVAAQKPATTTVTRLYTDADGQSHAEDTDVVWRPAKLRAELSESESVKVTAAQFLRWPRGFVWEGHPASKRQYVVIVSGRGEVDVA |
Ga0126376_104650573 | 3300010359 | Tropical Forest Soil | MKPITRLAFAVALVSLPIVSSATRVSSQSHARMIVTRLSTGADGLSHAEDTQVAWEPAKLRAELSESAAVKATGAQFLRWPRGFVWADHPASKRQYVIIV |
Ga0105246_109276351 | 3300011119 | Miscanthus Rhizosphere | MQLFTRLVLVVVFVGLVVVSNAGHVAAQRQVTTTVTRLYTGADGQSHAEDSAVAWRPAKLRPELNESESVKVTAAQFL |
Ga0137363_114152522 | 3300012202 | Vadose Zone Soil | MRLLTRLVFVVLVSLAVVSSASHAAAQRQATTTITRLYTGADGQSHADDADVAWRPAKLRAELDESESVKVTAAQFLRWPRGFVWEGHPASKRQYVIIVSGRGEVDGVGG |
Ga0157332_10057882 | 3300012511 | Soil | MFVVVVGFAVVAGASHVAAQRNETTTITRLYTGADGESHADETEVAWRPAKLRAELKESESVNVTGAQFLRWPRGFVWAGHPASK |
Ga0157282_100420952 | 3300012904 | Soil | MFVVVVGFAVMAGASHVAAQRNETTIITRLYTGADGESHADETEVAWRPAKLRAELKESESVNVTGAQFLRWPR |
Ga0126369_105740581 | 3300012971 | Tropical Forest Soil | MRQVRFAFIIVLLGLPIVASAGRLSAQSHVTTTITRLYTGADGQSHAEDTEVAWRPAKLRPELSDSASVNVTSAQFLRWPRGFVWAGHPASKRQYVIIVSG |
Ga0157374_112107351 | 3300013296 | Miscanthus Rhizosphere | MRLFPRLGFVVVLFSLAVVSSASHLAGQKPVTTAVTRLYTGADDQSHAEDSDVVWRTAKLHPDLRESESVKVTGAQFLRWPRGF |
Ga0163162_103854531 | 3300013306 | Switchgrass Rhizosphere | MRLIIRIALLVALAGLAVVSSPSHVAAQKPVTTTVTRLYTGADDESHAQDNDVAWRTAKLHPELSESESVKVTGAQFLRWPRG |
Ga0157375_101140001 | 3300013308 | Miscanthus Rhizosphere | MQLVTRLGFVIVVISLAVVSSAGHLAAQRQATTVTRLYTGADGQSHAEEKEVAWRPAKLRAELNESESVRVTGAQFLRWPRGFVWAGHPASKRQYV |
Ga0157375_125344831 | 3300013308 | Miscanthus Rhizosphere | MHLFTRLGFVVALVSLAVVWSASRVAAQSQTTTVTLLYTGVDGQSHAEDSEVAWRPAKLRADLHESESVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEVDVVGGKKVQLAPGRVLL |
Ga0157375_128409282 | 3300013308 | Miscanthus Rhizosphere | MFVVVVGFAVMAGASHVAAQRNETTTITRLYTGADGESHTDETEVAWRPAKLRAELKESESVNVTGAQFLRWPRGFVWAGHPASK |
Ga0157375_136796621 | 3300013308 | Miscanthus Rhizosphere | MRPITRIVLVVIVAALPVVSSPSHAAAQKPVAMTVTRLYTGADEESHAQDVDVTWRTAKLHPDLRESEPVKVTGAQFLRW |
Ga0134079_106177961 | 3300014166 | Grasslands Soil | MSGTRFGFALLGLAVISSPGHVAAQTHETTIVTRLYTGADGLSHAEDIQVVWRTAKLRQELSEAEATKVTGAQFLRWPRGFVWAGHPASKRQY |
Ga0157380_115070531 | 3300014326 | Switchgrass Rhizosphere | MKLITRLGFVVILVSLAVVSSASHVAAQRQVTTTVTRLYTGADGQSHADDIEVAWRAAKLRPELNESESVKVTAAQFLRWPRGFVWE |
Ga0157376_103553004 | 3300014969 | Miscanthus Rhizosphere | MRPITRIVLVVIVAALPVVSSPSHAAAQKSVAMTVTRLYTGADEESHAQDVDVTWRTAKLHPDLRESEPVKVTGAQFLRWPRGFVWAGHPASKR |
Ga0157376_111133861 | 3300014969 | Miscanthus Rhizosphere | MKSAIALALLAAFVSSASRIAAQKPDTTHVTRLYTAADGQSHAEDITVAWRPAKLRAELSESQSVKATGAQFLRWPRGFVWEGHPASKRQYVIIVSGR |
Ga0157376_130826441 | 3300014969 | Miscanthus Rhizosphere | MRLFTRFLFGVVLVSLAVVSSASHVAAQRQVTTTITRLYTGADGQSHADDTEVAWRPAKLRPELNESESIKVTAAQFLRWPRGFVWEGHPASKRQYVIIV |
Ga0173480_100171665 | 3300015200 | Soil | VLIEGEESDMRPRARLAFVIALGVIVSSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLRWPRGFVWAGHPASKRQYVIIVS |
Ga0132255_1000954745 | 3300015374 | Arabidopsis Rhizosphere | MQLITRLGLVVVLLSLSTVSSAGRVAAQRRVSTTITRLYTGIDAQSHAEDIEVAWRPAKLRAELNDSESVKVTS |
Ga0132255_1040908391 | 3300015374 | Arabidopsis Rhizosphere | MQLIARLLFAGVLVTLVMASSAGHVAAQRHATTTVARLYTGADGQSHAEDIEVAWRPARLRAELRDSESVQVTSAQFLPWPRGRVVRNSTPFPGQFNQPH |
Ga0182034_111308311 | 3300016371 | Soil | MRQFRFAFIMVLFSLSVVASADRVSAQSHVTTTITRLYTGADGQSHAEDTEVAWRPAKLRPELSDSASVNVTSAQFLRWPRGFVWAGHPASKRQYVIIVSGR |
Ga0182040_109282161 | 3300016387 | Soil | MQKTHSMIRLVVDRIAVVVSLACLTTLSSTSRVGAQKPETTIVTRLYTGTDGQSHAEDTEVAWRPAALRAELSESASTKVTAAQFLRWPRGFVWAEHPASKRQYVII |
Ga0184621_102709071 | 3300018054 | Groundwater Sediment | MRLFTRLMFVVALVSLAVVSSASHVAAQGQVTTTVTRLYTGADGQSHAEDTEVAWRPAKLRRELTESESVKVTAAQFLRWPRGFVWEGHPASKR |
Ga0184628_106674582 | 3300018083 | Groundwater Sediment | MRLVTRLGFVIVVISLAVVSSTSHVAAQRQATTVTRPYTGADGQSHAMDTEVAWRPARLRAELNESESVKVTAAQFLRWPRGFVWEGHPASKRQYVIIVSGRGEVEVVGGEK |
Ga0184629_100712801 | 3300018084 | Groundwater Sediment | MQLFTRLGFAVVLVSLAVASSASHVAAQRPATTTITRLYTGTDGQSHAEDNAVAWRPAKLRAELNESEPVKVSAAQFLRWPRGFVWAGHPASKRQYVVIVSGRGEVDVVG |
Ga0190270_122496031 | 3300018469 | Soil | MRLVTRLGFVIVVISLAVVSSASHVAAQRQATTTVTRLYTGGDGQSHAEEKEVAWRPAKLRAELNESESVKVTGAQF |
Ga0190274_133503142 | 3300018476 | Soil | MRQVTRLGFVIALGVIVSSASHVAAQKQPTTTVTRLYTGADGQSHAEEKEVAWRPAKLRTELNESESVKVTGAQFLRW |
Ga0210382_104079901 | 3300021080 | Groundwater Sediment | MRLFTRLMFVVILVSLAVVSSASHIAAQRQATTTITRLYTGADGQSRAEDTEVAWRPAKLRAELNESESVKVTAAQFLRWPRGFVWEGHPASKRQ |
Ga0179596_106854642 | 3300021086 | Vadose Zone Soil | MRLFTRLLFVVVLVSLAVVSSASRAAAQRHVTTTITRLYTGADGQSHAEDTEVAWRPANLRPELNESEPVKVAAAQFLRWPRGFVWKGHP |
Ga0126371_114388152 | 3300021560 | Tropical Forest Soil | MPRLIRLLFVSVVGGALMWSVSHVAAQKPATTTVTRLYTDADGQSHAEDADVVWRPAKLRAELSESESVK |
Ga0210138_10954611 | 3300025580 | Natural And Restored Wetlands | MRSGTLTLVIVLAVIVSAGSRADAQKPSTTTVTRLYTGTDGQSHAEDIEVTWRPARLRAELKESESVKVTGAQFL |
Ga0207680_101429623 | 3300025903 | Switchgrass Rhizosphere | MRQFPRLGFVVLAGLAVVSSTSYLAAQKPATTTVTRLYTDSDDQSHAQENDVVWRTARLHPDLSESEAVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRG |
Ga0207645_101264554 | 3300025907 | Miscanthus Rhizosphere | MRPAMRIGFVIVLGAIVSSASQVAAQKQPTTVTRLYTGADGQSHAEDKDIAWRPAKLRADLSESESVKVTGAQFLRWPRGFVWAGHPASKRQYVIIISGRGEVD |
Ga0207681_115542222 | 3300025923 | Switchgrass Rhizosphere | MQIGTRLAFVVVLTVIASPASHIGAQKQATTTVTRLFTGADGQSHAEDKEVVWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASQR |
Ga0207711_101934451 | 3300025941 | Switchgrass Rhizosphere | MRLIIRIALLVALAGLAVVSSPSHLAAQKLVTTTVTRLYTGADDQSHAQDNDVAWRTAKLHPDLSESEPVKVTGAQFLRWPRGFVWAGH |
Ga0207640_105094061 | 3300025981 | Corn Rhizosphere | VRVKRWLGLVVVLTGLAVVSSASRVVAQRRATTTVTRLYTGGDGQSHAEDIEVAWRPAQLRNELNDSEPVKVTAAQFLR |
Ga0207677_118429581 | 3300026023 | Miscanthus Rhizosphere | MRLFARLVFVVVLVGLAVVSSASHVAAQRQATTTVTRLYTGADGQSHAEDTEVAWRPAQLRPELNESESVKVTAAQFL |
Ga0207708_115274331 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MRPRARLAFVIALGVIVSSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLRWPRGF |
Ga0207648_102541733 | 3300026089 | Miscanthus Rhizosphere | MRLVTRLGFVIVVISLAVVSSNSHVAAQRQATTVTRLYTGADGQSHAEEKQVAWRPAKLRAELNESESVRVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEV |
Ga0207675_1018355841 | 3300026118 | Switchgrass Rhizosphere | MRLVTRLGFVIVVISLAVVSSAGHLAAQRQATTVTRLYTGADGQSHAEEKEVAWRPAKLRAELNESESVRV |
Ga0207698_112325503 | 3300026142 | Corn Rhizosphere | MGSLRLRFSWRIGVTGLRGMFVVVVGFAVMAGASHVAAQRNETTTITRLYTGADGESHADETEVAWRPAKLRAELKESESVNVTGAQFLRWPRGFVWAGHPASKR |
Ga0209583_104739242 | 3300027910 | Watersheds | MRLFTRLVFVVVLVSLAVVSSASHVAAQRSVTTTVTRLYTGADGQSHAEDTEVAWRPATLRPELNESEPVKVT |
Ga0268265_120902172 | 3300028380 | Switchgrass Rhizosphere | MRPRARLAFVIALGVIVSSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLRWPRGFVWAGHPASKRQYVIIISG |
Ga0268264_123386991 | 3300028381 | Switchgrass Rhizosphere | MRPRARLAFVIALGVIVSSASQVAAQKQPTTTVTRLYTGADGQSHAEDTEVAWRPARLRAELNESESVMVTGAQFLRWPRGFVWAGHPASK |
Ga0307503_105032071 | 3300028802 | Soil | MRLVTRLGFVIVVISLAVVSSTSHVAAQRQATTVTRLYTGADGQSHAEEKQVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEV |
Ga0307498_102586731 | 3300031170 | Soil | MRLFTRLGFVVALSGLAVVSSPGHVAAQKPVTTTVTRLYTGADSESHAQDNDVTWRTAKLHPDLRESESVKVTGAQFLRWPRGFVWAGHPASKRQYVIIVSGRGEVDVVG |
Ga0307497_100461754 | 3300031226 | Soil | MRLVTRLGLVIVVISLAVVSSASHVAAQRQATTTVTRLFTGGDGQSHAEEKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGH |
Ga0306917_108965712 | 3300031719 | Soil | MVRKTLLVSIAVLAVAMSATGQSKPTTTTITRLYTGADGQSHAADTAVAWRPAKLRAELSESESVKVTGAQFLRWPRGFVWEGHP |
Ga0310884_100351891 | 3300031944 | Soil | MGSLRLRFSWRIGVTGLRGMFVVVVGFAVVAGASHVAAQRNETTTITRLYTGADGESHADETEVAWRPAKLRAELKESESVNVTGAQFLRWPRGFVWAGHPASKRQYVII |
Ga0310897_102644081 | 3300032003 | Soil | MRLVTRLGFVIVAISLAVVSGASHVAAQRQATTTVTRLYTGADGQSHAEDKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASR |
Ga0310899_100850961 | 3300032017 | Soil | MRLVTRLGFVIVAISLAVVSGASHVAAQRQATTTVTRLYTGADGQSHAEDKEVAWRPAKLRAELNESESVKVTGAQFLRWPRGFVWAGHPASK |
Ga0310899_103692862 | 3300032017 | Soil | MTPFTRIGFVVAVSLAVVSSASHVAAQRNVTTTVTRLFTGADGESHAEDSEIAWRPAALRAELKESEPVKVTGAQFLRWPRGFVWAGH |
Ga0318533_107031983 | 3300032059 | Soil | MRQFRFAFIMVLFSLSVVASADRVSAQSHVTTTITRLYTGADGQSHAEDTEVAWRPAKLRPELSDSASVNVTSAQFLRWPRGFVWAGHPASTRQYVIIVS |
Ga0307471_1036850381 | 3300032180 | Hardwood Forest Soil | MPRLTRLGFVLLLLAAVSSVSDIAAQKGATTAVTRLYTGADGQSHAEDVQVAWRPAKLRTELSESESVKVTGA |
Ga0307472_1019915752 | 3300032205 | Hardwood Forest Soil | MRIFTRLGFVFVLASLAVVSSASHVAAQRRVTTTITRLYTGADGQSHGEDTEVAWRPAKLHAELNESESVKATAAQFLRW |
Ga0335079_101797185 | 3300032783 | Soil | VRLIIRVGLAVVISLAIASSADRLAAQKPATTTVTRLYTGADGQSHATDTRVVWRPAQLRADLSESESVKVTGAQFLRWPRGFVWGGHPA |
Ga0247829_110927412 | 3300033550 | Soil | MRLVTRLGFVIVVISLAVVSSASDVAAQRQATTTVTRLYTGGDGQSHAEEKEVAWRPAKLRAELTESESVKVSGAQFL |
Ga0372943_0218823_897_1187 | 3300034268 | Soil | MRQFTRLMFAVVLVSLAAVSTPSRAAAQRQAMMTITRLYTGTDGQSHAEDTGIPWRPAKLHPQLSESESVKVTGAQFLRWPRGFVWEGHPASKRQYV |
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