Metagenome / Metatranscriptome Family F092493

Basic Information
Family ID	F092493
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	102 residues
Representative Sequence	ADPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Number of Associated Samples	99
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	98.13 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (86.916 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (42.991 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.467 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.12% β-sheet: 0.00% Coil/Unstructured: 43.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00483	NTP_transferase	42.06
PF01965	DJ-1_PfpI	16.82
PF13278	Obsolete Pfam Family	7.48
PF00248	Aldo_ket_red	1.87
PF00498	FHA	0.93
PF04138	GtrA	0.93
PF01709	Transcrip_reg	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.37 %
Unclassified	root	N/A	13.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	78.50 %
Unclassified	root	N/A	13.08 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	17.76 %
Unclassified	root	N/A	13.08 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	17.76 %
Unclassified	root	N/A	13.08 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	17.76 %
Unclassified	root	N/A	13.08 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	17.76 %
Unclassified	root	N/A	13.08 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	17.76 %
Unclassified	root	N/A	13.08 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y01BCAPC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300000891\|JGI10214J12806_10500769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	933	Open in IMG/M
3300000956\|JGI10216J12902_105837833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300002568\|C688J35102_120395235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300003152\|Ga0052254_1036080	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300004081\|Ga0063454_101313331	Not Available	606	Open in IMG/M
3300004114\|Ga0062593_103354368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300004463\|Ga0063356_103061937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	720	Open in IMG/M
3300004479\|Ga0062595_101731991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005174\|Ga0066680_10801077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005337\|Ga0070682_100060127	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300005347\|Ga0070668_101271084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300005354\|Ga0070675_101288580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300005364\|Ga0070673_102302203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	512	Open in IMG/M
3300005366\|Ga0070659_101685934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005456\|Ga0070678_100112744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2130	Open in IMG/M
3300005457\|Ga0070662_101204954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	651	Open in IMG/M
3300005459\|Ga0068867_102265756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300005526\|Ga0073909_10298269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300005548\|Ga0070665_101161607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	783	Open in IMG/M
3300005578\|Ga0068854_100160383	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300005598\|Ga0066706_11089357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300005840\|Ga0068870_11102630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300005844\|Ga0068862_102586784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300005886\|Ga0075286_1020507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	830	Open in IMG/M
3300006175\|Ga0070712_100340975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300006605\|Ga0074057_11997147	Not Available	961	Open in IMG/M
3300006794\|Ga0066658_10830236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300006845\|Ga0075421_101646418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	696	Open in IMG/M
3300006854\|Ga0075425_100476158	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300006903\|Ga0075426_11449643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300007076\|Ga0075435_100611862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	945	Open in IMG/M
3300009089\|Ga0099828_11680257	Not Available	559	Open in IMG/M
3300009090\|Ga0099827_11265194	Not Available	642	Open in IMG/M
3300009094\|Ga0111539_10496787	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300009098\|Ga0105245_10932389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	911	Open in IMG/M
3300009098\|Ga0105245_12231470	Not Available	601	Open in IMG/M
3300009137\|Ga0066709_103260359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	591	Open in IMG/M
3300009148\|Ga0105243_10160778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1936	Open in IMG/M
3300009148\|Ga0105243_11803980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	643	Open in IMG/M
3300009162\|Ga0075423_11201077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	809	Open in IMG/M
3300009176\|Ga0105242_10876344	Not Available	895	Open in IMG/M
3300009176\|Ga0105242_12287760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300009177\|Ga0105248_12682272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	568	Open in IMG/M
3300009551\|Ga0105238_11578841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	686	Open in IMG/M
3300009553\|Ga0105249_12653301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300010337\|Ga0134062_10669244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300010401\|Ga0134121_11933844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300012184\|Ga0136610_1334511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300012185\|Ga0136619_10058537	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300012208\|Ga0137376_10568102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300012355\|Ga0137369_10875025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300012356\|Ga0137371_10939813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300012510\|Ga0157316_1085059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300012907\|Ga0157283_10054536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300012955\|Ga0164298_10582233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300012957\|Ga0164303_10082384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1539	Open in IMG/M
3300012958\|Ga0164299_10382034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300012960\|Ga0164301_11093501	Not Available	633	Open in IMG/M
3300012961\|Ga0164302_11514906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300012985\|Ga0164308_10924383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300012985\|Ga0164308_11986201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300012987\|Ga0164307_10448228	Not Available	963	Open in IMG/M
3300013026\|Ga0170681_1074220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300013297\|Ga0157378_12202445	Not Available	602	Open in IMG/M
3300013306\|Ga0163162_10664616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300013306\|Ga0163162_12961399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	546	Open in IMG/M
3300014969\|Ga0157376_10519941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300015357\|Ga0134072_10437252	Not Available	524	Open in IMG/M
3300018078\|Ga0184612_10349023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300019865\|Ga0193748_1026413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300020080\|Ga0206350_10015137	All Organisms → cellular organisms → Bacteria → Terrabacteria group	742	Open in IMG/M
3300020202\|Ga0196964_10527025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300024254\|Ga0247661_1009645	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300024317\|Ga0247660_1057261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300024331\|Ga0247668_1052270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300025916\|Ga0207663_10633203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300025917\|Ga0207660_11031123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300025917\|Ga0207660_11400833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300025925\|Ga0207650_11501903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300025932\|Ga0207690_11481870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300025936\|Ga0207670_10634844	Not Available	879	Open in IMG/M
3300025937\|Ga0207669_11755668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300025941\|Ga0207711_11740269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	567	Open in IMG/M
3300025949\|Ga0207667_12088150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300026067\|Ga0207678_10148759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1999	Open in IMG/M
3300026067\|Ga0207678_11489254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300026142\|Ga0207698_12476207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300026331\|Ga0209267_1227197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300028379\|Ga0268266_10973144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	821	Open in IMG/M
3300028381\|Ga0268264_11508559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	683	Open in IMG/M
3300028721\|Ga0307315_10033863	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1376	Open in IMG/M
3300028722\|Ga0307319_10135206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300028755\|Ga0307316_10148629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	834	Open in IMG/M
3300028784\|Ga0307282_10105868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300028787\|Ga0307323_10110228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	988	Open in IMG/M
3300028791\|Ga0307290_10367363	Not Available	526	Open in IMG/M
3300028793\|Ga0307299_10269642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	639	Open in IMG/M
3300028807\|Ga0307305_10279056	Not Available	762	Open in IMG/M
3300028824\|Ga0307310_10403302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300028824\|Ga0307310_10698482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300028828\|Ga0307312_10710331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300028878\|Ga0307278_10385034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300028885\|Ga0307304_10423456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300031858\|Ga0310892_11233968	Not Available	534	Open in IMG/M
3300031901\|Ga0307406_11556277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300032256\|Ga0315271_11621468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.88%
Host-Associated	Host-Associated	40.19%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.21%
Plants	Host-Associated → Plants	40.19%
Aquatic	Environmental → Aquatic	4.67%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.21%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Sediment	Environmental → Aquatic → Sediment	0.93%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.28%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013026	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_04992830	2170459019	Switchgrass, Maize And Mischanthus Litter	VRLPLRHGDRIGFGSEHVVFSWPEGLADADKTTPIETLPPLLSRPLSPFQAQVVRCLCAGWLQGGSLDELPSNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCRVARQRGWI
JGI10214J12806_105007692	3300000891	Soil	ADPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10216J12902_1058378331	3300000956	Soil	FLNGSRIQAGAKVPLRHGDRIGLGAESVVFSAPDSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
C688J35102_1203952352	3300002568	Soil	APDSLTDPEVTTALQTGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0052254_10360802	3300003152	Sediment	SPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYSKRRALCKIARQRGWV*
Ga0063454_1013133312	3300004081	Soil	LTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0062593_1033543682	3300004114	Soil	PFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0063356_1030619372	3300004463	Arabidopsis Thaliana Rhizosphere	AGSKVPLRHGDRIGLGAESVVFSAPASLIDPEVTTALQAGPPAMTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0062595_1017319911	3300004479	Soil	IQAGAKVPLRHGDRIGLGAESVVFSAPDSLVDPDVTTALQTGPPAMTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066680_108010772	3300005174	Soil	PEVTTALQTGPPALTRPLSPFQRQVVEVLCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0070682_1000601275	3300005337	Corn Rhizosphere	TFLNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070668_1012710841	3300005347	Switchgrass Rhizosphere	PESMIDPEVTTALQTGPPAMTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070675_1012885801	3300005354	Miscanthus Rhizosphere	GSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070673_1023022031	3300005364	Switchgrass Rhizosphere	MTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070659_1016859341	3300005366	Corn Rhizosphere	TFVNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070678_1001127444	3300005456	Miscanthus Rhizosphere	VSPRVRPESRLSPLQAQVVRVLCEEWVASGSLERVPTNDEIADRLGTPGATGTVKAALRRAYAKAGLSDLPAQAKRRALCRVAHERGWI*
Ga0070662_1012049541	3300005457	Corn Rhizosphere	RHGDRIGLGAESVVFSAPGSLADPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0068867_1022657561	3300005459	Miscanthus Rhizosphere	RPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0073909_102982691	3300005526	Surface Soil	DPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAGRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0070665_1011616071	3300005548	Switchgrass Rhizosphere	PLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0068854_1001603831	3300005578	Corn Rhizosphere	FLNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066706_110893572	3300005598	Soil	TDRTETAPELPVGVSRALSPLQVQVVGCLCRAWLEGGTLEHLPSNEEIAAELGTPGAAGTVKAALRRAYAKAGVTDLPAHEKRRALCRIARQRGWI*
Ga0068870_111026301	3300005840	Miscanthus Rhizosphere	PLRHGDRIGLGAESVVFSAPDSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0068862_1025867841	3300005844	Switchgrass Rhizosphere	TALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075286_10205072	3300005886	Rice Paddy Soil	GLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEVLCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0070712_1003409752	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0074057_119971471	3300006605	Soil	FQRQVVEALCSGWLACGSRDDLPTNEEIAGRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0066658_108302361	3300006794	Soil	DPDRTTPLDEAPPTLLRPLSPFQQQVVRALCEAWLSGGSLEDLPSNEEIAARLGTPGATETVKAALRRAYAKAGLTSGSPYAKRRALCKIARQRGWV*
Ga0075421_1016464182	3300006845	Populus Rhizosphere	SLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075425_1004761583	3300006854	Populus Rhizosphere	QRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075426_114496432	3300006903	Populus Rhizosphere	LVFSCPAQLEDPDRTTPLDEAPPALVRALSPFQQQVVRALCEGWLAGGSLDDLPSNEEIAARLGTPGATETVKAALRRSYAKAGLTSGSPYAKRRALCKIARQRGWV*
Ga0075435_1006118622	3300007076	Populus Rhizosphere	LGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0099828_116802572	3300009089	Vadose Zone Soil	SPFQRQVVEALCSAWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0099827_112651942	3300009090	Vadose Zone Soil	VTTALQTGPPALTRPLSPFQRQVVEALCSAWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0111539_104967871	3300009094	Populus Rhizosphere	IQAGSKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105245_109323891	3300009098	Miscanthus Rhizosphere	RIGLGAESVVFSAPESAIDPEVTTALQAGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105245_122314701	3300009098	Miscanthus Rhizosphere	PALTRPLSPFQRQVVEALCSGWLAGGSLDELPTNEEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066709_1032603591	3300009137	Grasslands Soil	PGSLIDPEVTTALQTGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0105243_101607784	3300009148	Miscanthus Rhizosphere	FSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105243_118039802	3300009148	Miscanthus Rhizosphere	VVFSAPASLIDPEVTTALQAGPPAMTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075423_112010771	3300009162	Populus Rhizosphere	KVPLRHGDRIGLGAASVVFSAPGSLVDPEVTTALQTGPPALTRPVSPLQRQLVVALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105242_108763441	3300009176	Miscanthus Rhizosphere	LQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105242_122877602	3300009176	Miscanthus Rhizosphere	FINGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105248_126822721	3300009177	Switchgrass Rhizosphere	PLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105238_115788412	3300009551	Corn Rhizosphere	EVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105249_126533011	3300009553	Switchgrass Rhizosphere	LRHGDRIGLGAESVVFSAPDSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0134062_106692442	3300010337	Grasslands Soil	PLSPLQLQVVRLLAEPWLEGGTLDQLPSNEEIAAKLGTPGAAGTVKAALRRAYAKAGVSNLPAHAKRRALCRIARERGWI*
Ga0134121_119338442	3300010401	Terrestrial Soil	GSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0136610_13345111	3300012184	Polar Desert Sand	DQERTESFDEVEPRFERALSPLQVRVVKLLCGPWIAGESLDRLPSNEEIAAELGTPGAAETVKAALRRAYAKAGLSHLPAHAKRRALCRVARQRGWI*
Ga0136619_100585373	3300012185	Polar Desert Sand	RTNEFDAIEPRTIELTPFQLQLVRALCGAWIGARSLDRMPTNEEIAAYLGTPDAVGSVKAGLRRTYAKAGLSELPPHAKRRALCRLGRAYGWF*
Ga0137376_105681024	3300012208	Vadose Zone Soil	QELPVGRPLSPLQLQVVRLLAEPWLEGGTLDQLPSNEEIAAKLGTPGAAGTVKAALRRAYAKAGVSNLPAHAKRRALCRIARERGWI*
Ga0137369_108750251	3300012355	Vadose Zone Soil	PAMTRPLSPFQRQVVEALCSAWLAGGSLDELPSNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0137371_109398132	3300012356	Vadose Zone Soil	SAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSPWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0157316_10850592	3300012510	Arabidopsis Rhizosphere	RPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0157283_100545361	3300012907	Soil	HGDRIGLGAESVVFSAPESMIDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164298_105822332	3300012955	Soil	HDLDRIGLGAESVVFSAPGSLVDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164303_100823841	3300012957	Soil	TESEETVFPRAQPESRLSPLQAQVVRVLCEEWVASGSLERVPTNDEIADRLGTPGATGTVKAALRRAYAKAGLSDLPSQAKRRALCRVAHERGWI*
Ga0164299_103820341	3300012958	Soil	AGETVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164301_110935011	3300012960	Soil	EVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164302_115149061	3300012961	Soil	GGRIGLGAERVVSSAPGSLVDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164308_109243832	3300012985	Soil	LRHGDRIGLGAESVVFSAPGSLIDPEVTTALQVGRPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0164308_119862011	3300012985	Soil	PGVRLPLRHGDRIGFGKTHVVFSWPSALSDPDKTTALDEIVPPITRPLSPFQKQVVDCLCTNWLAGGSLDELPSNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0164307_104482281	3300012987	Soil	PPALTRPLSPFQRPVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0170681_10742201	3300013026	Rock	QLDDPDRTEPHEQLIGADAKLSSLQLQVVKCLCAPWVDGGRLDELPSNDEIAARLGTPGSAETVKAALRRAYAKVGLTAGTPHAKRRALCRIARQRGWI*
Ga0157378_122024452	3300013297	Miscanthus Rhizosphere	SPFQRQVVEALCSGWLAGGSLDDLPTNEEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0163162_106646162	3300013306	Switchgrass Rhizosphere	RHGDRIGLGAESVVFSAPGSLADPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0163162_129613992	3300013306	Switchgrass Rhizosphere	GPPAMTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0157376_105199411	3300014969	Miscanthus Rhizosphere	PGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0134072_104372521	3300015357	Grasslands Soil	QILLRPLSPFQQQVVRALCERWLAGGSLEDLPSNEEIAARLGTPGATETVKAALRRAYAKAGLTSGSPYAKRRALCKIARQRGWV*
Ga0184612_103490232	3300018078	Groundwater Sediment	VFSAPESLIDPEVTTALQTGPPAMTRPLSPFQRQVVEALCSSWLAGGSLDELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI
Ga0193748_10264132	3300019865	Soil	ATRVLSPFQQQVVGCLCQPWLDGASLDRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTEGPPHAKRRALCRVSRQRGWI
Ga0206350_100151371	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EPVDIGGGPAGALSPLQTQVVRILCECWLTTGNLDRLPTNEEIAAELGTPGAAATVKAALRRAYAKAGISDLPPQAKRRALCRIARNHRWI
Ga0196964_105270251	3300020202	Soil	VLGSAVLVFSCPLEDADIDRTESLEPEPAYVRSLSPLQQQVVHCLCQRWLHGGSLEELPSNEEIAAMLGTPGATETVKAALRRTYAKAGLSEGAPHAKRRALCRIARERGWI
Ga0247661_10096451	3300024254	Soil	PPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0247660_10572612	3300024317	Soil	GLGAESVVFSAPESMIDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCRVARQRGWI
Ga0247668_10522702	3300024331	Soil	APESMIDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207663_106332031	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IQAGAKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207660_110311232	3300025917	Corn Rhizosphere	PLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGW
Ga0207660_114008331	3300025917	Corn Rhizosphere	VPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTE
Ga0207650_115019031	3300025925	Switchgrass Rhizosphere	RIQAGSKVPLRHGDRIGLGAESVVFSAPGSLVDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATEIVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207690_114818702	3300025932	Corn Rhizosphere	ESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207670_106348442	3300025936	Switchgrass Rhizosphere	PALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207669_117556681	3300025937	Miscanthus Rhizosphere	QVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207711_117402691	3300025941	Switchgrass Rhizosphere	RQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207667_120881501	3300025949	Corn Rhizosphere	VFSAPESMIDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207678_101487594	3300026067	Corn Rhizosphere	FLNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207678_114892541	3300026067	Corn Rhizosphere	RHGDRIGLGAESVVFSAPGSLVDPEVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207698_124762071	3300026142	Corn Rhizosphere	PFQRQVVEALCSGWLAGGSLDDPPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0209267_12271972	3300026331	Soil	QELPVGRPLSPLQLQVVRLLAAPWLDGGTLDQLPSNEEIAAKLGTPGAAGTVKAALRRAYAKAGVSDLPAHAKRRALCRIARERGWI
Ga0268266_109731441	3300028379	Switchgrass Rhizosphere	LNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQAGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0268264_115085591	3300028381	Switchgrass Rhizosphere	TRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307315_100338635	3300028721	Soil	ALSPFQQQVVGCLCQPWLDGASLDRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTEGPPHAKRRALCRVSRQRGWI
Ga0307319_101352062	3300028722	Soil	MESLPAATTRVLSPFQQQVVRALCRPWLEGASLDRLPTNEEIAAELGTPGAENTVKAALRRAYAKAGLTEGPPHAKRRALCRVARQRAWI
Ga0307316_101486292	3300028755	Soil	IDPEVTTALQVGRPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307282_101058686	3300028784	Soil	MENLPPVPTRALSPFQQQVVGCLCRPWLDGASLDRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTEGPPHAKRRALCRVSRQRGWI
Ga0307323_101102281	3300028787	Soil	LRHGDRIGLGAESVVFSAPGSLIDPEVTTALQVGRPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307290_103673632	3300028791	Soil	LQTGPPAMTRPLSPFQRQVVEALCSGWLAGGSLEELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYSKRRALCKIARQRGWI
Ga0307299_102696422	3300028793	Soil	VTTALQVGRPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307305_102790562	3300028807	Soil	PAMTRPLSPFQRQVVEALCSGWLAGGSLEELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYSKRRALCKIARQRGWI
Ga0307310_104033022	3300028824	Soil	FSWLRKSTDPNETDPMESLPAATTRVLSPFQQQVVRALCRPWLEGASLDRLPTNEEIAAELGTPGAENTVKAALRRAYAKAGLTEGPPHAKRRALCRVARQRAWI
Ga0307310_106984821	3300028824	Soil	MENLPPSAAPRLSPFQQQVVAALCRPWLGGASLDRLPTNEEIAAELGTPGAAGTVKAALRRAYAKAGLTEGPPHAKRRALCRMARQRGWI
Ga0307312_107103312	3300028828	Soil	EVTTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLRTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI
Ga0307278_103850342	3300028878	Soil	FLNGSRIQAGSKVPLRHGDRIGLGAESVVFSAPGSLIDPEVTTALQTGPPALTRPLSPFQRQVVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI
Ga0307304_104234561	3300028885	Soil	TDAMENPPPVPTRALSPFQQQVVGCLCQPWLDGASLDRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTEGPPHAKRRALCRVSRQRGWI
Ga0310892_112339681	3300031858	Soil	TTALQTGPPALTRPLSPFQRQVVEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307406_115562771	3300031901	Rhizosphere	IDPEVTTALQTGPPAMTRPLSPFQRQVVEALCSGWLAGGSLDELPTNDEIASRLGTPGATETVKAALRRAYAKAGLTDGSPYAKRRALCKIARQRGWV
Ga0315271_116214682	3300032256	Sediment	VDPEVTTALQTGPPAMTRPLSPFQRQVVEALCSAWLAGGSLDELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092493

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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