Metagenome / Metatranscriptome Family F092456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092456
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	79 residues
Representative Sequence	LGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Number of Associated Samples	94
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.290 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.579 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.991 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 16.00% Coil/Unstructured: 44.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00106	adh_short	70.09
PF13561	adh_short_C2	23.36
PF02826	2-Hacid_dh_C	1.87
PF00324	AA_permease	0.93
PF06314	ADC	0.93
PF00126	HTH_1	0.93
PF13520	AA_permease_2	0.93
PF00753	Lactamase_B	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.93
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.93
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.93
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.93
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.29 %
Unclassified	root	N/A	32.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.32 %
Unclassified	root	N/A	32.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	21.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	21.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.54 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	21.50 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	1.87 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.71 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	21.50 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	1.87 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01BTKGU	Not Available	507	Open in IMG/M
3300004633\|Ga0066395_10782407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300005172\|Ga0066683_10233040	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005332\|Ga0066388_102279252	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005434\|Ga0070709_10607735	Not Available	842	Open in IMG/M
3300005440\|Ga0070705_101229945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300005518\|Ga0070699_101985713	Not Available	532	Open in IMG/M
3300005764\|Ga0066903_104804325	Not Available	718	Open in IMG/M
3300006046\|Ga0066652_101941325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300006175\|Ga0070712_101784913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300006176\|Ga0070765_101504397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	634	Open in IMG/M
3300006804\|Ga0079221_10811632	Not Available	672	Open in IMG/M
3300007076\|Ga0075435_100211774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1644	Open in IMG/M
3300007076\|Ga0075435_102009918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300009545\|Ga0105237_11385466	Not Available	709	Open in IMG/M
3300009792\|Ga0126374_10222551	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010048\|Ga0126373_10041107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4068	Open in IMG/M
3300010048\|Ga0126373_11705314	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300010154\|Ga0127503_10457625	Not Available	515	Open in IMG/M
3300010359\|Ga0126376_12284765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	587	Open in IMG/M
3300010366\|Ga0126379_10630078	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300010371\|Ga0134125_12808336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	529	Open in IMG/M
3300010376\|Ga0126381_101409733	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010376\|Ga0126381_104781696	Not Available	521	Open in IMG/M
3300010398\|Ga0126383_13411583	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_13607571	Not Available	505	Open in IMG/M
3300011119\|Ga0105246_12144874	Not Available	542	Open in IMG/M
3300012363\|Ga0137390_10384029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1384	Open in IMG/M
3300012929\|Ga0137404_11531410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	617	Open in IMG/M
3300012971\|Ga0126369_10303829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1598	Open in IMG/M
3300012971\|Ga0126369_12626067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	588	Open in IMG/M
3300012988\|Ga0164306_10581018	Not Available	875	Open in IMG/M
3300013308\|Ga0157375_11712725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	744	Open in IMG/M
3300014968\|Ga0157379_12330827	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300016294\|Ga0182041_10864386	Not Available	811	Open in IMG/M
3300016319\|Ga0182033_11832052	Not Available	551	Open in IMG/M
3300016422\|Ga0182039_11070902	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300017966\|Ga0187776_11277802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	554	Open in IMG/M
3300017966\|Ga0187776_11277804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	554	Open in IMG/M
3300018058\|Ga0187766_10201001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300018058\|Ga0187766_11452844	Not Available	505	Open in IMG/M
3300018064\|Ga0187773_10291609	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300018482\|Ga0066669_11469639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	619	Open in IMG/M
3300019887\|Ga0193729_1112065	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300019890\|Ga0193728_1184603	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300020582\|Ga0210395_10725988	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300021181\|Ga0210388_10730074	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021401\|Ga0210393_11247861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	597	Open in IMG/M
3300021403\|Ga0210397_10581111	Not Available	855	Open in IMG/M
3300021407\|Ga0210383_11593177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	538	Open in IMG/M
3300021439\|Ga0213879_10153689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	669	Open in IMG/M
3300025928\|Ga0207700_10809111	Not Available	838	Open in IMG/M
3300026078\|Ga0207702_10911104	Not Available	871	Open in IMG/M
3300031128\|Ga0170823_11185905	Not Available	528	Open in IMG/M
3300031544\|Ga0318534_10272127	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031545\|Ga0318541_10503937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	677	Open in IMG/M
3300031561\|Ga0318528_10586148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	598	Open in IMG/M
3300031573\|Ga0310915_10481361	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031679\|Ga0318561_10087471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1622	Open in IMG/M
3300031679\|Ga0318561_10697462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	558	Open in IMG/M
3300031680\|Ga0318574_10811901	Not Available	548	Open in IMG/M
3300031713\|Ga0318496_10632361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	591	Open in IMG/M
3300031719\|Ga0306917_10381151	Not Available	1099	Open in IMG/M
3300031719\|Ga0306917_11325726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	556	Open in IMG/M
3300031720\|Ga0307469_11470877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	652	Open in IMG/M
3300031724\|Ga0318500_10621476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	548	Open in IMG/M
3300031736\|Ga0318501_10790291	Not Available	525	Open in IMG/M
3300031744\|Ga0306918_10544956	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300031751\|Ga0318494_10254290	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031765\|Ga0318554_10505474	Not Available	684	Open in IMG/M
3300031771\|Ga0318546_11256398	Not Available	520	Open in IMG/M
3300031798\|Ga0318523_10148589	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300031833\|Ga0310917_10828013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	624	Open in IMG/M
3300031845\|Ga0318511_10307908	Not Available	717	Open in IMG/M
3300031846\|Ga0318512_10089664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1433	Open in IMG/M
3300031846\|Ga0318512_10189407	Not Available	1003	Open in IMG/M
3300031879\|Ga0306919_11000303	Not Available	639	Open in IMG/M
3300031890\|Ga0306925_10952710	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300031897\|Ga0318520_10756895	Not Available	608	Open in IMG/M
3300031908\|Ga0310900_11881035	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031910\|Ga0306923_10887069	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300031912\|Ga0306921_11817845	Not Available	655	Open in IMG/M
3300031942\|Ga0310916_10923874	Not Available	731	Open in IMG/M
3300031946\|Ga0310910_11509612	Not Available	515	Open in IMG/M
3300031954\|Ga0306926_10228071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2311	Open in IMG/M
3300031959\|Ga0318530_10334033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	627	Open in IMG/M
3300031981\|Ga0318531_10097286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300032001\|Ga0306922_10219317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2042	Open in IMG/M
3300032010\|Ga0318569_10253955	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300032043\|Ga0318556_10143283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300032051\|Ga0318532_10315588	Not Available	555	Open in IMG/M
3300032052\|Ga0318506_10288384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	728	Open in IMG/M
3300032065\|Ga0318513_10177907	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300032076\|Ga0306924_11942051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	609	Open in IMG/M
3300032090\|Ga0318518_10253224	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300032091\|Ga0318577_10057222	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300032094\|Ga0318540_10259599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300032094\|Ga0318540_10369170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	693	Open in IMG/M
3300032180\|Ga0307471_100861797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1073	Open in IMG/M
3300032180\|Ga0307471_101483472	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032180\|Ga0307471_102157829	Not Available	701	Open in IMG/M
3300032205\|Ga0307472_102721184	Not Available	505	Open in IMG/M
3300032770\|Ga0335085_10132060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3166	Open in IMG/M
3300032954\|Ga0335083_10083553	All Organisms → cellular organisms → Bacteria	3208	Open in IMG/M
3300032955\|Ga0335076_11065739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	691	Open in IMG/M
3300033158\|Ga0335077_10687596	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300033808\|Ga0314867_179280	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.52%
Plants	Host-Associated → Plants	6.54%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.35%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_03591760	2170459005	Grass Soil	VINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD
Ga0066395_107824072	3300004633	Tropical Forest Soil	YKNFFQTFVLHPTSFVTQTSITVVCLAALVLAVVFTILGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0066683_102330402	3300005172	Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD*
Ga0066388_1022792521	3300005332	Tropical Forest Soil	LGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD*
Ga0070709_106077351	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0070705_1012299451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VANIFYHLRFHRAEFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0070699_1019857131	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FVLNATSFTAQTSITVACFSALALAVVFTVLGIRRTGRLTRPHGFVEDEPEVIQAARE*
Ga0066903_1048043252	3300005764	Tropical Forest Soil	NFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD*
Ga0066652_1019413252	3300006046	Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVIGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0070712_1017849132	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0070765_1015043971	3300006176	Soil	LPVLGIAINVYIFYKNFFQTFVLNATSFTTQTSITVACFAALVLAVVLTVLGIRRTGRLTRPHGFVEDEPAVVEAAGD*
Ga0079221_108116322	3300006804	Agricultural Soil	LGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0075435_1002117741	3300007076	Populus Rhizosphere	QTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0075435_1020099181	3300007076	Populus Rhizosphere	VANIFYHLRYHRADFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAKAAGD*
Ga0105237_113854662	3300009545	Corn Rhizosphere	HRADFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0126374_102225511	3300009792	Tropical Forest Soil	NIFYHLRYHRADFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD*
Ga0126373_100411077	3300010048	Tropical Forest Soil	NIFYHLRYHRTDFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVVCLAALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATTE*
Ga0126373_117053142	3300010048	Tropical Forest Soil	FVLNATSFTTQTSITVACFSAVALAVVFTVIGIRRTGRLTRPHGFVEDEPEVIQAAPD*
Ga0127503_104576251	3300010154	Soil	PLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0126376_122847651	3300010359	Tropical Forest Soil	QTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD
Ga0126379_106300781	3300010366	Tropical Forest Soil	NVYIFYKNFFQTFVLHPTSFVTQTSITVACLAALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATTE*
Ga0134125_128083361	3300010371	Terrestrial Soil	NVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0126381_1014097332	3300010376	Tropical Forest Soil	LRYHRADLNWVTNMVVPLLGIAINVYIFYKNFFQTFVLNATSFTTQTSITVACFSAVALAVVFTVIGIRRTGRLTRPHGFVEDEPEVIRAAPD*
Ga0126381_1047816961	3300010376	Tropical Forest Soil	LPVAGIVINCYIFYKNFFQTFVLNATSFVLQTSISVACGLALLLAVVFTVIGIRRTGRLGRPHSFVESDLAAEKAVPG*
Ga0126383_134115831	3300010398	Tropical Forest Soil	IFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0126383_136075711	3300010398	Tropical Forest Soil	GIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACLAALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATTE*
Ga0105246_121448742	3300011119	Miscanthus Rhizosphere	LKSVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0137390_103840293	3300012363	Vadose Zone Soil	FQTFVLNATSFQLQTSISVACGLAVLLAVVFTVLGIRRTGRLGRPHSFVESDPAVDRAVSG*
Ga0137404_115314102	3300012929	Vadose Zone Soil	YHLRFHRADFNWVTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0126369_103038291	3300012971	Tropical Forest Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACLAALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATTE*
Ga0126369_126260671	3300012971	Tropical Forest Soil	NWVTNLLLPVLGIAINVCIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD*
Ga0164306_105810181	3300012988	Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD*
Ga0157375_117127251	3300013308	Miscanthus Rhizosphere	DFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD*
Ga0157379_123308272	3300014968	Switchgrass Rhizosphere	VTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD*
Ga0182041_108643862	3300016294	Soil	FVLHPTSFVTQTSITVACVAALVLAVVFTVVGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0182033_118320521	3300016319	Soil	LRYHRADFNWVTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0182039_110709022	3300016422	Soil	LLPLLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0187776_112778021	3300017966	Tropical Peatland	NVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD
Ga0187776_112778041	3300017966	Tropical Peatland	NVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVVEAAGD
Ga0187766_102010013	3300018058	Tropical Peatland	FQTFVLHPTSFVTQTSITVACVAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLKAAG
Ga0187766_114528442	3300018058	Tropical Peatland	TNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEATKE
Ga0187773_102916092	3300018064	Tropical Peatland	INVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD
Ga0066669_114696391	3300018482	Grasslands Soil	KNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD
Ga0193729_11120652	3300019887	Soil	TNLLLPVIGIAINCYIFYKNFFQTFVLNATSFQLQTSISVACGLAVLLAVVFTVLGIRRTGRLGRPHSFVEDDPAVDEAISG
Ga0193728_11846032	3300019890	Soil	LLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD
Ga0210395_107259882	3300020582	Soil	NLILPVLGIAINVYIFYKNFFQTFVLNATSFQLQTSISVACGLAVLLAVVFTVLGIRRTGRLGQPQGFTETEHEPDEAVPS
Ga0210388_107300741	3300021181	Soil	NCYIFYKNFFQTFVLNATSFQLQTSISVACGLAVLLAVVFTVLGIRRTGRLGQPQGFTETEHEPDEAVPS
Ga0210393_112478612	3300021401	Soil	INIYIFYKNFFQTFVLNATSFTTQTSITVACVACVVLAVVFTVIGIRRTGRLGRPKGFIEDEPEVIEAAGD
Ga0210397_105811111	3300021403	Soil	NWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVVCFAALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0210383_115931771	3300021407	Soil	YKNFFQTFVLNATSFQLQTSISVACGLAVLLAVVFTVLGIRRTGRLGQPQGFTETEHQPDEAVPS
Ga0213879_101536891	3300021439	Bulk Soil	IFYHRRFHRGEFNLLTNLVIPLLGIVINVYIFYKNFFQTFVLNATSFQLQTSISVACGVAVVLAVVFTVIGIRRTGRLDRPQSFVESDQPADPAVSG
Ga0207700_108091112	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LRFHRAEFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0207702_109111042	3300026078	Corn Rhizosphere	HRAEFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0170823_111859051	3300031128	Forest Soil	FYHRRYHRGDFNLLTNLVLPVIGIAINVYIFYKNFFQTFVLHATSFVLQTSISVACLAAALLAVVFTVIGIRRTGRLGRPQGFIEDEPAVIEAAGG
Ga0318534_102721272	3300031544	Soil	HLRYHRADFNWVTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVVGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0318541_105039371	3300031545	Soil	YHLRYHRRDFNWLTNLLLPLLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318528_105861482	3300031561	Soil	IFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVVGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0310915_104813612	3300031573	Soil	TCVANIFYHLRYHRHDFNWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318561_100874711	3300031679	Soil	FYHRRYHRRDFNPMTNLVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGIRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318561_106974621	3300031679	Soil	VLPVLGIAINIYIFYKNFFQTFVLHPTSFVTETSITVACAACVVLAVVFTVIGIRRTGRLSRPHGFIEDEPEVAQAAGD
Ga0318574_108119012	3300031680	Soil	CVANIFYHLRYHRHDFNWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEATKE
Ga0318496_106323612	3300031713	Soil	LRYHRADFNWVTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVVGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0306917_103811512	3300031719	Soil	LLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0306917_113257261	3300031719	Soil	PVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0307469_114708772	3300031720	Hardwood Forest Soil	DFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0318500_106214762	3300031724	Soil	NLVLPVLGIAINIYIFYKNFFQTFVLHPTSFVTETSITVACAACVVLAVVFTVIGIRRTGRLSRPHGFIEDEPEVAQAAGD
Ga0318501_107902911	3300031736	Soil	FQTFVLHPTSFVTQTSITVACVSALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATK
Ga0306918_105449562	3300031744	Soil	YIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318494_102542901	3300031751	Soil	INIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318554_105054742	3300031765	Soil	IFYKNFFQTFVLNATIFTLQTSITVACVACVLLAVVFTVIGIRRTGRLSRPHGFIEDEPEVIQAAGD
Ga0318546_112563982	3300031771	Soil	HRHDFNPMTNLVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVACVLLAVVFTVIGIRRTGRLSRPHGFIEDEPEVIQAAGD
Ga0318523_101485891	3300031798	Soil	YIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0310917_108280131	3300031833	Soil	NVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318511_103079082	3300031845	Soil	RYHRPDFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVSALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATKE
Ga0318512_100896641	3300031846	Soil	LPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318512_101894071	3300031846	Soil	LGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0306919_110003032	3300031879	Soil	VYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0306925_109527102	3300031890	Soil	PVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318520_107568951	3300031897	Soil	FLQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0310900_118810351	3300031908	Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRHTGRLTRPHGFIEDEPAVAEAAGD
Ga0306923_108870692	3300031910	Soil	TNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACFAALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0306921_118178451	3300031912	Soil	VYIFYKNFFQTFVLHPTSFVTQTSITVACVSALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATKE
Ga0310916_109238741	3300031942	Soil	WLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0310910_115096122	3300031946	Soil	ANIFYHLRYHRADFNWVTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALVLAVVFTVVGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0306926_102280711	3300031954	Soil	NPMTNLVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGIRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318530_103340332	3300031959	Soil	RYHRHDFNWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318531_100972861	3300031981	Soil	LLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVIFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0306922_102193173	3300032001	Soil	LVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVACVVLAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318569_102539551	3300032010	Soil	VYIFYKNFFQTFVLHPTSFVTQTSITVACTTALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0318556_101432831	3300032043	Soil	LLGIVFNVYIFYKNFFQTFVLHPTSFVTQTSITVACAAALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318532_103155881	3300032051	Soil	LRYHRHDFNWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0318506_102883841	3300032052	Soil	TCVANIFYHRRYHRRDFNPMTNLVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0318513_101779072	3300032065	Soil	NWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVSALVLAVVFTILGIRRTGRLTRPHGFVEDEPAVLEATKE
Ga0306924_119420512	3300032076	Soil	FFQTFVLNATSFTLQTSITVACVVCVLLAVVFTVIGIRRTGRLSRPHGFIEDEPEVIQAAGD
Ga0318518_102532241	3300032090	Soil	HDFNWLTNLLLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0318577_100572222	3300032091	Soil	VTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLQAAEE
Ga0318540_102595992	3300032094	Soil	VINVYIFYKNFFQTFVLHPTSFVTQTSITVACAVALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAEE
Ga0318540_103691702	3300032094	Soil	YHRRDFNPMTNLVLPVLGIAINIYIFYKNFFQTFVLNATSFTLQTSITVACVAAVALAVVFTVIGVRRTGRLSRPHGFIEDEPEVIEAAGD
Ga0307471_1008617971	3300032180	Hardwood Forest Soil	QTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0307471_1014834721	3300032180	Hardwood Forest Soil	FYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0307471_1021578292	3300032180	Hardwood Forest Soil	NLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACATALVLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0307472_1027211841	3300032205	Hardwood Forest Soil	LLPLLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVVCFAALVLAVVFTVLGIRRTGRLTRPHGFVEDEPAVLEAAGE
Ga0335085_101320601	3300032770	Soil	INVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0335083_100835533	3300032954	Soil	TNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEATGD
Ga0335076_110657392	3300032955	Soil	CVANIFYHLRYHRADFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVVEAAGD
Ga0335077_106875961	3300033158	Soil	YHLRYHRADFNWVTNLLLPVLGIAINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVAEAAGD
Ga0314867_179280_231_500	3300033808	Peatland	RADFNWVTNLLLPVLGIVINVYIFYKNFFQTFVLHPTSFVTQTSITVACVAALLLAVVFTVLGIRRTGRLTRPHGFIEDEPAVVEAAGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences