Metagenome Family F092379

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092379
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	85 residues
Representative Sequence	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Number of Associated Samples	80
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.34 %
% of genes near scaffold ends (potentially truncated)	32.71 %
% of genes from short scaffolds (< 2000 bps)	79.44 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.467 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere (14.953 % of family members)
Environment Ontology (ENVO)	Unclassified (34.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.486 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 26.13% Coil/Unstructured: 57.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02129	Peptidase_S15	3.74
PF11139	SfLAP	3.74
PF01139	RtcB	2.80
PF04191	PEMT	1.87
PF08327	AHSA1	1.87
PF13783	DUF4177	0.93
PF06094	GGACT	0.93
PF12802	MarR_2	0.93
PF13474	SnoaL_3	0.93
PF12680	SnoaL_2	0.93
PF01326	PPDK_N	0.93
PF13180	PDZ_2	0.93
PF13396	PLDc_N	0.93
PF13466	STAS_2	0.93
PF01323	DSBA	0.93
PF00005	ABC_tran	0.93
PF01467	CTP_transf_like	0.93
PF13414	TPR_11	0.93
PF13560	HTH_31	0.93
PF14329	DUF4386	0.93
PF03704	BTAD	0.93
PF05343	Peptidase_M42	0.93
PF02416	TatA_B_E	0.93
PF01266	DAO	0.93
PF01544	CorA	0.93
PF01545	Cation_efflux	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	2.80
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.93
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.93
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.93
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.93
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	0.93
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	0.93
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	0.93
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.93
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.93
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
All Organisms	root	All Organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
cellular organisms	root	All Organisms → cellular organisms	48.60 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.84 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.93 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.28 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.93 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.93 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Halorubraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	0.93 %
Halorubrum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.93 %
Halorubrum ezzemoulense	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum ezzemoulense	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_FV90NF402G5JG3	Not Available	523	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig103568	Not Available	502	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0775159	Not Available	1008	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11326151	Not Available	1060	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104968097	Not Available	582	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105751727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1798	Open in IMG/M
3300000956\|JGI10216J12902_104451352	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300000956\|JGI10216J12902_105317943	Not Available	1191	Open in IMG/M
3300000956\|JGI10216J12902_110057633	Not Available	1051	Open in IMG/M
3300000956\|JGI10216J12902_110501630	Not Available	842	Open in IMG/M
3300004463\|Ga0063356_100524097	Not Available	1575	Open in IMG/M
3300004463\|Ga0063356_102314681	Not Available	820	Open in IMG/M
3300004479\|Ga0062595_101055322	Not Available	705	Open in IMG/M
3300005330\|Ga0070690_100707367	Not Available	774	Open in IMG/M
3300005338\|Ga0068868_100033292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3971	Open in IMG/M
3300005341\|Ga0070691_10673835	Not Available	618	Open in IMG/M
3300005345\|Ga0070692_10277335	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300005354\|Ga0070675_100665798	Not Available	947	Open in IMG/M
3300005365\|Ga0070688_100016958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4173	Open in IMG/M
3300005456\|Ga0070678_100218551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1583	Open in IMG/M
3300005545\|Ga0070695_101215315	Not Available	620	Open in IMG/M
3300005546\|Ga0070696_101795127	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005563\|Ga0068855_100801914	Not Available	1001	Open in IMG/M
3300005614\|Ga0068856_102623177	Not Available	510	Open in IMG/M
3300005764\|Ga0066903_100203119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2969	Open in IMG/M
3300005764\|Ga0066903_100774637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1710	Open in IMG/M
3300005764\|Ga0066903_107368149	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum ezzemoulense	568	Open in IMG/M
3300005840\|Ga0068870_10743343	Not Available	680	Open in IMG/M
3300005937\|Ga0081455_10005621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13698	Open in IMG/M
3300006038\|Ga0075365_10260706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1219	Open in IMG/M
3300006049\|Ga0075417_10203702	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006058\|Ga0075432_10121884	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300006177\|Ga0075362_10001308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7895	Open in IMG/M
3300006237\|Ga0097621_101636007	Not Available	612	Open in IMG/M
3300006358\|Ga0068871_100359161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1290	Open in IMG/M
3300006844\|Ga0075428_100056886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4282	Open in IMG/M
3300006845\|Ga0075421_100165535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2758	Open in IMG/M
3300006845\|Ga0075421_101881385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300006881\|Ga0068865_100121859	Not Available	1940	Open in IMG/M
3300009094\|Ga0111539_11144497	Not Available	904	Open in IMG/M
3300009094\|Ga0111539_11498539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300009148\|Ga0105243_12589246	Not Available	547	Open in IMG/M
3300009156\|Ga0111538_10779954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300009176\|Ga0105242_10052756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3319	Open in IMG/M
3300009176\|Ga0105242_10094667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2520	Open in IMG/M
3300010039\|Ga0126309_10010948	All Organisms → cellular organisms → Bacteria	3727	Open in IMG/M
3300010041\|Ga0126312_10025634	All Organisms → cellular organisms → Bacteria	3937	Open in IMG/M
3300010362\|Ga0126377_13375556	Not Available	516	Open in IMG/M
3300010373\|Ga0134128_12576701	Not Available	560	Open in IMG/M
3300010403\|Ga0134123_10738606	Not Available	968	Open in IMG/M
3300010403\|Ga0134123_10771221	Not Available	951	Open in IMG/M
3300012897\|Ga0157285_10053928	Not Available	989	Open in IMG/M
3300012939\|Ga0162650_100033537	Not Available	795	Open in IMG/M
3300012948\|Ga0126375_11741254	Not Available	542	Open in IMG/M
3300012951\|Ga0164300_10032415	Not Available	1932	Open in IMG/M
3300012951\|Ga0164300_10047315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300012955\|Ga0164298_10068663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1773	Open in IMG/M
3300012958\|Ga0164299_10004047	All Organisms → cellular organisms → Bacteria	4772	Open in IMG/M
3300012987\|Ga0164307_10238568	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300013307\|Ga0157372_12646894	Not Available	576	Open in IMG/M
3300013308\|Ga0157375_11394516	Not Available	825	Open in IMG/M
3300014325\|Ga0163163_10256415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300014326\|Ga0157380_10876260	Not Available	922	Open in IMG/M
3300014326\|Ga0157380_12289947	Not Available	605	Open in IMG/M
3300014745\|Ga0157377_10164294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1383	Open in IMG/M
3300015371\|Ga0132258_10817260	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300015371\|Ga0132258_10855467	Not Available	2295	Open in IMG/M
3300015371\|Ga0132258_10871727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2272	Open in IMG/M
3300015371\|Ga0132258_11079554	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2029	Open in IMG/M
3300015371\|Ga0132258_11150476	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300015371\|Ga0132258_11447009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1736	Open in IMG/M
3300015371\|Ga0132258_12469541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300015371\|Ga0132258_13228069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300015371\|Ga0132258_13237396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300015372\|Ga0132256_103554996	Not Available	524	Open in IMG/M
3300015373\|Ga0132257_100017674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7428	Open in IMG/M
3300015373\|Ga0132257_101677129	Not Available	814	Open in IMG/M
3300015373\|Ga0132257_103047129	Not Available	610	Open in IMG/M
3300015373\|Ga0132257_103104668	Not Available	605	Open in IMG/M
3300015374\|Ga0132255_100353037	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300015374\|Ga0132255_101890067	Not Available	908	Open in IMG/M
3300015374\|Ga0132255_103105387	Not Available	708	Open in IMG/M
3300017965\|Ga0190266_10449437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300018031\|Ga0184634_10021308	Not Available	2464	Open in IMG/M
3300018074\|Ga0184640_10499111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300018081\|Ga0184625_10008321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4725	Open in IMG/M
3300018081\|Ga0184625_10171253	Not Available	1136	Open in IMG/M
3300019356\|Ga0173481_10092893	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300022756\|Ga0222622_10196076	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300025321\|Ga0207656_10442467	Not Available	656	Open in IMG/M
3300025901\|Ga0207688_10108510	Not Available	1609	Open in IMG/M
3300025903\|Ga0207680_10683534	Not Available	735	Open in IMG/M
3300025904\|Ga0207647_10349889	Not Available	837	Open in IMG/M
3300025919\|Ga0207657_11020711	Not Available	634	Open in IMG/M
3300025921\|Ga0207652_10721471	Not Available	888	Open in IMG/M
3300025931\|Ga0207644_11053324	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300026121\|Ga0207683_10169106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1979	Open in IMG/M
3300026142\|Ga0207698_10084578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2572	Open in IMG/M
3300027873\|Ga0209814_10000648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11724	Open in IMG/M
3300027907\|Ga0207428_10393158	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300027909\|Ga0209382_10505090	Not Available	1331	Open in IMG/M
3300028380\|Ga0268265_11457178	Not Available	688	Open in IMG/M
3300028381\|Ga0268264_12452435	Not Available	527	Open in IMG/M
3300031740\|Ga0307468_101023536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300031854\|Ga0310904_10169718	Not Available	1287	Open in IMG/M
3300031901\|Ga0307406_11154240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300034820\|Ga0373959_0138086	Not Available	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.81%
Environmental	Environmental	40.19%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.88%
Terrestrial	Environmental → Terrestrial	35.51%
Aquatic	Environmental → Aquatic	4.67%
Arthropoda	Host-Associated → Arthropoda	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	29.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.30%
Sediment	Environmental → Aquatic → Sediment	4.67%
Roots	Host-Associated → Plants → Roots	4.67%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	14.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.87%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	14.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	14.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_7460990	2040502000	Fungus Garden	MQVVYFKSEDDGDGTYDGQIGRAYLHLDDGSTGEEGRDLGFITLAAAAQIAATHDAELDVDGPTREEWDEPPRLSFVDRLLGR
KansclcFeb2_08844170	2124908045	Soil	VRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITLAAAAGIASEHDAELDVDGPTREEWDEITEPPRRSLLRRLLG
ICChiseqgaiiDRAFT_07751592	3300000033	Soil	MRVLYFKSEDDGDGTYDGQIGHAYLHLDDDAXEXEEHDLGFITLAQAAEIAAEHDAKLEVDGPTREQWDEPPRRSFLDRLRGR*
ICChiseqgaiiFebDRAFT_113261512	3300000363	Soil	MFALSDKRVGDHDASLYFKSEDDGDGTYDGQIGHAYVHLDDGSTGDEGRDLGFITLSAAARIAAKHNAELAYGPTREEWDEPPRPSFFDRLLGR*
INPhiseqgaiiFebDRAFT_1049680971	3300000364	Soil	MGVVYFKAEDDGDGTYDGQIGHAYLHLDDGSTDDEGRDLGFLTLAEAAKLAHEHDAELDIDGPTREQWDRAPRRSLLDRLLRR*
INPhiseqgaiiFebDRAFT_1057517273	3300000364	Soil	MAVLTRSEEGTGRREMQIVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGXEGRELGFITLAEAARIASEHAAGLDVDGPTRDEWDAAPVRRSFLGRLLGR*
JGI10216J12902_1044513522	3300000956	Soil	MRVVYFKSEDDGDGSYDGQIGHAYLHLDDGSTGDEGRDLGFITLAAATKIAGEHDAELDVDGPTREEWDATTEAPRRSLLDRLLGR*
JGI10216J12902_1053179432	3300000956	Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTPAQWDDSPRRSFFARLVGR*
JGI10216J12902_1100576332	3300000956	Soil	MRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITLAAAARVAAEHGVELDVDGARREEWDEEPTSRSLLSRLLGR*
JGI10216J12902_1105016303	3300000956	Soil	SEDDGDGTYDGQIGHAYLELDDGSTGDEGRDLGFITLAEATKIAVEHDAELDLDGPTREQWDEPPRRSFLERLFGR*
Ga0063356_1005240972	3300004463	Arabidopsis Thaliana Rhizosphere	MRVVYFESEDEGDGTYDSQIGHAYLLLDDGSTGDEGRELGFITLTEAATIAAEHDAELDVDGPTREEWDRRSPHRSFLSRLLGS*
Ga0063356_1023146813	3300004463	Arabidopsis Thaliana Rhizosphere	VRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITLAAAAGIAREHDAELDVDGPTREEWDEITEPPRRSFLSRLLGR*
Ga0062595_1010553221	3300004479	Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0070690_1007073672	3300005330	Switchgrass Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLTAAVEIARRHGVEVDVDGPTREEWDL*
Ga0068868_1000332922	3300005338	Miscanthus Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0070691_106738351	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	SAAGAGRGVRTNWVRRATMRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0070692_102773353	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RTNWVRRAKMRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0070675_1006657982	3300005354	Miscanthus Rhizosphere	MRVVYFKSEDEGDGTFDGQIGRAYLDLDDGSTGDEGRDLGFITLAKAARIAVEHDAELDVDGTTPAQWDAPPRRSFLARLVGR*
Ga0070688_1000169581	3300005365	Switchgrass Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLAKAARIAVEHDAELDVDGTTPAQWDAPPRRSFLARLVGR*
Ga0070678_1002185512	3300005456	Miscanthus Rhizosphere	VMSGYDPEMRVIYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHDAELDVDGPTREEWDRPPHRSFLDRLLGR*
Ga0070695_1012153151	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TMRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0070696_1017951271	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VMSGYDPEMRVVYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQDHAAELDVDGPTREEWDRPP
Ga0068855_1008019141	3300005563	Corn Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFAR
Ga0068856_1026231771	3300005614	Corn Rhizosphere	DEGDGTYDGQIGRAYLHLDDGSTADEGRDLAFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0066903_1002031194	3300005764	Tropical Forest Soil	MQVVYFKSEDDGDGTYEGQIGHAYLHLDDGSTGDEGRELGFITVADATRIAGEHAAELDVDGPTRDEWGGAPIRRSFSAGY*
Ga0066903_1007746374	3300005764	Tropical Forest Soil	MQVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDDGRDLGFITLTEASRIASEHAAEVDVDGPTREESDAPPSRRSLLDRLLGR*
Ga0066903_1073681491	3300005764	Tropical Forest Soil	MQIVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRELGFITFTEAARVASEHVAELDVDGPTRDEWDAADAAPVRRSFLGRLLGR*
Ga0068870_107433432	3300005840	Miscanthus Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLAKAARIVVEHDAELDVDGTTPAQWDAPPRRSFLARLVGR*
Ga0081455_100056214	3300005937	Tabebuia Heterophylla Rhizosphere	MGTVYFKSRDEGDGTYDGQIGHAYLHLDDDPPESEGRELGFITLTEAAEIAREHGVDLDVDGPSREDWDKAGQPQRSFLSRLLGR*
Ga0075365_102607063	3300006038	Populus Endosphere	MGWVYFKSEDEGDGTYDGQIGHAYLELDDGSTGDEGLDLGWMSLADAAQVARTHGVELDVDGPTRKEWDKLGTPKRSFVSRLLARLHRVARSRETSS
Ga0075417_102037023	3300006049	Populus Rhizosphere	MGWVYFKSEDEGDGTYDGQIGHAYLELDDGSTGDEGLDLGWMSLADAAQVARTHGVELDVDGPTRKEWDKLGTPKRSFVSRLLGR*
Ga0075432_101218841	3300006058	Populus Rhizosphere	EGSYPSMRVVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAARVAREHSADLDVDGPTRDEWDESSDTEPRSLFKRLLGR*
Ga0075362_100013085	3300006177	Populus Endosphere	MGWVYFKSEDEGDGTYDGQIGHAYLELDDGSTGDEGLDLGWMSLADAAQVARRHGVELDVDGPTRKEWDKLGTPKRSFVSRLLGR*
Ga0097621_1016360072	3300006237	Miscanthus Rhizosphere	TSAAGAGRGARTNWVRRAKMRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0068871_1003591612	3300006358	Miscanthus Rhizosphere	MSGYDHEMRVVYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPTHRSFLDRLLGR*
Ga0075428_1000568868	3300006844	Populus Rhizosphere	MRVVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAARVAREHSADLDVDGPTRDEWDESSDTEPRSLFKRLLGR*
Ga0075421_1001655354	3300006845	Populus Rhizosphere	MGGVYFKSEDDGDGTYDGQIGHAYLHLDDDPPESEGRELGFITLTEAAEIAREHGVGLDVDGPTREDWDKTAEPSRSFLSRLFGR*
Ga0075421_1018813852	3300006845	Populus Rhizosphere	PGGVGFSACLDGNVGRMGWLYFKNEDEGDGTYDGQIGHAYLHLDDDPPEDEGEDLGFITFAKAAEIAREKGVKQDVDGPTREEWHELDAPPRRSFLNRLLGRNDA*
Ga0068865_1001218591	3300006881	Miscanthus Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWGKSPRRSFFARLVGR*
Ga0111539_111444972	3300009094	Populus Rhizosphere	MGGVYFKSEDDGDGTYDGQIGHAYLHLDDDPPESEGREVGFITLTEAAEIAREHGVGLDVDGPTREDWDKTAEPSRSFLSRLFGR*
Ga0111539_114985392	3300009094	Populus Rhizosphere	MRFVYVKSEDDGDGTYDGQIGHPYLHLDDSSTGDEGRDLGFITLVEAAKIAAKHDADLDVDGPTREQWDEPPRSLLDRLLGR*
Ga0105243_125892462	3300009148	Miscanthus Rhizosphere	TNGAGRDVRTNWVRRAKMRVVYFKSEDEGDGTFDGQIGRAYLDLDDGSTGDEGRDLGFITLAKAARIAVEHDAELDVDGTTPAQWDAPPRRSFLARLVGR*
Ga0111538_107799542	3300009156	Populus Rhizosphere	VQIVYFKSEDDGDGTYDGQVGHAYLHLDDGSTGDEGRDLGFVTLAAAARIARDHGAELDVDGPTRAEWDLPPRRSLLDRLFRR*
Ga0105242_100527563	3300009176	Miscanthus Rhizosphere	MSGYDPEMRVIYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQDHAAELDVDGPTREEWDRPPHRSFLDRLLGR*
Ga0105242_100946673	3300009176	Miscanthus Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGLDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0126309_100109486	3300010039	Serpentine Soil	MGLVYFKAEDEGDGTYDGQIGHAYLHLDDDASEDKEQDLGFITLAEAARIARENGVELDVDGPSREEWDRLDDSGARPSVLDRLFRR*
Ga0126312_100256344	3300010041	Serpentine Soil	MAFARRPALFFAAMGLVYFKSKDDGDGTYDGQIGHAYLHLDDDPPESEGRELGFITLAEASEIARQHGAELDVDGPTREDWEKADEPRRSLLSRLLGR*
Ga0126377_133755562	3300010362	Tropical Forest Soil	MRVVYFKSEDDGDGTYDGQVGHAYLHLDDGSTGDEGRDLGFITLAAARTIAGKHNAERDVDGPSRDEWDAPPRRSLLDRLRGR*
Ga0134128_125767011	3300010373	Terrestrial Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRWF
Ga0134123_107386061	3300010403	Terrestrial Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESRRRSFFARLVGR*
Ga0134123_107712211	3300010403	Terrestrial Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLAKAAKIAVEHDAELDVDGPTPAQWD
Ga0157285_100539283	3300012897	Soil	MEPTTARSVTPTCLDDGSTGDEGRELGFITLTEAATIAAEHDAELDVDGPTREEWDRRSPRRSFLSRLLGS*
Ga0162650_1000335371	3300012939	Soil	VVREVRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITFAAAAGIAREHDAELDVDGPTRQEWDEITEPPRRSFLSRLLGQ*
Ga0126375_117412542	3300012948	Tropical Forest Soil	MQVVYFKSEDDGDGTYDGQIGHAYLYLDDGSTGDEGRDLGFITLAEAARIASEHAAELDVDGPTRDEWDAAPIRRSFFGRLLGR*
Ga0164300_100324152	3300012951	Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDIDGPTAAQWDESPRRSFFARLVGR*
Ga0164300_100473152	3300012951	Soil	MSGYDPEMRVVYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPTHRSFLDRLLGR*
Ga0164298_100686632	3300012955	Soil	MSGYDPEMRVVYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPPHRSFLDRLLGR*
Ga0164299_100040474	3300012958	Soil	MSGYDPEMRVVYFKSEDDGDATFDGQICHAYLHLADGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPPHRSFLDRLLGR*
Ga0164307_102385681	3300012987	Soil	MSGYDPEMRVVYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPTHRSFLDRL
Ga0157372_126468942	3300013307	Corn Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDIGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0157375_113945162	3300013308	Miscanthus Rhizosphere	FKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIECDAELDVDGPTAAQWDKSPRRSFFARLVGR*
Ga0163163_102564152	3300014325	Switchgrass Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPR
Ga0157380_108762601	3300014326	Switchgrass Rhizosphere	SEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0157380_122899472	3300014326	Switchgrass Rhizosphere	MRVVYFKSEDEGDGTYDGQVGRAYLDLDDGSTGDEGRDLGFITLAKAARIAVEHDAELDVDGPTPAQWDAPPGRSFLARLVGR*
Ga0157377_101642941	3300014745	Miscanthus Rhizosphere	DGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR*
Ga0132258_108172603	3300015371	Arabidopsis Rhizosphere	MRSVYFKSEDDGDGTYDGQIGHVYLHLDDTSTGDEGRDLGFISLVEATRIAGEYHAELDVDGPTREEWDAPPRRSFLERLLGR*
Ga0132258_108554672	3300015371	Arabidopsis Rhizosphere	MGVIYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFIKLARAAKIAEEHNAELDLDGPTREEWERGPRRSFVDRLLGR*
Ga0132258_108717273	3300015371	Arabidopsis Rhizosphere	MRSVYFKSEDDGDSTYDGQIGHAYLHLDDTSTRDEGRDLGFITLVEATRIAAEYHAELDVDGPTREEWDAPPHRSFLDRLLGR*
Ga0132258_110795542	3300015371	Arabidopsis Rhizosphere	MRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGLITLTAAATLAEQHDAELDVDGPTREEWDRRSPRWSFLGRLLGR*
Ga0132258_111504763	3300015371	Arabidopsis Rhizosphere	MAVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRNLGFIALKEAAEIARTHQAELDVDGPTREEWDAPPRRSFMDRLLGR*
Ga0132258_114470093	3300015371	Arabidopsis Rhizosphere	MRVVYFKSGDDGDGTYDGQIGHAHLHLDDGSTEDEGRDLGFITLAEATKVAEEHDAELDVDGPTREKWDRPPRRSFLDRLLGR*
Ga0132258_124695412	3300015371	Arabidopsis Rhizosphere	MRLVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAAEVAREHSADLDVDGPTRDEWDEISDTEPRSLFKRLLGR*
Ga0132258_132280692	3300015371	Arabidopsis Rhizosphere	MRVVYFKSADDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFIKLARAAKIAAEHDAELDLDGPTREEWDRGPRRSLVDRLLGR*
Ga0132258_132373964	3300015371	Arabidopsis Rhizosphere	EDDGDGTYDGQIGHGYLHLDDGSTGDEGRDLGFITLVAAAKIAAKHDAELDVDGPTREQWDEPPRSFLDRLLGR*
Ga0132256_1035549961	3300015372	Arabidopsis Rhizosphere	MAVVYFKSADDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFIALKEAAEIARTHQAELDVDGPMREEWDAPPRRSFTDRLLGR*
Ga0132257_10001767411	3300015373	Arabidopsis Rhizosphere	MRIVYFKPEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITLVEATGIAGEHDAELDVDGPTREEWDAPPRRSFLDRLLGR*
Ga0132257_1016771292	3300015373	Arabidopsis Rhizosphere	MAVVYFKSADDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFIALKEAAEIARTHQAEVDVDGPTREEWDAPPRRSFMDRLLGR*
Ga0132257_1030471291	3300015373	Arabidopsis Rhizosphere	MRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFIKLARAAKIAEEHNAELDLDGPTREEWERGPRRSFVDRLLGR*
Ga0132257_1031046681	3300015373	Arabidopsis Rhizosphere	MAVVYFKPEDDGDGTDDVVGHAYLHLDDDSGDVGEYDLGFIALKDADDIARTHKADLEVDGPPREELDPPPQRSV
Ga0132255_1003530374	3300015374	Arabidopsis Rhizosphere	MRLVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAAEVAREHSADLDVDGPTRDEWDESSETEPRSLFKRLLGR*
Ga0132255_1018900671	3300015374	Arabidopsis Rhizosphere	MGVIYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGLITLTAAATLAEQHDAELDVDGPTREEWDRRSPRWSFLGRLLGR*
Ga0132255_1031053871	3300015374	Arabidopsis Rhizosphere	MAVVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFIALKEAAEIARTHQAELDVDGPTREEWDAPPRRSFMDRLLGR*
Ga0190266_104494372	3300017965	Soil	MAVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGEEGRGLGFIALKEAAEIARRHEAELDVDGPTREEWDAPPRRSFMDRLLGR
Ga0184634_100213084	3300018031	Groundwater Sediment	VRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITFAAAAGIAREHDAELDVDGPTRQEWDEITEPPRRSFLSRLLGQ
Ga0184640_104991112	3300018074	Groundwater Sediment	YDGQIGHAYLHLDDGSTGDEGRDLGFITFAAAAGIAREHDAELDVDGPTREEWDEITEPPRRSFLSRLLGQ
Ga0184625_100083213	3300018081	Groundwater Sediment	VVREVRVVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITFAAAAGIAREHDAELDVDGPTREEWDEITEPPRRSFLSRLLGQ
Ga0184625_101712531	3300018081	Groundwater Sediment	MAVVYFKSEDDGDGTYNGQIGHAYLHVDDGSTGDEGRDLGFIALKEAAEIARRHEAELDVDGPTREEWDAPPRRSFMDRLLGR
Ga0173481_100928934	3300019356	Soil	LSYGGMKRFVNRAEGSSPSMRVVYFKSEDDGDGSYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAAEVAREHSADLDVDGPTRDEWDEISDTKPRSLFKRLLGR
Ga0222622_101960761	3300022756	Groundwater Sediment	MAIVYFKSEDDGDGTYDGQIGHAYLHLDDGSTGDEGRDLGFITLTAAAEIARRHDAELDVDGPTREEWGAPPRRSLFDRLLGR
Ga0207656_104424672	3300025321	Corn Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0207688_101085101	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0207680_106835341	3300025903	Switchgrass Rhizosphere	RGARTNWVRRAKMRVVYFKSEDEGDGTYHGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0207647_103498893	3300025904	Corn Rhizosphere	KSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0207657_110207111	3300025919	Corn Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLAKAARIAVEHDAELDVDGTTPAQWDAPPRRSFLARLVGR
Ga0207652_107214711	3300025921	Corn Rhizosphere	RRATMRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0207644_110533242	3300025931	Switchgrass Rhizosphere	MRFASLSSRIRGWCRLMSGYDDPEMRVVYFKSDDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHAAELDVDGPTREEWDRPSHRSFLDRLLGR
Ga0207683_101691063	3300026121	Miscanthus Rhizosphere	MSGYDPEMRVIYFKSEDDGDGTFDGQIGHAYLHLDDGSTGDEGRDLGFITLTQAAKLAQEHDAELDVDGPTREEWDRPPHRSFLDRLLGR
Ga0207698_100845785	3300026142	Corn Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRR
Ga0209814_1000064810	3300027873	Populus Rhizosphere	MGWVYFKSEDEGDGTYDGQIGHAYLELDDGSTGDEGLDLGWMSLADAAQVARTHGVELDVDGPTRKEWDKLGTPKRSFVSRLLGR
Ga0207428_103931581	3300027907	Populus Rhizosphere	EGSYPSMRVVYFKSEDDGDGTYDGQIGHAYLQLDDGSTGDEGRDLGFITLAAAARVAREHSADLDVDGPTRDEWDESSDTEPRSLFKRLLGR
Ga0209382_105050901	3300027909	Populus Rhizosphere	MGGVYFKSEDDGDGTYDGQIGHAYLHLDDDPPESEGRELGFITLTEAAEIAREHGVGLDVDGPTREDWDKTAEPSRSFLSRLFGR
Ga0268265_114571782	3300028380	Switchgrass Rhizosphere	VYFKSEDEGDGTYDGQIGRAYLDLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDESPRRSFFARLVGR
Ga0268264_124524351	3300028381	Switchgrass Rhizosphere	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDIDGPTAAQWDESPRRSFFARLVGR
Ga0307468_1010235363	3300031740	Hardwood Forest Soil	FKAEDDGDGTYDGQIGHVYLHLDDGSTGDEGRDLGFVTLAEAAKIAQEHGAELDVDGPTREEWDRPPRRSLLDRLLGR
Ga0310904_101697182	3300031854	Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTADEGRDLGFITLGQAAKIAIERDAELDIDGPTAAQWDESPRRSFFARLVGR
Ga0307406_111542402	3300031901	Rhizosphere	MGLVYFKSEDDGDGTYDGQIGHAYLHPDEEASEENEQDLGFITLAKAAEIARENGVELDVDGPTRQEWDELTAPPRRSFLHRLLGR
Ga0373959_0138086_3_215	3300034820	Rhizosphere Soil	MRVVYFKSEDEGDGTYDGQIGRAYLHLDDGSTGDEGRDLGFITLGQAAKIAIERDAELDVDGPTAAQWDES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences