NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092217

Metagenome Family F092217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092217
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 39 residues
Representative Sequence MIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDA
Number of Associated Samples 91
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 83.02 %
% of genes near scaffold ends (potentially truncated) 27.10 %
% of genes from short scaffolds (< 2000 bps) 93.46 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (55.140 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(37.383 % of family members)
Environment Ontology (ENVO) Unclassified
(83.178 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(85.981 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.22%    β-sheet: 0.00%    Coil/Unstructured: 44.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF11753DUF3310 65.42
PF06714Gp5_OB 2.80
PF10544T5orf172 1.87
PF137592OG-FeII_Oxy_5 1.87
PF04545Sigma70_r4 0.93
PF11953DUF3470 0.93
PF13237Fer4_10 0.93
PF06945DUF1289 0.93
PF00156Pribosyltran 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.14 %
All OrganismsrootAll Organisms44.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000140|LPfeb09P26500mDRAFT_c1009124All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300000152|LPjun08P12500mDRAFT_c1014993Not Available1316Open in IMG/M
3300000222|LPjun09P12500mDRAFT_1013319All Organisms → Viruses → Predicted Viral1781Open in IMG/M
3300000260|LP_A_09_P20_500DRAFT_1011516All Organisms → cellular organisms → Bacteria → Proteobacteria1411Open in IMG/M
3300001450|JGI24006J15134_10124569Not Available883Open in IMG/M
3300001589|JGI24005J15628_10111411Not Available898Open in IMG/M
3300001683|GBIDBA_10026511All Organisms → cellular organisms → Bacteria → Proteobacteria2946Open in IMG/M
3300001683|GBIDBA_10047066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Robiginitomaculum → unclassified Robiginitomaculum → Robiginitomaculum sp.1651Open in IMG/M
3300005402|Ga0066855_10283442All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M545Open in IMG/M
3300005426|Ga0066847_10029108Not Available1785Open in IMG/M
3300005427|Ga0066851_10037383Not Available1698Open in IMG/M
3300005520|Ga0066864_10044831Not Available1331Open in IMG/M
3300005945|Ga0066381_10113280Not Available770Open in IMG/M
3300005969|Ga0066369_10046088All Organisms → cellular organisms → Bacteria → Proteobacteria1556Open in IMG/M
3300006306|Ga0068469_1114291Not Available540Open in IMG/M
3300006310|Ga0068471_1250170All Organisms → cellular organisms → Bacteria → Proteobacteria1191Open in IMG/M
3300006310|Ga0068471_1519979Not Available1348Open in IMG/M
3300006310|Ga0068471_1579693Not Available2000Open in IMG/M
3300006324|Ga0068476_1476154Not Available972Open in IMG/M
3300006335|Ga0068480_1205900All Organisms → Viruses → Predicted Viral1796Open in IMG/M
3300006339|Ga0068481_1576756All Organisms → cellular organisms → Bacteria → Proteobacteria1064Open in IMG/M
3300006339|Ga0068481_1576963Not Available1981Open in IMG/M
3300006340|Ga0068503_10340346All Organisms → cellular organisms → Bacteria → Proteobacteria1150Open in IMG/M
3300006340|Ga0068503_10629995Not Available788Open in IMG/M
3300006341|Ga0068493_10249240All Organisms → cellular organisms → Bacteria → Proteobacteria1234Open in IMG/M
3300006341|Ga0068493_10613223Not Available1648Open in IMG/M
3300006346|Ga0099696_1134458All Organisms → cellular organisms → Bacteria → Proteobacteria1004Open in IMG/M
3300006416|Ga0100043_10144345All Organisms → cellular organisms → Bacteria → Proteobacteria1206Open in IMG/M
3300006752|Ga0098048_1217309All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M562Open in IMG/M
3300006753|Ga0098039_1212212All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M655Open in IMG/M
3300006753|Ga0098039_1271868Not Available568Open in IMG/M
3300006789|Ga0098054_1035548All Organisms → cellular organisms → Bacteria → Proteobacteria1939Open in IMG/M
3300006900|Ga0066376_10413427All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M770Open in IMG/M
3300006921|Ga0098060_1121640Not Available732Open in IMG/M
3300006926|Ga0098057_1089644All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M749Open in IMG/M
3300007291|Ga0066367_1129440Not Available943Open in IMG/M
3300007291|Ga0066367_1163775All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M843Open in IMG/M
3300007508|Ga0105011_1086495Not Available1260Open in IMG/M
3300007647|Ga0102855_1025776All Organisms → Viruses → Predicted Viral1618Open in IMG/M
3300007692|Ga0102823_1218324Not Available511Open in IMG/M
3300008050|Ga0098052_1239327All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M696Open in IMG/M
3300008629|Ga0115658_1076381Not Available1946Open in IMG/M
3300009008|Ga0115649_1131576Not Available2224Open in IMG/M
3300009104|Ga0117902_1264134All Organisms → cellular organisms → Bacteria → Proteobacteria1629Open in IMG/M
3300009104|Ga0117902_1323555Not Available1413Open in IMG/M
3300009173|Ga0114996_10427029Not Available1011Open in IMG/M
3300009173|Ga0114996_10821693All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M671Open in IMG/M
3300009409|Ga0114993_10330059All Organisms → Viruses → Predicted Viral1156Open in IMG/M
3300009593|Ga0115011_10115849All Organisms → Viruses → Predicted Viral1910Open in IMG/M
3300009619|Ga0105236_1047737Not Available564Open in IMG/M
3300009786|Ga0114999_11097354Not Available571Open in IMG/M
3300009790|Ga0115012_10186299All Organisms → Viruses → Predicted Viral1515Open in IMG/M
3300010155|Ga0098047_10195572Not Available776Open in IMG/M
3300010883|Ga0133547_11403969All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M1318Open in IMG/M
3300017715|Ga0181370_1004267Not Available1848Open in IMG/M
3300017775|Ga0181432_1012209Not Available2112Open in IMG/M
3300017775|Ga0181432_1206066Not Available617Open in IMG/M
3300020243|Ga0211655_1014293All Organisms → cellular organisms → Bacteria → Proteobacteria1208Open in IMG/M
3300020256|Ga0211645_1018653Not Available1179Open in IMG/M
3300020277|Ga0211568_1078749All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300020347|Ga0211504_1112800Not Available607Open in IMG/M
3300020358|Ga0211689_1165282Not Available611Open in IMG/M
3300020369|Ga0211709_10092692All Organisms → cellular organisms → Bacteria → Proteobacteria935Open in IMG/M
3300020389|Ga0211680_10288855All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M610Open in IMG/M
3300020399|Ga0211623_10055501Not Available1348Open in IMG/M
3300020415|Ga0211553_10293504Not Available658Open in IMG/M
3300020427|Ga0211603_10226382Not Available704Open in IMG/M
3300021068|Ga0206684_1221014Not Available606Open in IMG/M
3300021084|Ga0206678_10320475All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M742Open in IMG/M
3300021084|Ga0206678_10519491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M546Open in IMG/M
3300021442|Ga0206685_10303991All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M542Open in IMG/M
3300021959|Ga0222716_10272357All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300021960|Ga0222715_10431494Not Available714Open in IMG/M
3300025049|Ga0207898_1045232Not Available546Open in IMG/M
3300025052|Ga0207906_1031721Not Available726Open in IMG/M
3300025103|Ga0208013_1029216All Organisms → Viruses → Predicted Viral1583Open in IMG/M
3300025128|Ga0208919_1252086All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M512Open in IMG/M
3300025133|Ga0208299_1202157Not Available588Open in IMG/M
3300025268|Ga0207894_1078689Not Available561Open in IMG/M
3300025776|Ga0208699_1038518Not Available554Open in IMG/M
3300026074|Ga0208747_1061101Not Available807Open in IMG/M
3300026210|Ga0208642_1081143Not Available712Open in IMG/M
3300026213|Ga0208131_1137979All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M579Open in IMG/M
3300026253|Ga0208879_1288560All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M600Open in IMG/M
3300027700|Ga0209445_1203769Not Available537Open in IMG/M
3300027838|Ga0209089_10246994Not Available1035Open in IMG/M
3300027906|Ga0209404_10099124All Organisms → Viruses → Predicted Viral1721Open in IMG/M
3300028190|Ga0257108_1125371Not Available753Open in IMG/M
3300028190|Ga0257108_1153290All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M668Open in IMG/M
3300028192|Ga0257107_1040128All Organisms → Viruses → Predicted Viral1462Open in IMG/M
3300028192|Ga0257107_1096638Not Available884Open in IMG/M
3300028488|Ga0257113_1155634Not Available685Open in IMG/M
3300028489|Ga0257112_10142110All Organisms → cellular organisms → Bacteria → Proteobacteria858Open in IMG/M
3300028489|Ga0257112_10271868Not Available575Open in IMG/M
3300028535|Ga0257111_1182023Not Available631Open in IMG/M
3300031143|Ga0308025_1013532All Organisms → Viruses → Predicted Viral3319Open in IMG/M
3300031644|Ga0308001_10150286Not Available952Open in IMG/M
3300031695|Ga0308016_10036430All Organisms → Viruses → Predicted Viral2127Open in IMG/M
3300031696|Ga0307995_1163737Not Available815Open in IMG/M
3300031757|Ga0315328_10292152Not Available952Open in IMG/M
3300031757|Ga0315328_10636444Not Available607Open in IMG/M
3300031851|Ga0315320_10252169All Organisms → Viruses → Predicted Viral1278Open in IMG/M
3300031886|Ga0315318_10127253Not Available1427Open in IMG/M
3300032130|Ga0315333_10378111All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M669Open in IMG/M
3300032278|Ga0310345_10422059Not Available1261Open in IMG/M
3300032820|Ga0310342_102089025Not Available678Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine37.38%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine11.21%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.35%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater8.41%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine7.48%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine5.61%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine4.67%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.74%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.87%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.87%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.87%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume1.87%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.87%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000140Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500mEnvironmentalOpen in IMG/M
3300000152Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500mEnvironmentalOpen in IMG/M
3300000222Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500mEnvironmentalOpen in IMG/M
3300000260Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005426Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005520Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251EnvironmentalOpen in IMG/M
3300005945Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_BEnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006306Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006335Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006346Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770mEnvironmentalOpen in IMG/M
3300006416Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300007291Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300007508Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008629Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009008Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7umEnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020243Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556050-ERR599055)EnvironmentalOpen in IMG/M
3300020256Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556010-ERR599067)EnvironmentalOpen in IMG/M
3300020277Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556102-ERR599152)EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020358Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)EnvironmentalOpen in IMG/M
3300020369Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)EnvironmentalOpen in IMG/M
3300020389Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)EnvironmentalOpen in IMG/M
3300020399Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)EnvironmentalOpen in IMG/M
3300020415Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)EnvironmentalOpen in IMG/M
3300020427Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)EnvironmentalOpen in IMG/M
3300021068Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025776Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)EnvironmentalOpen in IMG/M
3300026074Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026210Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)EnvironmentalOpen in IMG/M
3300026213Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)EnvironmentalOpen in IMG/M
3300026253Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300027700Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028488Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320mEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300028535Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500mEnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032130Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LPfeb09P26500mDRAFT_100912423300000140MarineMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYEDA*
LPjun08P12500mDRAFT_101499343300000152MarineMIILAYIIVTFALIGLLSNFFFIFFEEANNELNKTEKEKKL*
LPjun09P12500mDRAFT_101331923300000222MarineMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNKEYEDA*
LP_A_09_P20_500DRAFT_101151653300000260MarineMIILAYIIVAYALIGLLSMFFFIFFEEANDKLNKEYEDA*
JGI24006J15134_1012456913300001450MarineMIQTILAYTIVTLALIGLLSNFFFIFCMEANDKLNESI*
JGI24005J15628_1011141113300001589MarineMIQTILAYTIVTLALIGLCSNFFFIFCMEANDKLNESI*
GBIDBA_1002651123300001683Hydrothermal Vent PlumeMIILAYTIVTFALIGLLSNFFFIFFEEANNELNKEYEDE*
GBIDBA_1004706613300001683Hydrothermal Vent PlumeMIQTILATFIVSIAAIGLLSNFFFVFFMDANDKLNEEYEDA
Ga0066855_1028344223300005402MarineMTILAYIIVTYALIGLLSNFFFVFFMDANDKLNEEYENE*
Ga0066847_1002910853300005426MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYKDD*
Ga0066851_1003738343300005427MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDD*
Ga0066864_1004483143300005520MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKPEKEKKL*
Ga0066381_1011328023300005945MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYK*
Ga0066369_1004608833300005969MarineMIQTILAYTIVTFALIGLLSNFFFIFFEEANNELNKDYKNE*
Ga0068469_111429113300006306MarineAYIIVAYALIGLLSMFFFIFYEEANYKLNEEYEDA*
Ga0068471_125017023300006310MarineMIILAYVIVAFALIGLLSNFFFIFFEEANNELNKEYEDE*
Ga0068471_151997943300006310MarineMIILAYVIVTFALIGLLSNFFFIFFEEANNELNKEYEDA*
Ga0068471_157969333300006310MarineMIILAYTIVTFALIGLLSNFFFVFFMDANDKLNEEYE*
Ga0068476_147615433300006324MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDA*
Ga0068480_120590043300006335MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDD*
Ga0068481_157675623300006339MarineMIQTILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDA*
Ga0068481_157696353300006339MarineMIILAYAIVTFALIGLLSNFFFVFFMDANDKLNEEYEDE*
Ga0068503_1034034623300006340MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYKDD*
Ga0068503_1062999523300006340MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDE*
Ga0068493_1024924023300006341MarineMIILAYIIVTFALIGLLSNFFFIFFEEANNELNKEYEDE*
Ga0068493_1061322343300006341MarineMIILAYAIVTFALIGLLSNFFFIFFEEANDELNKDYKDD*
Ga0099696_113445833300006346MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYKDE*
Ga0100043_1014434543300006416MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYE*
Ga0098033_111231313300006736MarineMIQTILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYEKAWQA
Ga0098048_121730923300006752MarineMIILAYAIVTFALIGLLSNFFFIFFEEANDKLNKEYEDAES*
Ga0098039_121221233300006753MarineVEILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYEKA
Ga0098039_127186813300006753MarineMIQTILAYAIVTFALIGLLSNFFFIFFEEANNELN
Ga0098054_103554813300006789MarineIVTFALIGLLSNFFFIFFEEANDKLNKEYEDAES*
Ga0066376_1041342733300006900MarineMIQTILATFIVSIAAIGLLSNFFFVFFMDANDKLNEEYEDE*
Ga0098060_112164033300006921MarineMIILAYAIVTFALIGLLSNFFFILFEEANNELNKEYKDD*
Ga0098057_108964413300006926MarineMIQTILAYAIVTFALIGLLSNFFFIFFEEANNELNEE
Ga0066367_112944043300007291MarineYIIVTFALIGLLSNFFFIFFEEANNELNKIENERI*
Ga0066367_116377523300007291MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYENE*
Ga0105011_108649533300007508MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDE*
Ga0102855_102577623300007647EstuarineMIQTILAYTIVTLALIGLLSNFFFIFFMEANDKLN
Ga0102823_121832423300007692EstuarineMILAYTIVTFALIGLLSNFFFIFFEEANNELNKEYKDD*
Ga0098052_123932733300008050MarineMVEILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYEKAWQ
Ga0115658_107638133300008629MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKTKKEKKL*
Ga0115649_113157633300009008MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKTEKEKKL*
Ga0117902_126413413300009104MarineILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDE*
Ga0117902_132355513300009104MarineMIILAYAIITFALIGLLSNFFFIFFEEANNELNKEYKDE*
Ga0114996_1042702913300009173MarineMIQTILATVIVSIAAIGLLSNFFFVFFMDANDKLNEEFIDV*
Ga0114996_1082169323300009173MarineMIQTILAYTIVTYALVGLLSMFFFIFFEEANNELNKKYEDE*
Ga0114993_1033005933300009409MarineMIQTILAYTIVTYALVGLLSMFFFIFFEEANNELNKEYEDA*
Ga0115011_1011584963300009593MarineMQILAYAIVTFALIGLLSNFFFIFFEEANNKLNEEFKDD*
Ga0105236_104773723300009619Marine OceanicMIILAYAIVTFALIGLLSNFFFIFFEEANNKLNKEYEND*
Ga0114999_1109735413300009786MarineTGPLQMIILAYIIVTYALIGLLSMFFFIFFEEANDKLNKEYEDA*
Ga0115012_1018629953300009790MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEFKDD*
Ga0098047_1019557213300010155MarineILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYE*
Ga0133547_1140396953300010883MarineMIQTILAYTIVTYALIGLLSMFFFIFFEEANNELNKEYKDE*
Ga0181370_100426723300017715MarineMIILAYAIVTFALIGLLSNFFFIFFEEVNNELNKEYEKAWQATTI
Ga0181432_101220943300017775SeawaterMIILAYIIVTFALIGLLSNFFFIFFEEANNELNKEYKDD
Ga0181432_120606623300017775SeawaterMIQTILAYTIVTYALVGLLSMFFFIFFEEANNELNKDYE
Ga0211655_101429323300020243MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDD
Ga0211645_101865313300020256MarineVEILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYKDD
Ga0211568_107874933300020277MarinePLQMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDD
Ga0211504_111280013300020347MarineMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYEDA
Ga0211689_116528213300020358MarineMIQTILAYTIVTLALIGLLSNFFFIFCMEANDKLN
Ga0211709_1009269223300020369MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYE
Ga0211680_1028885533300020389MarineMIQTILAYTIVTFALIGLLSNFFFVFFMDANDKLNEEYEDE
Ga0211623_1005550143300020399MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDYK
Ga0211553_1029350413300020415MarineMIQTILAYTIVTFALIGLLSNFFFIFFEEANNELNKEYEDA
Ga0211603_1022638233300020427MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYK
Ga0206684_122101433300021068SeawaterITGPLQMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYEDA
Ga0206678_1032047523300021084SeawaterMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYK
Ga0206678_1051949123300021084SeawaterMIILAYIIVAYALIGLLSMFFFIFFEEANDKLNEEYKDA
Ga0206685_1030399123300021442SeawaterMIILAYIIVTFALIGLLSNFFFVFFMDANDKLNEEYKDD
Ga0222716_1027235723300021959Estuarine WaterMIILAYAIVTFALIGLLSNFFFVFFMDANDKLNEEYEDE
Ga0222715_1043149413300021960Estuarine WaterMIILAYIIVTYALIGLLSMFFFVFFMDANDKLNEEY
Ga0207898_104523223300025049MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKTEKEKKL
Ga0207906_103172123300025052MarineMIILAYAIVTFALIGLLSNFLFVFFMDANDKLNEEYEDE
Ga0208013_102921663300025103MarineMIILAYAIVTFALIGLLSNFFFIFFEEANDKLNKEYEDAES
Ga0208919_125208623300025128MarineMIILAYIIVTYALIGLLSMFFFIFFEEANNKLNEEYEDA
Ga0208299_120215713300025133MarineVEILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYEKAWQ
Ga0207894_107868933300025268Deep OceanITGPLQMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYKDD
Ga0208699_103851813300025776Deep OceanMIILAYAIVTFALIGLLSNFFFIFFEEANNELNEEYEKAWQAC
Ga0208747_106110123300026074MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDA
Ga0208642_108114323300026210MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKPEKEKKL
Ga0208131_113797923300026213MarineMTILAYIIVTYALIGLLSNFFFVFFMDANDKLNEEYENE
Ga0208879_128856023300026253MarineMIQTILAYTIVTFALIGLLSNFFFIFFEEANNELNKDYKNE
Ga0209445_120376913300027700MarineMIILAYAIVTFALIGLLSNFFFVFFMDANNKLNEEYEDE
Ga0209089_1024699423300027838MarineMIQTILAYTIVTFALIGLLSNFFFIFFEEANNELNKEYKDE
Ga0209404_1009912423300027906MarineMQILAYAIVTFALIGLLSNFFFIFFEEANNKLNEEFKDD
Ga0257108_112537113300028190MarineMIQMILAYTIVTFALIGLLSNFFFIFFEEANNELNQSQSGGT
Ga0257108_115329023300028190MarineMILAYAIVTFALIGLLSNFFFVFFEEANNELNKEYEDE
Ga0257107_104012823300028192MarineMIILAYIIVTFALIGLLSNFFFIFFEEANNELNKTEKEKKL
Ga0257107_109663823300028192MarineMIQTILAYTIVTYALVGLLSMFFFIFFEEANNELNKEYEDE
Ga0257113_115563423300028488MarineMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEYEDE
Ga0257112_1014211033300028489MarineSIIGGPLQMILAYAIVTFALIGLLSNFFFVFFEEANNELNKEYEDE
Ga0257112_1027186823300028489MarineMIILAYIIVTFALIGLLSNFFFIFFEEANNELNKDYKDD
Ga0257111_118202313300028535MarineITGPLQMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNKEYEDA
Ga0308025_101353263300031143MarineMIQTILAYTIVTLALVGLLSNFFFIFCMDANDKLNESI
Ga0308001_1015028613300031644MarineMIQTILAYTIVTLALIGLLSNFFFIFCMDANDKLN
Ga0308016_1003643013300031695MarineMIQTILAYTIVTLALIGLLSNFFFIFCMEANDKLNES
Ga0307995_116373713300031696MarineMIQTILAYTIVTLAAIGLLSNFFFIFCMEANDKLNES
Ga0315328_1029215233300031757SeawaterMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNQSQND
Ga0315328_1063644413300031757SeawaterMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKDD
Ga0315320_1025216913300031851SeawaterLQMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYEDA
Ga0315318_1012725353300031886SeawaterITGPLQMIILAYIIVAYALIGLLSMFFFIFFEEANNKLNEEYK
Ga0315333_1037811123300032130SeawaterMIILAYAIVTFALIGLLSNFFFIFFEEANNELNKEFKDD
Ga0310345_1042205943300032278SeawaterMIILAYIIVAYALIGLLSMFFFIFFEEANDKLNKEYEDA
Ga0310342_10208902513300032820SeawaterMIILAYIIVAYALIGLLSMFFFIFFEEANDKLNKEYED


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