NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092129

Metagenome / Metatranscriptome Family F092129

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092129
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 81 residues
Representative Sequence MTITLNDEQARLLAEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFRGLDMDFERDQDTGRDIAL
Number of Associated Samples 99
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.18 %
% of genes near scaffold ends (potentially truncated) 15.89 %
% of genes from short scaffolds (< 2000 bps) 81.31 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (66.355 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(10.280 % of family members)
Environment Ontology (ENVO) Unclassified
(30.841 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.664 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.11%    β-sheet: 0.00%    Coil/Unstructured: 67.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF01850PIN 25.23
PF10543ORF6N 6.54
PF04255DUF433 2.80
PF04014MazE_antitoxin 2.80
PF04362Iron_traffic 1.87
PF03683UPF0175 1.87
PF00196GerE 0.93
PF05222AlaDh_PNT_N 0.93
PF11937DUF3455 0.93
PF12705PDDEXK_1 0.93
PF05258DciA 0.93
PF13620CarboxypepD_reg 0.93
PF02698DUF218 0.93
PF01842ACT 0.93
PF00595PDZ 0.93
PF08668HDOD 0.93
PF00589Phage_integrase 0.93
PF00005ABC_tran 0.93
PF00180Iso_dh 0.93
PF07843DUF1634 0.93
PF01926MMR_HSR1 0.93
PF01833TIG 0.93
PF16640Big_3_5 0.93
PF08681DUF1778 0.93
PF03764EFG_IV 0.93
PF00082Peptidase_S8 0.93
PF01610DDE_Tnp_ISL3 0.93
PF01872RibD_C 0.93
PF08241Methyltransf_11 0.93
PF01139RtcB 0.93
PF00291PALP 0.93
PF07690MFS_1 0.93
PF13544Obsolete Pfam Family 0.93
PF030614HBT 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG2924Fe-S cluster biosynthesis and repair protein YggXPosttranslational modification, protein turnover, chaperones [O] 3.74
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 2.80
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 1.87
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.93
COG0480Translation elongation factor EF-G, a GTPaseTranslation, ribosomal structure and biogenesis [J] 0.93
COG1434Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 familyCell wall/membrane/envelope biogenesis [M] 0.93
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.93
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.93
COG2949Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycinCell wall/membrane/envelope biogenesis [M] 0.93
COG3464TransposaseMobilome: prophages, transposons [X] 0.93
COG4272Uncharacterized membrane proteinFunction unknown [S] 0.93
COG4453Uncharacterized conserved protein, DUF1778 familyFunction unknown [S] 0.93
COG5512Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)General function prediction only [R] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.36 %
UnclassifiedrootN/A33.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004152|Ga0062386_100805389All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005340|Ga0070689_102113107All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300005607|Ga0070740_10160890Not Available964Open in IMG/M
3300005938|Ga0066795_10160704Not Available670Open in IMG/M
3300005947|Ga0066794_10059967All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300005947|Ga0066794_10088122All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300005995|Ga0066790_10082998All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300006358|Ga0068871_102042052All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300006794|Ga0066658_10864005All Organisms → cellular organisms → Bacteria → Proteobacteria516Open in IMG/M
3300006795|Ga0075520_1050411All Organisms → cellular organisms → Bacteria1999Open in IMG/M
3300006795|Ga0075520_1096874All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300006845|Ga0075421_100019812All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia8449Open in IMG/M
3300006854|Ga0075425_101743655All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300006893|Ga0073928_10242120All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300006949|Ga0075528_10140408All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300009012|Ga0066710_102904315All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300009029|Ga0066793_10087670All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60761794Open in IMG/M
3300009098|Ga0105245_10078656All Organisms → cellular organisms → Bacteria3009Open in IMG/M
3300009147|Ga0114129_10369227All Organisms → cellular organisms → Bacteria1897Open in IMG/M
3300009175|Ga0073936_10012789All Organisms → cellular organisms → Bacteria9952Open in IMG/M
3300009177|Ga0105248_10240109All Organisms → cellular organisms → Bacteria2040Open in IMG/M
3300009623|Ga0116133_1153232Not Available605Open in IMG/M
3300009627|Ga0116109_1171540Not Available512Open in IMG/M
3300009632|Ga0116102_1141837All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella665Open in IMG/M
3300009698|Ga0116216_10862101Not Available542Open in IMG/M
3300009764|Ga0116134_1239832Not Available626Open in IMG/M
3300009764|Ga0116134_1259194All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300009824|Ga0116219_10726815Not Available542Open in IMG/M
3300010341|Ga0074045_10284621All Organisms → cellular organisms → Bacteria → Proteobacteria1087Open in IMG/M
3300010399|Ga0134127_10341219Not Available1459Open in IMG/M
3300010400|Ga0134122_13391811All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012093|Ga0136632_10545007All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012189|Ga0137388_11991652Not Available509Open in IMG/M
3300012362|Ga0137361_11369493All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012363|Ga0137390_11658300Not Available575Open in IMG/M
3300012469|Ga0150984_119854643Not Available667Open in IMG/M
3300012533|Ga0138256_10018880All Organisms → cellular organisms → Bacteria7231Open in IMG/M
3300012533|Ga0138256_10097612All Organisms → cellular organisms → Bacteria2806Open in IMG/M
3300012533|Ga0138256_10146086All Organisms → cellular organisms → Bacteria2180Open in IMG/M
3300012683|Ga0137398_10450821All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300013297|Ga0157378_11470520All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300014158|Ga0181521_10234828All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300014162|Ga0181538_10196665Not Available1134Open in IMG/M
3300014199|Ga0181535_10691598Not Available581Open in IMG/M
3300014489|Ga0182018_10001657All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus24670Open in IMG/M
3300014492|Ga0182013_10016965All Organisms → cellular organisms → Bacteria → Acidobacteria6878Open in IMG/M
3300014492|Ga0182013_10463133Not Available667Open in IMG/M
3300014493|Ga0182016_10024183All Organisms → cellular organisms → Bacteria → Proteobacteria5296Open in IMG/M
3300014493|Ga0182016_10364438Not Available865Open in IMG/M
3300014494|Ga0182017_10066704All Organisms → cellular organisms → Bacteria → Acidobacteria2381Open in IMG/M
3300014498|Ga0182019_10971888Not Available615Open in IMG/M
3300014501|Ga0182024_12333228All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300017789|Ga0136617_10162233All Organisms → cellular organisms → Bacteria → Acidobacteria1901Open in IMG/M
3300017948|Ga0187847_10041037All Organisms → cellular organisms → Bacteria → Acidobacteria2693Open in IMG/M
3300017988|Ga0181520_10375090All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300018019|Ga0187874_10217845All Organisms → cellular organisms → Bacteria → Proteobacteria789Open in IMG/M
3300018022|Ga0187864_10136108Not Available1231Open in IMG/M
3300018062|Ga0187784_11027290Not Available655Open in IMG/M
3300018476|Ga0190274_13575805Not Available525Open in IMG/M
3300019786|Ga0182025_1256448All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1862Open in IMG/M
3300020074|Ga0194113_10397300Not Available1014Open in IMG/M
3300020195|Ga0163150_10324056Not Available742Open in IMG/M
3300020198|Ga0194120_10161326Not Available1312Open in IMG/M
3300021424|Ga0194117_10106832All Organisms → cellular organisms → Bacteria → Acidobacteria1485Open in IMG/M
3300021478|Ga0210402_10021240All Organisms → cellular organisms → Bacteria5564Open in IMG/M
3300021976|Ga0193742_1046743All Organisms → cellular organisms → Bacteria → Proteobacteria1892Open in IMG/M
3300022555|Ga0212088_10144011Not Available2032Open in IMG/M
3300022557|Ga0212123_10186479All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300022721|Ga0242666_1046129All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117907Open in IMG/M
3300022881|Ga0224545_1014573All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300023258|Ga0224535_1136297Not Available515Open in IMG/M
3300025320|Ga0209171_10127772All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300025481|Ga0208079_1034221Not Available1320Open in IMG/M
3300025484|Ga0208587_1060634All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300025533|Ga0208584_1064582All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300025650|Ga0209385_1129500All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300025725|Ga0209638_1005226All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus7479Open in IMG/M
3300025857|Ga0209014_10080180All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300025878|Ga0209584_10189423Not Available782Open in IMG/M
3300025888|Ga0209540_10125197All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300025903|Ga0207680_10245510All Organisms → cellular organisms → Bacteria → Acidobacteria1235Open in IMG/M
3300025927|Ga0207687_10126847All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300026095|Ga0207676_11190788All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300026223|Ga0209840_1139176Not Available514Open in IMG/M
3300026319|Ga0209647_1120346All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300027745|Ga0209908_10051569All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus911Open in IMG/M
3300027812|Ga0209656_10017565All Organisms → cellular organisms → Bacteria → Acidobacteria4413Open in IMG/M
3300027909|Ga0209382_10023415All Organisms → cellular organisms → Bacteria → Acidobacteria7478Open in IMG/M
(restricted) 3300028569|Ga0247843_1004920All Organisms → cellular organisms → Bacteria19302Open in IMG/M
3300029817|Ga0247275_1079715All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300029883|Ga0311327_10561378Not Available691Open in IMG/M
3300029907|Ga0311329_10836396Not Available584Open in IMG/M
3300029911|Ga0311361_10376471All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300029954|Ga0311331_10905581All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium779Open in IMG/M
3300030047|Ga0302286_10523392Not Available602Open in IMG/M
3300030688|Ga0311345_11080172Not Available595Open in IMG/M
3300031231|Ga0170824_118131185Not Available676Open in IMG/M
3300031232|Ga0302323_101522049All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300031232|Ga0302323_101549401All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076747Open in IMG/M
3300031239|Ga0265328_10404802Not Available536Open in IMG/M
3300031344|Ga0265316_10056039All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales3081Open in IMG/M
3300031788|Ga0302319_11074553Not Available758Open in IMG/M
3300032160|Ga0311301_11313835All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300032897|Ga0335071_10032120All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia5219Open in IMG/M
3300032955|Ga0335076_11637507Not Available532Open in IMG/M
3300034281|Ga0370481_0310040Not Available573Open in IMG/M
3300034282|Ga0370492_0079690All Organisms → cellular organisms → Bacteria → Acidobacteria1341Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil10.28%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog5.61%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil4.67%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.74%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog3.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.80%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.80%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.80%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.80%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.80%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge2.80%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion1.87%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.87%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.87%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.87%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.93%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.93%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.93%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.93%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009627Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012533Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MGEngineeredOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020195Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IBEnvironmentalOpen in IMG/M
3300020198Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65mEnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021976Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1EnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300023258Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34EnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025484Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025650Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)EnvironmentalOpen in IMG/M
3300025725Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026223Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030047Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0062386_10080538913300004152Bog Forest SoilMMAVTITLNEDQARLLSEAVKAGAASSPGEAIDQVVRAFHSLATAKRPMVNVDNLADLFASSPFRGLKMDFERDPDTGRDIESSQRPTMP*
Ga0070689_10211310713300005340Switchgrass RhizosphereMTITLNDEQARLLAEVVEAGAARSPEDAVDQAVRALHSSTTGKRATHQQVDNLADLFAKSPFHGLDMDFERDQDTGRHIAL*
Ga0070740_1016089013300005607Surface SoilVTITLNDEQARLLSEVIEAGVARSPEEAVDQAVRALHSSTRSKRPVHQQVDNLAGLFAKSPFRGLDMDFERDQDSGRDLAL*
Ga0066795_1016070413300005938SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQMDNLADLFAKSPFHGLDMDFGRDQDTGRDIAL*
Ga0066794_1005996723300005947SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQMDNLADLFAKSPFRGLDMDFERDKDTGRDIAL*
Ga0066794_1008812213300005947SoilMTNDCRRWSKRNRAARSPEDAVDQAVRALHSSTTGKRPVHRQVDNLADLFAKSPFHGLDMDFGRDQDTGRDIAL*
Ga0066790_1008299833300005995SoilMTITLSDEQTRSLSEVVKAGIARSTEEALDQAVRAFHSSATAKKPVHRQVDNLPDLFARSPFRGLAMTFERDRDTGRDRSLRMVILSIRISFPD*
Ga0068871_10204205223300006358Miscanthus RhizosphereMTITLNDEQARLLAEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFRGLDMDFERDQDTGRDIAL*
Ga0066658_1086400523300006794SoilMTITLSDEQARLLSEVVKTGVARSPEEAVDQAVRALHSSATGKKPVHQQVDNLADLFAKSPFRGLDMDFERDQDTGRDIAL*
Ga0075520_105041133300006795Arctic Peat SoilMTITLNDEQARLLSEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDMDFERDTDTGRDIAL*
Ga0075520_109687413300006795Arctic Peat SoilVERERSRSYAITPNDEQVRLPAEVVKAGAARSPEDAVDQAVGALHSSTTRKRPVHQQVDNLAGLFAKSPFHGLDMDFGRDRDTGRDIAL*
Ga0075421_10001981263300006845Populus RhizosphereMTITLNEEQARLVTEVVNAGAARSAEEAVDQAVRALHASAVKAHTVHQEVDNLADLFARSPFRGLDMEFERDRDPGRDVPL*
Ga0075425_10174365523300006854Populus RhizosphereMTITLNDEQARLLSEVVKAGAARSPEEAVDQALRTLHSLATDKRPVHQQVDNLADLFAKSPFRGLDMDFERDKDTGRDIAL*
Ga0073928_1024212033300006893Iron-Sulfur Acid SpringRMDANNVTEGLRSFTLKNGREFFAVTINLNDEQTRLLSEVVRTGAARSTEEAVDQAVRALHSRTTGKRPVFQQVDNLADLFARSPFRGLDIEFERDKDAGRDIAL*
Ga0075528_1014040823300006949Arctic Peat SoilMTITLNDEQARLLSEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFRGLDMDFERD*
Ga0066710_10290431523300009012Grasslands SoilMTVTLNDEQARLLSEMIVAGVAKSPEEAVDKAVRALHYSAISRRPVYQSVDNLADVFAKSPFRGLNMDFERDSPESLGSFMSDLPALYS
Ga0066793_1008767033300009029Prmafrost SoilMTNDCRRWSKRNRAARSPEDAVDQAVRALHSSTTGKRPVHRQVDNLADLFAKSPFRGLDMDFERDEDTGRDIAL*
Ga0105245_1007865633300009098Miscanthus RhizosphereMTITLNEEQTRLLTEVVKAGAARSPEDAVDQAVRALHSTTAGKRPVHQKVDNLADLFAKSPFRGLNMEFERDKDTGRDIAL*
Ga0114129_1036922733300009147Populus RhizosphereMTITLNEEQARLVTEVVNAGAARSAEEAVDQAVRALHASAVKAHTVHQEVDSLADLFARSPFRGLDM
Ga0073936_1001278973300009175Freshwater Lake HypolimnionMTITLNDELTRLLSEVVSAGGAQSTEEAVDRAVRALHSSASADRPVHQQVDNLADLFAKSPFRGLDMNFERDQDTGRDISL*
Ga0105248_1024010933300009177Switchgrass RhizosphereMTITLNDEQARLLAEVVEAGAARSPEDAVDQAVRALHSSTTGKRATHQQVDNLADLFAKSPFHGLDMDFERDQDTGRDIAL*
Ga0116133_115323223300009623PeatlandMTITLNEEQARLLSELVKAGAARSPEEAVDQAVRALHSSTTGKKPVHQQVDNLADLFAKSPFRGLDMEFERDKDSGRDIAL*
Ga0116109_117154023300009627PeatlandVVKAGAARSTEEAVDQAVRALHSSATTNKPVHRQVDNLADLFAKSPFRGLDMVFERDKDPGRDISL*
Ga0116102_114183723300009632PeatlandMTITLNDEQERLLSEVVKAGAASSAEEAVDRAVRIFHSLATGTRPVYRQVDNLADLFARSPFRGLDMDFERDKDPGEISLCERLPRRYKHPCPN*
Ga0116216_1086210113300009698Peatlands SoilMTITLSDEQARLLYEVVKAGGARSAEEAVDQAVRTLHSLTTNKRPVHQQVDNLADLLARSPFRGLDMEFEREQDAGRDIAL*
Ga0116134_123983223300009764PeatlandMTITLSDEQARLLSEVVEAGAARSPEEAVDRALRALHSSTTSKNPVHQQVDNLADLFAKSPFRGLDMDFEREQDSGRDIAL*
Ga0116134_125919413300009764PeatlandVIPSTAIRETGGSAARSPEEAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDIDFERDKDTGRDIAL*
Ga0116219_1072681513300009824Peatlands SoilMTITLSDEQARLLYEVVKAGGARSAEEAVDQAVRTLHSLTTNKRPVHQQVDNLADLFARSPFRGLDMEFEREQDAGRDIAL*
Ga0074045_1028462123300010341Bog Forest SoilMTITLNEEQTRLVLEVVSAGVARSPEEAVDKAVKALHYTATSSRPVHEQVDNLADLFARSPFRGLNMEFERDKDIGRDVVL*
Ga0134127_1034121923300010399Terrestrial SoilMMTITLNDEQTRLLSEVVQAGGAQSAEAALDRAVRALHSSAVTKRPVHQQVDNLADLFAKSPFRGLDMTFERDKDTGRDVSL*
Ga0134122_1339181113300010400Terrestrial SoilMTITLSDEQARLLSEVVKAGVARSPEEAVDQAVRALHSSATVKRPVYQQVDNLADLFAKSPFRGLDMDFERDKDTGRDIAL*
Ga0136632_1054500723300012093Polar Desert SandMTITLNDEQTRLLFEVVKAGTARSPEEAVDQAVRALHSSATRGGPVHRKVDNLADLFAKSPFRGLDMDFERDQDTGRDIDL*
Ga0137388_1199165213300012189Vadose Zone SoilWKEKGVASMTITLNDEQARLLSEVVKAGAARSPEEAVDQAVRTLHSLATGKRPVHQHVDNLADLFAKSPFRGLDMDFERDKDTGRDIAL*
Ga0137361_1136949323300012362Vadose Zone SoilMTITLNDEQSRLLTEVVKAGAARSPEEAVDRAVRALHSLATGTRPVHQQVDNLADLFAKSPFRGLDMDFERDKDIGRDIAL*
Ga0137390_1165830023300012363Vadose Zone SoilMTPVRFSGNVDQGRSYTMTITLSDEQSRLLEEMVKAGIAGSPEEAVDRAVRALHSSATTKQPIYLQVDNLADLFARSPFRSLDMEFERD
Ga0150984_11985464313300012469Avena Fatua RhizosphereRHPVMWKKGAFMTIILSDEQTRLLSEVVKAGAAGSTEDAVDKAVRALHSSAVGEKPVHQQVDNLADLFARSPFHGIDMDFERDPDPGRDIAL*
Ga0138256_1001888073300012533Active SludgeMPITLSDEQTRLLDEVVKAGVARSPEEAVDQAVRRLHSSATRQKPVHQQVDNLADLFAHSPFRGLNMEFERDPDTGRDISL*
Ga0138256_1009761223300012533Active SludgeVVKAGAARSTEEAVDQAVRALHSSATSRKPVHTQVDNLADLFARSSFRGLNIEFERDKHTGWDIAL*
Ga0138256_1014608633300012533Active SludgeMTITLNDEQARLLSEVVKAGAARSTEEAVDQAVRAFHSSATSRRPVHTQVDNLADLFARSPFRGLNIEFERDQDTGRDIAL*
Ga0137398_1045082123300012683Vadose Zone SoilDEQARLLSEVVNAGAARSPEEAVDQAVRALHSSTIGKRPIHQQVDNLADLFAKSPFHGLDMDFERDQDTGRDIAL*
Ga0157378_1147052013300013297Miscanthus RhizosphereEQARLLAEVVEAGAARSPEDAVDQAVRALHSSTTGKRATHQQVDNLADLFAKSPFHGLDMDFERDQDTGRDIAL*
Ga0181521_1023482833300014158BogMVLLWSPALLFWELAETKKESAMTITLNDEQARLLSEVVKAGAARSPEEAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDMDFERDKDTGRDIAL*
Ga0181538_1019666523300014162BogMTITMNDEQARLLAEVVKAGAAHSPEEAVDRAVRALHSSTTGRKPVHQQVDNLADLFAKSPFRGLDMDFERDKDSGRASPS*
Ga0181535_1069159813300014199BogMTITLNEEQARLLFEVVEAGAARSPEEALDQAVRALHSSTASKKPVHQQVDNLADLFARSPFRGLNMDFERDQDTG
Ga0182018_10001657183300014489PalsaMTITLNDEQGRLLSEVVKPDAACSPEGDRAVRALHSSTTGKRPVRRQVDNLAGPFAKSPFGGLDMDFERDKDTGRDIPGTGGNGKSGFPTV*
Ga0182013_1001696533300014492BogMTITLNDDQARLLSEVVEAGAASSAEEAIDQAVRAFHSLATKKRVYQQVDNLADLFAKSPFRGLNMDFERDPDTGRDIDL*
Ga0182013_1046313323300014492BogLNDEQARLLSEMVSAGIAQSPEEAVDRAVRALHSAATSGNRVHQQVDNLADLFAKSPFHGLDMEFERDQDTGRDIQL*
Ga0182016_1002418333300014493BogMNTMTIVLNDEQARLLSEMVSAGIAQSPEEAVDRAVRALHSAATSGNRVHQQVDNLADLFAKSPFHGLDMEFERDQDTGRDIQL*
Ga0182016_1036443823300014493BogMTINLNDEQERLLSEVVKAGAASSTEEAVDQAVRALHSMATGGKRVYQQVDNLADLFARSPFRGLDMTFERDQDTGRDVSL*
Ga0182017_1006670433300014494FenMTITLNDEQARLLSEVVKAGAARSPEDAVDQAVRALHSSTTSKRPVHQQVDNLADLFAKSPFHGLDMDFERDKDTGRDIAL*
Ga0182019_1097188823300014498FenMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQVDNLADLFAKSPFHGLDMDFERDTDTGRDIAL*
Ga0182024_1233322813300014501PermafrostVVKAGAARSPEEAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDMDFERAKDTGRDIVL*
Ga0136617_1016223343300017789Polar Desert SandMTITLNDEQTRLLFEVVKAGTARSPEEAVDQAVRALHSSATRGGPVHRKVDNLADLFAKSPFRGLDMDFERDQDTGRDIDL
Ga0187847_1004103733300017948PeatlandMTITLNEEQARLLSELVKAGAARSPEEAVDQAVRALHSSTTGKKPVHQQVDNLADLFAKSPFRGLDMEFERDKDSGRDIAL
Ga0181520_1037509023300017988BogMTITLNEEQARLLSELVKAGAARSPEESVDQAVRALHSSTTGKKPVHQQVDNLADLFAKSPFRGLDMEFERDKDSGRDIAL
Ga0187874_1021784523300018019PeatlandMTITLSDEQARLLSEVVKAGAANSPEDAVDQAVRALHSSATGKRPVHQQVDNLADLFAKSPFHGLDMDFERDKGTGRDIAL
Ga0187864_1013610833300018022PeatlandMTITLNDEQERLLSEVVKAGAASSAEEAVDRAVRIFHSLATGTRPVYRQVDNLADLFARSPFRGLDMDFERDKDPGEISLCERLPRRYKHPCPN
Ga0187784_1102729023300018062Tropical PeatlandMTITLNDEQTRLLSEVVEAGAAKSPEEAVDKAVKALHSTTISRKPVYQTVDNLADLFAKSPFRGLDIVFERDQDTGRDIVL
Ga0190274_1357580523300018476SoilMTITLNDEQTHLLSEVVKAGAAKSTEDAVDKALKAFYSSATSASVPVHQQVDNLADLFARSPFRGLDMEFERDQDP
Ga0182025_125644813300019786PermafrostMTITLNDEQARLLSEVVKAGAARSPEEAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDMDFERAKDTGRDIVL
Ga0194113_1039730023300020074Freshwater LakeMTITLNEEQARLLSEVVKTGAASPTEDAGYRAVRALHSSATSSRPVYTQVDNLADLFAKSPFRGLDIEFERDQDTGRDIAL
Ga0163150_1032405613300020195Freshwater Microbial MatMPITLSDEQTRLLDEVVKAGVARSPEEAVDQAVRRLHSSATQQKPIYQQVDNLADLFAHSPFRGLNMEFERDPDTGRDISL
Ga0194120_1016132623300020198Freshwater LakeMTITLNEEQARLLSEVVKTGAASPTEDAGYRAVRALHSSATSSRPVYTQVDNLADLFAKSPFRGLDIE
Ga0194117_1010683213300021424Freshwater LakePKTGAASPTEDAGYRAVRALHSSATSSRPVYTQVDNLADLFAKSPFRGLDIEFERDQDTGRDIAL
Ga0210402_1002124053300021478SoilMTITLNDEQARLLSEVVQAGAARSTEDAVDQAVRALHSLTTGRRRIHQQVDNLADLFAKSPFHGLDMDFERDQDPGRDIAL
Ga0193742_104674343300021976SoilVTITLNDEQTRLLSEVVKAGAASSTEEAVDKALRALHSSAVGKTPVHQQVDNLADLFAKSPFRGLDIDFERDKDTSRDIGL
Ga0212088_1014401133300022555Freshwater Lake HypolimnionMTITLNDELTRLLSEVVSAGGAQSTEEAVDRAVRALHSSASADRPVHQQVDNLADLFAKSPFRGLDMNFERDQDTGRDISL
Ga0212123_1018647933300022557Iron-Sulfur Acid SpringMDANNVTEGLRSFTLKNGREFFAVTINLNDEQTRLLSEVVRTGAARSTEEAVDQAVRALHSRTTGKRPVFQQVDNLADLFARSPFRGLDIEFERDKDAGRDIAL
Ga0242666_104612933300022721SoilMTITLNEEQTRLISEVVKAGVARSPEDAVDQAVRALHSRATGKTPVYRDVDNLADLFAKSPFRGLDMDFERDRD
Ga0224545_101457323300022881SoilMTITLNDEQGRLLSEVVKPDAACSPEGDRAVRALHSSTTGKRPVRRQVDNLAGPFAKSPFGGLDMDFERDKDTGRDIPGTGGNGKSGFPTV
Ga0224535_113629713300023258SoilMTITLNDEQARLLSEVVEAGAARSPEEAVDRAVRTLHSSTTGKRPVHRQVDNLADLFAQSPFHGLDMEFERDQDAGRDIAL
Ga0209171_1012777233300025320Iron-Sulfur Acid SpringVTEGLRSFTLKNGREFFAVTINLNDEQTRLLSEVVRTGAARSTEEAVDQAVRALHSRTTGKRPVFQQVDNLADLFARSPFRGLDIEFERDKDAGRDIAL
Ga0208079_103422113300025481Arctic Peat SoilVERERSRSYAITPNDEQVRLPAEVVKAGAARSPEDAVDQAVGALHSSTTRKRPVHQQVDNLAGLFAKSPFHGLDMDFGRDQDTGRDIAL
Ga0208587_106063413300025484Arctic Peat SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQVDNLADLFAKSPFRGLDMDFERDKDTGRDIAL
Ga0208584_106458223300025533Arctic Peat SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQVDNLAGLFAKSPFHGPDMDFGRDQDTGRDIAL
Ga0209385_112950023300025650Arctic Peat SoilMTITLNDEQARLLSEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDMDFERDTDTGRDIAL
Ga0209638_100522693300025725Arctic Peat SoilMTITLNDEQARLLAEVVEAGAARSPEEAVDQAVGALHSSTTRKRPVHQQVDNLAGLFAKSPFHGLDMDFGRDRDTGRDIAL
Ga0209014_1008018033300025857Arctic Peat SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQVDNLADLFAKSPFHGLDMDFERDKDTGRDIAL
Ga0209584_1018942323300025878Arctic Peat SoilMTIALNDEQGRLLSEVVEAGAARSPEDAVDQAVRALHSSTTGQRPVHQQVDNLADLFAISPFHGLDMDFGRDQDTGRDIAL
Ga0209540_1012519723300025888Arctic Peat SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSTTGKRPVHQQVDNLAGLFAKSPFHGLDMDFGRDQDTGRDIAL
Ga0207680_1024551013300025903Switchgrass RhizosphereMTITLNDEQARLLAEVVEAGAARSPEDAVDQAVRALHSSTTGKRATHQQVDNLADLFAKSPFHGLDMDFERDQDTGRDIAL
Ga0207687_1012684733300025927Miscanthus RhizosphereMTITLNEEQTRLLTEVVKAGAARSPEDAVDQAVRALHSTTAGKRPVHQKVDNLADLFAKSPFRGLNMEFERDKDTGRDIAL
Ga0207676_1119078823300026095Switchgrass RhizosphereMTITLNDEQARLLAEVVEAGAARSPEDAVDQAVRALHSSTTGKRATHQQVDNLADLFAKSPFHGLDMDFERDQDTARDIAL
Ga0209840_113917613300026223SoilMTITLNDEQSRLLAEVVKAGAARSPEDAVDQAVRALHSSATGKRPVHQQMDNLADLFAKSPFRGLDMDFERDKDTGRDIAL
Ga0209647_112034623300026319Grasslands SoilMTITLNDEQSRLLTEVVKAGAARSPEEAVDRAVRALHSLATGTRPVHQQVDNLADLFAKSPFRGLDMDFERDKDIGRDIAL
Ga0209908_1005156933300027745Thawing PermafrostHLEVVKPDAACSPEGDRAVRALHSSTTGKRPVRRQVDNLAGPFAKSPFGGLDMDFERDKDTGRDIPGTGGNGKSGFPTV
Ga0209656_1001756523300027812Bog Forest SoilMTITLNEEQTRLVLEVVSAGVARSPEEAVDKAVKALHYTATSSRPVHEQVDNLADLFARSPFRGLNMEFERDKDIGRDVVL
Ga0209382_1002341533300027909Populus RhizosphereMTITLNEEQARLVTEVVNAGAARSAEEAVDQAVRALHASAVKAHTVHQEVDNLADLFARSPFRGLDMEFERDRDPGRDVPL
(restricted) Ga0247843_1004920163300028569FreshwaterMPITLSDEQTRLLDEVVKAGVARSPEEAVDQAVRRLHSSATRQKPIHQQVDNLADLFAHSPFRGLNMEFERDPDTGRDISL
Ga0247275_107971533300029817SoilVIPSTAIRETGGSAARSPEEAVDQAVRALHSSTTGKRPVHQQVDNLADLFAKSPFHGLDIDFERDKDTGRDIAL
Ga0311327_1056137823300029883BogVVKVGRASSTEDAVDQAVRALHSAATAAKPVYQQADNLADLFSRSPFRGLNIEFERPRSG
Ga0311329_1083639613300029907BogVRGDWRAAGLLSEVVKVGRAVSTEDAVDQAVRALHAAATTARPVYQQVDNPADLFARSPFRGLNMEFERDR
Ga0311361_1037647113300029911BogVVKVGRASSTEDAVDQAVRALHSAASAAKPVYQQADNLADLFSRSPFRGLNIEFERPRSG
Ga0311331_1090558123300029954BogMTIVLNDEQARLLSEMVSAGIAQSPEEAVDRAVRALHSAATSGNRVHQQVDNLADLFAKSPFHGLDMEFERDQD
Ga0302286_1052339213300030047FenMTITLSDEQARLLAEVVKAGAARSPEEAVEQAVRVLYVRAAGETSVHRQVDNLADLFAKSPFRGLDTDF
Ga0311345_1108017213300030688BogMTIVLNDEQARLLSEMVSAGIAQSPEEAVDRAVRALHSAATSGNRVHQQVDNLADLFAKSPFHGLDMEFERDQDTGRDIQL
Ga0170824_11813118513300031231Forest SoilMTIILNDEQTRLLSEVVEAGVAHSTEEAVDQAVRTLHSLATHPKPVHQQVDNLADLFAKSPFRGLDMNFERDKDTGRNIDL
Ga0302323_10152204923300031232FenMTITLNDEQSRLLDEVVLAGAAHSPEEAVDRALRALHSSATAGRPVHQQVDNLADLFARSPFRGLNMEFERDPDPG
Ga0302323_10154940113300031232FenMTITLSDEQVPLLAEVVNAGAAASLEEAVERAVRSLHASATGKKRVYQQVDNLADLFAKSPFRGLNMAFERDQDTGREIVL
Ga0265328_1040480223300031239RhizosphereMTITLNDEQARLLSEVVKAGAARSPEEAVDQAVRALHSSTTGRKPVHQQVDNLADLFAKSPFRGLDMDFERDKDNGRDIAL
Ga0265316_1005603933300031344RhizosphereMTITLNDEQARLLSEVVEAGAAHSHEDAVDRAVRALHSSVTGRRPVHQQVDNLADLFARSPFHGLDMEFERDPDTGRDIAL
Ga0302319_1107455323300031788BogVAAGEEVTVLTITLNDEQAELLSEVVKVGRASSTEDAVDQAVRALHSAATAARPVYQQVDNLADLFARSPFRGLNLEFERDR
Ga0311301_1131383523300032160Peatlands SoilMTITLSDEQARLLYEVVKAGGARSAEEAVDQAVRTLHSLTTNKRPVHQQVDNLADLFARSPFRGLDMEFEREQDAGRDIAL
Ga0335071_1003212053300032897SoilMTIALNDEQTRLLSEVVATGAACSTEEAVDQAVRALHSRAIGNRPVHQQVDNLADLLANSPFRGLDIEFERDKDTGRTS
Ga0335076_1163750723300032955SoilMTITLNDEQTRLLSEVVKAGVARSPEEAVDQAVRALHSSTTSKKPVYQQVDNLADLFAKSPFRGLNMEFERDKDTGRDIAL
Ga0370481_0310040_116_3613300034281Untreated Peat SoilMTITLNDEQARLLSEVVKAGAARSPEDAVDRAVRALHSSATGKRPIHQQVDNLADLFAKSPFHGLDMDFERDKDTGRDIAL
Ga0370492_0079690_394_6393300034282Untreated Peat SoilMTITLNDEQSRLLSEVVATGAAGSAEEAVDRALRAFHSSATGGKPIHEQVDNLADLFAKSPFHGLDMTFERDPDPGRDVVL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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