Metagenome / Metatranscriptome Family F092002

Basic Information
Family ID	F092002
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	74 residues
Representative Sequence	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLT
Number of Associated Samples	102
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.15 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	94.39 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (71.028 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.757 % of family members)
Environment Ontology (ENVO)	Unclassified (20.561 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.925 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.00% β-sheet: 0.00% Coil/Unstructured: 59.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07479	NAD_Gly3P_dh_C	81.31
PF00809	Pterin_bind	4.67
PF00106	adh_short	2.80
PF08241	Methyltransf_11	0.93
PF13561	adh_short_C2	0.93
PF07704	PSK_trans_fac	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	81.31
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
All Organisms	root	All Organisms	28.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
cellular organisms	root	All Organisms → cellular organisms	28.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.15 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	10.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.93 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.03 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Mycolicibacterium mageritense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium mageritense	0.93 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402GD5KM	Not Available	503	Open in IMG/M
3300003218\|JGI26339J46600_10099115	Not Available	716	Open in IMG/M
3300003219\|JGI26341J46601_10163318	Not Available	617	Open in IMG/M
3300004082\|Ga0062384_100692122	Not Available	701	Open in IMG/M
3300004478\|Ga0068972_1412451	Not Available	546	Open in IMG/M
3300005341\|Ga0070691_10495217	Not Available	705	Open in IMG/M
3300005366\|Ga0070659_100750206	Not Available	846	Open in IMG/M
3300005435\|Ga0070714_100324961	Not Available	1439	Open in IMG/M
3300005439\|Ga0070711_100214601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1492	Open in IMG/M
3300005445\|Ga0070708_100195317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1893	Open in IMG/M
3300005458\|Ga0070681_11753295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300005466\|Ga0070685_10581121	Not Available	804	Open in IMG/M
3300005530\|Ga0070679_100317822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1506	Open in IMG/M
3300005615\|Ga0070702_100193424	Not Available	1340	Open in IMG/M
3300006059\|Ga0075017_100525267	Not Available	899	Open in IMG/M
3300006577\|Ga0074050_11854602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300006580\|Ga0074049_12338708	Not Available	734	Open in IMG/M
3300006605\|Ga0074057_12174047	Not Available	816	Open in IMG/M
3300006800\|Ga0066660_11517730	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006804\|Ga0079221_10194460	Not Available	1105	Open in IMG/M
3300006904\|Ga0075424_102412671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300009038\|Ga0099829_10203506	Not Available	1603	Open in IMG/M
3300009093\|Ga0105240_12311811	Not Available	557	Open in IMG/M
3300009162\|Ga0075423_10201196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2089	Open in IMG/M
3300009523\|Ga0116221_1225738	Not Available	810	Open in IMG/M
3300009698\|Ga0116216_10104471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1743	Open in IMG/M
3300009700\|Ga0116217_10536802	Not Available	732	Open in IMG/M
3300009700\|Ga0116217_10894336	Not Available	545	Open in IMG/M
3300010159\|Ga0099796_10569495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium mageritense	510	Open in IMG/M
3300010303\|Ga0134082_10294768	Not Available	679	Open in IMG/M
3300010322\|Ga0134084_10181260	Not Available	726	Open in IMG/M
3300010335\|Ga0134063_10210122	Not Available	918	Open in IMG/M
3300010375\|Ga0105239_13121636	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_103894214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300010396\|Ga0134126_12826846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300011077\|Ga0138572_1130663	Not Available	520	Open in IMG/M
3300011106\|Ga0151489_1178989	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012205\|Ga0137362_11353305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300012351\|Ga0137386_10380674	Not Available	1016	Open in IMG/M
3300012488\|Ga0157343_1009859	Not Available	713	Open in IMG/M
3300012500\|Ga0157314_1061960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300012960\|Ga0164301_10583309	Not Available	822	Open in IMG/M
3300012961\|Ga0164302_11643486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300012984\|Ga0164309_10701158	Not Available	803	Open in IMG/M
3300013105\|Ga0157369_10700712	Not Available	1043	Open in IMG/M
3300013297\|Ga0157378_10495729	Not Available	1219	Open in IMG/M
3300016319\|Ga0182033_11976929	Not Available	531	Open in IMG/M
3300016341\|Ga0182035_11761963	Not Available	560	Open in IMG/M
3300016371\|Ga0182034_10213216	Not Available	1501	Open in IMG/M
3300016371\|Ga0182034_11783244	Not Available	542	Open in IMG/M
3300016422\|Ga0182039_10739586	Not Available	869	Open in IMG/M
3300017926\|Ga0187807_1218153	Not Available	620	Open in IMG/M
3300017928\|Ga0187806_1344484	Not Available	533	Open in IMG/M
3300017932\|Ga0187814_10455104	Not Available	502	Open in IMG/M
3300017937\|Ga0187809_10099138	Not Available	976	Open in IMG/M
3300017942\|Ga0187808_10061932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1597	Open in IMG/M
3300017943\|Ga0187819_10436248	Not Available	750	Open in IMG/M
3300017955\|Ga0187817_10883107	Not Available	572	Open in IMG/M
3300017955\|Ga0187817_11056577	Not Available	521	Open in IMG/M
3300017959\|Ga0187779_10100377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1743	Open in IMG/M
3300017970\|Ga0187783_10900265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M
3300018085\|Ga0187772_10955865	Not Available	624	Open in IMG/M
3300020582\|Ga0210395_10824161	Not Available	691	Open in IMG/M
3300021377\|Ga0213874_10453933	Not Available	506	Open in IMG/M
3300021432\|Ga0210384_11763640	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300024227\|Ga0228598_1100742	Not Available	583	Open in IMG/M
3300024279\|Ga0247692_1079791	Not Available	515	Open in IMG/M
3300025900\|Ga0207710_10151100	Not Available	1127	Open in IMG/M
3300025903\|Ga0207680_10110170	Not Available	1784	Open in IMG/M
3300025906\|Ga0207699_10480509	Not Available	895	Open in IMG/M
3300025909\|Ga0207705_10067318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2592	Open in IMG/M
3300025910\|Ga0207684_11171869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300025916\|Ga0207663_11023859	Not Available	663	Open in IMG/M
3300025917\|Ga0207660_10279227	Not Available	1325	Open in IMG/M
3300025927\|Ga0207687_11640589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300026317\|Ga0209154_1023624	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300027725\|Ga0209178_1222040	Not Available	675	Open in IMG/M
3300027812\|Ga0209656_10032917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3055	Open in IMG/M
3300027854\|Ga0209517_10070434	Not Available	2485	Open in IMG/M
3300027910\|Ga0209583_10449371	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300028138\|Ga0247684_1027321	Not Available	907	Open in IMG/M
3300028885\|Ga0307304_10589419	Not Available	514	Open in IMG/M
3300028906\|Ga0308309_10182287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1717	Open in IMG/M
3300030494\|Ga0310037_10055209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1885	Open in IMG/M
3300031640\|Ga0318555_10353066	Not Available	796	Open in IMG/M
3300031708\|Ga0310686_106769285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300031747\|Ga0318502_11022578	Not Available	504	Open in IMG/M
3300031768\|Ga0318509_10399325	Not Available	769	Open in IMG/M
3300031770\|Ga0318521_10454476	Not Available	767	Open in IMG/M
3300031770\|Ga0318521_10463806	Not Available	759	Open in IMG/M
3300031796\|Ga0318576_10633765	Not Available	503	Open in IMG/M
3300031797\|Ga0318550_10525163	Not Available	570	Open in IMG/M
3300031799\|Ga0318565_10108833	Not Available	1332	Open in IMG/M
3300031821\|Ga0318567_10490492	Not Available	697	Open in IMG/M
3300031846\|Ga0318512_10651323	Not Available	539	Open in IMG/M
3300031859\|Ga0318527_10091546	Not Available	1240	Open in IMG/M
3300031879\|Ga0306919_10507779	Not Available	929	Open in IMG/M
3300031896\|Ga0318551_10579431	Not Available	647	Open in IMG/M
3300032008\|Ga0318562_10086882	Not Available	1761	Open in IMG/M
3300032008\|Ga0318562_10371354	Not Available	832	Open in IMG/M
3300032065\|Ga0318513_10281180	Not Available	807	Open in IMG/M
3300032174\|Ga0307470_10083693	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300032205\|Ga0307472_102592408	Not Available	517	Open in IMG/M
3300032261\|Ga0306920_100794546	Not Available	1389	Open in IMG/M
3300032896\|Ga0335075_11690728	Not Available	515	Open in IMG/M
3300032897\|Ga0335071_11158477	Not Available	718	Open in IMG/M
3300032955\|Ga0335076_10080477	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.90%
Plants	Host-Associated → Plants	14.02%
Aquatic	Environmental → Aquatic	13.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.90%
Freshwater	Environmental → Aquatic → Freshwater	11.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.14%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08478580	2189573004	Grass Soil	MADWWPFDRSWTDEWRRSIAGVLSASSAAAASLGLPQPGTLPGDPFGLLVDTARTWLIGKKRTFRFPEGDLTMVLTDISV
JGI26339J46600_100991152	3300003218	Bog Forest Soil	MAEWWPFDRSRTDEWKRTWTDIVSMSSAAAASIGLPQPSTLPGDPFAVLVDAARSWLTGKQRTFRFSGRDLTLTLS
JGI26341J46601_101633181	3300003219	Bog Forest Soil	MAEWWPFDRSRTDEWKRTWTDIISRSSAAAASLGLPQPGTLVGDPFAALVDAARAWLTGKKRTFRFSGHDLTLTLSDISMEGADL
Ga0062384_1006921222	3300004082	Bog Forest Soil	MTEWWPFDRSRTDEWKRSWSDIVAMSSAAAASVGLPQRGTLPGDPVAALVEAARVRLIGKKRTFPFSGHDMTLTLSDISVGGADLARV
Ga0068972_14124512	3300004478	Peatlands Soil	MAEWWPFDRSWTDEWKRTWTEIISMSSAAAASIGLPPPGTLPGDPFAVLVDAARAWLTGKQRTFRFSGHDLTLTLSDISVDGAD
Ga0070691_104952171	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEG
Ga0070659_1007502061	3300005366	Corn Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTF
Ga0070714_1003249612	3300005435	Agricultural Soil	MGVMADWWPFDRFRADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTG
Ga0070711_1002146013	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGVMADWWPFDRFRADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKK
Ga0070708_1001953171	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTFRF
Ga0070681_117532952	3300005458	Corn Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFR
Ga0070685_105811212	3300005466	Switchgrass Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLVLEDISL
Ga0070679_1003178223	3300005530	Corn Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPE
Ga0070702_1001934242	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLT
Ga0075017_1005252672	3300006059	Watersheds	MAEWWRFDRSRTDEWKRTWTEIVSMSSAAAASIGLPQPSTLPGDPFAVLVDAARAWLTGKKRTFRFSGHDLTLT
Ga0074050_118546021	3300006577	Soil	MADWWPFDRSWTDEWRRSIAGVLSASSAAAASLGLPQPGTLPGDPFGLLVDTARTWLTGKKRTFRFPEGDLTMVL
Ga0074049_123387081	3300006580	Soil	MADWWPFDRSWTDEWRRSIAGVLSASSAAAASLGLPQPGTLPGDPFGLLVDTARTWLTG
Ga0074057_121740472	3300006605	Soil	MADWWPFDRSWADEWRRSIAGVLSASSAAAASLGLPQPGTLPGDPFGLLVDTARTWLTGKKRTFRFPEGDLT
Ga0066660_115177301	3300006800	Soil	MAEWWPFDRSWADEWRRNWTEVLNLSSAAAQSLGLPQPGTLPGDPFVAIVDAARGWLIEKKRTFRFFGQDLTLILSDIS
Ga0079221_101944602	3300006804	Agricultural Soil	MADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRT
Ga0075424_1024126712	3300006904	Populus Rhizosphere	MADWWPFDRFRADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLEDISLEGSD
Ga0099829_102035061	3300009038	Vadose Zone Soil	MAEWWPFDRSWADDWKRTWTEIISRSSAAAASIGLPQPGTLPGDPFAVLVDAARAWLTGKKRTFRFSGHDLTL
Ga0105240_123118112	3300009093	Corn Rhizosphere	MADWWPFDRSWTDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLEDISL
Ga0075423_102011963	3300009162	Populus Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKR
Ga0116221_12257381	3300009523	Peatlands Soil	MAEWWPFDRSWTDEWKRTWTEIISMSSAAAASIGLPPPGTLPGDPFAMVVDAARAWLTGKKRTFRVAGHDLTLTLSDIS
Ga0116216_101044712	3300009698	Peatlands Soil	MAEWRPFDRSRTDEWKRTWTEIISRSSAAAAAIGLPQPGTLAGDPFAALVDAARAWFTWKKRTFRLSGHHLTLTLSDISIDGADLAYFRR*
Ga0116217_105368022	3300009700	Peatlands Soil	MAEWWRFDRSRTDEWKRTWTEIVSLSSAAAASIGLPQPSTLPGDPFAVLVDAARAWLTGKKRTFRFSGHDLTLT
Ga0116217_108943361	3300009700	Peatlands Soil	MAEWRPFDRSRTDEWKRTWTEIISRSSAAAAAIGLPQPGTLAGDPFAALVDAARAWFTWKKRTFRLSGHHLTLTL
Ga0099796_105694952	3300010159	Vadose Zone Soil	MADWWPFDRSWIDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGMLVDAARTWLTGKKRTFRFADGDV
Ga0134082_102947682	3300010303	Grasslands Soil	MVADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTLRFP
Ga0134084_101812601	3300010322	Grasslands Soil	MADWWPFDRSWVDEWRRSVTGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTLRFPEGDLTMVLTDISV
Ga0134063_102101222	3300010335	Grasslands Soil	MVADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTLRF
Ga0105239_131216361	3300010375	Corn Rhizosphere	MADWWPFDRSWTDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGD
Ga0126381_1038942142	3300010376	Tropical Forest Soil	MADWWPFDRSWVDEWRRSVAGVLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVL
Ga0134126_128268461	3300010396	Terrestrial Soil	MADWWPFDRSWGDDWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPE
Ga0138572_11306632	3300011077	Peatlands Soil	MAEWWRFDRSRTDEWKRTWTEIIAMSSAAAASIGLPQPGTLPGDPFAMVVDAARAWLTGKKRTFRFAGHDLTLTLSDISVDG
Ga0151489_11789892	3300011106	Soil	MADWWPFDRSWTDEWRRSIAGVLSASSAAAASLGLPQPGTLPGDPFGLLVETARTWLIGKKRTFRFPEGDLTMVL
Ga0137362_113533052	3300012205	Vadose Zone Soil	MADWWPFDRSWIDEWRRSVAGMLSASSAAAASLGLPQPATLPGDPFGLLVDAARTWLTGKKRTLRFPEGDLTMVLTDISLQG
Ga0137386_103806742	3300012351	Vadose Zone Soil	MADWWPFDRSWADEWRRSIAGMLSASSAAAASLGMRQPGTLPGDPFGLLVDTARTWLIGKKRTFRFPEGDLTMVLTDISVQGSDV
Ga0157343_10098592	3300012488	Arabidopsis Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGRKRTFRFPEGDLTLVLEDISLEGS
Ga0157314_10619601	3300012500	Arabidopsis Rhizosphere	MADWWPFDRSWADEWRRSIAGMLSASSSAAALLGLPQPGTLPGDPFGLLVDTARTWLTGKKRT
Ga0164301_105833092	3300012960	Soil	MADWWPFDRSWVDEWRRRGVAGMLSASSAAAASLGLAQSGTLPGDPFGLLVDAARTWLTGKKRTLRFPEGDLTMV
Ga0164302_116434861	3300012961	Soil	MADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPCGLLVDAARTWLTGKKRTLR
Ga0164309_107011582	3300012984	Soil	MADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTLRFPEGDLTMVLTDISVQGSD
Ga0157369_107007122	3300013105	Corn Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLV
Ga0157378_104957292	3300013297	Miscanthus Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFP
Ga0182033_119769291	3300016319	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGK
Ga0182035_117619632	3300016341	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDL
Ga0182034_102132162	3300016371	Soil	MAEWWPFDRSRTDEWKRNLSELLAMSSAAAASLGLPQRGTLPGDPFALIVDAARARLVGRTQTFRFSGHDLTMTLSDISVDGADLAKVVG
Ga0182034_117832442	3300016371	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDL
Ga0182039_107395862	3300016422	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLT
Ga0187807_12181531	3300017926	Freshwater Sediment	MAEWWPFDRSRTEEWKRNLSDFLAMSAAAAASLGLPQPGTLTGDPFVLVVDAARARLVGKTQTFRFAGRDLTMTLSD
Ga0187806_13444841	3300017928	Freshwater Sediment	MAEWWRFDRSWTDEWKRTWTEIVSMSSAAAASIGLPQPSTLPGDPFAVLVDAARAWLTGKKRTFRFSGHDLTLTLSDIS
Ga0187814_104551041	3300017932	Freshwater Sediment	MAEWWPFDRSRTDECKRNLSEFLAMSSAAAASIGLPQPGTLPGDPFALVVDAARARLVGKTQAFRFSGRDLT
Ga0187809_100991382	3300017937	Freshwater Sediment	MPDWWPFDRSWADEWRRSVAGMLSASSSAAASLGLPAPRTLPGDPFGMLVDAARTWLTGKKR
Ga0187808_100619323	3300017942	Freshwater Sediment	MAEWWPFDRSRAEEWKRNLTELLAMSSAAAASLGLPQPGTLTGDPFVLVVDAARARLVGKTQTFRFPGRDLAMTLSDSSVDGADLAKVVG
Ga0187819_104362482	3300017943	Freshwater Sediment	MAEWWPFDRSRTEEWKRNLNEFLAMSSAAAASLGLPQPGTLPGDPFALVVDAARARLVGRTQTFRFSGRDLTMTLSDISVDG
Ga0187817_108831072	3300017955	Freshwater Sediment	MAEWWRLDRSWTDEWKRTWTEIVSMSSAAAASIGLPQPSTLPGDPFAGLVDAARAWLTGKKRTFRFSGHDLTLTLSD
Ga0187817_110565772	3300017955	Freshwater Sediment	MAEWWPFDRSRAEEWKRNLTELLAMSSAAAASLGLPQPGTLTGDPFVLVVDAARARLVGKKQTFRFAGRDMTMTLSDISVDGADLAKVVGQYG
Ga0187779_101003773	3300017959	Tropical Peatland	MAEWWPFDRSRTDEWKRNLADFLAMSSAAAASLGLPQRGTLPGDPFALIVDAARARLVGRTQTFRFSGRDLTMTLSDISVDGA
Ga0187783_109002651	3300017970	Tropical Peatland	MADWLPFDRSRVDEWRRSLAGLLSASSAAAASLGLPQPSTLPGDPFGLLVDAAGTWLIGKKRTFRFPEGDLTMVL
Ga0187772_109558651	3300018085	Tropical Peatland	MADWLPLYRSWAEEWRRTWAGVVSTSSAAAASLGMPPPGTLPGDPFTIMVAAARSWLVGKKRTFRFPGHELTLLLTDISLQS
Ga0210395_108241612	3300020582	Soil	MADWWPFDRSWVDEWRRSVTGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTIRFPEGDLTMVLTD
Ga0213874_104539331	3300021377	Plant Roots	MPDWWRFDRSWAEEWKRGFAGLISVSSSAAASLGLPQPGTLPGDPFGLLVDAATTWLVGK
Ga0210384_117636402	3300021432	Soil	MADWWPFDRSWVDEWRRSVTGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTIRFPEGDLTMV
Ga0228598_11007422	3300024227	Rhizosphere	MAERRPFDRSWTDDWKRTWTDIVSMSSAAAASIGLPQPSTLPGDPFALLVDAARSWLTGKQRTFRFAGHDLTLTLSDISMDGADLARVMGQY
Ga0247692_10797912	3300024279	Soil	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLVLEDISLE
Ga0207710_101511001	3300025900	Switchgrass Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLVLE
Ga0207680_101101701	3300025903	Switchgrass Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLVL
Ga0207699_104805091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRFRADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFSEGDLTLVL
Ga0207705_100673181	3300025909	Corn Rhizosphere	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKR
Ga0207684_111718691	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTFRFPEGDLTMVLTD
Ga0207663_110238591	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MADWWPFDRFRADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFP
Ga0207660_102792272	3300025917	Corn Rhizosphere	MADWWPFDRSWGDDWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTLVL
Ga0207687_116405892	3300025927	Miscanthus Rhizosphere	MADWWPFDRSWGDDWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDLTL
Ga0209154_10236241	3300026317	Soil	MADWWPFDRSWVDEWRRSVTGMLSASSAAAASLGLPQPGTLPGDPFGLLVDAARTWLTGKKRTLR
Ga0209178_12220401	3300027725	Agricultural Soil	MADWWPFDRSWGDDWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEG
Ga0209656_100329171	3300027812	Bog Forest Soil	MAEWWPFDRSRTDEWKRAWTEIISMSSAAAASIGLPQPGTLPGDPFVVLVDAARTWLTGKRRTFRFWGHD
Ga0209517_100704344	3300027854	Peatlands Soil	MAEWWPFDRSWTDEWKRTWTEIISMSSAAAASIGLPPPGTLPGDPFAMVVDAARAWLTGKKRTFRVAGHDLTLTL
Ga0209583_104493712	3300027910	Watersheds	MAEWWPFDRSWTDDWKRTWTDIVSMSSAAAASIGLPQPSTLPGDPFALLLDAARSWLTGKQRTFRFSGHDLTLTLSDISVAGADLARVVGQYG
Ga0247684_10273212	3300028138	Soil	MADWWPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEG
Ga0307304_105894192	3300028885	Soil	MADWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLEDI
Ga0308309_101822873	3300028906	Soil	MAEWWPFDRSWTDEWKRTWTDIVSMSSAAAASIGLPQPSTLPGDPFAVLVDAARGWLTGKKRTFRFSGHDLTLTLSDISMDGADLAR
Ga0310037_100552092	3300030494	Peatlands Soil	MAEWRPFDRSRTDEWKRTWTEIISRSSAAAAAIGLPQPGTLAGDPFAALVDAARAWFTWKKRTFRLSGHHLTLTLSDISIDGADLAYFRR
Ga0318555_103530661	3300031640	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGTKRTFRFPE
Ga0310686_1067692851	3300031708	Soil	MADWWPFDRSWAEEWKRNWTEVLSLSSAAAASLGLPQPAALAGDAFTALVDAARTRLVGKQRT
Ga0318502_110225781	3300031747	Soil	MAEWWPFDRSRTEEWKRNLTEFLAMSSAAAASLGLPQPGTLSGDPFVLVVDAARARLVGKTQTFRFSGRDMTMTLSDISVDGADLAKVVGQYG
Ga0318509_103993251	3300031768	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTMVLVD
Ga0318521_104544761	3300031770	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLEDIALEGSD
Ga0318521_104638061	3300031770	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFP
Ga0318576_106337652	3300031796	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLED
Ga0318550_105251632	3300031797	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLE
Ga0318565_101088331	3300031799	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTMVLED
Ga0318567_104904922	3300031821	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLV
Ga0318512_106513232	3300031846	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTMVLVDISMEGSD
Ga0318527_100915462	3300031859	Soil	MADWWPFDRSWADEWKRNFTGVVNLSSAAAQSLGLPQPGFLPGDPFAAVVDAARAWLVGKPRVFRIAGREL
Ga0306919_105077791	3300031879	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFR
Ga0318551_105794311	3300031896	Soil	MADWLPFDRSRVDEWRRSLAGLLSASSAAAASLGLPQPSTLPGDPFGLLVDAAGTWLIGKKRTFRFPE
Ga0318562_100868823	3300032008	Soil	MAEWWPFDRSRTDEWKRNLTDFLAMSSAAAASIGLPQPGTLPGDPFGLLVDAARARLVGRTQTFRFSGRDLT
Ga0318562_103713542	3300032008	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTM
Ga0318513_102811802	3300032065	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTMVLE
Ga0307470_100836931	3300032174	Hardwood Forest Soil	MADWGPFDRSWGDEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFRMLVDAARTWLTGKKRTFRFPEGDL
Ga0307472_1025924081	3300032205	Hardwood Forest Soil	MADWWPFDRSWADEWRRSVAGMLSASSSAAASLGLPAPRTLPGDPFGMLVDAARTWLTGK
Ga0306920_1007945461	3300032261	Soil	MPDWWPFDRSWVDEWRRSVAGMLSASSAAAASLGLPQPTTLPGDPFGMLVDAARTWLTGKKRTFR
Ga0335075_116907282	3300032896	Soil	MTERWPFDRSRAEGWKRSWTDLLAMSSAAAASIGLPQPGTLPGDPFTAMVNAARTWLVGKRRTLRFSGRDMTLT
Ga0335071_111584771	3300032897	Soil	MADWWPFDRSWADEWRRSVAGMLSASSSAAASLGLPAPRTLPGDPFGMLVDAARTWLTGKKRTFRFPEGDLTLVLEDISVEG
Ga0335076_100804775	3300032955	Soil	MPDWWPFDRSWADEWRRSVAGMLSASSAAAASLGLPQPRTLPGDPFGMLVDAARTWLAGKKRTFRFPEGDLTLVLE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092002

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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