Metagenome / Metatranscriptome Family F092000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	94 residues
Representative Sequence	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFTAVQW
Number of Associated Samples	67
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.70 %
% of genes near scaffold ends (potentially truncated)	53.27 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.570 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.056 % of family members)
Environment Ontology (ENVO)	Unclassified (63.551 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.617 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.12% β-sheet: 23.44% Coil/Unstructured: 73.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.121.5.0: automated matches	d7kp3a_	7kp3	0.66403
b.121.4.7: Tombusviridae-like VP	d1f2na_	1f2n	0.64586
b.121.4.7: Tombusviridae-like VP	d1ng0a_	1ng0	0.63977
b.121.5.3: Densovirinae-like VP	d1dnva_	1dnv	0.63962
b.121.4.6: Tymoviridae-like VP	d1auya_	1auy	0.63371

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01520	Amidase_3	2.80
PF04865	Baseplate_J	0.93
PF07484	Collar	0.93
PF13392	HNH_3	0.93
PF00271	Helicase_C	0.93
PF01370	Epimerase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	2.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
All Organisms	root	All Organisms	22.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
cellular organisms	root	All Organisms → cellular organisms	18.69 %
Viruses	superkingdom	All Organisms → Viruses	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.87 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	2.80 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	2.80 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Aeromonas sobria	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas sobria	2.80 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Aeromonas sobria	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas sobria	2.80 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1003311	All Organisms → Viruses → Predicted Viral	2273	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1008968	Not Available	1412	Open in IMG/M
3300005332\|Ga0066388_101997983	Not Available	1039	Open in IMG/M
3300005713\|Ga0066905_101374796	Not Available	638	Open in IMG/M
3300005713\|Ga0066905_101763179	Not Available	570	Open in IMG/M
3300005764\|Ga0066903_100018226	All Organisms → cellular organisms → Bacteria	7311	Open in IMG/M
3300005764\|Ga0066903_100129324	Not Available	3545	Open in IMG/M
3300005764\|Ga0066903_100386928	Not Available	2291	Open in IMG/M
3300005764\|Ga0066903_100433755	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300005764\|Ga0066903_102374792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas sobria	1025	Open in IMG/M
3300005764\|Ga0066903_107612088	Not Available	558	Open in IMG/M
3300006086\|Ga0075019_10930594	Not Available	559	Open in IMG/M
3300006578\|Ga0074059_10455413	Not Available	611	Open in IMG/M
3300010048\|Ga0126373_10044659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3914	Open in IMG/M
3300010358\|Ga0126370_10000004	All Organisms → cellular organisms → Bacteria	73050	Open in IMG/M
3300010358\|Ga0126370_10081559	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	2177	Open in IMG/M
3300010358\|Ga0126370_10404186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1123	Open in IMG/M
3300010361\|Ga0126378_10917345	Not Available	982	Open in IMG/M
3300010362\|Ga0126377_12371144	Not Available	607	Open in IMG/M
3300010376\|Ga0126381_100001056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29826	Open in IMG/M
3300010376\|Ga0126381_100001793	All Organisms → cellular organisms → Bacteria → Proteobacteria	23006	Open in IMG/M
3300010376\|Ga0126381_100102714	All Organisms → cellular organisms → Bacteria	3654	Open in IMG/M
3300010398\|Ga0126383_12210514	Not Available	636	Open in IMG/M
3300010398\|Ga0126383_13611140	Not Available	505	Open in IMG/M
3300012948\|Ga0126375_10089256	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300012971\|Ga0126369_11557785	Not Available	750	Open in IMG/M
3300013104\|Ga0157370_11731453	Not Available	561	Open in IMG/M
3300016270\|Ga0182036_10228072	Not Available	1382	Open in IMG/M
3300016270\|Ga0182036_11334151	Not Available	599	Open in IMG/M
3300016294\|Ga0182041_10985419	Not Available	761	Open in IMG/M
3300016319\|Ga0182033_10424014	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300016341\|Ga0182035_10160825	Not Available	1737	Open in IMG/M
3300016357\|Ga0182032_11020507	Not Available	707	Open in IMG/M
3300016371\|Ga0182034_11310052	Not Available	632	Open in IMG/M
3300016371\|Ga0182034_11372316	Not Available	617	Open in IMG/M
3300016387\|Ga0182040_11371355	Not Available	598	Open in IMG/M
3300021168\|Ga0210406_10218431	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300021401\|Ga0210393_10867155	Not Available	733	Open in IMG/M
3300021403\|Ga0210397_10389322	Not Available	1040	Open in IMG/M
3300021405\|Ga0210387_11366887	Not Available	610	Open in IMG/M
3300021475\|Ga0210392_10002631	All Organisms → cellular organisms → Bacteria → Proteobacteria	9218	Open in IMG/M
3300021475\|Ga0210392_10030253	Not Available	3176	Open in IMG/M
3300021475\|Ga0210392_10054773	Not Available	2472	Open in IMG/M
3300021475\|Ga0210392_10681958	Not Available	764	Open in IMG/M
3300021560\|Ga0126371_10000662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28779	Open in IMG/M
3300021560\|Ga0126371_10535190	Not Available	1320	Open in IMG/M
3300021560\|Ga0126371_10778344	Not Available	1103	Open in IMG/M
3300027898\|Ga0209067_10922212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	514	Open in IMG/M
3300031543\|Ga0318516_10128046	Not Available	1451	Open in IMG/M
3300031546\|Ga0318538_10555088	Not Available	623	Open in IMG/M
3300031573\|Ga0310915_10469572	Not Available	894	Open in IMG/M
3300031668\|Ga0318542_10187552	Not Available	1040	Open in IMG/M
3300031681\|Ga0318572_10591149	Not Available	661	Open in IMG/M
3300031681\|Ga0318572_10827231	Not Available	550	Open in IMG/M
3300031719\|Ga0306917_10305759	Not Available	1229	Open in IMG/M
3300031719\|Ga0306917_11219398	Not Available	584	Open in IMG/M
3300031744\|Ga0306918_11574863	Not Available	501	Open in IMG/M
3300031748\|Ga0318492_10116471	Not Available	1325	Open in IMG/M
3300031748\|Ga0318492_10549237	Not Available	615	Open in IMG/M
3300031763\|Ga0318537_10079274	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300031768\|Ga0318509_10726156	Not Available	551	Open in IMG/M
3300031771\|Ga0318546_10269120	Not Available	1175	Open in IMG/M
3300031780\|Ga0318508_1153921	Not Available	653	Open in IMG/M
3300031781\|Ga0318547_10970725	Not Available	531	Open in IMG/M
3300031797\|Ga0318550_10295502	Not Available	786	Open in IMG/M
3300031805\|Ga0318497_10722789	Not Available	558	Open in IMG/M
3300031805\|Ga0318497_10835058	Not Available	517	Open in IMG/M
3300031831\|Ga0318564_10194502	Not Available	903	Open in IMG/M
3300031833\|Ga0310917_10037723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2902	Open in IMG/M
3300031833\|Ga0310917_11007979	Not Available	558	Open in IMG/M
3300031890\|Ga0306925_10342821	All Organisms → Viruses → Predicted Viral	1605	Open in IMG/M
3300031890\|Ga0306925_10994117	Not Available	856	Open in IMG/M
3300031896\|Ga0318551_10446165	Not Available	739	Open in IMG/M
3300031897\|Ga0318520_10058349	Not Available	2055	Open in IMG/M
3300031897\|Ga0318520_10691412	Not Available	637	Open in IMG/M
3300031912\|Ga0306921_10211564	Not Available	2272	Open in IMG/M
3300031912\|Ga0306921_11535838	Not Available	726	Open in IMG/M
3300031912\|Ga0306921_11626792	Not Available	701	Open in IMG/M
3300031912\|Ga0306921_11942651	Not Available	628	Open in IMG/M
3300031912\|Ga0306921_12252219	Not Available	573	Open in IMG/M
3300031912\|Ga0306921_12448474	Not Available	543	Open in IMG/M
3300031941\|Ga0310912_10523169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas sobria	924	Open in IMG/M
3300031941\|Ga0310912_10901292	Not Available	681	Open in IMG/M
3300031942\|Ga0310916_10048970	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300031954\|Ga0306926_10484786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas sobria	1521	Open in IMG/M
3300032001\|Ga0306922_10231121	Not Available	1987	Open in IMG/M
3300032001\|Ga0306922_11002406	Not Available	862	Open in IMG/M
3300032001\|Ga0306922_11047126	Not Available	839	Open in IMG/M
3300032009\|Ga0318563_10087728	Not Available	1633	Open in IMG/M
3300032041\|Ga0318549_10430355	Not Available	594	Open in IMG/M
3300032041\|Ga0318549_10437068	Not Available	589	Open in IMG/M
3300032044\|Ga0318558_10213903	Not Available	943	Open in IMG/M
3300032059\|Ga0318533_11229046	Not Available	548	Open in IMG/M
3300032060\|Ga0318505_10505085	Not Available	570	Open in IMG/M
3300032063\|Ga0318504_10536625	Not Available	561	Open in IMG/M
3300032064\|Ga0318510_10101728	Not Available	1094	Open in IMG/M
3300032065\|Ga0318513_10299750	Not Available	781	Open in IMG/M
3300032067\|Ga0318524_10525817	Not Available	621	Open in IMG/M
3300032076\|Ga0306924_11306104	Not Available	779	Open in IMG/M
3300032076\|Ga0306924_12635848	Not Available	501	Open in IMG/M
3300032090\|Ga0318518_10634054	Not Available	544	Open in IMG/M
3300032094\|Ga0318540_10601122	Not Available	530	Open in IMG/M
3300032261\|Ga0306920_100382227	Not Available	2094	Open in IMG/M
3300032261\|Ga0306920_101587860	Not Available	931	Open in IMG/M
3300032261\|Ga0306920_101874288	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	844	Open in IMG/M
3300032261\|Ga0306920_102972432	Not Available	641	Open in IMG/M
3300032261\|Ga0306920_103737958	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.20%
Aquatic	Environmental → Aquatic	1.87%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.78%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10033111	3300000837	Forest Soil	VISPNQAGGYIVNPFNSVDQGLGTAEPLYVDQVYNAQLQANGTTIALQPGQSYSIIPNTSTPVTVASASANHKFTAVMWV*
AP72_2010_repI_A100DRAFT_10089682	3300000837	Forest Soil	MSTPIAGLVSQTPSSSGIPVNAIASNQSGGYVVNPLLAADQGLVTAEVLYVNQVGPSDVQANGTTIALQPGQSY
Ga0066388_1019979831	3300005332	Tropical Forest Soil	MSTPVVGPNTTTSATPGTAVIGISSNQAGGYIVNPALAADQGLATAESLYVNQVTNATLQANGTTIELLPGQSYSVIPSTTTPVTVSAPSASHNFT
Ga0066905_1013747962	3300005713	Tropical Forest Soil	MSAPVAGPNLQTSATPGTAVIGVAANQAGGYIVNPTAVADQGLTGDAQVLFVNQVTNATTQANGTTIALQPGQSYSVIPFTTTPVTVSSGSA
Ga0066905_1017631792	3300005713	Tropical Forest Soil	MSTPVAGMASQTSATAGVPVNAIGPNQAGGYIVNPLTAVDQGLPNAEVLYVSQVGPADTSANNVTIALQPGQSYTVIPQTTTPVSVASNSASHKFTAVQWT*
Ga0066903_1000182263	3300005764	Tropical Forest Soil	MTAPTVGSATQTSSTPGIPVNAIAPNQSGGYIVNPLLAADQGLGTAEVLYVNQVGPSAVAANGTTIALQPGQSYTVIPFTTTPVSVASNSPNHKFTAVQWP*
Ga0066903_1001293242	3300005764	Tropical Forest Soil	MATPAVGLATQTGSTPGIPTNAIGPNMSGGYIVNPLTAADQGLASAEVLYVNQVGAADTQANGTTIALQPGQSYTVIPNTTSPVSVASASANHEFTAVQWP*
Ga0066903_1003869283	3300005764	Tropical Forest Soil	MSTPLAGSASQTGAAGVPVTAIAPNQSGGYIVNPLAAVDQGLATAEVLYVSQVGPADTQANNVTIALQPGQSYTVIPATTTPVTVAALSPNHKFTAVQWA*
Ga0066903_1004337552	3300005764	Tropical Forest Soil	MSTPVAGLASQTSATAGVPTNAIAANQSGGYIVNPLLAADQGLGSAEVLYVNQVGPSATAANGTTIALQPGQSYTVIPNTTTPVSVASLSANHKFTAVQWP*
Ga0066903_1023747922	3300005764	Tropical Forest Soil	MSTPVAGLASQTSSSPGVPVNAIAANQSGGYIVNPLAASDQGLATAEVLYVNQVMPATVVGNGTTIVLQPGQSYTVIPGTTTPVSVASSTANHKFTAVQWA*
Ga0066903_1076120882	3300005764	Tropical Forest Soil	MATPVAGLAAQTGASPGVPINAIGPNQAGGYIVNPLSATDQGLPNAEVLFVSQVGPADTSANNVTVALQPGQSYTVIPNTTTPVSVASGSANHKFTAVQWPAP*
Ga0075019_109305942	3300006086	Watersheds	MSTPIQGPATVTPATAGEPVLAISPNQAGGYIVNPLDETDQGLAAAEPLYVNQVTDAALQANDTTLALQPGQSYAVIPGTTTGVSVASQSPNHKFTAVQWA*
Ga0074059_104554132	3300006578	Soil	MASPVAGSNTQTPSTPGTAITAIPANQAGGYIVNPLSATDQGLPNNEVLFVNQVTTAKLNANGTTIALQPGQSYTVIPFTLTPVSVASNSASHKFTAVCWPTA*
Ga0126373_100446598	3300010048	Tropical Forest Soil	TTVVAIDQNMSGGYIVNPLSAADQGLTTAEVLFVNQVTLAATVANGTTIALQPGQSYTVIPNTTTPVTVASLSPNHKFTAVEWP*
Ga0126370_1000000491	3300010358	Tropical Forest Soil	MATPAVGLATQTGSTPGIPTNAIGPNMSGGYIVNPLTAADQGLASAEVLYVNQVGAADTQANGTTIALQPGQSYTVIPNTTSPVSVASASANHKFTAVQWP*
Ga0126370_100815593	3300010358	Tropical Forest Soil	MSTPVAGLISQTSATAGLPANAIAANQSGGYIVNPLLAADQGLAAAEVLFVNQVTVSDVQANGTTIALQPGQSYTVIPFTTTPVSVAALSASHKFTAVQWP*
Ga0126370_104041861	3300010358	Tropical Forest Soil	TQTSSTPGIPVNAIAPNQSGGYIVNPLLAADQGLGTAEVLYVNQVGPSAVAANGTTIALQPGQSYTVIPFTTTPVSVASNSPNHKFTAVQWP*
Ga0126378_109173452	3300010361	Tropical Forest Soil	MSTPVAGLANQTSSTPGVPINAIGPNQSGGYIVNPLAAVDQGLPNAEVLYVSQVGAADTSANNVTVALQPGQSYTVIPNTTTPVSVASGSANHKFTAVQWS*
Ga0126377_123711442	3300010362	Tropical Forest Soil	MSTPVAGMASQTSATAGVPVNAIGPNQAGGYIVNPLTAVDQGLPNAEVLYVSQVGPADTSANNVTIALQPGQSYTVIPQ
Ga0126381_10000105647	3300010376	Tropical Forest Soil	MATPAVGLATQTGSTPGLPTNAIGPNMSGGYVVNPLTAADQGLASAEVLYVNQVGAADTQANGTTIALQPGQSYTVIPNTTSPVSVASASANHKFTAVQWP*
Ga0126381_10000179312	3300010376	Tropical Forest Soil	MATPVPGPASSTSATPGTAVIAIAADQNGGYIVNPASAADQGLATVEVLYVNQVTNATLLANGTTIALQPGQSYSIIPNTVTAVTVAAASANHKFTSVQWND*
Ga0126381_1001027142	3300010376	Tropical Forest Soil	MATPIAGLAFQTPASAGVPVNAIAANQSGGYIVNPTTAADQGLTTAEVLYVNQVQNCTVQANGTTIALQPGQTYTIIPNTTTPVSVAAPSASHKFTAVQWA*
Ga0126383_122105142	3300010398	Tropical Forest Soil	PTNAIAANQSGGYIVNPLLAADQGLGSAEVLYVNQVGPSATAANGTTIALQPGQSYTVIPNTTTPVSVASLSANHKFTAVQWPQHDRNNNFS*
Ga0126383_136111402	3300010398	Tropical Forest Soil	MSTPVAGLNSQTSGTPGVPVNAISANQAGGYIVNPLLAADQGIGTAEPLYINQVGAAATVANGTTIALQPGQSYTVIPNTTTPVSVASLTASHKFTAVQWT*
Ga0126375_100892561	3300012948	Tropical Forest Soil	AIQSNQAGGYIVNPLLAADQGLTAAEVLYVNQVGPSDVQANGTTIALQPGQSYTVIPNTTTPVSVAAPSANHKFTAVQWL*
Ga0126369_115577852	3300012971	Tropical Forest Soil	MSVAPIAGLASQTSGTPGIPTNAIAANQQGGYVVNPLTAADQGIATAEVLYVNQVGPSDTQANGTTIALQPGQSYTVIPYTTTTVSVASLTANHKFTAVQWA*
Ga0157370_117314531	3300013104	Corn Rhizosphere	IKRSASMSTAVAGPASQTSATPGTAVTAIASNQSGGYITNPLNPADQGLVAAEPLFVNQVTNAALAANGTTVALQPGETYQVVPNTITPVTASAASPNHKFTSVQWV*
Ga0182036_102280722	3300016270	Soil	MAPPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0182036_113341511	3300016270	Soil	MTTPVVGIATQTPSTAGQPVAAIDINQAGGYITNPTNPGDQGLGESEVLYVNQVGPATLQANGTTIALQPGQTYSIIPYTQSQVSVASNSANHKFTAVQWAD
Ga0182041_109854192	3300016294	Soil	MATPVAGLASQTSATAGIPVNAIAANQSGGYIVNPLLPADQGLASAEVLFVNQVGPSSVQANGTTIALQPGQSYTVIPNTTTPVSVASLSANHKFTAVQWV
Ga0182033_104240142	3300016319	Soil	MAYTPVAGPATVTGASPGVAVTAISPNMSGGFIVNPLTAADQGIVTAEPLYVNQVTVATLNANGTTIALQPGQSYTVIPGTTTPVTCASSSANHKFTAVQWP
Ga0182035_101608252	3300016341	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSV
Ga0182032_110205071	3300016357	Soil	NAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0182034_113100522	3300016371	Soil	MTTPTAGPASVTSATPGVAVTAIAPNMSGGYIVNPLLAVDQGIATAEPLYINQVGAATLQANGTTVALQPGQSYTVIPQTTTPVTVSSASASHKFTSVQWP
Ga0182034_113723161	3300016371	Soil	MAYTPVAGPATVTGASPGVAVTAISPNMSGGFIVNPLTAADQGIVTAEPLYVNQVTVATLNANGTTIALQPGQSYTVIPGTTTPVTCASASANHKFTAVQWP
Ga0182040_113713552	3300016387	Soil	PTTPGTAIQAIPANQAGGYIVNPLSATDQGLAANEVLYVDQVGNAKTTANGTTIALQPGQSYTVVPFTVTVVSVASASASHKFTAVCWPTA
Ga0210406_102184311	3300021168	Soil	MAAPVAGANTQTPSTPGTAITVIPANQAGGYIVNPLSAEDQGLSNNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNSASHKFTAVCWPTA
Ga0210393_108671552	3300021401	Soil	STPGTAITVIPANQAGGYIVNPLNATDQGLPTNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNSASHKFTAVCWPTA
Ga0210397_103893221	3300021403	Soil	MAAPVAGANTQTPSTPGTAITVIPANQAGGYIVNPLSAEDQGLSNNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNS
Ga0210387_113668871	3300021405	Soil	MAAPVAGANTQTPSTPGTAITVIPANQAGGYIVNPLSAEDQGLSNNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNSASHKFTAVCW
Ga0210392_100026312	3300021475	Soil	MSKPTQGVAVVTPETPGEAVFAIGTNQAGGYIVNPLDAADQDQPEALPLYINQVNAATLWANGTTIALQPGQSYAVIPNTLTGVSVASAGAKHKFTAVQWV
Ga0210392_100302533	3300021475	Soil	MAAPVAGANTQTPSTPGTAITVIPANQAGGYIVNPLSATDQGLSTNEVLYVDQVGPAKTTANGTTLALQPGQSYSVIPNTLTPVTAASNSASHKFTAVCWPTA
Ga0210392_100547731	3300021475	Soil	MAAPVAGANTQTPSTPGTAITVIPANQAGGYIVNPLNATDQGLPTNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNSASHKFTAVCWPTA
Ga0210392_106819581	3300021475	Soil	ANTQTPSTPGTAITVIPANQAGGYIVNPLSAEDQGLSNNEVLYVDQVGPAKTTANGTTLALQPGQSYAVIPNTLTPVTAASNSASHKFTAVCWPTA
Ga0126371_1000066230	3300021560	Tropical Forest Soil	MATPAVGLATQTGSTPGIPTNAIGPNMSGGYIVNPLTAADQGLASAEVLYVNQVGAADTQANGTTIALQPGQSYTVIPNTTSPVSVASASANHKFTAVQWP
Ga0126371_105351903	3300021560	Tropical Forest Soil	TSIVAIDANQSGGYITNPFTAADQGLTTAEVLYVNQVTLAATSANGTTIALQPGQTYSIIPNTTTPVNVASISANHKFTAVEWP
Ga0126371_107783442	3300021560	Tropical Forest Soil	MSTPIAGLNAQTPTSAGVPINAIAANQSGGYIVNPTTAADQGIPTAEVLFVNQVGNCTIQANGTTLALQPGQTYTIIPNTTTPVSVASLTPNHKFTSVQWA
Ga0209067_109222122	3300027898	Watersheds	PIQGPATVTPATAGEPVLAISPNQAGGYIVNPLDETDQGLAVGEPLYVNQVGPATLQANNTTLALQPGQSYSVIPNTTTGVSVASASPNHKYTAVQWV
Ga0318516_101280462	3300031543	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFTAVQWV
Ga0318538_105550881	3300031546	Soil	MTTPTAGPASVTSTTPGVAVTAIAPNMSGGYIVNPLLAVDQGIATAEPLYINQVGAATLQANGTTVALQPGQSYTVIPQTTTPVTVSSASASHKFTSVQWP
Ga0310915_104695721	3300031573	Soil	MSTPVAGLASQTSATPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQSYTVIP
Ga0318542_101875521	3300031668	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTT
Ga0318572_105911491	3300031681	Soil	MSTPVAGLASQTSATPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQ
Ga0318572_108272312	3300031681	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFTA
Ga0306917_103057592	3300031719	Soil	MTTTPVAGLATQTSATPGLPVTAISANQSGGYIVNPLLAADQGIGTAEVLFVNQVGSAITNANGTTIALQPGQSYTVIPSTTTPVSVASLTANHKFTAVMWP
Ga0306917_112193982	3300031719	Soil	QTSATPGTSVIAILQNVAGGYIVNPLTAADQGLAATEALYVNQVTTADTHANNTTIALQPGQSYTVVPNTTTPVQVASLSASHKFTAVQWT
Ga0306918_115748632	3300031744	Soil	MTTTPVAGLATQTSATPGLPVTAISANQSGGYIVNPLLAADQGIGTAEVLFVNQVGSAITNANGTTIALQPGQSYTVIPSTTTPVSVASLTANHKFTA
Ga0318492_101164712	3300031748	Soil	MATPVAGTNTQTSITPGTSVIAIPVNQAGGYVVNPLSATDQGLAANEVLYVDQVGPAKLTANGTTIALQPGQSYTVVPNTITPVTVASNSASHKFTAVCWPTA
Ga0318492_105492371	3300031748	Soil	PGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0318537_100792741	3300031763	Soil	MSTPVAGLASQTSVTPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQS
Ga0318509_107261561	3300031768	Soil	GSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0318546_102691201	3300031771	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKF
Ga0318508_11539212	3300031780	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSASHKFTAVQWT
Ga0318547_109707253	3300031781	Soil	MSTPVAGLASQTSATPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPG
Ga0318550_102955022	3300031797	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFTAV
Ga0318497_107227891	3300031805	Soil	NAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQSYTVIPNTTTPVSVAANSPNHKFTAVQWV
Ga0318497_108350582	3300031805	Soil	MSTPLAGMAVQTSATPGVPVNAIGPNQSGGYIVNPLAALDQGLPSAEVLYVSQVGAADTNANNVTVALQPGQSYTVIPNTTTPVSVASNSASHKFTAVQWV
Ga0318564_101945022	3300031831	Soil	MTTTPVAGLATQTSATPGLPVTAISANQSGGYIVNPLLAADQGIGTAEVLFVNQVGSAITNANGTTIALQPGQSYTVIPSTTTPV
Ga0310917_100377231	3300031833	Soil	MTTPTAGPASVTSTTPGVAVTAIAPNMSGGYIVNPLLAVDQGIATAEPLYINQVGAATLQANGTTVALQPGQSYTVIPQTTTPVT
Ga0310917_110079792	3300031833	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTP
Ga0306925_103428212	3300031890	Soil	MTTPVAGLISQTSATPGIPANAISANQSGGYIVNPIAAADQGLAVAEVLFVNQVGNAITNANGTTIALQPGQSYTVIPLTTTPVSVCALSANHKFTAVMWP
Ga0306925_109941172	3300031890	Soil	MATPIAGPNTQTVTSGVPVIAIAQNQTGGYVVNPLLAVDQGLTTAEVLFLNQVGPSDTNANGTTIALQPGQSYTVIPNTTTPVTVAALSANHKFTAVQWV
Ga0318551_104461652	3300031896	Soil	MSTPVPGPASQTPSSAGLSVIAISQNVLGGYIVNPLLAADQGLATAEVLYVDQVQAAGTVANTTTIALQPGQSYTVIPNTTTPVQVASLSPSHKFTSVQWT
Ga0318520_100583491	3300031897	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0318520_106914122	3300031897	Soil	MATPVAGTNTQTSITPGTSVIAIPVNQAGGYVVNPLSATDQGLAANEVLYVDQVGPAKLTANGTTIALQPGQSYTVVPNTITPVTVASNSASHKFTAVCWPT
Ga0306921_102115643	3300031912	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYVVNPLLAADQGLGASEVLYINQVGAATVAANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0306921_115358382	3300031912	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVS
Ga0306921_116267921	3300031912	Soil	VTAIAPNMSGGYIVNPLLAVDQGIATAEPLYINQVGAATLQANGTTVALQPGQSYTVIPQTTTPVTVSSASASHKFTSVQWP
Ga0306921_119426512	3300031912	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYIVNPLLAADQGLGASEVLYINQVGAATVTANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0306921_122522192	3300031912	Soil	MTTTPVVGLAVQTGSTPGIPLNAISANQSGGYIVNPFAAADQGLAVAEVLFVNQVGNAITNANGTTIALQPGQSYTVIPNTTTAVSVASLSANHKFTAVMWP
Ga0306921_124484741	3300031912	Soil	MAVPAAGTNTQTPTTPGTAIQAIPANQAGGYIVNPLSATDQGLAANEVLYVDQVGNAKTTANGTTIALQPGQSYTVVPFTVTVVSVASASASHKFTAVCWPTA
Ga0310912_105231691	3300031941	Soil	VTAGVPVNAIAANQSGGYIVNPLLAADQGLGASEVLYINQVGAATVAANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0310912_109012921	3300031941	Soil	GTAIQAIPANQAGGYIVNPLSATDQGLAANEVLYVDQVGNAKTTANGTTIALQPGQSYTVVPFTVTVVSVASASASHKFTAVCWPTA
Ga0310916_100489701	3300031942	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYIVNPLLAADQGLGASEVLYINQVGAATVTANGTTIALQPGQSYTVIPLTTTPVSVAS
Ga0306926_104847861	3300031954	Soil	VTAGVPVNAIAANQSGGYVVNPLLAADQGLGASEVLYINQVGAATVTANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0306922_102311212	3300032001	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYVVNPLLAADQGLGASEVLYINQVGAATVTANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0306922_110024062	3300032001	Soil	MATTPTVGSATQTPSSPGIPVNAIAANVTGGYVVNPLLAADQGLATAEVLYVNQVQPSSTVGNGSTIVLQPGQSYTVIPNTTTPVSVCSLSASHKFTAVQWI
Ga0306922_110471262	3300032001	Soil	PNMSGGYIVNPLLAVDQGIATAEPLYINQVGAATLQANGTTVALQPGQSYTVIPQTTTPVTVSSASASHKFTSVQWP
Ga0318563_100877282	3300032009	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYIVNPLLAADQGLGASEVLYINQVGAATVAANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0318549_104303553	3300032041	Soil	MSTPVAGLASQTSATSGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQSYTVIPNTTTPVSVAANSPNHKFTAVQWV
Ga0318549_104370681	3300032041	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNT
Ga0318558_102139032	3300032044	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFT
Ga0318533_112290462	3300032059	Soil	TTPIAGANSQTSATPGVAVIAIPANQSGGYIVNPLLAADQGLGAAEPLMVDQVTSASENANGTTVGLEPGQSYTVIPGTTTPVTVVAASPSHKFTAVCWP
Ga0318505_105050852	3300032060	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSASHKFT
Ga0318504_105366252	3300032063	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLS
Ga0318510_101017282	3300032064	Soil	MATPNAGSASQTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPV
Ga0318513_102997501	3300032065	Soil	QTPTSPGVPVNAIAPNQSGGYIVNPLLAIDQGLTNAEVLYVNQVGPATVNANGTTIALQPGQSYTVIPNTTSPVSVASLSANHKFTSVQWA
Ga0318524_105258172	3300032067	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFTAVQW
Ga0306924_113061042	3300032076	Soil	MTTTPVAGLATQTSATPGLPVTAISANQSGGYIVNPLLAADQGIGTAEVLFVNQVGSAITNANGTTIALQPGQSYTVIPSTTTP
Ga0306924_126358482	3300032076	Soil	VNAIAANQSGGYIVNPLLPADQGLASAEVLFVNQVGPSSVQANGTTIALQPGQSYTVIPNTTTPVSVASLSANHQFTAVQWV
Ga0318518_106340542	3300032090	Soil	MSTPNAGSASQTPSSPGVPVNAIAANQSGGYVVNPLLAADQGLTNAEVLYVNQVGPATVVANGTTIALQPGQSYTVIPNTTTPVSVASNSANHKFT
Ga0318540_106011222	3300032094	Soil	SQTSATPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQSYTVIPNTTTPVSVAANSPNHKFTAVQWV
Ga0306920_1003822273	3300032261	Soil	MSTPVIGLATQTVTAGVPVNAIAANQSGGYVVNPLLAADQGLAATEVLYISQVGAATVAANGTTIALQPGQSYTVIPLTTTPVSVASPSGGHKFTAVQWP
Ga0306920_1015878602	3300032261	Soil	MSTPVAGLASQTSATPGIPVNAIAQNQTGGYIVNPLAASDQGIATAEVLYVNQVLPATVVGNGTTIVLQPGQSYTVIPNTTTPVSVAANSPNHKFTAVQWV
Ga0306920_1018742881	3300032261	Soil	MTTTPVAGLASQTGGTPGIPVSAIAANQSGGYIVNPFAAADQGLAVAEVLFVNQAGAAITNANGTTIALQPGQSYTVIPSTTTPVSVCSLSANHKFTAVQWP
Ga0306920_1029724322	3300032261	Soil	MATPVAGLASQTSATAGIPVNAIAANQSGGYIVNPLLSADQGLASAEVLFVNQVGPSSVQANGTTIALQPGQSYTVIPNTTTPVSVASLSANHQFTAVQWV
Ga0306920_1037379581	3300032261	Soil	TAVQGPNTQTSATPGTSVIAILQNVAGGYIVNPLTAADQGLAATEALYVNQVTTADTHANNTTIALQPGQSYTVVPYTTTPVQVSALSPSHRFTAVQWT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences