Metagenome / Metatranscriptome Family F091997

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091997
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	55 residues
Representative Sequence	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAA
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.33 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.813 % of family members)
Environment Ontology (ENVO)	Unclassified (70.093 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.813 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.06% β-sheet: 0.00% Coil/Unstructured: 50.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08281	Sigma70_r4_2	90.65
PF07350	DUF1479	1.87
PF08241	Methyltransf_11	0.93
PF00313	CSD	0.93
PF13418	Kelch_4	0.93
PF01494	FAD_binding_3	0.93
PF13376	OmdA	0.93
PF04616	Glyco_hydro_43	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.87
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.93
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.72 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.72 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	81.31 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.67 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.67 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.93 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Actinocatenispora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora thailandica	0.93 %
Actinoplanes atraurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes atraurantiacus	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100279593	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300002245\|JGIcombinedJ26739_101457784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300005363\|Ga0008090_15687078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300005518\|Ga0070699_100162480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1977	Open in IMG/M
3300005533\|Ga0070734_10007754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8535	Open in IMG/M
3300005537\|Ga0070730_10155356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1549	Open in IMG/M
3300006578\|Ga0074059_11971085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300006914\|Ga0075436_100756746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300006953\|Ga0074063_13907149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300007076\|Ga0075435_100439344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1125	Open in IMG/M
3300010360\|Ga0126372_11961372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300010361\|Ga0126378_10740869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300010366\|Ga0126379_11233237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300010867\|Ga0126347_1080107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300010876\|Ga0126361_10515113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1033	Open in IMG/M
3300011271\|Ga0137393_11440026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300012210\|Ga0137378_10423210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300012951\|Ga0164300_10196551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300012988\|Ga0164306_10900940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300016387\|Ga0182040_10359301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300016422\|Ga0182039_11505639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300016445\|Ga0182038_10969980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300016445\|Ga0182038_11181236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300021420\|Ga0210394_10636152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300021560\|Ga0126371_12109972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300021560\|Ga0126371_13517377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300024187\|Ga0247672_1090918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300025898\|Ga0207692_11175064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	509	Open in IMG/M
3300025905\|Ga0207685_10304223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300025906\|Ga0207699_10041320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2662	Open in IMG/M
3300027158\|Ga0208725_1012792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1387	Open in IMG/M
3300027765\|Ga0209073_10482946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300027894\|Ga0209068_10884376	Not Available	528	Open in IMG/M
3300028906\|Ga0308309_10775003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300031543\|Ga0318516_10473501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300031544\|Ga0318534_10730830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300031546\|Ga0318538_10477106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300031572\|Ga0318515_10392199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300031573\|Ga0310915_10927534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300031640\|Ga0318555_10044704	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300031640\|Ga0318555_10059767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1952	Open in IMG/M
3300031640\|Ga0318555_10509194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300031668\|Ga0318542_10219729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300031680\|Ga0318574_10494043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300031713\|Ga0318496_10522099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300031713\|Ga0318496_10664271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300031723\|Ga0318493_10054120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1908	Open in IMG/M
3300031724\|Ga0318500_10036326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2015	Open in IMG/M
3300031736\|Ga0318501_10309098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300031736\|Ga0318501_10555489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300031736\|Ga0318501_10804325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300031744\|Ga0306918_11323946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300031747\|Ga0318502_10179810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300031747\|Ga0318502_10937071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300031748\|Ga0318492_10323136	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031748\|Ga0318492_10543639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300031764\|Ga0318535_10078784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1420	Open in IMG/M
3300031764\|Ga0318535_10113542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1193	Open in IMG/M
3300031768\|Ga0318509_10804216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300031770\|Ga0318521_10145927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1341	Open in IMG/M
3300031779\|Ga0318566_10171982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300031781\|Ga0318547_10332392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300031781\|Ga0318547_10953401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300031794\|Ga0318503_10097492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300031797\|Ga0318550_10173484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300031797\|Ga0318550_10258082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	846	Open in IMG/M
3300031798\|Ga0318523_10599877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300031805\|Ga0318497_10840912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300031819\|Ga0318568_10636954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031820\|Ga0307473_11331526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300031821\|Ga0318567_10111110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1491	Open in IMG/M
3300031831\|Ga0318564_10068090	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300031860\|Ga0318495_10148600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300031879\|Ga0306919_10435374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300031890\|Ga0306925_11892685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300031893\|Ga0318536_10567662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300031896\|Ga0318551_10389189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300031910\|Ga0306923_11594354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300031912\|Ga0306921_10098643	All Organisms → cellular organisms → Bacteria	3383	Open in IMG/M
3300031912\|Ga0306921_12327236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora thailandica	561	Open in IMG/M
3300031941\|Ga0310912_10162685	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300031945\|Ga0310913_11140699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300031954\|Ga0306926_11570480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300032001\|Ga0306922_11002183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300032010\|Ga0318569_10463143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300032044\|Ga0318558_10004892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4672	Open in IMG/M
3300032044\|Ga0318558_10470673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300032044\|Ga0318558_10547699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes atraurantiacus	578	Open in IMG/M
3300032054\|Ga0318570_10107400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300032059\|Ga0318533_10929167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300032060\|Ga0318505_10589973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300032066\|Ga0318514_10715233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300032067\|Ga0318524_10357146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300032067\|Ga0318524_10374053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300032068\|Ga0318553_10218254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300032068\|Ga0318553_10545926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300032068\|Ga0318553_10587905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300032068\|Ga0318553_10625730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300032089\|Ga0318525_10060786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1887	Open in IMG/M
3300032261\|Ga0306920_102214662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300032895\|Ga0335074_10166981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2751	Open in IMG/M
3300033289\|Ga0310914_11001712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300033290\|Ga0318519_10998426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.20%
Plants	Host-Associated → Plants	1.87%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.78%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002795931	3300002245	Forest Soil	MLEDNLKTLFTLEAEADQPPSHISVPAAGYSARKRRRRRRAVTIGSPVLAAAAGI
JGIcombinedJ26739_1014577842	3300002245	Forest Soil	MLEDNLKALFTLEAEADQPPSHISVPAAGRSARQRRRRRRAVTIGSPVLAAAAVIAVIATSIA
Ga0008090_156870781	3300005363	Tropical Rainforest Soil	MLEDNLRTLFTLEAETDQPPSHISVPAADRSARVRQRLQRALAIG
Ga0070699_1001624801	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLEDNLRTLFTVEAAADQPPSHISVPAAGRSARVRQRLQRALTIGSP
Ga0070734_100077541	3300005533	Surface Soil	MLEDNLRTLFTLEAEADQPPSHISVPAAGHSARVRQRLQRALTIGS
Ga0070730_101553561	3300005537	Surface Soil	MLEDDLRTLFTLEAEVDQPPSHISVPAAGRSARMRQRQRRALTIASPLLATA
Ga0074059_119710851	3300006578	Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAATVTAVIVTSVALGGGGE
Ga0075436_1007567462	3300006914	Populus Rhizosphere	MLEDNLRTLFTVEAAADPPPSHISVPAAGRSARVRQRLQRALTIGGPLLAAAAVTAVI
Ga0074063_139071492	3300006953	Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAATVTAVI
Ga0075435_1004393441	3300007076	Populus Rhizosphere	MLEDNLRTLFTIEAEADQPPSRISVPAAGRSARVRQRLQRALTIGSPVLAAAAVTAVI
Ga0126372_119613721	3300010360	Tropical Forest Soil	MLEDNLRTLFTLEAEADQPSSHISVPAAGRSARVRQRLWRALTIGSPVLA
Ga0126378_107408691	3300010361	Tropical Forest Soil	MLEDNLRTLFTLEAEADQPPSHISVPAAGRSARVRQRLERTLTIGSPLLAAAAVTAVIATSVALGGGGERIARPTGPAPA
Ga0126379_112332371	3300010366	Tropical Forest Soil	MLEDDLRTLFTLEAEADQPLSHISVPAAGRSARVRRRLQRALTIGNPVLAAAAVTAVIVTSVVLVGGGQRS
Ga0126347_10801071	3300010867	Boreal Forest Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAA
Ga0126361_105151132	3300010876	Boreal Forest Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIATSVALGGGGE
Ga0137393_114400261	3300011271	Vadose Zone Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIAASVALGGGGDRI
Ga0137378_104232103	3300012210	Vadose Zone Soil	MLEDNLRTLFTVEAAADQPPSHISVPVAGRSARVRQRLQRALT
Ga0164300_101965512	3300012951	Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQR
Ga0164306_109009401	3300012988	Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQ
Ga0182040_103593013	3300016387	Soil	MLEDNLRTLFTLEAGADQPPSPISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAV
Ga0182039_115056391	3300016422	Soil	MLEDNLRTLFTLEAEADQPPSHISVPAAGRSARMR
Ga0182038_109699802	3300016445	Soil	MLEDNLRTLFTLEAGADQPPSPISVPAAGRSARVR
Ga0182038_111812361	3300016445	Soil	MLEDNLRTLFTLEAAADQPPSQISMPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVVATSFALFGG
Ga0210394_106361521	3300021420	Soil	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIA
Ga0126371_121099721	3300021560	Tropical Forest Soil	MLEDNLRMLFTLEAETDQPPSHISVPAAGRSARVRQRLLRALTIGSPALAAAAVIAVVATSVAITG
Ga0126371_135173772	3300021560	Tropical Forest Soil	MLEDNLRTLFTLEAEADQPPSHVSVPAADRSARVRRRLQRALTIGSPVLAAAAVTAVIVTSV
Ga0247672_10909182	3300024187	Soil	MLEDSLRTLFTAEAEADQPPSHISVPAAGRSARARRRLQRAFTIGSPLLAAAAVTAVIATSVALGGGGQRIA
Ga0207692_111750641	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLEDNLRTLFTVEAAADPPPSHISVPAAGRSARVRQRLQRALTIGGPLLAAAAVTAV
Ga0207685_103042231	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLEDNLRTLFTVEAAADPPPSHISVPAAGRSARVRQRLQRALTIG
Ga0207699_100413201	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLEDNLRTLFTVEAAADPPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAA
Ga0208725_10127921	3300027158	Forest Soil	MLEDNLKALFTLEAEADQPPSQISVPAAGHSALQRRRRRRAVTIGSPVLAA
Ga0209073_104829462	3300027765	Agricultural Soil	MLEDNLRTLFALEAEADQPPSQISVPAASRSARVRQRLQRILTIGSPVLAAAAVT
Ga0209068_108843761	3300027894	Watersheds	MLEDNLRTLFTVEAEADQPPSHISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIATSVALGGGRKQGAADSK
Ga0308309_107750032	3300028906	Soil	MLEDNLKTLFTLEAEADQPPSHISVPAAGYSARKRRR
Ga0318516_104735011	3300031543	Soil	MLEDNLRTLFTLETQADQPPSHISVPVASRSARGRQRLWRALTIGSPALAAAAVIAVV
Ga0318534_107308302	3300031544	Soil	MLEDHLRTLFTLEAEADQPPSPINVPAAGRNARVRQRRQR
Ga0318538_104771061	3300031546	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVL
Ga0318515_103921991	3300031572	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGS
Ga0310915_109275341	3300031573	Soil	MLEDNLRTLFTLEAGADQPPSPISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVA
Ga0318555_100447043	3300031640	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLTIGSPVLAAAAVTA
Ga0318555_100597671	3300031640	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRAL
Ga0318555_105091942	3300031640	Soil	MFEDNLRTLFTLEAEADQPPSQISVPVAGRNARVRQRRRRALMIGSPVLAAAAVIAVIATSVALAGGGER
Ga0318542_102197293	3300031668	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRALTIG
Ga0318574_104940431	3300031680	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIAT
Ga0318496_105220992	3300031713	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVALVGGGQRTP
Ga0318496_106642712	3300031713	Soil	MLEDNLRTLFTLEAEADQPPSHISVPAAGRSARVRQRLQRTVTVGSPLLAAAAVT
Ga0318493_100541204	3300031723	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIATSVALGSGGERTPSRA
Ga0318500_100363264	3300031724	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRALTIGSPLLAAAAVTAVIATAAEG
Ga0318501_103090982	3300031736	Soil	MFEDNLRTLFTLEAEADQPPSQISVPVAGRNARVRQRRRRALM
Ga0318501_105554891	3300031736	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVA
Ga0318501_108043251	3300031736	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGPSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGERI
Ga0306918_113239461	3300031744	Soil	MLEDNLRTLFTLEAAADQPPSQISMPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVALVGGGQ
Ga0318502_101798101	3300031747	Soil	MLEDNLRTLFTLEAAADQPPSHISVPAAGRSARMRQRQRRALTIGS
Ga0318502_109370711	3300031747	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVALVGGGQR
Ga0318492_103231362	3300031748	Soil	MLEDHLRTLFTLEAEADQPPSPINVPAAGRNARVRQRRQRALMIGSPVLAAAAVIAVIATSFALAGGGEKIPQPARR
Ga0318492_105436391	3300031748	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGPSARMRQRLQRALTIG
Ga0318535_100787843	3300031764	Soil	MLEDNLRTLFTLEATADQPPSHISVPVAGRSARGRQRLWRALTLSSPALA
Ga0318535_101135421	3300031764	Soil	MLEDNLRMLFTLEAGADQPPSPISVPAAGRSARVRQRLQRALIIGSPV
Ga0318509_108042162	3300031768	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLTIGSPVLAAAAVTAVVATSVALSG
Ga0318521_101459272	3300031770	Soil	MLEDNLRTLFTLEATADQPPSHISVPVAGRSARGRQRLWRALTLS
Ga0318566_101719821	3300031779	Soil	MLEDSLRTLFTLEAEADQPPSHISVPAAGRSARMRRRLQRALT
Ga0318547_103323921	3300031781	Soil	MLEDNLRTLFTLEAAADQPPSQISMPAAGRSARVRQRLQ
Ga0318547_109534011	3300031781	Soil	MLEDNLRTLFTLEAEAGQPPSHISVPAAGRSARVRRRLQRALGVGSPLLAAAAV
Ga0318503_100974921	3300031794	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLTIGS
Ga0318550_101734843	3300031797	Soil	MLEDDLRTLFTLEAEADQPPSQISVPAAGRSARVRQRLQRALTI
Ga0318550_102580822	3300031797	Soil	MLEDNLRTLFTLEATADQPPSHISVPVAGRSARRRQRLWRALTLSSPALAAAAVIAVVATSVALTGG
Ga0318523_105998771	3300031798	Soil	MLEDNLRTLFTLEAQADQPPSQISVPAAGRSARVRQRLQRALTIGSPL
Ga0318497_107674761	3300031805	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGERIPRPAKQA
Ga0318497_108409122	3300031805	Soil	MLEDNLRTLFTREAEADQPPPHISVPAAARSARARQRQRRALTIGSPVLAAAAV
Ga0318568_106369542	3300031819	Soil	MLEDNLRTLFTLEAEADQPPSYISVPAAGRSARVRQRLQRTLTIGSPVLAAAAV
Ga0307473_113315262	3300031820	Hardwood Forest Soil	MLEDNLRTLFTVEAAADPPPSHISVPAAGRSARVRQRLQRALTI
Ga0318567_101111103	3300031821	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLTIGSPVLAAAAVTAVVATSVA
Ga0318564_100680903	3300031831	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLTIGSPVLAAAGEGDPG
Ga0318499_101685432	3300031832	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGERIPRPAKQ
Ga0318495_101486001	3300031860	Soil	MLEDNLRMLFTLEAGADQPPSPISVPAAGRSARVRQRLQRALIIGSPVL
Ga0306919_104353741	3300031879	Soil	MLEDNLRMLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSPV
Ga0306925_118926851	3300031890	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLL
Ga0318536_105676621	3300031893	Soil	MLEDYLRTLFTLEAAADQPPSHISVPAAGRSARMRQRQRRALTIGSPVLAAAAVIVVIAT
Ga0318551_103891892	3300031896	Soil	MLEDYLRTLFTLEAAADQPPSHISVPAAGRSARMRQRQRRALTIGSPVLAAAAVIVVI
Ga0306923_115943542	3300031910	Soil	MLEDNLRTLFTREAEADQPPPHISVPAAARSARARQRQRRALTIGSP
Ga0306921_100986431	3300031912	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRVLT
Ga0306921_123272361	3300031912	Soil	MLEDDLRTLFTLEAEADQPPSCISVPAAGRSARVRQRLQRALI
Ga0310912_101626851	3300031941	Soil	MLEDNLRTLFALEAEADPPMSHISVPAAGRSARMRQRQRRALTIGSPVLAAA
Ga0310913_111406991	3300031945	Soil	MLEDNLRTLFTLEAQAELPPSQISVPAAGRSARVRQRLQRALTIGSPLLAAAAVIAVIAASVALGGG
Ga0306926_115704801	3300031954	Soil	MLEDNLRTLFTREAEADQPPPHISVPAAARSARARQRQ
Ga0306922_110021832	3300032001	Soil	MLEDNLRTLFTLEAEADQPPPHISVPAAARSARARQRQRRALTIGSPVLAAAAV
Ga0318569_104631432	3300032010	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVALVGGGQRSAR
Ga0310911_108108702	3300032035	Soil	MLEDDLRALFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGERIPRPAKQARPA
Ga0318558_100048928	3300032044	Soil	MFEDNLRTLFTLEAEADQPPSQISVPVAGRNARVRQRRRRALMIGSPVLAAAAVITVIAT
Ga0318558_104706731	3300032044	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGGSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGER
Ga0318558_105476991	3300032044	Soil	MLEDNLRTLFTLEATADQPPSHISVPVAGRSARRRQRLWRALTLSS
Ga0318570_101074003	3300032054	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIG
Ga0318533_109291671	3300032059	Soil	MLEDNLRTLFTLEAETDQPPSQISVPAAGRSARVRQR
Ga0318505_105899731	3300032060	Soil	MLEDNLRTLFTLEAGADQPPSLISVPAAGRSARVRQRLQRALIIGSP
Ga0318504_105042931	3300032063	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLLAAAAVIAVIAASFALLGGGERIPRPAKQARPAT
Ga0318514_107152332	3300032066	Soil	MLEDSLRTLFTLEAEADQPPSHISVPAAGRSARMRRRLQRALTIGSPVLAAAAV
Ga0318524_103571462	3300032067	Soil	MLEDNLRTLFTLEATADQPPSHISVPVAGRSARRRQRLWRALTLSSPALAAAAVIAVVATSVALTGGGERIARPTG
Ga0318524_103740531	3300032067	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQGALTIGSPLL
Ga0318553_102182541	3300032068	Soil	MLEDNLRTLFTLEAETDQPPSQISVPAAGRSARVRQRLLRALTIGSPALAAAAVIAV
Ga0318553_105459262	3300032068	Soil	MLEDNLRMLFTLEAGADQPPSPISVPAAGRSARVRQRLQRALIIGSPVLAAAAVTAVIVASVALVGGGQR
Ga0318553_105879051	3300032068	Soil	MLEDNLRTLFTLEAEADQPPSHISVPLAGRSARVRRRLQRALTLGSPLLAAAAVTAVIATSVALGG
Ga0318553_106257302	3300032068	Soil	MLEDNLRTLFTREAEADQPPPHISVPAAARSARARQRQRRAL
Ga0318525_100607861	3300032089	Soil	MLEDDLRTLFALEAEADQPPSQISVPAAGRSARMRQRLQRALTIGSPLLA
Ga0306920_1022146621	3300032261	Soil	MLEDNLRTLFTLEAETDQPPSQISVPAAGRSARVRQRLLRA
Ga0335074_101669811	3300032895	Soil	MLEDNLKTLFTLEAEADQPLSQISVPAAARSARLRQGQ
Ga0310914_110017121	3300033289	Soil	MLEDNLRTLFTLEAETDQPPSYISVPAAGRSARVRQRLQRTLTIGSPVLAAAAVTAVIVTSGALAGGGGR
Ga0318519_109984261	3300033290	Soil	MLEDNLRTLFTLEAEADQPPPHISVPAAARSARARQRQRRALTIGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091997

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences