Metagenome / Metatranscriptome Family F091805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091805
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	88 residues
Representative Sequence	MDRKLVGVLFTIFGLIFWAGTAAATPAGTVIGVSGSCTDHGHVLKRGDAVQVGDTLDVPASGNLKLQMADGSVISVAPGSSMT
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.79 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	93.46 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.355 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.056 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.12% β-sheet: 27.03% Coil/Unstructured: 55.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13374	TPR_10	25.23
PF04773	FecR	4.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
All Organisms	root	All Organisms	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
cellular organisms	root	All Organisms → cellular organisms	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.08 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Breoghaniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Breoghania	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae → Breoghania	0.93 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.93 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	0.93 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.93 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Paraburkholderia ribeironis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ribeironis	0.93 %
unclassified Breoghania	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae → Breoghania → unclassified Breoghania	0.93 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	0.93 %
Rhodoblastus acidophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	0.93 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Breoghania sp. L-A4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae → Breoghania → unclassified Breoghania → Breoghania sp. L-A4	0.93 %
Lyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Lyngbya	0.93 %
Paraburkholderia ribeironis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ribeironis	0.93 %
Rhodoblastus acidophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	0.93 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Lyngbya confervoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Lyngbya → Lyngbya confervoides	0.93 %
Breoghania sp. L-A4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae → Breoghania → unclassified Breoghania → Breoghania sp. L-A4	0.93 %
Paraburkholderia ribeironis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ribeironis	0.93 %
Rhodoblastus acidophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	0.93 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10375983	Not Available	577	Open in IMG/M
3300005167\|Ga0066672_10114039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1664	Open in IMG/M
3300005179\|Ga0066684_10088869	All Organisms → cellular organisms → Bacteria → Proteobacteria	1869	Open in IMG/M
3300005180\|Ga0066685_10769066	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300005187\|Ga0066675_10586630	Not Available	837	Open in IMG/M
3300005332\|Ga0066388_101315524	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300005332\|Ga0066388_104158163	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005332\|Ga0066388_106644445	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300005435\|Ga0070714_100078318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2872	Open in IMG/M
3300005713\|Ga0066905_101988857	Not Available	539	Open in IMG/M
3300005764\|Ga0066903_108108819	Not Available	538	Open in IMG/M
3300006102\|Ga0075015_100722397	Not Available	592	Open in IMG/M
3300006755\|Ga0079222_11569423	Not Available	622	Open in IMG/M
3300006797\|Ga0066659_11176680	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300006797\|Ga0066659_11703415	Not Available	532	Open in IMG/M
3300006954\|Ga0079219_11899630	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300007788\|Ga0099795_10565403	Not Available	537	Open in IMG/M
3300009792\|Ga0126374_11478371	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300010046\|Ga0126384_11066035	Not Available	739	Open in IMG/M
3300010361\|Ga0126378_10053501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ribeironis	3776	Open in IMG/M
3300010366\|Ga0126379_13581556	Not Available	520	Open in IMG/M
3300010373\|Ga0134128_11901350	Not Available	655	Open in IMG/M
3300010376\|Ga0126381_100309238	Not Available	2168	Open in IMG/M
3300010376\|Ga0126381_104654539	Not Available	528	Open in IMG/M
3300012203\|Ga0137399_11472594	Not Available	568	Open in IMG/M
3300012205\|Ga0137362_10916079	Not Available	748	Open in IMG/M
3300012212\|Ga0150985_104204717	Not Available	813	Open in IMG/M
3300012469\|Ga0150984_117690570	Not Available	553	Open in IMG/M
3300012683\|Ga0137398_11029101	Not Available	570	Open in IMG/M
3300012685\|Ga0137397_10677299	Not Available	766	Open in IMG/M
3300012685\|Ga0137397_11291266	Not Available	520	Open in IMG/M
3300012918\|Ga0137396_10751746	Not Available	718	Open in IMG/M
3300012971\|Ga0126369_13226279	Not Available	534	Open in IMG/M
3300016270\|Ga0182036_10119832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus acidophilus	1824	Open in IMG/M
3300016270\|Ga0182036_10188628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1501	Open in IMG/M
3300016319\|Ga0182033_10803284	Not Available	829	Open in IMG/M
3300016357\|Ga0182032_10009945	All Organisms → cellular organisms → Bacteria → Proteobacteria	5087	Open in IMG/M
3300016357\|Ga0182032_10106065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1995	Open in IMG/M
3300016387\|Ga0182040_10187933	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300016404\|Ga0182037_10898379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300018058\|Ga0187766_10986016	Not Available	599	Open in IMG/M
3300018433\|Ga0066667_12033612	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300020583\|Ga0210401_10129545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	2365	Open in IMG/M
3300021168\|Ga0210406_10279203	Not Available	1363	Open in IMG/M
3300021171\|Ga0210405_10659637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300021171\|Ga0210405_11370376	Not Available	516	Open in IMG/M
3300021178\|Ga0210408_10453616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Breoghaniaceae → Breoghania → unclassified Breoghania → Breoghania sp. L-A4	1020	Open in IMG/M
3300021384\|Ga0213876_10285144	Not Available	878	Open in IMG/M
3300021401\|Ga0210393_11568972	Not Available	523	Open in IMG/M
3300021403\|Ga0210397_10819396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Lyngbya → Lyngbya confervoides	719	Open in IMG/M
3300021420\|Ga0210394_10243672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1573	Open in IMG/M
3300021420\|Ga0210394_11244965	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300021433\|Ga0210391_11464826	Not Available	524	Open in IMG/M
3300021439\|Ga0213879_10090708	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300021474\|Ga0210390_10630753	Not Available	897	Open in IMG/M
3300021474\|Ga0210390_11494018	Not Available	535	Open in IMG/M
3300021559\|Ga0210409_10665327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300022533\|Ga0242662_10274675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300027303\|Ga0208999_1068611	Not Available	584	Open in IMG/M
3300027603\|Ga0209331_1126934	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300027737\|Ga0209038_10142240	Not Available	727	Open in IMG/M
3300027874\|Ga0209465_10166820	Not Available	1095	Open in IMG/M
3300027903\|Ga0209488_10075742	All Organisms → cellular organisms → Bacteria → Proteobacteria	2500	Open in IMG/M
3300031546\|Ga0318538_10399367	Not Available	744	Open in IMG/M
3300031546\|Ga0318538_10502321	Not Available	657	Open in IMG/M
3300031682\|Ga0318560_10463223	Not Available	686	Open in IMG/M
3300031723\|Ga0318493_10395055	Not Available	756	Open in IMG/M
3300031723\|Ga0318493_10877458	Not Available	507	Open in IMG/M
3300031744\|Ga0306918_10401321	Not Available	1068	Open in IMG/M
3300031753\|Ga0307477_10626407	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031753\|Ga0307477_10843384	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300031753\|Ga0307477_11072868	Not Available	526	Open in IMG/M
3300031754\|Ga0307475_11067349	Not Available	633	Open in IMG/M
3300031754\|Ga0307475_11164888	Not Available	601	Open in IMG/M
3300031763\|Ga0318537_10346582	Not Available	548	Open in IMG/M
3300031765\|Ga0318554_10186840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1179	Open in IMG/M
3300031768\|Ga0318509_10538967	Not Available	651	Open in IMG/M
3300031770\|Ga0318521_10446240	Not Available	774	Open in IMG/M
3300031771\|Ga0318546_10929776	Not Available	612	Open in IMG/M
3300031771\|Ga0318546_11066093	Not Available	568	Open in IMG/M
3300031779\|Ga0318566_10350233	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300031781\|Ga0318547_10568874	Not Available	702	Open in IMG/M
3300031794\|Ga0318503_10210402	Not Available	630	Open in IMG/M
3300031796\|Ga0318576_10070224	Not Available	1555	Open in IMG/M
3300031796\|Ga0318576_10266288	Not Available	809	Open in IMG/M
3300031805\|Ga0318497_10221499	Not Available	1047	Open in IMG/M
3300031823\|Ga0307478_11529932	Not Available	552	Open in IMG/M
3300031845\|Ga0318511_10266128	Not Available	771	Open in IMG/M
3300031890\|Ga0306925_10767966	Not Available	1003	Open in IMG/M
3300031893\|Ga0318536_10333884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300031896\|Ga0318551_10583026	Not Available	645	Open in IMG/M
3300031897\|Ga0318520_10297046	Not Available	972	Open in IMG/M
3300031910\|Ga0306923_10877291	Not Available	984	Open in IMG/M
3300031910\|Ga0306923_11203994	Not Available	809	Open in IMG/M
3300031910\|Ga0306923_12468947	Not Available	513	Open in IMG/M
3300031942\|Ga0310916_10534130	Not Available	998	Open in IMG/M
3300031945\|Ga0310913_10209808	Not Available	1362	Open in IMG/M
3300031946\|Ga0310910_10670761	Not Available	820	Open in IMG/M
3300031954\|Ga0306926_10683282	Not Available	1246	Open in IMG/M
3300031954\|Ga0306926_12304389	Not Available	596	Open in IMG/M
3300032044\|Ga0318558_10290771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300032054\|Ga0318570_10416677	Not Available	613	Open in IMG/M
3300032059\|Ga0318533_10697810	Not Available	745	Open in IMG/M
3300032059\|Ga0318533_11115714	Not Available	578	Open in IMG/M
3300032060\|Ga0318505_10560882	Not Available	537	Open in IMG/M
3300032066\|Ga0318514_10013993	All Organisms → cellular organisms → Bacteria → Proteobacteria	3523	Open in IMG/M
3300033290\|Ga0318519_10440827	Not Available	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.20%
Host-Associated	Host-Associated	2.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.33%
Plants	Host-Associated → Plants	2.80%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.33%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.05%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027303	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_103759831	3300003505	Forest Soil	MLFAGAAAATPAGTVVAVSGSCTDRGRVLKLGDTVQISDTVDVPEDGNLKLQMADGSVISVAPGSSMTVVSYNIGGSGRHVRLSLT
Ga0066672_101140393	3300005167	Soil	MERNLVGVLLAIFGLMLWTGAAAAAAAGTVIAVSGSCTDHDQLLNRGYAVQIGDTLDVPAGGNLKLQMADGSVISVAPSSSMTVASYN
Ga0066684_100888693	3300005179	Soil	MERNLVGVLLAIFGLMLWTGAAAAAPAGTVIAVSGSCTDHGQVLNRGYAVQIGDTLDVPAGGNLKLQMADGSVISVAPDSTTTVASYS
Ga0066685_107690661	3300005180	Soil	MERNLVGVLLAIFGLLLWTGAAAAAAAGTVIAVSGSCTDHGQVLNRGYAVQIGDTLDVPAGGNLKLQMAVGSVILIAPDSSVTVASYSIGGSGSDVRLSLTQGVLRAQVAS
Ga0066675_105866303	3300005187	Soil	MIERKLVGVPLAIFGLMLWAGPAAAVPAGTVIAVSGSPRDHGRVLNRGDPVQIGETLDVPTGGNLKL
Ga0066388_1013155241	3300005332	Tropical Forest Soil	MMQRKLVGALFAIFGLMPWSGAAAATPAGTVIQVSGSCTVHGRVLNRGDVVQVGDTLDVPAGGNLKLQMADGSAISIAPGSIITVAEYENAGFG
Ga0066388_1041581631	3300005332	Tropical Forest Soil	MGRNVIGVLLAILSVMLLADAAAAAPAGTVVVASGLCTDNGSVLKSGDAVQISDTVDVPTGGNLKLQMVDGSVISVAPGSSMTVASYNIGASGRHVRLSL
Ga0066388_1066444452	3300005332	Tropical Forest Soil	MIGSKLVGTLSAIFGLMLWAGTAAGTPAGTVIRVTGSCIDQGRVLNRGDMVQIGDSLEVPAGGNLQLRMIDGGVISVAEGTGMNVANYRDADS
Ga0070714_1000783184	3300005435	Agricultural Soil	MYKLLGGVREPVGRGASTIMERKLVGVLFTIFGLIFWAGAAAATPAGTVVGVSGSCTDHGRALNRGDVVQIGDTLDVPAGGNLKLQMADGSVISVAPDSSMTVA
Ga0066905_1019888571	3300005713	Tropical Forest Soil	LVGVVFAIVGLMLWAGAAAATPAGTVIGVSGSFTDHGHVLNRGDAVQVGDALDVPAGGSLKLQMVDRSVISVAPGSSFTVASYTSYGSGRDVRLLLAR
Ga0066903_1081088192	3300005764	Tropical Forest Soil	MERKLVGVLLTIFGLVFWAGAAVAMPAGTVIGVSGSCTDHGHVLKSGDAVQVGDTLDVPVGGNLKLR
Ga0075015_1007223972	3300006102	Watersheds	MRHKLIGTLFAILSLTLWAVAAPAATLAGTVVAVSGSCTDHGRVLKSGDAVQVSDTVNVPAGGHLQLRMADESVISIAPGSSMTVASYNVDAAGRYVKLSLTQ
Ga0079222_115694231	3300006755	Agricultural Soil	VGAGRRPPIRTVRRKFVSMLFAIFSLMLWADAASAITPAGTVDAVSGSCTAHHRVLKRNDAVQVGDTVDVPAGGKLKLRMADGSVISVAPDSSMTVATYDIGSAGRHAKLSLTWGL
Ga0066659_111766802	3300006797	Soil	MERNLVGVLLAIFGLMLWAGAAAAAPAGTVIAVSGSCTDHGHVLNRDETVQIGDTLDVPTGGNLKLQMADGSVIAVA
Ga0066659_117034151	3300006797	Soil	MRRKMVGVLFAIIGVMLLAGAAAAMPAGTVVVVSGSCTDHGRVLKSGDAVQISDAVEVPAGGNLKLQMADGSVISVAPSSSMTVASYNYGGSGRHVRLSLTQ
Ga0079219_118996301	3300006954	Agricultural Soil	MRIIQRKLIGAAFAIFDVMLWLGAMAATPAGKVILVSGSCTDHGHVLKLGDAVRIGETLEVPADGHLKLQMVDGSVISVAPSSSI
Ga0099795_105654032	3300007788	Vadose Zone Soil	MRRKLAGALFVPLGLMLWADAAPAATLAGAVVAVSGSCTAGGRVLKRGDAVQVGDTVDVSVGGNLKLRMADESVISVAPGSSMTVASYNVGGAGRYAK
Ga0126374_114783712	3300009792	Tropical Forest Soil	MMQRKLVGALFAIFGLMPWSGAAAATPAGTVIQVSGSCTDQGRVLNPGDVVQIGDTLDVPAGGHLKLRMADGSVISVASGS
Ga0126384_110660352	3300010046	Tropical Forest Soil	MERKLVGVLLTIFGLVFWAGAAVAMPAGTVIGVSGSCTDHGHVLKSGDAVQVGDTLDVPVGGNLKLRMADGSLISVASGAGMTVAGYSIDGPGRDVKLLLTQGVLRAEVTSVRGASKFEV
Ga0126378_100535013	3300010361	Tropical Forest Soil	MMQRKLVGALFAIFGLMPWSGAAAATPAGTVIQVSGSCTVHGRVLNRGDVVQVGDTLDVPAGGNLKLQMADGSAIS
Ga0126379_135815561	3300010366	Tropical Forest Soil	MLWAGTAAATPAGTVIRVTGSCIDQGRVLNRGDMLQIGDSLEVPPGGNLQLRMIDGGVISVAEGTRM
Ga0134128_119013502	3300010373	Terrestrial Soil	MERKLVGVLFTIFGLIFWAGAAAATPAGTVVGVSGSCTDHGRALNRGDVVQIGDTLDVPAGGNLKL*
Ga0126381_1003092383	3300010376	Tropical Forest Soil	MGRNVIGVLLAILSVMLLVDAAAATPAGTVVVASGLCTDNGSVLKSGDAVQISDTVDVPTGGNLKLQMVDGSVISVAPGSSMTVAS
Ga0126381_1046545391	3300010376	Tropical Forest Soil	MGRNVIGVLLAILSVMLLADAAAATPVGTVVVASGLCTDNGSVLKIGDAVQISDTVDVPTGGNLKLQMVDGSVISVAPGSSMTVAS
Ga0137399_114725941	3300012203	Vadose Zone Soil	MQRKFVVTLFAVLSLMLWADVAPAATLAGTVVAVSGSCTARGHALRLGDAVQVSDTVDVLAGSKLKLRMSDGSMISVGPGSSMTMASYSLDGAGRHANLLLTQGL
Ga0137362_109160791	3300012205	Vadose Zone Soil	MGRKLVGVLFAILGLMLWAGAAAATPAGTVVVVSGSCTDHGRVLKRGDAVPISDTVDVPAGGNLTLQMADGSVISVAPGSSMTVASYNIGGSGRHVKLSL
Ga0150985_1042047171	3300012212	Avena Fatua Rhizosphere	MLWADTASAITPAGTVDAVSGSCTAHRRVLKPNDAVQAGDTVDVPAGGKLKLRMADGSVISVAPDSSMTVATYDIGSA
Ga0150984_1176905701	3300012469	Avena Fatua Rhizosphere	MLWADAASAITPAGTVDAVSGSCTAHGRMLKRNDTVQVGDTIDVPAGGKLKLRMADGSVISVAPDSSMTVATYDIG
Ga0137398_110291011	3300012683	Vadose Zone Soil	MGRKLVGVLFAILGLMLWAGAAAATPAGTVVVVSGSCTDHGRVLKRGDAVPISDTVDVPAGGNLTLQMA
Ga0137397_106772991	3300012685	Vadose Zone Soil	MERKLVRVLFTTFSLMLSAYAAAAAPAGTVLSVSGSCTDHGRVLNRGDAVHIGDALNVPSGANLKLQMADGSVISV
Ga0137397_112912661	3300012685	Vadose Zone Soil	LTSGFDNQGAKLVGVPFAILGLTLWAGAVAAMPAGTVIGVSGSCTDHGHVLRPGDAVQIGDTVDVPCNLKLQMADGSVIS
Ga0137396_107517461	3300012918	Vadose Zone Soil	MGRKLVGVLFAILGLMLWAGAAAATLAGTVVVVSGSCTDHGRVLKRGDAVPISDTVDVPAGGNLTLQMADGSVISVAPGSSMTVASYNIG
Ga0126369_132262792	3300012971	Tropical Forest Soil	MDRKLVGVLFTIFGLIFWAGTAAATPAGTVIGVSGSCTDHGHVLKRGDAVQVGDTLDVPASGNLKLQMADGSVISVAPGSSMT
Ga0182036_101198322	3300016270	Soil	MVRKLVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVASDSSISVTSYSIDGSGRNVRLRLMG
Ga0182036_101886281	3300016270	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATPAGMVVAVSGICTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQM
Ga0182033_108032841	3300016319	Soil	MRRKLVGGVFVILGLMLWAGGGVATPAGTVAVVSGSCTDHDHVLKAGDAVQIGDTLEVPVGSHLKLQMVDGSVISVAPGSSITVERYKITSSGRDVKL
Ga0182032_100099451	3300016357	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQMTDRSVISVAGDSSMTVVSY
Ga0182032_101060654	3300016357	Soil	MPRFENTNRKLGVLFATLGLMLWADTAAATPAGTVVAVSGSCTDHGRVLDRGDAVQVGDTLDVPTGGNLKLQMTDRSVISVAPDSSMTVVGYSIDAP
Ga0182040_101879331	3300016387	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCIDDGRVLNRGDPAQIGDTLDVPAGSNLKLQMADGSMISVASDSTMTVTTYNINGSG
Ga0182037_108983791	3300016404	Soil	MERKLVWVPFAIGGLMLWAYAAAAMPAGTVIGVSGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISV
Ga0187766_109860161	3300018058	Tropical Peatland	MGRKLVGVPFAIGGLMLWAYAAAAMPAGTVIGVSGACTDHGRVLNRGDAVQIGDTLNVPSSANLELQMADGSVISVAPDSSISVTSYS
Ga0066667_120336122	3300018433	Grasslands Soil	MQRKLVGALFTIFGLMLWADAVAATPVGTVIGVSGSYTDRGRVLNHGDAVQIGDTLVVPAGGNLKLRMA
Ga0210401_101295453	3300020583	Soil	MQGKFLGTLFAILGLMLWADAAPAVTPAGTAVAVSGSCTARGRALKPGDAVQAGDTVDVPAGGKLKLRMADGSVISVAPGSSMTVESYHVGGAGRH
Ga0210406_102792032	3300021168	Soil	MQGKFLGTLFAILGLMLWADAAPAVTPAGTAVAVSGSCTARGRALKPGDAVQAGDTVDVPAGGKLKLRMADGSVISVAPGSSMTVESYYVGGAGRHVKLSLTQGSL
Ga0210405_106596371	3300021171	Soil	MRRKLVGALFVLLGLMLWADAAPAATLAGAVVAVSGSCTAGGRVLKRGDAVQVSDTVDVPVGGNLKLRMADESVISVAPGSSMTVASYNVGGAGRYAKISLTLGLLRA
Ga0210405_113703761	3300021171	Soil	MQGKFLGTLFAILGLMLWADAAPAVTPAGTAVAVSGSCTARGRALKPGDAVQAGDTVDVPAGGKLKLRMADGSVISVAPGSSMTVESYHVGGA
Ga0210408_104536161	3300021178	Soil	MLFAGAAAATPAGTVVAVSGSCTDRGRVLKLGDTVQISDTVDVPEDGNLKLQMADGSVISVAPGSSMTVASYNYGG
Ga0213876_102851442	3300021384	Plant Roots	VEIDGLTSARTRVGAGGAGIMRRKLIGTLFAIIGLMLWADAAPAAMPAGTVLAVSGSCTDQGRVLKRGDAVQVGDTVNVPAGGHLQLGMADGSVISVAPDSSVTVASYNLASTARYVRLS
Ga0210393_115689722	3300021401	Soil	MRRKLVGVVFVILGLMIWAGGGVATPAGTVAVVSGSCTDHGHVLKAGDAVQIGDTLEVPVGSHLKLRMVDGSVISVAPGS
Ga0210397_108193961	3300021403	Soil	MRRKLVGALFVLLGLMLWADAAPAATLAGAVVAVSGSCTAGGRVLKRGDAVQVSDTVDVPVGGNLKLRMADESVISFAPGSSKTVASYN
Ga0210394_102436721	3300021420	Soil	MERKLVGVLFTIFGLIFWAGAAAATPAGTVVGVSGSCTDHGRALNRGDVVQIGDTLDVPAGGNLKLQM
Ga0210394_112449651	3300021420	Soil	MQGKFLGTLFAILGLMLWADAAPAVTPAGTAVAVSGSCTARGRALKPGDAVQAGDTVDVPAGGKLKLRMADGSVISVAPG
Ga0210391_114648261	3300021433	Soil	MERKLVGVLFTIFGLIFWAGAAAATPGTVVGVSGSCTDHGRALNGGDVVQIGDTLDVPAGGNLKLQM
Ga0213879_100907082	3300021439	Bulk Soil	MQPKLLCTLFAVFGLILWADAASAAMPAGTVVAISGSCTARGRALRAGDPVQVSDTINVPAGSKLKLRMSDGSVIAVAPGSSMTLESYNFGGPGRYVKLSL
Ga0210390_106307532	3300021474	Soil	MRRKLVGVVFVILGLMIWAGGGVATPAGTVAVVSGSCTDHGHVLKAGDAVQIGDTLEVPVGSHLKLRMVDGSVISVAPGSSITVERYNIASSGRDVKLSL
Ga0210390_114940181	3300021474	Soil	LVGVLFTIFGLIFWAGAAAATPAGTVVGVSGSCTDHGRALNRGDVVQIGDTLDVPAGGNLKLQM
Ga0210409_106653271	3300021559	Soil	MLFAGAAAATPAGTVVAVSGSCTDRGRVLKLGDTVQISDTVDVPEDGNLKLQMADGSVISVAPGS
Ga0242662_102746752	3300022533	Soil	MQGKFLGTLFAILGLMLWADAAPAVTPAGTAVAVSGSCTARGRALKPGDAVQAGDTVDVPAGGKLKLRMADGSVISVAPGSSMTVESYYVGGAGR
Ga0208999_10686112	3300027303	Forest Soil	MSIVIHRAACRLGACAGRRPRIRTMRRKFVSMLFALFSLMPLADAASAITPAGTVDAVSGSCTAHGRVLKRGDMVQVSDTVEVPARGKLKLRMADGSLISIAADSSMTVASYDIGSAGRHGKLSLTRGLLRAVVVAVG
Ga0209331_11269341	3300027603	Forest Soil	LVGVLFAIFGVMLFAGAAAATPAGTVVAVSGSCTDRGRVLKLGGTVQISDTVDVPEDGNLKLQMADGSVISVAPGSSMTVASYNY
Ga0209038_101422402	3300027737	Bog Forest Soil	MQRKLLGVLFAIFGLILWAGAAAATPAGTVVGLSGSCTDRGHVLNRSDTVQIGDTLDVPAGASLKLRMADGSMISAASGTSI
Ga0209465_101668202	3300027874	Tropical Forest Soil	MQRKLVGALFAIFGLMPWSGAAAATPAGTVIQVSGSCTVHGRVLNRGDVVQVGDTLDVPAGGNLKLQMADGSAI
Ga0209488_100757423	3300027903	Vadose Zone Soil	MGRKLVGVLFAILGLMLWAGAAAATLAGTVVVVSGSCTDHGRVLKRGDAVPISDTVDVPAGGNLTLQMADGSVIS
Ga0318538_103993672	3300031546	Soil	MERKLFGVLFTIIGLIFWAGAAAATPAGTVIGVIGSCTDHGRVLTLGDVLQVGDTLEVPAGGNLKLQMADGSVISVASDSGVTVAAYNIDG
Ga0318538_105023212	3300031546	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQMTDRSVISVAGDSSMTVVSYSVDGPGRN
Ga0318560_104632231	3300031682	Soil	MGRKLVRVPFAIGGLVLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISVTSYSIDG
Ga0318493_103950552	3300031723	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISIASDSTMTVTTY
Ga0318493_108774581	3300031723	Soil	LVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISV
Ga0306918_104013212	3300031744	Soil	MERKLFGVLFTIIGLIFWAGAAAATPAGTVIGVIGSCTDHGRVLTLGDVLQVGDTLEVPAGGNLKLQMADGSVISVASDSGVTVAA
Ga0307477_106264071	3300031753	Hardwood Forest Soil	VRIEWIMQGKLVGALFAILGLMLWADAARAAMPAGTVVAVSGSCTARGHTLKPSDAVQVSDTINVPAGGKLKLRMADGSVISVAPGSSMTVESYNFGGGAGRDVKLWLTQGLLR
Ga0307477_108433841	3300031753	Hardwood Forest Soil	MQGKFLGTLFAILGLMLWADTAPAVTPAGTAVAVSGSCTARGRALKPGDVVQAGDTVDVPAGGKLKLRMADGSVISVAPGSSMTVESYHVGGA
Ga0307477_110728682	3300031753	Hardwood Forest Soil	MRRKLVGVVFVILGLMLWAEGGVATPAGTVAVVSGPCTDHGHVLKAGDTVQIGDTLEVPVGGHLKLQ
Ga0307475_110673492	3300031754	Hardwood Forest Soil	MRRKLVGVVFVILSLMLWAGGGVATPAGIVAVVSGSCTDHGHVLKAGDAVQIGDTLEVPGGSHLKLQMVDGSVMSVAPGSSITVERYNIASSGRD
Ga0307475_111648881	3300031754	Hardwood Forest Soil	MERKLFGVLFTIIGLIFWAGAAAATPAGTVIGVSGSCTDHGRVLNLGDVLQVGDTLEVPAGGNLKLQMADRSVISVASDSGVTVATYNIDGSG
Ga0318537_103465821	3300031763	Soil	MGRKLVGVPFAIGGLMLWAYAAAAMPAGTVIGVSGSCTDHGRVLNRGDAVQIGDTLNVPVSANLKMQMADGSVISVAPDSSLSVTSYSIDGSGRNVRL
Ga0318554_101868401	3300031765	Soil	MVRKLVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVASDSSISVTSYS
Ga0318509_105389672	3300031768	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCIDDGRVLNRGDPAQIGDTLDVPAGSNLKLQMADGSMISIAPDSTMTV
Ga0318521_104462402	3300031770	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISVASDSTMTV
Ga0318546_109297761	3300031771	Soil	MPRFENTNRKLGVLFATLGLMLWADTAAATPAGTVVAVSGSCTDHGRVLDRGDAVQVGDTIDVPTGGNLKLQMTDRSV
Ga0318546_110660932	3300031771	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCIDDGRVLNRGDPAQIGDTLDVPAGSNLKLQMADGSMISIAPDSTMTVTTYK
Ga0318566_103502331	3300031779	Soil	MERKLVWVPFAIGGLMLWAYAAAAMPAGTVIGVSGSCTDHGRALNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISVTSYS
Ga0318547_105688741	3300031781	Soil	MPRFENTNRKLGVLFATLGLMLWADTAAATPAGTVVAVSGSCTDHGRVLDRGDAVQVGDTLDVPTGGNLKLQMTDRSVISVAPDSSMTVVGYSIDAPSRNVRLS
Ga0318503_102104022	3300031794	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQMTDRSVISVAADSSMTVVSYSIDGPGR
Ga0318576_100702241	3300031796	Soil	MVRKLVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVASDSSISVTSYSIDGSGRNVRLRLM
Ga0318576_102662882	3300031796	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMVDGSMISIASDSTMTVT
Ga0318497_102214991	3300031805	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQMTDRSVISVAGDSSMTVVS
Ga0307478_115299321	3300031823	Hardwood Forest Soil	MRRKLVGVVFVILGLMIWAGGGVATPAGTVAVVSGSCTDHGHVLKAGDAVQIGDTLEVPVGSHLKLQMADGSVISVAPGSSITVERYNI
Ga0318511_102661282	3300031845	Soil	MGRKLVRVPFAIGGLVLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISVTSYSIDGSGRNVR
Ga0306925_107679661	3300031890	Soil	MRRKLVGGVFVILGLMLWAGGGVATPAGTVAVVSGSCTDHDHVLKAGDAVQIGDTLEVPVGSHLKLQMVDGSVISVAPGSSITV
Ga0318536_103338842	3300031893	Soil	MVRKLVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVASDSSISVTSYSIDGS
Ga0318551_105830262	3300031896	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISVASDS
Ga0318520_102970463	3300031897	Soil	LVRVPFAIGGLVLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISVTSYSID
Ga0306923_108772911	3300031910	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISVASDSTMTVTTYNING
Ga0306923_112039942	3300031910	Soil	MGRKLVGVPFAIGGLMAWAYAAAAMPAGTVIGVSGSCTDHGRVLNRGDAVQIGDTLNVPVSANLKMQMADGSVISVAPDSSLSVTSYSIDGSGRNVRLRLMGG
Ga0306923_124689471	3300031910	Soil	MPRFENTNRKLGVLFATLGLMLWADTAAATPAGTVVAVSGSCTDHGRVLDRGDAVQVGDTLDVPTGGNLKLQMTDRSV
Ga0310916_105341301	3300031942	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISVASDSTMTVTT
Ga0310913_102098081	3300031945	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQMTDRSVISVAGDSSMTV
Ga0310910_106707611	3300031946	Soil	MGRKLVRVPFAIGGLVLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVA
Ga0306926_106832822	3300031954	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISVASDSTMTVTTY
Ga0306926_123043891	3300031954	Soil	MGRKLVGVPFAIGGLMLWAHAAAAMPAGTVIGVSGSCTDNGRVLNRGDAVQIGDTLNVPAGAHLKLQM
Ga0318558_102907711	3300032044	Soil	MERKLVWVPFAIGGLMLWAYAAAAMPAGTVIGVSGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSISVTSYSIDGS
Ga0318570_104166772	3300032054	Soil	MPRFENTECKLVSVLFATFGLMLWADAAAATLAGMVVAVSGTCTDHGRVLDRGDAVQVGDTLDVPAGGNLKLQM
Ga0318533_106978101	3300032059	Soil	MRRKLVGGVFVILGLMLWAGGGVATPAGTVAVVSGSCTDHDHVLKAGDAVQIGDTLEVPVGSHLKLQMVDGSVISVAPGSSIT
Ga0318533_111157142	3300032059	Soil	LVGVLFTIFGLIFWASAAVASPAGTVIGVSGSCTDHGHVLNRGDVVQVGDTLDVPAGCNLKLRMTDGSVISVAPGSSMTVANYS
Ga0318505_105608821	3300032060	Soil	MPRFENTNRKLGVLFATLGLMLWADTAAATPAGTVVAVSGSCTDHGRVLDRGDAVQVGDTLDVPTGGNLKLQMTDRSVISVAPDSSMTVVGYSIDAPS
Ga0318514_100139931	3300032066	Soil	MVRKLVRVPFAIGGLMLWAYAAAAMPAGTVIGVNGSCTDHGRVLNRGDAVQIGDTLNVPASANLKLQMADGSVISVAPDSSI
Ga0318519_104408272	3300033290	Soil	MERNLFGMLFTLFGLTLWSGAAAATSAGTVIEVSGSCTDDGRVLNRGAPAQIGDTLDVPAGSNLKLQMADGSMISIASDSTM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences