NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091717

Metagenome / Metatranscriptome Family F091717

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091717
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 117 residues
Representative Sequence MKRTMTITLAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVRNTAPNGDQRSNVASAPPTRYAPSN
Number of Associated Samples 98
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.75 %
% of genes near scaffold ends (potentially truncated) 43.93 %
% of genes from short scaffolds (< 2000 bps) 85.98 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.234 % of family members)
Environment Ontology (ENVO) Unclassified
(33.645 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.467 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 43.33%    β-sheet: 8.33%    Coil/Unstructured: 48.33%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00296Bac_luciferase 4.67
PF01425Amidase 4.67
PF04392ABC_sub_bind 3.74
PF12867DinB_2 3.74
PF00881Nitroreductase 2.80
PF00903Glyoxalase 1.87
PF00072Response_reg 0.93
PF00501AMP-binding 0.93
PF13561adh_short_C2 0.93
PF07578LAB_N 0.93
PF09992NAGPA 0.93
PF02538Hydantoinase_B 0.93
PF00027cNMP_binding 0.93
PF05643DUF799 0.93
PF07978NIPSNAP 0.93
PF04191PEMT 0.93
PF01471PG_binding_1 0.93
PF01408GFO_IDH_MocA 0.93
PF13460NAD_binding_10 0.93
PF07589PEP-CTERM 0.93
PF05685Uma2 0.93
PF04237YjbR 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 4.67
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 4.67
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 3.74
COG0146N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunitAmino acid transport and metabolism [E] 1.87
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 0.93
COG3952Uncharacterized N-terminal domain of lipid-A-disaccharide synthaseGeneral function prediction only [R] 0.93
COG4380Uncharacterized conserved protein, DUF799 domainFunction unknown [S] 0.93
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01A4GFQAll Organisms → cellular organisms → Bacteria505Open in IMG/M
2199352025|deepsgr__Contig_35745All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101410952All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101413041All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300000955|JGI1027J12803_108770786All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300004009|Ga0055437_10022311All Organisms → cellular organisms → Bacteria → Proteobacteria1493Open in IMG/M
3300004024|Ga0055436_10284958All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005166|Ga0066674_10021826All Organisms → cellular organisms → Bacteria2772Open in IMG/M
3300005172|Ga0066683_10008282All Organisms → cellular organisms → Bacteria5308Open in IMG/M
3300005174|Ga0066680_10946395All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylohalobius → Methylohalobius crimeensis508Open in IMG/M
3300005180|Ga0066685_10270710All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1173Open in IMG/M
3300005332|Ga0066388_101171464All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1310Open in IMG/M
3300005347|Ga0070668_101350820All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300005439|Ga0070711_100223653All Organisms → cellular organisms → Bacteria1464Open in IMG/M
3300005440|Ga0070705_101810611All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylohalobius → Methylohalobius crimeensis518Open in IMG/M
3300005446|Ga0066686_10024633All Organisms → cellular organisms → Bacteria3434Open in IMG/M
3300005451|Ga0066681_10060008All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300005467|Ga0070706_100213818All Organisms → cellular organisms → Bacteria → Proteobacteria1800Open in IMG/M
3300005468|Ga0070707_101151979All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii741Open in IMG/M
3300005471|Ga0070698_101541331All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylohalobius → Methylohalobius crimeensis616Open in IMG/M
3300005518|Ga0070699_101157001All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005536|Ga0070697_100359507All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300005539|Ga0068853_102477933All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii502Open in IMG/M
3300005576|Ga0066708_10202060All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1247Open in IMG/M
3300005713|Ga0066905_100180209All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300005713|Ga0066905_100338249All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300005764|Ga0066903_101813415All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300006796|Ga0066665_10074960All Organisms → cellular organisms → Bacteria2413Open in IMG/M
3300006845|Ga0075421_100630994All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300006852|Ga0075433_11869463All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylothermus515Open in IMG/M
3300007265|Ga0099794_10760919All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300009012|Ga0066710_100593473All Organisms → cellular organisms → Bacteria → Proteobacteria1679Open in IMG/M
3300009038|Ga0099829_10613811All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300009088|Ga0099830_10650730All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300009089|Ga0099828_11205755All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300009090|Ga0099827_10189569All Organisms → cellular organisms → Bacteria → Proteobacteria1705Open in IMG/M
3300009147|Ga0114129_10479756All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300009792|Ga0126374_10280733All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1105Open in IMG/M
3300010046|Ga0126384_10012518All Organisms → cellular organisms → Bacteria → Proteobacteria5328Open in IMG/M
3300010046|Ga0126384_10534003All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300010047|Ga0126382_10222007All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300010047|Ga0126382_10515358All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylohalobius → Methylohalobius crimeensis965Open in IMG/M
3300010047|Ga0126382_10810574All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300010109|Ga0127497_1026604All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300010119|Ga0127452_1149120All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium956Open in IMG/M
3300010124|Ga0127498_1014458All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300010130|Ga0127493_1087749All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300010154|Ga0127503_10890979All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300010301|Ga0134070_10075878All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300010320|Ga0134109_10029059All Organisms → cellular organisms → Bacteria → Proteobacteria1747Open in IMG/M
3300010323|Ga0134086_10321583All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300010335|Ga0134063_10080944All Organisms → cellular organisms → Bacteria1455Open in IMG/M
3300010359|Ga0126376_10050035All Organisms → cellular organisms → Bacteria2952Open in IMG/M
3300010359|Ga0126376_12533805All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylothermaceae → Methylohalobius → Methylohalobius crimeensis561Open in IMG/M
3300010360|Ga0126372_10063649All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2580Open in IMG/M
3300010360|Ga0126372_10213689All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1619Open in IMG/M
3300010362|Ga0126377_11069473All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300010362|Ga0126377_12494267All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300011269|Ga0137392_10472285All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300011437|Ga0137429_1097276All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300012096|Ga0137389_11163073All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012189|Ga0137388_11005956All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300012198|Ga0137364_10926947All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012200|Ga0137382_10289593All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1141Open in IMG/M
3300012202|Ga0137363_10012911All Organisms → cellular organisms → Bacteria5400Open in IMG/M
3300012205|Ga0137362_10295759All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1401Open in IMG/M
3300012206|Ga0137380_10031730All Organisms → cellular organisms → Bacteria4871Open in IMG/M
3300012207|Ga0137381_10328057All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1333Open in IMG/M
3300012208|Ga0137376_10361510All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300012210|Ga0137378_11768968All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012211|Ga0137377_11200544All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300012363|Ga0137390_10323935All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300012379|Ga0134058_1233393All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium563Open in IMG/M
3300012402|Ga0134059_1020949All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300012404|Ga0134024_1342340All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012406|Ga0134053_1254056All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium798Open in IMG/M
3300012409|Ga0134045_1087563All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300012685|Ga0137397_10010120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6562Open in IMG/M
3300012922|Ga0137394_11271273All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012925|Ga0137419_10519471All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012929|Ga0137404_10263641All Organisms → cellular organisms → Bacteria → Proteobacteria1483Open in IMG/M
3300012929|Ga0137404_11113147All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300012930|Ga0137407_11756035All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300012944|Ga0137410_10121051All Organisms → cellular organisms → Bacteria1964Open in IMG/M
3300012948|Ga0126375_11870641All Organisms → cellular organisms → Bacteria → Proteobacteria526Open in IMG/M
3300013306|Ga0163162_11711225All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300014324|Ga0075352_1034697All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1128Open in IMG/M
3300014873|Ga0180066_1073450All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300015264|Ga0137403_11205786All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis oxyfera603Open in IMG/M
3300015358|Ga0134089_10318387All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300015371|Ga0132258_11032271All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300015372|Ga0132256_102536581All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300015373|Ga0132257_100729986All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300015374|Ga0132255_103120375All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300017659|Ga0134083_10465672All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis oxyfera561Open in IMG/M
3300018431|Ga0066655_10013490All Organisms → cellular organisms → Bacteria3622Open in IMG/M
3300018433|Ga0066667_10024125All Organisms → cellular organisms → Bacteria3300Open in IMG/M
3300025916|Ga0207663_10966962All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300026306|Ga0209468_1094666All Organisms → cellular organisms → Bacteria → Proteobacteria973Open in IMG/M
3300026313|Ga0209761_1306902All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300026343|Ga0209159_1265984All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026358|Ga0257166_1058779All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300026537|Ga0209157_1022972All Organisms → cellular organisms → Bacteria3784Open in IMG/M
3300027846|Ga0209180_10468958All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300027907|Ga0207428_10528328All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300031231|Ga0170824_126438463All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300032205|Ga0307472_100546083All Organisms → cellular organisms → Bacteria → Proteobacteria1010Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.15%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.80%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.87%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.87%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010109Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010124Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_021590002170459005Grass SoilMTVMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGGQRSNVASAPPTRYAPSNQT
deepsgr_002403902199352025SoilMVAESRGSEEDDAMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGG
INPhiseqgaiiFebDRAFT_10141095223300000364SoilMKRTMTITLAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVRNTAPNGDQRSNVASAPPTRYAPSN
INPhiseqgaiiFebDRAFT_10141304113300000364SoilMVAESRGSEEDDAMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVRNTAPNGDQRSN
JGI1027J12803_10877078633300000955SoilLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPNTQK*
Ga0055437_1002231123300004009Natural And Restored WetlandsMKRTMTIALAVALLGLPMAARADDGQDLARGAGSAFGTLVYTPLKTSFCILGAIGSGFTYMVDSKTGAKVARGACGGTWVITPSAVGGREPVHFVGNTAPNGGQ*
Ga0055436_1028495823300004024Natural And Restored WetlandsIALAVALLGMPMAARADDGQDLARGAGSAFGTLVYTPLKTSFCILGAIGSGFTYMVDSKTGAKVARGACGGTWVITPSAVGGREPVHFVGNTAPNGGQ*
Ga0066674_1002182613300005166SoilVALTLGLPLAGWADDGRQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERRGARR*
Ga0066683_1000828263300005172SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0066680_1094639513300005174SoilMKRTVAIGLVALTLGLPLAGWADGGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0066685_1027071023300005180SoilMKRTVAIGLVALTLGLPPAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0066388_10117146413300005332Tropical Forest SoilMKSILTIGLVVALLGMPMAAWGDDGKEVAQTAGSVFGTLVYAPVKASFCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGDTAP
Ga0070668_10135082013300005347Switchgrass RhizosphereMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0070711_10022365313300005439Corn, Switchgrass And Miscanthus RhizosphereMVAESRGSEEDDAMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0070705_10181061113300005440Corn, Switchgrass And Miscanthus RhizosphereQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0066686_1002463333300005446SoilMKRTVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0066681_1006000823300005451SoilMKRMITIGLVVALLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0070706_10021381813300005467Corn, Switchgrass And Miscanthus RhizosphereMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0070707_10115197913300005468Corn, Switchgrass And Miscanthus RhizosphereVMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0070698_10154133113300005471Corn, Switchgrass And Miscanthus RhizosphereLAVALLGLPTVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK
Ga0070699_10115700123300005518Corn, Switchgrass And Miscanthus RhizosphereMVAESRGSEEDDAMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNG
Ga0070697_10035950723300005536Corn, Switchgrass And Miscanthus RhizosphereMKRTMTITLAFALLALPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGKEPVHFVGNTAPNGDQRSHVASAPPTQYAQSKQKAPSTQK*
Ga0068853_10247793313300005539Corn RhizosphereGRPTRGAWPRAAMVAESRGSEEDDAMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0066708_1020206023300005576SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYIVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0066905_10018020933300005713Tropical Forest SoilMKRLLTIVLVVALFGLPTAARGEDGQQVAQTAGSVFGTLVYAPVKTSFCILGAIGSGFTYMADSTTAGKVARASCGGTWIITPNAVAGKESVHFVGNTEPSGEARTHVAGVPPNRK*
Ga0066905_10033824923300005713Tropical Forest SoilMKRMITMGFVVALLGLPIAVWGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARQ*
Ga0066903_10181341513300005764Tropical Forest SoilMRHRAAMSIALVIALLGLPTAARADEPGKSVAYGAGSAFGTLVYAPVKASVCILGAIGSGFTYMVDSQTAGKVARSSCGGTWVITPDAVAGKESVHFLGNTAPDDGLHAAAAPTRNR*
Ga0066665_1007496033300006796SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGNVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0075421_10063099423300006845Populus RhizosphereMKRMLTIGLVVALFGLPTTARGDDGQQVAQTAGSVFGTLVYAPVKASFCILGAIGSGFTYMADSTTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEARTHVAGGPSSRK*
Ga0075433_1186946313300006852Populus RhizosphereVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0099794_1076091913300007265Vadose Zone SoilVALLGLPMVTRADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYIVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPDGDQRSRVASAPPTQYAPNKQKAPSTQK*
Ga0066710_10059347343300009012Grasslands SoilGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK
Ga0099829_1061381113300009038Vadose Zone SoilMKRTMTIALAVALLGLPMVTRADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0099830_1065073013300009088Vadose Zone SoilMKRTMTITLAVALLGLPMVARADDDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSKQTAPSTQK*
Ga0099828_1120575513300009089Vadose Zone SoilMKRTMTITLAVALLGLPMVAWADDDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNETVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQ
Ga0099827_1018956933300009090Vadose Zone SoilMKHTMTITLAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0114129_1047975613300009147Populus RhizosphereMNAMKRMLTIGLVVALFGLPTTARGDDGQQVAQTAGSVFGTLVYAPVKASFCILGAIGSGFTYMADSTTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEARTHVAGGPSSRK*
Ga0126374_1028073313300009792Tropical Forest SoilMRHRIAIALAIALLGLPTAARADDDAGKRVAYGAGSAFGTLVYAPVKASVCILGAIGSGFTYMVDSQTAGKVARSSCGRTWVITPNAVAGKESVHFLGNTAPDDGRHAAAAPARNR*
Ga0126384_1001251833300010046Tropical Forest SoilMRAMKRMITIGLVVALFALPTAARGDDGREVAQTAGSVFGTLVYTPVKASVCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPDAVAGKEPVHFVGNTEPSGEGRANVAGAHSARNK
Ga0126384_1053400323300010046Tropical Forest SoilMSIALVIALLGLPTAALADDAGKRVAYGAGSVFGTLVYAPVKASVCILGAIGSGFTYMVDSPTAGKVARSSCGGTWVITPDAVAGKESVHFLGNTAPDDGRHAAGARAQK*
Ga0126382_1022200713300010047Tropical Forest SoilMITMGLVVALLGLPIAVWGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTH
Ga0126382_1051535813300010047Tropical Forest SoilMKRMITIGLVVALFGSPTAALADNGNEVAETAGSVFGTLVYAPVKASFCILGAIGSGFAYMADSKTAGKVARASCGGTWIITPDAVAGKEPVHFVGGTEPSGEGRTHVTGAPSTRK*
Ga0126382_1081057413300010047Tropical Forest SoilITIGLVVALFALPTAARGDDGGEVAQTAGSVFGTLVYTPVKASFCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPSAVAGKESVHFVGNTEPSGEDRTHAAGATRARR*
Ga0127497_102660423300010109Grasslands SoilWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0127452_114912023300010119Grasslands SoilMKRTVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPRAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0127498_101445813300010124Grasslands SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGPRR*
Ga0127493_108774923300010130Grasslands SoilMKRTVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGPRR*
Ga0127503_1089097923300010154SoilMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSRTGSKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDRRSNVASAPPTRYAPSKQTAPSSQN*
Ga0134070_1007587823300010301Grasslands SoilMITIGLVVAQLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0134109_1002905933300010320Grasslands SoilMITIGLVVALLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0134086_1032158323300010323Grasslands SoilLPMAVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0134063_1008094413300010335Grasslands SoilMITIGLVVALLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPVKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK*
Ga0126376_1005003553300010359Tropical Forest SoilMNAMKRLLTIVLVVALFGLPTAARGDDGQQVAQTAGSVFGTLVYAPVKTSFCILGAIGSGFTYMADSTTAGKVARASCGGTWIITPNAVAGKESVHFVGNTEPSGEARTHVAGVPPNRK*
Ga0126376_1253380513300010359Tropical Forest SoilMMTIGLVVALLGLPMAARDDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGED
Ga0126372_1006364923300010360Tropical Forest SoilMKSILTIGLVVALLGMPMAARGDDGKEVAQTAGSVFGTLVYTPVKASFCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGDTAPSAEDRARSAGPPSARK*
Ga0126372_1021368923300010360Tropical Forest SoilMSIALVIALLGLPTAARADEPGKSVAYGAGSAFGTLVYAPVKASVCILGAIGSGFTYMVDSQTAGKVARSSCGRTWVITPNAVAGKESVHFLGNTAPDDGRHAAAAPARNR*
Ga0126377_1106947323300010362Tropical Forest SoilMKSILTIGLVVALLGMPMAAWGDDGKEVAQTAGSVFGTLVYAPVKASFCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGDTAPSAEDRARSAGPPSARK*
Ga0126377_1249426713300010362Tropical Forest SoilMITMGFVVALLGLPIAVWGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGED
Ga0137392_1047228513300011269Vadose Zone SoilMKRTMTITLAVALLGLPMVAWADDDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSKQTAPSTQK*
Ga0137429_109727613300011437SoilTLLGGPMTSRADDVQEVPRGAGSAFRTLVYTPVKTSFCILGAIGGGFTYMVDSKTGSKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGNQRSNVASAPPTQYAPSKQTAPSTQK*
Ga0137389_1116307313300012096Vadose Zone SoilMTIALAVALLGLPMVAQADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSKQTAPSTQK*
Ga0137388_1100595623300012189Vadose Zone SoilMKRTKTIALAVALLGLPVVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPDGDQRSRVVSAPPTQYAPNKQKAPSTQK*
Ga0137364_1092694713300012198Vadose Zone SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTFMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0137382_1028959313300012200Vadose Zone SoilMKRTVAIGLVALTLGLPLAGWADDGRQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGATQPRDGERKVASGIPERSGARR*
Ga0137363_1001291123300012202Vadose Zone SoilMKRTMTIALAVALLGLPMVTRADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPDGGQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0137362_1029575913300012205Vadose Zone SoilMKRTMTIALAVALLGLPMVTRADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGGQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0137380_1003173053300012206Vadose Zone SoilMKRTIAITLALALLGLPMVARADDGQEVARGAGSAFGTLVYMPVKASFCILGAIGSGFTYMVDSKTAGKVARGSCGGSWVITPSAVAGKEPVHFVGNTAPEGERTHVAATAPTQPTQKPSQPTQK*
Ga0137381_1032805733300012207Vadose Zone SoilMKRTIAITLALALLGLPMVARADDGQEVARGAGSAFGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVARGSCGGSWVITPSAVAGKEPVHFVGNTAPEGERTHVAATAPTQPTQKPSQPTQK*
Ga0137376_1036151023300012208Vadose Zone SoilMKRTVAIGLVALTLGLPLAGWADDGRQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGATQPRD
Ga0137378_1176896813300012210Vadose Zone SoilAVALLGLPMVARADDDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK
Ga0137377_1120054413300012211Vadose Zone SoilVASRGYAEEDDAMKRTMTIALAVALLGLPMVARADDGQEVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDAKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGD
Ga0137390_1032393523300012363Vadose Zone SoilMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNETVHFVGNTAPDGGQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0134058_123339313300012379Grasslands SoilPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGPRR*
Ga0134059_102094913300012402Grasslands SoilMKRTVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVTPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0134024_134234013300012404Grasslands SoilTEDEAMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0134053_125405613300012406Grasslands SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPRAVAGKEPVRFVGTTQPRDGERKVASGIPERSGPRR*
Ga0134045_108756313300012409Grasslands SoilEAMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR*
Ga0137397_1001012063300012685Vadose Zone SoilMMMKRTVAMGLVVLMLGLPMAGWADDGQQVAHGAGSAFGTLVYTPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWIITPSAVAGKESVRFVGKTEPLGSERKLAAGASERSGAGR*
Ga0137394_1127127323300012922Vadose Zone SoilDAMKRTMTIALAVALLGLPMVARADDGQEVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKIARGACGGTWVITPSAVGGKEPVHFVGNTAPNGDQRSHVASAPPTQYAQSKQKAPSTQK*
Ga0137419_1051947113300012925Vadose Zone SoilMASRGYAEEDDAMKRTMTIALAVALLGLPMVAQADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKIARGACGGTWVITPSAVGGK
Ga0137404_1026364123300012929Vadose Zone SoilMKRTMTIALAVALLGLPMPARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPDGDQRSRVASAPPTQYAPNKQKAPSTQK*
Ga0137404_1111314713300012929Vadose Zone SoilMMNRTVAMGLVVLMLGLPMAGWADDGQQVAHGAGSAFGTLVYTPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWIITPSAVAGKESVRFV
Ga0137407_1175603513300012930Vadose Zone SoilMKGTMTIALAVALLGLPMVARADDGQEVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPDGDQRSRVASAPPTQYAPNKQKAPSTQK*
Ga0137410_1012105133300012944Vadose Zone SoilMASRGYAEEDDAMKRTMTIALAVALLGLPMVARADDGQEVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKIARGACGGTWVITPSAVGGKEPVHFVGNTAPNGDQRSHVASAPPTQYAQSKQKAPSTQK*
Ga0126375_1187064113300012948Tropical Forest SoilMKLMITIGLVVVVLGLPMVAWGDAGKEVAQGAGSVFGTLVYAPVKTSFCILGAIGSGFTYIADSKTAGKMARASCGGSWVVTPNAVAGKEPVRFVGH
Ga0163162_1171122523300013306Switchgrass RhizosphereMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSQTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK*
Ga0075352_103469713300014324Natural And Restored WetlandsMKRTMTIALAVALLGLPMAARADDGQDLARGAGSAFGTLVYTPLKTSFCILGAIGSGFTYMVDSKTGAKVARGACGGTWVITPSAVGGKEPVHFVGN
Ga0180066_107345023300014873SoilMKRMMAIGLALALLGGPMTARADDGQDVARGAGSAFGTLVYTPVKTSFCILGAIGSGFTYMVDSKTGAKVARGACGGTWVITPSAVAGKEPVHFVGNTAPNQK*
Ga0137403_1120578613300015264Vadose Zone SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPMKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGAR
Ga0134089_1031838713300015358Grasslands SoilMKRTVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVG
Ga0132258_1103227123300015371Arabidopsis RhizosphereMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWIITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNETAPSTQK*
Ga0132256_10253658113300015372Arabidopsis RhizosphereMSIALAIALLGLPTAARADDAGKSVAYGAGSAFGTLVYMPVKASACILGAIGSGFTYMVDSQTAGKVARTSCGGTWVITPNAVAGKESVHFLGNTAPDD
Ga0132257_10072998633300015373Arabidopsis RhizosphereMKRTMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNETAPSTQK*
Ga0132255_10312037523300015374Arabidopsis RhizosphereLLGLPTAARADDAGKSVAYGAGSAFGTLVYAPVKASACILGAIGSGFTYMVDSQTAGKVARSSCGGTWGITPNAVAGKESVHFLGNTAPDDGRHAAAAPTRNR*
Ga0134083_1046567213300017659Grasslands SoilMKRMITIGLVVALLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPVKASFCILGAIGSGFTYIADSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK
Ga0066655_1001349053300018431Grasslands SoilMKRTVAIGLVALTLGLPPAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR
Ga0066667_1002412523300018433Grasslands SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR
Ga0207663_1096696213300025916Corn, Switchgrass And Miscanthus RhizosphereMTIALAVALLGLPMVARADDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQK
Ga0209468_109466613300026306SoilMKRMITIGLVVALLGLPMAVRGDDGKEVAQNAGSLFGTLVYAPLKASFCILGAIGSGFTYIVDSKTAGKVARASCGGTWVITPNAVAGKESVHFVGNTEPSGEDRTHAAGATRARK
Ga0209761_130690213300026313Grasslands SoilLTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR
Ga0209159_126598413300026343SoilMKRTVAIGLVALTLGLPLAGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPE
Ga0257166_105877913300026358SoilMKRTMTIALAVALLGLPMVARADDGQEVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSHV
Ga0209157_102297213300026537SoilVAIGLVALTLGLPLGGWADDGQQVAYGAGSALGTLVYAPVKASFCILGAIGSGFTYMVDSKTAGKVAQGSCGGTWVITPSAVAGKEPVRFVGTTQPRDGERKVASGIPERSGARR
Ga0209180_1046895813300027846Vadose Zone SoilMKRTMTITLAVALLGLPMVTRADDDGQAVARGAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVGNTAPNGDQRSNVASAPPTRYAPSNQTAPSTQKK
Ga0207428_1052832813300027907Populus RhizospherePGLLLGLPAAARADDAGKSVAYGAGSAFGTLVYMPVKASACILGAIGSGFTYMVDSQTAGKVARTSCGGTWVITPNAVAGKESVHFLGNTAPDDGRHAAAAPTRNR
Ga0170824_12643846323300031231Forest SoilMKRTMTIALAVALLGLPMVARADDGQAVARSAGSAFGTLVYTPVKTSFCILGAIGGGFTYMVDSKTGAKVARGACGGTWVITPSAVGGNEPVHFVG
Ga0307472_10054608323300032205Hardwood Forest SoilMKRMITIALVVALLGLPMPARGDDGKEVAQTAGSVFGTLVYAPVKASFCILGAIGSGFTYMADSKTAGKVARASCGGTWVITPNTVAGKESVHFVGNTAPSGQDRTHVAGAPPARK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.