NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F091699

Metagenome Family F091699

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091699
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 68 residues
Representative Sequence MRRELQLSVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGVIRCERCAKKSAASSEDENEDGERIEGYGAIP
Number of Associated Samples 89
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.91 %
% of genes near scaffold ends (potentially truncated) 28.97 %
% of genes from short scaffolds (< 2000 bps) 78.50 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.458 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.953 % of family members)
Environment Ontology (ENVO) Unclassified
(22.430 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.056 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.20%    β-sheet: 13.27%    Coil/Unstructured: 76.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00970FAD_binding_6 29.91
PF02780Transketolase_C 28.04
PF10418DHODB_Fe-S_bind 9.35
PF02445NadA 2.80
PF03352Adenine_glyco 2.80
PF00215OMPdecase 1.87
PF01180DHO_dh 1.87
PF13191AAA_16 0.93
PF00171Aldedh 0.93
PF04820Trp_halogenase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0379Quinolinate synthaseCoenzyme transport and metabolism [H] 2.80
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 2.80
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.87
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 1.87
COG0167Dihydroorotate dehydrogenaseNucleotide transport and metabolism [F] 1.87
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 1.87
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 1.87
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.93
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.93
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.46 %
UnclassifiedrootN/A6.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003371|JGI26145J50221_1012912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300004156|Ga0062589_101220759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300004156|Ga0062589_102874914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300004480|Ga0062592_100351522Not Available1146Open in IMG/M
3300005178|Ga0066688_10205337All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300005187|Ga0066675_10033513All Organisms → cellular organisms → Bacteria3037Open in IMG/M
3300005294|Ga0065705_10487557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium790Open in IMG/M
3300005343|Ga0070687_101177480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300005444|Ga0070694_100066663All Organisms → cellular organisms → Bacteria2470Open in IMG/M
3300005445|Ga0070708_100031049All Organisms → cellular organisms → Bacteria4621Open in IMG/M
3300005446|Ga0066686_10257123All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300005457|Ga0070662_100861223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300005467|Ga0070706_100047650All Organisms → cellular organisms → Bacteria3955Open in IMG/M
3300005468|Ga0070707_101489565All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300005471|Ga0070698_101047720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300005843|Ga0068860_101418618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium716Open in IMG/M
3300006796|Ga0066665_10613843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium872Open in IMG/M
3300006852|Ga0075433_10105613All Organisms → cellular organisms → Bacteria2495Open in IMG/M
3300006852|Ga0075433_10743815All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300006852|Ga0075433_10975220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium739Open in IMG/M
3300006871|Ga0075434_102384481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300006876|Ga0079217_10000920All Organisms → cellular organisms → Bacteria → Proteobacteria7727Open in IMG/M
3300006894|Ga0079215_10100025All Organisms → cellular organisms → Bacteria → Acidobacteria1274Open in IMG/M
3300006904|Ga0075424_100999363All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300009012|Ga0066710_101737826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium947Open in IMG/M
3300009012|Ga0066710_104306700All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300009012|Ga0066710_104306702All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300009090|Ga0099827_11857898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300009147|Ga0114129_10027221All Organisms → cellular organisms → Bacteria8095Open in IMG/M
3300009147|Ga0114129_12374472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300009157|Ga0105092_10352021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium835Open in IMG/M
3300009162|Ga0075423_10001616All Organisms → cellular organisms → Bacteria20028Open in IMG/M
3300009162|Ga0075423_11293441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300010400|Ga0134122_11570460All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300012204|Ga0137374_10081039All Organisms → cellular organisms → Bacteria3143Open in IMG/M
3300012207|Ga0137381_11631855All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300012211|Ga0137377_10645460All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium994Open in IMG/M
3300012350|Ga0137372_10000122All Organisms → cellular organisms → Bacteria58167Open in IMG/M
3300012353|Ga0137367_10283413Not Available1188Open in IMG/M
3300012353|Ga0137367_10852974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300012355|Ga0137369_11150821All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300012358|Ga0137368_10206342Not Available1393Open in IMG/M
3300012360|Ga0137375_10298323Not Available1459Open in IMG/M
3300012532|Ga0137373_10229875All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1508Open in IMG/M
3300012951|Ga0164300_10066497All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1482Open in IMG/M
3300012955|Ga0164298_11188366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300012957|Ga0164303_10116468All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300012958|Ga0164299_10304983All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300012961|Ga0164302_11276992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300012976|Ga0134076_10290479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300014877|Ga0180074_1018584All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300014882|Ga0180069_1167055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300017659|Ga0134083_10450206All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300017997|Ga0184610_1057158All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300017997|Ga0184610_1212594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300018028|Ga0184608_10130774All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1071Open in IMG/M
3300018052|Ga0184638_1011007All Organisms → cellular organisms → Bacteria3060Open in IMG/M
3300018053|Ga0184626_10277262All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300018054|Ga0184621_10046980All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300018055|Ga0184616_10198936Not Available752Open in IMG/M
3300018056|Ga0184623_10016493All Organisms → cellular organisms → Bacteria3246Open in IMG/M
3300018056|Ga0184623_10451701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300018059|Ga0184615_10008491All Organisms → cellular organisms → Bacteria5569Open in IMG/M
3300018059|Ga0184615_10271361All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium949Open in IMG/M
3300018063|Ga0184637_10466859All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300018068|Ga0184636_1282644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300018077|Ga0184633_10012802All Organisms → cellular organisms → Bacteria4034Open in IMG/M
3300018079|Ga0184627_10646807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300018082|Ga0184639_10085889All Organisms → cellular organisms → Bacteria1656Open in IMG/M
3300018422|Ga0190265_10262290All Organisms → cellular organisms → Bacteria1781Open in IMG/M
3300018433|Ga0066667_10457885All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300018920|Ga0190273_11786235All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300018920|Ga0190273_12307343All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300020009|Ga0193740_1029580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300020009|Ga0193740_1059208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300021090|Ga0210377_10024864All Organisms → cellular organisms → Bacteria4341Open in IMG/M
3300025315|Ga0207697_10256783All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium773Open in IMG/M
3300025324|Ga0209640_10004312All Organisms → cellular organisms → Bacteria12497Open in IMG/M
3300025324|Ga0209640_11370355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300025910|Ga0207684_10021390All Organisms → cellular organisms → Bacteria → Proteobacteria5522Open in IMG/M
3300025922|Ga0207646_10033411All Organisms → cellular organisms → Bacteria4654Open in IMG/M
3300025922|Ga0207646_10338110All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300025940|Ga0207691_10253790Not Available1517Open in IMG/M
3300025986|Ga0207658_11679719All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300026089|Ga0207648_10618708All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300026331|Ga0209267_1083850All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300026532|Ga0209160_1138187All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300026535|Ga0256867_10367553All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300026550|Ga0209474_10394181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium728Open in IMG/M
3300027364|Ga0209967_1013681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1153Open in IMG/M
3300027378|Ga0209981_1006377All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300027614|Ga0209970_1001568All Organisms → cellular organisms → Bacteria3988Open in IMG/M
3300027637|Ga0209818_1001693All Organisms → cellular organisms → Bacteria4353Open in IMG/M
3300027909|Ga0209382_11967060All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300028828|Ga0307312_10996638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300030006|Ga0299907_10768525All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300031716|Ga0310813_11301655All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300031740|Ga0307468_101324871All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031965|Ga0326597_10630989All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300031965|Ga0326597_11361662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300032180|Ga0307471_100210702All Organisms → cellular organisms → Bacteria1956Open in IMG/M
3300032180|Ga0307471_100796357All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300033417|Ga0214471_10044200All Organisms → cellular organisms → Bacteria3626Open in IMG/M
3300033513|Ga0316628_100584016All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300033815|Ga0364946_005100All Organisms → cellular organisms → Bacteria2201Open in IMG/M
3300033815|Ga0364946_064725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment14.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.28%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.35%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.74%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.80%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.87%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003371Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PMHost-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012508Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510Host-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300020009Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1EnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26145J50221_101291223300003371Arabidopsis Thaliana RhizosphereMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESPDDAEREDMGAIDTYGLIT*
Ga0062589_10122075923300004156SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNEEENEDGKRIEGYGAIS*
Ga0062589_10287491423300004156SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGYGVIL*
Ga0062592_10035152223300004480SoilMWRELQLSIETPVNANHRSLRRCHGCGNYERPFVEMEGTIRCERCAKKNETSDEREKESLEGIES
Ga0066688_1020533723300005178SoilMRRQLQLTIEPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASANEGEDENGERIEGYGAIT*
Ga0066675_1003351343300005187SoilMRRQLQLTIEPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASSNEGENEDGERIEGYGAIT*
Ga0065705_1048755713300005294Switchgrass RhizosphereMRRELQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESSEDAEKQDMGAIDTYGLIT*
Ga0070687_10117748023300005343Switchgrass RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGY
Ga0070694_10006666333300005444Corn, Switchgrass And Miscanthus RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNDEENEDGKRIEGYGAIS*
Ga0070708_10003104923300005445Corn, Switchgrass And Miscanthus RhizosphereMRRELQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0066686_1025712323300005446SoilMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKKAGREEDGNDDIETIEAYGRIA*
Ga0070662_10086122313300005457Corn RhizosphereLQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGYGVIL*
Ga0070706_10004765023300005467Corn, Switchgrass And Miscanthus RhizosphereMRRELQLQLSVEPPVQRNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0070707_10148956513300005468Corn, Switchgrass And Miscanthus RhizosphereVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0070698_10104772013300005471Corn, Switchgrass And Miscanthus RhizosphereMRRQQLQLSVEPPVLPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGENEDGKRIEGYGAIT*
Ga0068860_10141861813300005843Switchgrass RhizosphereAMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNDEENEDGKRIEGYGAIS*
Ga0066665_1061384323300006796SoilMRRQQLQLSVEPPVQSNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0075433_1010561323300006852Populus RhizosphereMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKKSGQSEEDGKDDIESIEAYGRIA*
Ga0075433_1074381513300006852Populus RhizosphereMRRESQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0075433_1097522023300006852Populus RhizosphereMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMEGVIRCEQCAKKDGDSERETEEDIRSVESYGLIS*
Ga0075434_10238448123300006871Populus RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGYGVI
Ga0079217_1000092033300006876Agricultural SoilMWRELQLSIETPVHANHRSLRRCHGCGNYTRPFVEMEGAIRCERCAKKNDGTDEPEKESLEGIESYGTIA*
Ga0079215_1010002523300006894Agricultural SoilMWRELQLSIETPVHANHRSLRRCHGCGNYTRPFVEMEGTIRCERCAKKDESADERERESLGAIDSYGTIS*
Ga0075424_10099936313300006904Populus RhizosphereMRRESQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDG
Ga0066710_10173782623300009012Grasslands SoilMRRQQLPLSVEPPVQSNHRTLRRCHGSGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT
Ga0066710_10430670013300009012Grasslands SoilPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASANAGEDENGERIEGYGAIT
Ga0066710_10430670213300009012Grasslands SoilPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASSNEGENEDGERIEGYGAIT
Ga0099827_1185789813300009090Vadose Zone SoilMRRELQLTIEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEAEDGERIEGYGAIT*
Ga0114129_1002722113300009147Populus RhizosphereMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMEGVIRCEQCAKKSGQSEEDGKDDIESIEAYGRIA*
Ga0114129_1237447213300009147Populus RhizosphereMWRELQLSIETPVNANHRSLRRCHGCGNYERPFVEMDGTIRCERCAKKNETADEREKESLDGI
Ga0105092_1035202123300009157Freshwater SedimentMWRELQLSIETPVNANHRSLRRCHGCGNYTRPFVEMEGAIRCERCAKKNEGTDDRERESLEGIENYGTIA*
Ga0075423_10001616233300009162Populus RhizosphereMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKKSGQSEEDGKDDIDSIEAYGRIA*
Ga0075423_1129344123300009162Populus RhizosphereEPPVQANHRSLRRCYGCGNYTRPFVEMEGVIRCEQCAKKDGDSERETEEDIRSVESYGLIS*
Ga0134122_1157046013300010400Terrestrial SoilEAMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNDEENEDGKRIEGYGAIS*
Ga0137374_1008103953300012204Vadose Zone SoilMRRELQLSVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGVIRCERCAKKSAASSEDENEDGERIEGYGAIP*
Ga0137381_1163185523300012207Vadose Zone SoilMRRQQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0137377_1064546023300012211Vadose Zone SoilMRRQQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGE
Ga0137372_10000122313300012350Vadose Zone SoilMQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSESEDEDGERIEGYGAIT*
Ga0137367_1028341313300012353Vadose Zone SoilMRRELQLCVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGVIRCERCAKKSAASSEDENEDGER
Ga0137367_1085297423300012353Vadose Zone SoilEPPVQPNHRSLRRCYGCGNYTRPFVEMDGIIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0137369_1115082113300012355Vadose Zone SoilMRRELQLTIEAPVPANHRSLRRCHGCGNYTRPCVEIDGVVRCEKCAKKSAGSREEEEEDEDGKRI
Ga0137368_1020634213300012358Vadose Zone SoilMRRELQLSVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGVIRCEKCAKKNGNSEADGDKDTARIEAYGVIT*
Ga0137375_1029832323300012360Vadose Zone SoilMRRELQLSVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGVIRCERCAKKSAASSEDENEDRERIEGYGAIP*
Ga0157315_107689113300012508Arabidopsis RhizosphereANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGYGVIL*
Ga0137373_1022987523300012532Vadose Zone SoilMRRQLQQLQLSVEPPVQPNHRSLRRCYGCGNYTRPFVEMDGIIRCERCAKKSATSNEGEDEDGERIEGYGAIT*
Ga0164300_1006649733300012951SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASSNEGREDEDSERIDRYGVIL*
Ga0164298_1118836623300012955SoilMRRELQLTIEAPVQANHRSLRRCHGCGNYERPFVEMDGVIRCEKCAKKSTSPNEEENEDGKRIEGYGAIS*
Ga0164303_1011646823300012957SoilMRRELQLTIEAPVQANHRSLRRCHGCGNYERPFVEMDGVIRCEKCAKKSASSNEGREDEDSERIDGYGVIL*
Ga0164299_1030498323300012958SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASSNEGREDEDSERIDGYGVIL*
Ga0164302_1127699223300012961SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSTSPNDEENEDGKRIEGYGAIS*
Ga0134076_1029047923300012976Grasslands SoilMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKKAGREEDGSDDIETIEAYGQIA*
Ga0180074_101858423300014877SoilMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESSEDAEKQDMGAIDTYGLIT*
Ga0180069_116705523300014882SoilQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESPEDAEREDMGAIDTYGLIT*
Ga0134083_1045020613300017659Grasslands SoilMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKKAGREEDGNDDIETIEAYGRIA
Ga0184610_105715813300017997Groundwater SedimentRRELQLSVEPPGQANHRSLRRCYGCGNYTRPFVEMDGIIRCEECARKSAGTGEGEDENGERVEGYGAIL
Ga0184610_121259423300017997Groundwater SedimentLTIEAPVPANHRSLRRCHGCGNYTRPCIEIDGVIRCEKCAKKSAGSSEGEDENGERIEGYGAIL
Ga0184608_1013077423300018028Groundwater SedimentMRRELQLTIEAPVPANNRSLRRCHGCGNYTRPCVETDGVIHCERCAKRSDSSREEEDEDGKRIEGYGAIL
Ga0184638_101100723300018052Groundwater SedimentMRRESQLSVEPPGQVNHRSLRRCYGCGNYTRPFVEMDGIIRCEKCAKKSAGSNVGEDENGERIEGYGAIL
Ga0184626_1027726213300018053Groundwater SedimentMRRELQLSVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCERCAKKSAGSSEGDEENVERIEGYGAIA
Ga0184621_1004698023300018054Groundwater SedimentMRRELQLTIEAPVPANNRSLRRCHGCGNYTRPCVETDGVIHCERCAKRSAGSREEEDEDGKRIEGYGAIL
Ga0184616_1019893613300018055Groundwater SedimentMRRELQLSVEPPVLANHRSLRRCYGCGNYTRPFVEMDGNIRCERCAKKSAGSSEGEDENG
Ga0184623_1001649323300018056Groundwater SedimentMRRELQLSVEPPGQANPRSLRRCYGCGNYTRPFVEMDGIIRCEECARKSAGTGEGEDENGERVEGYGAIL
Ga0184623_1045170123300018056Groundwater SedimentMRRELQLTIEAPVPANHRSLRRCHGCGNYTRPCIEIDGVIRCEKCAKKSAGSSEGEDEDGKRIEGYGAIL
Ga0184615_1000849133300018059Groundwater SedimentMRRELQLSVEPPVLANHRSLRRCYGCGNYTRPFVEMDGNIRCERCAKKSAGSSEGEDENGERIEGYGAIL
Ga0184615_1027136113300018059Groundwater SedimentRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESSEDAEKQDMGAIDTYGLIT
Ga0184637_1046685923300018063Groundwater SedimentMRRELQLSVEPPVQTNYRSLRRCYGCGNYTRPFVEMDGVVRCERCAKKSAGSSQGDEEDA
Ga0184636_128264423300018068Groundwater SedimentLSVEPPVLANHRSLRRCYGCGNYTRPFVEMDGNIRCERCAKKSAGSSEGEDENGERIEGYGAIL
Ga0184633_1001280223300018077Groundwater SedimentMWRELQLSVETPVHANHRSLRRCHGCGNYTRPFVEMEGTIRCERCAKKDENTDDREKESLNGIESYGTIA
Ga0184627_1064680723300018079Groundwater SedimentMWRELQLSVETPVHANHRSLRRCHGCGNYTRPFVEMEGTIRCERCAKKDESTDDREKE
Ga0184639_1008588923300018082Groundwater SedimentMWRELQLSVETPVHANHRSLRRCHGCGNYTRPFVEMEGTIRCERCAKKDESTDDREKESLNGIESYGTIA
Ga0190265_1026229023300018422SoilMWRELQLSIETPVNANHRSLRRCHGCGNYTRPFVEMEGTIRCERCAKKNEGADDREKESLEGIESYGTIA
Ga0066667_1045788523300018433Grasslands SoilMRRQLQLTIEPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASSNEGENEDGERIEGYGAIT
Ga0190273_1178623523300018920SoilPVPANNRSLRRCHGCGNYTRPCVETDGVIHCERCAKRSAGSREEEDEDGKRIEGYGAIL
Ga0190273_1230734323300018920SoilMRRELQLTIEAPVTGNHRSLRRCHSCGNYTRPFAEMDGIIRCEKCAKKSASSSDEENEDGKRIEGYGAIC
Ga0193740_102958023300020009SoilMRRELQLSIEAPVPANHRSLRRCHGCGNYTRPCVEMDGIIRCKKCAKKSAGPRDGEDENDERIEGYGAIL
Ga0193740_105920823300020009SoilMWRELQLSIETPVHANHRSLRRCHGCGNYTRPFVEMEGAIRCERCAKKDESTDEREKESLDGIEFYGTIS
Ga0210377_1002486423300021090Groundwater SedimentMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESSEDAEKQDMGAIDTYGLIT
Ga0207697_1025678313300025315Corn, Switchgrass And Miscanthus RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDGYGVIL
Ga0209640_10004312163300025324SoilMWRELQLSIETPVNANHRSLRRCHGCGNYTRPFVEMEGTIRCEKCAKKGESSDEREKESLDGIESYGAIE
Ga0209640_1137035523300025324SoilMRRELQLQLTVEPPVQANHRSLRRCFSCGNYTRPFVEMDGVIRCERCAKRSGDSEAEGDKDNGRVEAYGRIA
Ga0207684_1002139043300025910Corn, Switchgrass And Miscanthus RhizosphereMRRELQLQLSVEPPVQRNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT
Ga0207646_1003341123300025922Corn, Switchgrass And Miscanthus RhizosphereMRRELQLQLSVEPPVPPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGENEDGERIEGYGAIT
Ga0207646_1033811023300025922Corn, Switchgrass And Miscanthus RhizosphereMRRELQLQLSVEPPVQPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT
Ga0207691_1025379013300025940Miscanthus RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNEEE
Ga0207658_1167971923300025986Switchgrass RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDEDSERIDG
Ga0207648_1061870823300026089Miscanthus RhizosphereMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNDEENEDGKRIEGYGAIS
Ga0209267_108385023300026331SoilMRRQLQLTIEPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASANEGEDENGERIEGYGAIT
Ga0209160_113818723300026532SoilMRRQQLQLSVEPPVQSNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGEDEDGERIEGYGAIT
Ga0256867_1036755323300026535SoilMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKRKGDSEADGENDTERIEAYGVIA
Ga0209474_1039418123300026550SoilSEKAMRRQLQLTIEPPVQPIHRSMRRCHGCGNYARPFVEAEGVIRCERCAKKSASSNEGENEDGERIEGYGAIT
Ga0209967_101368123300027364Arabidopsis Thaliana RhizosphereMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESPDDAEREDMRAIDTYGLIT
Ga0209981_100637723300027378Arabidopsis Thaliana RhizosphereMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESPDDAEKQDMGAIDTYGLIT
Ga0209970_100156813300027614Arabidopsis Thaliana RhizosphereMRRELQLQLVVEPVHANHRALRRCHGCGNYERPFVEMDGVIRCERCAKKTESPDDAEREDMGAIDTYGLIT
Ga0209818_100169353300027637Agricultural SoilMWRELQLSIETPVHANHRSLRRCHGCGNYTRPFVEMEGAIRCERCAKKNDGTDEPEKESLEGIESYGTIA
Ga0209382_1196706013300027909Populus RhizosphereMWRELQLSIETPVNANHRSLRRCHGCGNYERPFVEMDGTIRCERCAKKNETADEREKESLDGIESYGKVL
Ga0307312_1099663823300028828SoilMRRELQLTIEAPVPANHRSLRRCHGCGNYTRPCVEMDGVIRCEKCAKKSAGSREEEDEDGKRIEGYGAIQ
Ga0299907_1076852523300030006SoilMRRELQLQLTVEPPVQANHRSLRRCYGCGNYTRPFVEMDGVIRCEQCAKRKGDSEADGENDTERIEAYGVIGVTADSGCG
Ga0310813_1130165513300031716SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASANEGREDED
Ga0307468_10132487113300031740Hardwood Forest SoilMRRELQLTIEAPVQANHRSLRRCYGCGNYERPFVEMDGVIRCEKCAKKSASPNDEENE
Ga0326597_1063098913300031965SoilMRRELLLSVEPVKPNHRSLRRCYGCGNYARPFVEMEGVIRCERCAKKSSSSPDGEEEVERIEGYGAIV
Ga0326597_1136166223300031965SoilMRRELQLSVEPVKPNHRSLRRCYGCGNYARPFVEMEGVIRCERCAKKSSSSPDGEDEDVERIEGYGAIV
Ga0307471_10021070233300032180Hardwood Forest SoilMRRQQLQLSVEPPVLPNHRSLRRCHGCGDYARPFVEMDGVIRCERCAKKSATSNEGENEDGERIEGYGAIT
Ga0307471_10079635723300032180Hardwood Forest SoilMRRELQLELTVEPVPASRHRSLRRCHGCGNYERPFVEMEGVIRCEKCAKKDESRENAEKTDMGTIDGYGMIT
Ga0214471_1004420053300033417SoilMRRELLLSVEPVKPSHRSLRRCYGCGNYARPFVEMEGVIRCERCAKKSSSSPDGEEEVERIEGYGAIV
Ga0316628_10058401623300033513SoilMRREFQQLQLTVEPVHANHRALRRCHGCGNYERPFVEMDGIIRCERCAKKGEEDDESEKKDLGSVGEFGRIL
Ga0364946_005100_1832_20443300033815SedimentMRRELQLSVEPPVQAIHRSLRRCYGCGNYTRPFVEMDGVVRCERCAKKSAGSSEGDEGDVERIEGHGAIA
Ga0364946_064725_109_3213300033815SedimentMRRELQLSVEPPGQANHRSLRRCYGCGNYTRPFVEMDGIIRCEKCAKKSAGSREGENDDGERTEGYGAIL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.