NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091659

Metagenome Family F091659

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091659
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 82 residues
Representative Sequence GSSYEWNADLNGHRIDETRTDSAFLLLKQGDFSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDGSD
Number of Associated Samples 91
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.89 %
% of genes near scaffold ends (potentially truncated) 89.72 %
% of genes from short scaffolds (< 2000 bps) 96.26 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.327 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.888 % of family members)
Environment Ontology (ENVO) Unclassified
(40.187 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.794 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.51%    β-sheet: 14.91%    Coil/Unstructured: 81.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF02687FtsX 1.89
PF13847Methyltransf_31 0.94
PF03795YCII 0.94
PF00162PGK 0.94
PF05977MFS_3 0.94
PF00903Glyoxalase 0.94
PF12029DUF3516 0.94
PF01522Polysacc_deac_1 0.94
PF02371Transposase_20 0.94
PF08450SGL 0.94
PF03629SASA 0.94
PF12706Lactamase_B_2 0.94
PF01554MatE 0.94
PF06580His_kinase 0.94
PF04909Amidohydro_2 0.94
PF13633Obsolete Pfam Family 0.94
PF00303Thymidylat_synt 0.94
PF02082Rrf2 0.94
PF02738MoCoBD_1 0.94
PF01139RtcB 0.94
PF07963N_methyl 0.94
PF00326Peptidase_S9 0.94
PF01370Epimerase 0.94
PF01380SIS 0.94
PF07366SnoaL 0.94
PF12833HTH_18 0.94
PF01844HNH 0.94
PF04002RadC 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG01263-phosphoglycerate kinaseCarbohydrate transport and metabolism [G] 0.94
COG0207Thymidylate synthaseNucleotide transport and metabolism [F] 0.94
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 0.94
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.94
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 0.94
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.94
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 0.94
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 0.94
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 0.94
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 0.94
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 0.94
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.94
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 0.94
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 0.94
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.94
COG2972Sensor histidine kinase YesMSignal transduction mechanisms [T] 0.94
COG3275Sensor histidine kinase, LytS/YehU familySignal transduction mechanisms [T] 0.94
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.94
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.94
COG3547TransposaseMobilome: prophages, transposons [X] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.33 %
UnclassifiedrootN/A4.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_101439074All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300000955|JGI1027J12803_103593927All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales634Open in IMG/M
3300001213|JGIcombinedJ13530_103370934All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales530Open in IMG/M
3300001213|JGIcombinedJ13530_106751302Not Available720Open in IMG/M
3300001686|C688J18823_10732334All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales629Open in IMG/M
3300003541|JGI20214J51650_10872882All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales628Open in IMG/M
3300004114|Ga0062593_100969102All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300004463|Ga0063356_102261223All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales829Open in IMG/M
3300005093|Ga0062594_102862847All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales537Open in IMG/M
3300005263|Ga0071346_1227656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales545Open in IMG/M
3300005332|Ga0066388_101840598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1078Open in IMG/M
3300005344|Ga0070661_100133697All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1865Open in IMG/M
3300005451|Ga0066681_10672042All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales633Open in IMG/M
3300005544|Ga0070686_100574693All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales885Open in IMG/M
3300005549|Ga0070704_101510658All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales618Open in IMG/M
3300005549|Ga0070704_102031151All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales534Open in IMG/M
3300005615|Ga0070702_100359805All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1028Open in IMG/M
3300005616|Ga0068852_102011631Not Available600Open in IMG/M
3300005660|Ga0073904_10275737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales961Open in IMG/M
3300005842|Ga0068858_102045885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales566Open in IMG/M
3300005842|Ga0068858_102147486All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales552Open in IMG/M
3300005844|Ga0068862_100225847All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1697Open in IMG/M
3300006797|Ga0066659_11538388All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales558Open in IMG/M
3300006914|Ga0075436_100084628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2201Open in IMG/M
3300006918|Ga0079216_10420309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium848Open in IMG/M
3300006918|Ga0079216_11619035Not Available548Open in IMG/M
3300007004|Ga0079218_11622798All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium710Open in IMG/M
3300007004|Ga0079218_12096995All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales651Open in IMG/M
3300009012|Ga0066710_100458572All Organisms → cellular organisms → Bacteria1913Open in IMG/M
3300009012|Ga0066710_102751933All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales698Open in IMG/M
3300009089|Ga0099828_11856973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales529Open in IMG/M
3300009137|Ga0066709_102457841All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales705Open in IMG/M
3300009155|Ga0114968_10067779All Organisms → cellular organisms → Bacteria → PVC group2246Open in IMG/M
3300009167|Ga0113563_11837412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales721Open in IMG/M
3300009168|Ga0105104_10797656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales548Open in IMG/M
3300009506|Ga0118657_11978038All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales674Open in IMG/M
3300009551|Ga0105238_11483113All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300009553|Ga0105249_11342317All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium787Open in IMG/M
3300010046|Ga0126384_10698203All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales899Open in IMG/M
3300010046|Ga0126384_11238215All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales690Open in IMG/M
3300010048|Ga0126373_11563335All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales724Open in IMG/M
3300010334|Ga0136644_10803773All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales506Open in IMG/M
3300010361|Ga0126378_12848446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales552Open in IMG/M
3300010397|Ga0134124_11572675All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales687Open in IMG/M
3300010403|Ga0134123_13215060All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales526Open in IMG/M
3300011421|Ga0137462_1148013All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales575Open in IMG/M
3300012202|Ga0137363_11823809All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales501Open in IMG/M
3300012203|Ga0137399_10326618All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300012203|Ga0137399_11118342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales663Open in IMG/M
3300012205|Ga0137362_10539205All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1008Open in IMG/M
3300012205|Ga0137362_11631113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales532Open in IMG/M
3300012206|Ga0137380_11111407All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales673Open in IMG/M
3300012209|Ga0137379_11112409All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales696Open in IMG/M
3300012212|Ga0150985_117905092All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales768Open in IMG/M
3300012351|Ga0137386_11121120All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales554Open in IMG/M
3300012354|Ga0137366_10525403All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales853Open in IMG/M
3300012357|Ga0137384_10375750All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300012532|Ga0137373_11217499All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales530Open in IMG/M
3300012685|Ga0137397_10496721All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales909Open in IMG/M
3300012902|Ga0157291_10345742All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales532Open in IMG/M
3300012927|Ga0137416_11261113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales667Open in IMG/M
3300012929|Ga0137404_10445843All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1148Open in IMG/M
3300012929|Ga0137404_10670718All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales936Open in IMG/M
3300012944|Ga0137410_10321526All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1230Open in IMG/M
3300012948|Ga0126375_11213610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales628Open in IMG/M
3300012971|Ga0126369_11580712All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales745Open in IMG/M
3300012971|Ga0126369_12767460All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales574Open in IMG/M
3300012985|Ga0164308_11912537All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales553Open in IMG/M
3300013105|Ga0157369_12276364All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales549Open in IMG/M
3300013296|Ga0157374_10815359All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium949Open in IMG/M
3300013296|Ga0157374_10818437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales947Open in IMG/M
3300013297|Ga0157378_11632659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium691Open in IMG/M
3300013306|Ga0163162_10074942All Organisms → cellular organisms → Bacteria3444Open in IMG/M
3300013308|Ga0157375_12696136All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales594Open in IMG/M
3300014497|Ga0182008_10401742All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales736Open in IMG/M
3300014884|Ga0180104_1273244All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium502Open in IMG/M
3300014969|Ga0157376_12781445All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales529Open in IMG/M
3300015077|Ga0173483_10493228All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales651Open in IMG/M
3300015374|Ga0132255_105923836All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales517Open in IMG/M
3300018431|Ga0066655_11413338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales506Open in IMG/M
3300018433|Ga0066667_11291433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales637Open in IMG/M
3300018476|Ga0190274_11630391All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales738Open in IMG/M
3300024323|Ga0247666_1040481All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales957Open in IMG/M
3300025913|Ga0207695_11540079All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales545Open in IMG/M
3300025922|Ga0207646_11296439All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales636Open in IMG/M
3300025922|Ga0207646_11296439All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales636Open in IMG/M
3300025924|Ga0207694_10971958All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300025941|Ga0207711_11714171All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales572Open in IMG/M
3300025961|Ga0207712_11157153All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales689Open in IMG/M
3300026035|Ga0207703_11643834All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales618Open in IMG/M
3300027821|Ga0209811_10131124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales919Open in IMG/M
3300028654|Ga0265322_10072894All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales974Open in IMG/M
3300030339|Ga0311360_11137810All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales615Open in IMG/M
3300031057|Ga0170834_113795945All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales639Open in IMG/M
3300031231|Ga0170824_104808827All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales501Open in IMG/M
3300031474|Ga0170818_105834147All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium622Open in IMG/M
3300031474|Ga0170818_106060627All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales631Open in IMG/M
3300031547|Ga0310887_10859065All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300031573|Ga0310915_10390605All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales988Open in IMG/M
3300032004|Ga0307414_11707711All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales587Open in IMG/M
3300032205|Ga0307472_100455642All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1089Open in IMG/M
3300032261|Ga0306920_101408559All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales999Open in IMG/M
3300032397|Ga0315287_12767862All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales520Open in IMG/M
3300032892|Ga0335081_11007421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales970Open in IMG/M
3300033233|Ga0334722_10715742All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales711Open in IMG/M
3300033557|Ga0316617_102001821Not Available595Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.74%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland2.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.80%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.87%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.87%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
Anaerobic Enrichment CultureEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture0.93%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.93%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005263Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005660Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitateEngineeredOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011421Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028654Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaGHost-AssociatedOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10143907423300000955SoilSSYEWNTDLNGRRIDETRTDSAFLLLRRGDPSGGITNFVLTFPPGTTPLLLDYDGFHPRPPKPGKNVVFMDGHIAPLEATRD*
JGI1027J12803_10359392713300000955SoilFAAEGSSYEWNAELNGHRIDETRTDSAFLLLQKGNPSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKSGKNVAFMDGHVATLQATRD*
JGIcombinedJ13530_10337093413300001213WetlandAEGSSYEWNADLNGHRMDETRTDTAFLLLKKGDFSGGITNFVMTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEGARDDLE*
JGIcombinedJ13530_10675130213300001213WetlandIDETRTDSAFLLLEPGDWSGGITNFVLTFPPGTTPLLLDYDDFHPRPPKSGKNVAFMDGHVAPLEASGDSSRAGEE*
C688J18823_1073233413300001686SoilKSRFAAEGSSYEWNAELNGHRMDETRTDSAFLLLKQGDPSGGITNFYLTLPPGTTPLFLDYDEFHPRPPRPGKNVVFMDGHVAPLEATREAAD*
JGI20214J51650_1087288213300003541WetlandLLLQKGNPSAGITNFVLTFPPGTTPLFLDYDGFHSRPPKSGKNVVFMDGHVAPLEATRDDSE*
Ga0062593_10096910223300004114SoilGSSYEWNAELNGHRIDQTRSDSAFLLLEPGNPAGGITNFVLIFPPERTPLFLDYDDFHRRPPKSGKNVVFMDGHVAPMEAPHE*
Ga0063356_10226122313300004463Arabidopsis Thaliana RhizosphereRIDVTRTDSAFLLLRQGDWSGGVTNFVQTFPPGTTPLLLDYDEFHPRPPRPGKNVAFMDGHVAPLEAIRDDSE*
Ga0062594_10286284713300005093SoilSSYEWNAELNGHRIDETQTDTAFLLLKRGDPSGGITNFFQTFPPGKTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEGARD*
Ga0071346_122765623300005263Anaerobic Enrichment CultureVSXPSDKKGRFAAQGSSYEWNADLNGHRLDETRTDTAFLLLKQGDLSGGITNFVLTLPPGTTPLLLDYDEFHRRPPKPGKNVVFMDGHVAPLEANR
Ga0066388_10184059823300005332Tropical Forest SoilPVDKMGRFTAEGSSYEWNTDLNGHRIDETRTDSAFLLLKKGDPSAGITNFFLTFPPGTTPLLLDYEEFHPRPPKSGKNVAFMDGHVAPLKAGSD*
Ga0070661_10013369723300005344Corn RhizosphereIDETRTDTAFLLLKQGDLSGGITNFVLTLPPGTTPLLLDYDEFHPRSPKSGKNVVFMDGHVTPMEAASN*
Ga0066681_1067204213300005451SoilFAAEGSSYEWNADVNGHRIDETRTDSAFLLLRQGDWSGGITNFVLTFPPGTTPLLLDYDQFHPRPPKPGKNVVFMDGHVAPLEATRDDSD*
Ga0070686_10057469323300005544Switchgrass RhizosphereAEGSSYEWNADLNGHRIDETRTDSAFLLLKRGDASGGITNFALTFPPGTTPLFLDYDGYHTRPPKSGKNVVFMDGHVAPLAATREVSD*
Ga0070704_10151065823300005549Corn, Switchgrass And Miscanthus RhizosphereEGSSYEWNYDLNGHRIDETRTDSAFLLLKQGDISGGITNFVLTFPPGTTPLLLDYEEFHPRPPKPGKNVVFMDGHVAPLKATRDASD*
Ga0070704_10203115113300005549Corn, Switchgrass And Miscanthus RhizosphereNTNSATVFKCPADKMGRFAAEGSSYEWNADLNGYRIDETRTESAFLLLQKGNPSGGITNFALTFPPGTTPLFLDYDGYHTRPPKSGKNVVFMDGHVAPLAATREVSD*
Ga0070702_10035980513300005615Corn, Switchgrass And Miscanthus RhizosphereNSATVFKCPVDKKGRFAAEGSSYEWNADLNGHRIDETRTDSAFLLLKRGDASGGITNFALTFPPGTTPLFLDYDGYHTRPPKSGKNVVFMDGHVAPLAATREVSD*
Ga0068852_10201163113300005616Corn RhizosphereIDETRTDSAFLLLKKGDLSGGITNFVLSLPPGTTPLLLDYDPFHPRPSKPGKNVVFMDGHVAPLEPTRDASD*
Ga0073904_1027573713300005660Activated SludgePADQKGRFAAEGSSYEWNTDLNGHRMDETRTDGAFLLLKPGDWSGGITNFVQTFPPEKTPLLLDYEEVHPRPPKSGKNVVFMDGHVAPLEAAR*
Ga0068858_10204588513300005842Switchgrass RhizosphereDKKGRFAAEGSSYEWNTDLNGQRMDQTRTDSAFLLLKPGDPSGGITNFFLALPPATTPLFLDYDEFHAPRPKSGKNVAFMDGHVAPLEAARDDSE*
Ga0068858_10214748613300005842Switchgrass RhizosphereETQTDTAFLLLKRGDPSGGITNFFQTFPPGKTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEGARD*
Ga0068862_10022584733300005844Switchgrass RhizosphereIDETRTDSAFLLLKQGDPSAGITNFVLTFPPGTTPLLLDYDEFHPRPPKSGKNVVFMDGHVAPLEATRDASD*
Ga0066659_1153838813300006797SoilNGHRIDETRTDSAFLLLKQGDWSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKSGKNVAFMDGHVATLEATRDASE*
Ga0075436_10008462843300006914Populus RhizosphereFAAEGSSYEWNADLNAQRIDETRTDSAFLLLKQGDFSGGITNFYLTFPPGATPLLLDYDDFHPRPPKPGKNVVFMDGHVAPLEANRGDSN*
Ga0079216_1042030923300006918Agricultural SoilDHAFLLLKPGDPSGGITNFFLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPMEATRDASE*
Ga0079216_1161903513300006918Agricultural SoilTRTDHAFLLLKPGDPSGGITNFFLAHPPETTPLFLDYDEVHPRPPKPGKNVVFMDGHVSAMEAARDASN*
Ga0079218_1162279823300007004Agricultural SoilLLKPGDPSGGVTNFFLTLPPGTTPLMLDYDGFHPRPPKPGKNVVFMDGHVAALEAGREATQ*
Ga0079218_1209699513300007004Agricultural SoilGRRMDETRNDSAFLLLKPGDPSGGITNFFLTLPPETTPLLLDYDEFHLRPRKPGKNVVFMDGHVAALEAARD*
Ga0066710_10045857233300009012Grasslands SoilAFLLLRQGDWSGGITNFFLTFPPGTTPLFLDYEEFHPRPPKPGKNVVFMDGHVAPLEATRDDSD
Ga0066710_10275193323300009012Grasslands SoilAEGSSYEWNADLNGHRIDETRTDTAFLLLQQGNPSGGITNFFLTFPPETTPLLLDYDDFHPRPPKPGKNVAFMDGHVAAMEASS
Ga0099828_1185697323300009089Vadose Zone SoilNADLNGHRIDETRTESAFLLLQQGNLSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEASGDDSREGEQ*
Ga0066709_10245784133300009137Grasslands SoilRIDETRTDSAFLLLRQGDWSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDASD*
Ga0114968_1006777943300009155Freshwater LakeLLLERGNPAAGITNFVVTLPPGTTPFLLDYEAVHPRPVNFGKNVVFMDGHVASMDSARNTSQ*
Ga0113563_1183741223300009167Freshwater WetlandsMGRFAAEGSSYEWNANLNGRRIDDIRTDSAFLLLRRGDPSGGITNFVLTFPPETTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLKATGDDSRAGEK*
Ga0105104_1079765613300009168Freshwater SedimentSAFLLLKPGDFSGGITNFVLTLPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDASD*
Ga0118657_1197803813300009506Mangrove SedimentRIDETRTDSAFLLLKQGDFSGGITNFVLRFPPGATPLLLDYDDFHPRPPKSGKNVVFMDGHATALEATRDDFD*
Ga0105238_1148311323300009551Corn RhizosphereGHRIDETRTDSAFLLLKKGDLSGGVTNFVITLPPGTTPLFLDYDNFHPRPPRPGKNVVFMDGHTAPLEGR*
Ga0105249_1134231723300009553Switchgrass RhizosphereDLNGHRIDETRTDSAFLLLEKGNPSAGITNFVVTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVTPLEATRDGSD*
Ga0126384_1069820313300010046Tropical Forest SoilTNTNSATVFKCPVDKMGRFAAEGSSYEWNAELNGHRMDETRTDSAFLLLRKGDWSGGVTNFVLTFPPGKTPLLLDYDEFHPRAPKSGKNVAFMDGHVAPMEATHEDPK*
Ga0126384_1123821513300010046Tropical Forest SoilEGSSYEWNAELNGHRIDETRTDSAFLLLQPGNLSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKSGKNVVFMDGHVAPLEATGDDSHAGEE*
Ga0126373_1156333523300010048Tropical Forest SoilDKMGRFAAEGSSYEWNAELNGHRIDETRTDSAFLLLQKGNPAGGITNFLMTFPPGTTPLFLDYDEFHPRPPKPGKNVAFMDGHVSALEATRDGSN*
Ga0136644_1080377323300010334Freshwater LakeGRFATEGSSYEWNTDLNGSRIDEPRSDSAFLLLEKGNPSGGITNFNVTFPPATIPLLLDYDGFHPRPPKSAKNVVYMDGHVAPL*
Ga0126378_1284844613300010361Tropical Forest SoilDLNGHRIDETRTDSAFLLLQKGNPSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKSGKNVAFMDGHVAPLEAPRDE*
Ga0134124_1144970213300010397Terrestrial SoilPGTNTNSASVFKCPVDKMGRFAAEGSSYEWNYDLNGHRIDQTRTDSAFLLLRQGDLSGGITNFVLTFPPGTTPLFLDYDEFHPRPPKSGKNVVFMDGHVAPLEVTRDASN*
Ga0134124_1157267513300010397Terrestrial SoilMDETRTDSAFLLLKQGDWSGGITNFVLTFPPARTPLLLDYDEFHPRPPKSGKNVAFMDGHVATLEATRDE*
Ga0134123_1321506013300010403Terrestrial SoilTRTDSSFLLLERGNPSAGITNFVLTFPPGTTPLFLDYDGFHLRPPKPGKNVVFMDGHVAALKATGGASD*
Ga0137462_114801313300011421SoilVPADKKGRFGAEGSSYEWNHELNGGRIDETRTDSAFLLLKPGDISGGITNFFLRHPPETMPLLLDYDEFHPRPPKSGKNVAFMDGHVA
Ga0137363_1182380913300012202Vadose Zone SoilGSSYEWNADLNGHRIDETRTDSAFLLLKQGDFSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDGSD*
Ga0137399_1032661813300012203Vadose Zone SoilWNADLNGHRIDETRTDSAFLLLRQGDPSGGITNFVLTFPPGTTPLFLDYDEFHPRPPKSGKNVAFMDGHVAPMEATRDASD*
Ga0137399_1111834213300012203Vadose Zone SoilIDETRTESAFLLLQQGNPSGGITNFFLTFPPGTTPLFLDYEEFHPRPPKSGKNVVFMDGHVARLEATRDASD*
Ga0137362_1053920533300012205Vadose Zone SoilLNGHRIDETRTENAFLLLQQGNPAGGITNFFLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDGSD*
Ga0137362_1163111323300012205Vadose Zone SoilLNGHRIDETRTENAFLLLQQGNPAGGITNFFLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDDSE*
Ga0137380_1111140713300012206Vadose Zone SoilMGRFAAEGSSYEWNADLNGHRIDETRTDSAFLLLERGNPSGGITNFVLTFPPETTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDESE*
Ga0137379_1111240913300012209Vadose Zone SoilDLNGHRIDETRTSSAFLLLQQGNPSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDDSE*
Ga0150985_11790509223300012212Avena Fatua RhizosphereGRFASEGSSYEWNYDLNGHRIDETRTDTAFLLLKQGDLSGGITNFVLTLPPGTTPLFLDYDEFHPRPPRPGKNVVFMDGHVAPLEATREAAD*
Ga0137386_1112112013300012351Vadose Zone SoilSSYEWNFDLNGHRIDETRTDSAFLLLQQGNPSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDDSE*
Ga0137366_1052540323300012354Vadose Zone SoilMGRFAAEGSSYEWNADLNGHRIDETRTDNAFLLLQQGNLSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATGDDSREGEK*
Ga0137384_1037575033300012357Vadose Zone SoilFKCPVDKKARFTAEGSSYEWNFDLNGHRIDETRTDSAFLLLQQGNPSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDASD*
Ga0137373_1121749913300012532Vadose Zone SoilMGRFAAEGSSYEWNADLNGHRIDETRTDNAFLLLQQANLSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFM
Ga0137397_1049672113300012685Vadose Zone SoilGSSYEWNAELNGHRIDETRTDTAFHLLEQGNPSAGITNFFLTFPPETTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPYESH*
Ga0157291_1034574213300012902SoilMGRFATEGSSYEWNYELNGHRMDETRTDSAFLLLKQGDISGGITNFVLTFPPGTTPLLLDYDNFHPRPPKPGKNVVFMDGHVAPLEATRDASD*
Ga0137416_1126111313300012927Vadose Zone SoilMGRFAAEGSSYEWNADLNGHRIDETRTSNAFHLLRQGDFSGGITNFVLTFPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDASD*
Ga0137404_1044584313300012929Vadose Zone SoilLNGHRIDETRTESGFLLLQQGNPSGGITNFFLTFPPGTTPLFLDYDEFHPRPPKSGKNVVFMDGHVAPLEATRDDSE*
Ga0137404_1067071823300012929Vadose Zone SoilVAAEGSSYEWNADLNGHRIDETRTDNAFRLLEQGNLSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDDSE*
Ga0137410_1032152633300012944Vadose Zone SoilTNSNYATVFKCPSDKIGRFAAEGSSYEWNAELNGHRIDETRTDGAFLLLQKGNLSGGTTNFVLTFPPGTTPLFLDYDEFHPRRPKPGKNVVFMDGHVAPLEATRDGSD*
Ga0126375_1121361013300012948Tropical Forest SoilSLLSGGLCLKCPVDKKGRFAAEGSSYEWNYELNGHRIDETRTDSAFLLLKKGDPSGGITNFVMTFPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRD*
Ga0126369_1158071223300012971Tropical Forest SoilGSSYDWNAELNGHRMDETQTDSAFLLLQQGNPSSGITNFVLMFLPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDDVE*
Ga0126369_1276746013300012971Tropical Forest SoilSYEWNAELNGYRMDETRTSSAFLLLKQGDISGGITNFVLTFPPGTTPLFLDYDEFHPRPPKSGKNVAFMDGHVAAMEAIRDE*
Ga0164308_1191253713300012985SoilEWNAELNGHRIDETRTDSAFLLLKQGDFSAGIMNFVLTLPPGTTPLFLDYDDFHPRPPKSGKNVVFMDGHVAPLGANRDTSD*
Ga0157369_1227636423300013105Corn RhizosphereSYEWNAELNGHRIDQTRADSAFLLLKQGDPSGGITNFVITLPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAGLEVSREGAQ*
Ga0157374_1081535913300013296Miscanthus RhizosphereRMDETRTDSAFLLLKQGDPSGGITNFFLTLPPGTTPLFLDYDEDHPRPPKSGKHVVFMDGHVAPL*
Ga0157374_1081843713300013296Miscanthus RhizosphereHRIDQTRSDSAFLLLKQGDPSGGITNFVITLPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAGLEVSREGAQ*
Ga0157378_1163265913300013297Miscanthus RhizosphereFLLLQKGNIAGGITNFVVTIPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAPLEAN*
Ga0163162_1007494253300013306Switchgrass RhizosphereMKPERDSAFLLLKPGDISGGITNFVLTFPPETTPLFLDYDDFHPRPPKPGKNVVFMDGHVTSLEATRETSN*
Ga0157375_1269613613300013308Miscanthus RhizosphereSAFLLLRQGDWSGGVTNFVQTFPPGTTPLLLDYDEFHPRPPRPGKNVAFMDGHVAPLEATRDHSE*
Ga0182008_1040174223300014497RhizosphereGHRIDETRSDSAFFLLHPGDIFGGVTNFVLTLPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAPLEAARD*
Ga0180104_127324423300014884SoilETRTESAFLLLKQGDFSGGVTNFILTLPPRTPPLLLDYDDFHPRPPKPGKNVVFMDGHVAALEATADK*
Ga0157376_1278144523300014969Miscanthus RhizosphereGRFAAEGSSYEWNAELNGHRIDQTRSDSAFLLLKQGDPSGGITNFVITLPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGHVAGLEVSREGGQ*
Ga0173483_1049322813300015077SoilRATVFKCPVDKVGRFAAEGSSYEWNYDLNGHRIDETRTDSAFLLLKPGDLSGGITNFALTFPPGTTPLLLDYDAFHPRPPKPGKNVVFMDGHVAPLEADESQ*
Ga0132255_10592383613300015374Arabidopsis RhizosphereAEGSSYEWNTDLNGHRIDETRTDSAFLLLRRGDPSAGVTNFFLTFPPGKTPLFLDYDEFHAPRAKSGKNVVFMDGHVAPMEAGSD*
Ga0066655_1141333813300018431Grasslands SoilAEGSSYEWNADLNGHRIDETRTESAFLLLQKGNPSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEASRDDSE
Ga0066667_1129143313300018433Grasslands SoilYEWNADLNGHRIDEARTDSAFLLLRLGDWSGGVTNFYLTFPPGKTPLLLDYEDFHPRPPKSGKNVAFMDGHVAPMEATGAAGGGGD
Ga0190274_1163039113300018476SoilNGHRIDETRTDHAFLLLQQGNPSGGITNFFQTFPPEKTPLLLDYEGFHPRPPKPGKNVVFMDGHVAPMEGNRDASE
Ga0247666_104048113300024323SoilTNSATVFKCPVDKTGRFAAQGSSYEWNADLNGHRIDETRTDSAFLLLKQGDWSGGITNFVLTFPPATTPLLLDYDEFHPRPPKSGKNVAFMDGHVAALEASRDASQ
Ga0207695_1154007913300025913Corn RhizosphereSAFLLLKQGDPSGGITNFFLTLPPGTTPLFLDYDEYHPRPPKSGKNVVFMDGHVAPL
Ga0207646_1129643913300025922Corn, Switchgrass And Miscanthus RhizosphereNADLNGHRIDETRTDSAFRLLEKGNLSGGITNFVLTFPPETTPLFLDYDEFHPRPPKPGKNVAFMDGHVAPYGSH
Ga0207646_1129643923300025922Corn, Switchgrass And Miscanthus RhizosphereIDLNGHRIDETRTDSAFLLLKQGDPSAGITNFALTFPPGTTPLFLDYDEFHPRPPKPGKNVVFMDGYVAPLEATGDDSRAGEN
Ga0207694_1097195813300025924Corn RhizosphereGHRIDETRTDSAFLLLKKGDLSGGVTNFVITLPPGTTPLFLDYDNFHPRPPRPGKNVVFMDGHTAPLEGR
Ga0207711_1171417123300025941Switchgrass RhizosphereSSYEWNAELNGHRIDETRTDSAFLLLKRGDLSGGITNFVVTFPPGTTPLFLDYDGFHPRPPKPGKNVVFMDGHVAPLEATRDASD
Ga0207712_1115715313300025961Switchgrass RhizosphereSSYEWNAELNGHRIDETQTDTAFLLLKRGDPSGGITNFFQTFPPGKTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEGARD
Ga0207703_1164383413300026035Switchgrass RhizosphereFAAEGSSYEWNAELNGHRIDETQTDTAFLLLKRGDPSGGITNFFQTFPPGKTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEGARD
Ga0209811_1013112443300027821Surface SoilRTDSAFLLLKQGDFSGGITNFVLTFPPGTTPLFLDYDEFHPRPSKPGKNVVFMDGHVAPLEATRDNSD
Ga0265322_1007289433300028654RhizosphereSYEWNTDLNGERMDETRTDSAFLLLKQGDPSAGITNFSLTFPPAATPLLLDYDEFHPRPPKLGKNVVFMDGHVAPLEGTRDVSH
Ga0311360_1113781013300030339BogFLLLKPGDWSGGITNFVLALPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDASDGGGGG
Ga0170834_11379594523300031057Forest SoilGRFATEGSSYEWNADLNGHRMDETQTDSAFLLLKQGEPSGGITNFVLTLPPGTTPLFLDYDGFHPRPPKPGKNVVFMDGHVAPL
Ga0170824_10480882713300031231Forest SoilAFLLFEQGNPSAGITNFVVTFPPGTTPLFLDYDEFHSRPPKPGKNVVFMDGHVAPLEATRDASN
Ga0170818_10583414723300031474Forest SoilAEGSSYEWNADLNGHRIDEARTDSAFLLLEKGNPSAGITNFVQTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDASD
Ga0170818_10606062723300031474Forest SoilMGRFAAEGSSYEWNADLNGHRIDETRTDSAFLLLQKGNPSGGITNFVVTFPPGTTPLFLDYDNFHPRPPKPGKNVVFMDGHVAPLEATRDASD
Ga0310887_1085906523300031547SoilWNYDLNGHRIDETRTDSAFLLLKQGDITGGITNFVLTFPPETTPLFLDYDEFHPRPPKPGKNVVFVDGHVAPLEASDD
Ga0310915_1039060513300031573SoilATEGSSYEWNAELNGHHIDEPRTDSAFLLLQKGNPSGGITNFVMTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATGDE
Ga0307414_1170771113300032004RhizosphereRTDHAFLLVRPGDASGGITNFYLTFPPAATPLLLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRD
Ga0307472_10045564223300032205Hardwood Forest SoilLKQGDFSGGITNFVLTFPPGTTPLFLDYDDFHPRPPKPGKNVVFMDGHVAPLEATRDASD
Ga0306920_10140855923300032261SoilYEWNADLNGHRIDETRTDSAFLLLKQGDLSGGITNFVMTFPPGTTPLFLDYDDFHRRPPKPGKNVVFMDGHVAPLEANRDESD
Ga0315287_1276786223300032397SedimentTDGAFLLFKKGDPSGGITNFVLTFPPGTTPLFLDYDNFHPRPPKPGKNVVFMDGHVAPLEATGDGSRAGEE
Ga0335081_1100742123300032892SoilDREGYFAREGSSYEWNVALNGHRIDETRTDSAFLLLHQGDISGGVTNFVLTLPPGTTPLLLDYDQFHPRPPKSGKNVVFMDGHVAPLEAPGDDLREGEE
Ga0334722_1071574213300033233SedimentLLLKQGDFSGGITNFVLTFPPGTTPLLLDYDEFHPRPPKPGKNVVFMDGHVAPLEATRDASD
Ga0316617_10200182123300033557SoilRTDSAFLLLKKGDPSGGMTNFFLTFPPGTTPLLLDYDAFHPRSPEPGKNVVFMDGHVAALEGLHDASN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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