NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091528

Metagenome / Metatranscriptome Family F091528

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091528
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 88 residues
Representative Sequence MSDHSRARAAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Number of Associated Samples 93
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 62.26 %
% of genes near scaffold ends (potentially truncated) 35.51 %
% of genes from short scaffolds (< 2000 bps) 92.52 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (52.336 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(17.757 % of family members)
Environment Ontology (ENVO) Unclassified
(47.664 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(74.766 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.99%    β-sheet: 0.00%    Coil/Unstructured: 47.01%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF09685DUF4870 18.69
PF14534DUF4440 8.41
PF12697Abhydrolase_6 4.67
PF07883Cupin_2 1.87
PF00296Bac_luciferase 1.87
PF06999Suc_Fer-like 1.87
PF00248Aldo_ket_red 0.93
PF14013MT0933_antitox 0.93
PF09900DUF2127 0.93
PF03989DNA_gyraseA_C 0.93
PF028262-Hacid_dh_C 0.93
PF00440TetR_N 0.93
PF04542Sigma70_r2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.87
COG4759Uncharacterized conserved protein, contains thioredoxin-like domainGeneral function prediction only [R] 1.87
COG0188DNA gyrase/topoisomerase IV, subunit AReplication, recombination and repair [L] 0.93
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.93
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.93
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.93
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.34 %
UnclassifiedrootN/A47.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c1865057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium601Open in IMG/M
3300005327|Ga0070658_10939017Not Available752Open in IMG/M
3300005329|Ga0070683_100365598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1374Open in IMG/M
3300005331|Ga0070670_100805996Not Available848Open in IMG/M
3300005337|Ga0070682_100482522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales956Open in IMG/M
3300005338|Ga0068868_101559185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia620Open in IMG/M
3300005343|Ga0070687_100109425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1561Open in IMG/M
3300005344|Ga0070661_101426213Not Available583Open in IMG/M
3300005345|Ga0070692_10873593Not Available620Open in IMG/M
3300005354|Ga0070675_101244185All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300005356|Ga0070674_101716024Not Available568Open in IMG/M
3300005438|Ga0070701_10167520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1277Open in IMG/M
3300005438|Ga0070701_10477442Not Available805Open in IMG/M
3300005441|Ga0070700_101478827Not Available577Open in IMG/M
3300005455|Ga0070663_101934823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia530Open in IMG/M
3300005455|Ga0070663_102063453Not Available514Open in IMG/M
3300005456|Ga0070678_100526131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1047Open in IMG/M
3300005539|Ga0068853_100616900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium1031Open in IMG/M
3300005543|Ga0070672_100762725Not Available849Open in IMG/M
3300005547|Ga0070693_100722666Not Available731Open in IMG/M
3300005548|Ga0070665_100805196All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300005577|Ga0068857_100743239Not Available934Open in IMG/M
3300005614|Ga0068856_101774944Not Available629Open in IMG/M
3300005616|Ga0068852_101654711Not Available662Open in IMG/M
3300005841|Ga0068863_100504103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1192Open in IMG/M
3300005843|Ga0068860_100995610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia856Open in IMG/M
3300006846|Ga0075430_100242018Not Available1495Open in IMG/M
3300006954|Ga0079219_11301364Not Available640Open in IMG/M
3300009094|Ga0111539_11597831Not Available756Open in IMG/M
3300009094|Ga0111539_11684040Not Available735Open in IMG/M
3300009098|Ga0105245_10782541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae991Open in IMG/M
3300010373|Ga0134128_11750543Not Available684Open in IMG/M
3300010373|Ga0134128_12121209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia619Open in IMG/M
3300011119|Ga0105246_10428452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1106Open in IMG/M
3300012212|Ga0150985_111716985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1252Open in IMG/M
3300012507|Ga0157342_1085541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia503Open in IMG/M
3300013105|Ga0157369_10448795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1336Open in IMG/M
3300013296|Ga0157374_10869676Not Available919Open in IMG/M
3300013306|Ga0163162_13356983Not Available512Open in IMG/M
3300013307|Ga0157372_11144120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia900Open in IMG/M
3300014326|Ga0157380_11653308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria697Open in IMG/M
3300014968|Ga0157379_11934271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300014969|Ga0157376_11580291Not Available690Open in IMG/M
3300015200|Ga0173480_10993070Not Available552Open in IMG/M
3300017792|Ga0163161_11156708Not Available667Open in IMG/M
3300017965|Ga0190266_10551851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora foliorum685Open in IMG/M
3300018073|Ga0184624_10271625Not Available760Open in IMG/M
3300018432|Ga0190275_10081312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2813Open in IMG/M
3300018466|Ga0190268_10193481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1100Open in IMG/M
3300018466|Ga0190268_12105207All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300018469|Ga0190270_10856000Not Available922Open in IMG/M
3300018469|Ga0190270_11270726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria777Open in IMG/M
3300018469|Ga0190270_11290902Not Available772Open in IMG/M
3300018469|Ga0190270_11883010Not Available655Open in IMG/M
3300018476|Ga0190274_10566500Not Available1154Open in IMG/M
3300018481|Ga0190271_10038136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia hierapolitana3965Open in IMG/M
3300018481|Ga0190271_10389361Not Available1485Open in IMG/M
3300018920|Ga0190273_10660607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora foliorum802Open in IMG/M
3300020082|Ga0206353_10840258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1630Open in IMG/M
3300022195|Ga0222625_1591469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia725Open in IMG/M
3300025321|Ga0207656_10539855Not Available593Open in IMG/M
3300025901|Ga0207688_10038941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia2640Open in IMG/M
3300025901|Ga0207688_10769008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia610Open in IMG/M
3300025914|Ga0207671_10752178Not Available774Open in IMG/M
3300025918|Ga0207662_10523984Not Available818Open in IMG/M
3300025919|Ga0207657_10300307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1272Open in IMG/M
3300025926|Ga0207659_10878749Not Available771Open in IMG/M
3300025932|Ga0207690_10515547All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300025937|Ga0207669_11814947Not Available521Open in IMG/M
3300025938|Ga0207704_11749641Not Available534Open in IMG/M
3300025940|Ga0207691_10682636Not Available866Open in IMG/M
3300025941|Ga0207711_11358517Not Available653Open in IMG/M
3300025944|Ga0207661_10505250Not Available1105Open in IMG/M
3300025972|Ga0207668_10996535Not Available749Open in IMG/M
3300025986|Ga0207658_11852614Not Available550Open in IMG/M
3300026023|Ga0207677_10478771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1072Open in IMG/M
3300026067|Ga0207678_10125036All Organisms → cellular organisms → Bacteria2194Open in IMG/M
3300026067|Ga0207678_10163067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1903Open in IMG/M
3300026075|Ga0207708_11080171All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300026078|Ga0207702_12082370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia557Open in IMG/M
3300026116|Ga0207674_10948514Not Available829Open in IMG/M
3300026118|Ga0207675_100122282All Organisms → cellular organisms → Bacteria2464Open in IMG/M
3300026121|Ga0207683_11310063Not Available670Open in IMG/M
3300026121|Ga0207683_12115426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia511Open in IMG/M
3300026142|Ga0207698_10436960All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales1260Open in IMG/M
3300026142|Ga0207698_11305905Not Available740Open in IMG/M
3300028381|Ga0268264_11433842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia701Open in IMG/M
3300028587|Ga0247828_10997631Not Available547Open in IMG/M
3300028592|Ga0247822_10268280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1296Open in IMG/M
3300028596|Ga0247821_10317699Not Available953Open in IMG/M
3300028597|Ga0247820_10548617Not Available792Open in IMG/M
3300028803|Ga0307281_10433536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia507Open in IMG/M
3300028812|Ga0247825_10500951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae864Open in IMG/M
3300028889|Ga0247827_11318858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300030336|Ga0247826_11502707Not Available546Open in IMG/M
3300031547|Ga0310887_10096882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1453Open in IMG/M
3300031562|Ga0310886_10536719Not Available711Open in IMG/M
3300031562|Ga0310886_10834778Not Available582Open in IMG/M
3300031858|Ga0310892_11306987Not Available519Open in IMG/M
3300031892|Ga0310893_10412195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia594Open in IMG/M
3300031908|Ga0310900_11599293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia551Open in IMG/M
3300031938|Ga0308175_100060558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3323Open in IMG/M
3300032013|Ga0310906_10050053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2052Open in IMG/M
3300033550|Ga0247829_10600480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia915Open in IMG/M
3300033551|Ga0247830_10981839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae674Open in IMG/M
3300034666|Ga0314788_100416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia650Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil17.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.08%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.41%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere7.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.74%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.87%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.87%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_186505713300000033SoilREAPSARLPAANHPARESISMTDNQRARVAVSTPAMPLDRVLTALRHCTDRELRAMFAHCQXRADEATXTGYVGAGALFAALASLVVAERYDREQAGRAVDEALNGWKP*
Ga0070658_1093901713300005327Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070683_10036559833300005329Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0070670_10080599623300005331Switchgrass RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0070682_10048252223300005337Corn RhizosphereMSDHSCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0068868_10155918513300005338Miscanthus RhizosphereMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP*
Ga0070687_10010942533300005343Switchgrass RhizosphereMSDHSRARGAVITPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070661_10142621323300005344Corn RhizosphereMSDHSCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070692_1087359313300005345Corn, Switchgrass And Miscanthus RhizosphereSCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070675_10124418523300005354Miscanthus RhizosphereTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0070674_10171602413300005356Miscanthus RhizosphereMTDDQKEFISMIGNQPARAAVITPAIPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLITAEQHDREQASRAVDEALKGWNP*
Ga0070701_1016752033300005438Corn, Switchgrass And Miscanthus RhizosphereITPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070701_1047744223300005438Corn, Switchgrass And Miscanthus RhizosphereMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLIMAEQYDREQAGRAVDEALRGWKP*
Ga0070700_10147882713300005441Corn, Switchgrass And Miscanthus RhizosphereMSDHSRARGAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070663_10193482313300005455Corn RhizosphereMTDYQRGRASAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP*
Ga0070663_10206345313300005455Corn RhizosphereMSDHSRARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0070678_10052613123300005456Miscanthus RhizosphereMTDDQKESISMTDDQRARAAVITPAMPLDRVLTALRHCTDRDLRTMFAHCQQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP*
Ga0068853_10061690033300005539Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAADEALKGWRP*
Ga0070672_10076272523300005543Miscanthus RhizosphereMSDHSRARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070693_10072266623300005547Corn, Switchgrass And Miscanthus RhizosphereMPDHSRARSALITPAMPLDRILAALHHCADRDLRALRAHCRRRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0070665_10080519633300005548Switchgrass RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQ
Ga0068857_10074323923300005577Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALHHCADRDLRALRAHCRRRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0068856_10177494423300005614Corn RhizosphereSDHSRARAAVVTPAMPLDRILAALHHCADRDLRALRAHCRRRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0068852_10165471123300005616Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDE
Ga0068863_10050410323300005841Switchgrass RhizosphereRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMAERCDREQAGRAVDEALKGWNHNSDVVRWARQT*
Ga0068860_10099561023300005843Switchgrass RhizosphereMTDDQKEFISMIGNQPARAAVITPAMPLDRVLTALRHCTDRDLRTMFAHCQQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP*
Ga0075430_10024201823300006846Populus RhizosphereMTDHHRARAAVITPAMPLDRVLTALRHCTDRELRAMSAHCEQRADEATDTGYVGAGALFAALADLVMAEQHDREQAGRAVDEALKGWKPPGPDGA*
Ga0079219_1130136423300006954Agricultural SoilMTDHRTRAAVITSAMPLDRVLTALRHCTDRDLRAMFAHCQQCADEATETGYVGVGALFAALADVVVTEQHDREQGGHAVDEALKGWH*
Ga0111539_1159783123300009094Populus RhizosphereMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0111539_1168404023300009094Populus RhizosphereMTDDQKEFISMIGNQPARAAVITPAMPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLITAEQHDREQASRAVDEALKGWNP*
Ga0105245_1078254133300009098Miscanthus RhizosphereAAVITTAMPLDRVLTTLRHCTDRDLRAMFAHCQQRADEATETGYMGAGALFAALADLIMAEQYDREQAGRAVDEALRGWKP*
Ga0134128_1175054313300010373Terrestrial SoilMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0134128_1212120923300010373Terrestrial SoilSRRSISMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP*
Ga0105246_1042845223300011119Miscanthus RhizosphereMTDHQRARAAAITPAVPLDRVLTALRHCTDRDLRTMFAHCQQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP*
Ga0150985_11171698523300012212Avena Fatua RhizosphereMPLDRVLTALRHCTGRDLRAMFAHCQQRADEAMDTGYVGAGALFAALADLLMDEQCDREQAGRAVDEALKGWNA*
Ga0157342_108554113300012507Arabidopsis RhizosphereQRGRAAAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP*
Ga0157369_1044879533300013105Corn RhizosphereVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0157374_1086967633300013296Miscanthus RhizosphereMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP*
Ga0163162_1335698313300013306Switchgrass RhizosphereQMTDDQKEFISMIGNQPARAAVITPAMPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLITAEQHDREQASRAVDEALKGWNP*
Ga0157372_1114412023300013307Corn RhizosphereVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP*
Ga0157380_1165330823300014326Switchgrass RhizosphereMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLLIAEQYDREQAGRAVDEALKGWRP*
Ga0157379_1193427123300014968Switchgrass RhizosphereMTDYQRARAAAITPAVPLDRVLSALRRCTDRDLRALIAHCRQRADEATETGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP*
Ga0157376_1158029113300014969Miscanthus RhizosphereMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMAERCDREQAGRAVDEALKGWNHNSDVVRWARQT*
Ga0173480_1099307013300015200SoilMPLDRVLTALRHCTDRELRAMFAHCQQRADEATETGYVGAGALFAALASLVVAERYDREQAGRAVDEALKGWKP*
Ga0163161_1115670823300017792Switchgrass RhizosphereMSDHSRARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0190266_1055185113300017965SoilMTDHQRARAAAITPVVPLDRVLSALRCCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVTAEQHDREQASSAVDEVLKGWNP
Ga0184624_1027162513300018073Groundwater SedimentMTHYQRARVAAITPAVPLDRVLSALRCCTDRDLRAMIAHCRQRADEATETGYMGAGDLFAALTDLVTAEQYDREEAGRAVDGALKGWRP
Ga0190275_1008131243300018432SoilMTDDQKEFISMTGNQTARAAVITPAMPLDRVLTALGRCTDRELRAMSAHCHQRADEATDTGYVGAGALFAALADLVTAEQHDREQASSAVDEVLKGWNP
Ga0190268_1019348123300018466SoilMADHRRTQGAVITPAVPLDRILTALRHCADRDLRVLFAHCEQRADEATESGYVGAGALFAALADLVVTEQCDREQAGRAVDEALAGWEP
Ga0190268_1210520713300018466SoilGIHPMSDDQSARAAVITAALPLDRVLTALMHCTGRDLRAMFTHFQQRADEATDTGYVGAGALFAALADLVTAEQHDREQASSAVDEVLKGWNP
Ga0190270_1085600033300018469SoilMTDHQHPRAAVTMPAMPLDQILTALRHCTDRDLRAMVAHCQQRADEATETGYVGAGALFAALANLVIAEQYDREQA
Ga0190270_1127072613300018469SoilQKESISMTGNQRARAAVITPAMPLDLVLTALGRCTDRDLRALAAHCHQRADEATETGYVGAGALFAALADLVTAEQHDREQASRAVDEVLKGWNP
Ga0190270_1129090223300018469SoilMTDDQKEFIPMIGNLPARAAVITPALPLDRVLTALARCTDRDLRALSAHCHQRADEATETGYVGAGALFAALADLVTAEQHDREQASLAVDEVLKGWNP
Ga0190270_1188301013300018469SoilMPAMPLDRVLTALGHCTDRDLRAMFAHCQQRADEATETGYVGAGALFTALANWVIAEQYDREQAGRAVDEALKGWKP
Ga0190274_1056650013300018476SoilMTDDQKEFISMTGNQTARAAVITPAMPLDRVLTALGRCTDRELRAMSAHCHQRADEATDTGYVGAGALFAALADLVTAEQHDREHASRAVDEVLKGWNP
Ga0190271_1003813643300018481SoilMTDHQHPRAAVTMPAMPLDQILTALRHCTDRDLRAMVAHCQQRADEATETGYVGAGALFAALANLVIAEQYDREQAGRAVDEALKGWKS
Ga0190271_1038936133300018481SoilMTDDQKEFIPMIGNQPARAAVITPAMPLDRVLTALGRCTDRDLRALSAHCHQRADEATETGYVGAGALFAALADLVMAEQHDREQASLAVDEVLKGWNP
Ga0190273_1066060723300018920SoilMPLDRVLTALGRCTDRELRAMSAHCHQRADEATDTGYVGAGALFAALADLVTAEQHDREQASSAVDEVLKGWNP
Ga0206353_1084025833300020082Corn, Switchgrass And Miscanthus RhizosphereMSDHSCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAADEALKGWRP
Ga0222625_159146923300022195Groundwater SedimentMTHYQRARVAAITPAVPLDRVLSALRCCTDRDLRAMIAHCRQRADEATETGYMGAGALFAALTDLVTAEQYDREEAGRAVDEALTGWRP
Ga0207656_1053985513300025321Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207688_1003894133300025901Corn, Switchgrass And Miscanthus RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207688_1076900823300025901Corn, Switchgrass And Miscanthus RhizosphereAVGSAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP
Ga0207671_1075217813300025914Corn RhizosphereDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207662_1052398423300025918Switchgrass RhizosphereMTDDQKESISMTDDQRARAAVITPAMPLDRVLTALHHCTHRDLRAMFTHCQQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207657_1030030723300025919Corn RhizosphereMSDHSCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207659_1087874933300025926Miscanthus RhizosphereSDHSRARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207690_1051554713300025932Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGL
Ga0207669_1181494713300025937Miscanthus RhizosphereHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207704_1174964123300025938Miscanthus RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAV
Ga0207691_1068263623300025940Miscanthus RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCTDRDLRALRTHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207711_1135851713300025941Switchgrass RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLA
Ga0207661_1050525033300025944Corn RhizosphereARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP
Ga0207668_1099653513300025972Switchgrass RhizosphereCARGAVITPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207658_1185261423300025986Switchgrass RhizosphereVSMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207677_1047877123300026023Miscanthus RhizosphereALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMAERCDREQAGRAVDEALKGWNHNSDVVRWARQT
Ga0207678_1012503613300026067Corn RhizosphereMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMAERCDREQAGRAVDEALKGWNHNSDVVRWARQT
Ga0207678_1016306713300026067Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP
Ga0207708_1108017113300026075Corn, Switchgrass And Miscanthus RhizosphereMSDHSRARGAVVTPAMPLDRILAALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207702_1208237023300026078Corn RhizosphereLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMAERCDREQAGRAVDEALKGWNHNSDVVRWARQT
Ga0207674_1094851423300026116Corn RhizosphereMSDHSRARAAVVTPAMPLDRILAALHHCADRDLRALRAHCRRRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207675_10012228233300026118Switchgrass RhizosphereMSDHSRARGAVITPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0207683_1131006323300026121Miscanthus RhizosphereVSMSDHSRARGAVVTPAMPLDRILVALRHCTDRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQSGLAVDEALKGWRP
Ga0207683_1211542613300026121Miscanthus RhizosphereRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP
Ga0207698_1043696023300026142Corn RhizosphereILAALRHCTDRDLRALRAHCRQRADEATETGYMGAGALFAALSDLIMAEQYDREQAGRAVDEALRGWKP
Ga0207698_1130590523300026142Corn RhizosphereMPDHSRARSALITPAMPLDRILAALHHCADRDLRALRAHCRRRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0268264_1143384223300028381Switchgrass RhizosphereMTDDQRARAAVITPAMPLDRVLTALRHCTDRDLRTMFAHCQQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP
Ga0247828_1099763123300028587SoilMTDDKKEFNPMIGNLPARAAVITPALPLDRVLTALARCTDRDLRALSAHCHQRADEATETGYVGAGALFAALADLVMAEQHDREQASLAVDEVLKGWSP
Ga0247822_1026828023300028592SoilMTDDQKEFISMIGNQPARAAVITPAMPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLVMAEQHDREQASLAVDEVLKGWSP
Ga0247821_1031769923300028596SoilMTDDQKEFISMIGNQPARAAVITPAMPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLITAEQHDREQASRAVDEALKGWNP
Ga0247820_1054861713300028597SoilMTDYQKEFIPMIGNQPARAAVITPAMPLDRVLTAMGRCTDRELRALSAHCHQRADEATETGYVGAGALFAALADLVTAEQHDREQASRAVDEALKGWNP
Ga0307281_1043353623300028803SoilMTDYQRARAVTITPVVPFDRVLSALRCCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALTDLVTAEQYDREEAGRAVDEALKGWRP
Ga0247825_1050095133300028812SoilAPAMPLDRILAALRHCADRDLRALRAHCRQRADEATETGYLGAGALFAALADLVVVEQHDREQAGLAVDEALNGWRP
Ga0247827_1131885813300028889SoilRPARESIQMTDQQKELISMIGNQPPRAAVITPAMPLDRVLTALGRCTDRELRVLSAHCHQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP
Ga0247826_1150270713300030336SoilMTDYQKEFIPMIGNQPARAAVITPAMPLDRVLTAMGRCTDRELRALSAHCHQRADEATETGYVGAGALFAALADLVTAEQHD
Ga0310887_1009688233300031547SoilMTDYQRGRAAAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0310886_1053671923300031562SoilMTDYQRGRASAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0310886_1083477813300031562SoilMTDHHRARAAVITPAMPLDRVLTALRHCTDRELRAMSAHCEQRADEATDTGYVGAGALFAALADLVMAEQHDREQAGRAVDEALKGWKPPGPDGA
Ga0310907_1060678823300031847SoilRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0310892_1130698723300031858SoilVLTALRHCTDRELRAMSAHCEQRADEATDTGYVGAGALFAALADLVMAEQHDREQAGRAVDEALKGWKPPGPDGA
Ga0310893_1041219513300031892SoilMTDYQRGRAAAMTPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREVAGRAVDEALKGWRP
Ga0310900_1159929323300031908SoilSISMTDYQRGRAAAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0308175_10006055843300031938SoilMTDNQRARVAVSTPAMPLDRVLTALRHCTDRDLRALFTHCQQRADEATETGYVGAGALFAALASVVVAERYDREQAGRAVDEALNGWRP
Ga0310906_1005005343300032013SoilISMTDYQRGRAAAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0247829_1060048023300033550SoilMTDHQRARAAAITPAVPLDRVLSALRRCTDRDLRAMIAHCRQRADEATETGYVGAGALFAALADLVMTERYDREEAGRAVDEALKGWRP
Ga0247830_1098183923300033551SoilMTDYQRARAAAITPVVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP
Ga0314788_100416_425_6493300034666SoilVPLDRVLSALHRCTDRELRAMFTHCLQRADEATESGYVGAGALFAALTDLVMAEQYDREEAGRAVDEALKGWRP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.