Metagenome / Metatranscriptome Family F091509

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091509
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	62 residues
Representative Sequence	IGLIAAVTVEIVDTSVVDVYTAILAVGAFAALNRWHGKLTVLYVVLGCGLIGAALELTVV
Number of Associated Samples	81
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.89 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	94.39 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (24.299 % of family members)
Environment Ontology (ENVO)	Unclassified (29.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.82% β-sheet: 0.00% Coil/Unstructured: 43.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08448	PAS_4	3.74
PF03795	YCII	2.80
PF00282	Pyridoxal_deC	2.80
PF00903	Glyoxalase	2.80
PF02417	Chromate_transp	2.80
PF02261	Asp_decarbox	1.87
PF08281	Sigma70_r4_2	1.87
PF08241	Methyltransf_11	1.87
PF08240	ADH_N	1.87
PF00254	FKBP_C	1.87
PF01812	5-FTHF_cyc-lig	1.87
PF01545	Cation_efflux	1.87
PF02739	5_3_exonuc_N	1.87
PF00106	adh_short	0.93
PF03976	PPK2	0.93
PF00196	GerE	0.93
PF01037	AsnC_trans_reg	0.93
PF01436	NHL	0.93
PF00583	Acetyltransf_1	0.93
PF01704	UDPGP	0.93
PF12680	SnoaL_2	0.93
PF13483	Lactamase_B_3	0.93
PF00440	TetR_N	0.93
PF01546	Peptidase_M20	0.93
PF00909	Ammonium_transp	0.93
PF01627	Hpt	0.93
PF04261	Dyp_perox	0.93
PF08207	EFP_N	0.93
PF01609	DDE_Tnp_1	0.93
PF11017	DUF2855	0.93
PF13360	PQQ_2	0.93
PF14333	DUF4389	0.93
PF08327	AHSA1	0.93
PF03992	ABM	0.93
PF08031	BBE	0.93
PF00004	AAA	0.93
PF02452	PemK_toxin	0.93
PF04551	GcpE	0.93
PF01022	HTH_5	0.93
PF09996	DUF2237	0.93
PF10335	DUF294_C	0.93
PF00768	Peptidase_S11	0.93
PF00512	HisKA	0.93
PF07883	Cupin_2	0.93
PF03411	Peptidase_M74	0.93
PF02589	LUD_dom	0.93
PF07366	SnoaL	0.93
PF02580	Tyr_Deacylase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	2.80
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	2.80
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.80
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.87
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	1.87
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	1.87
COG0853	Aspartate 1-decarboxylase	Coenzyme transport and metabolism [H]	1.87
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.87
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.87
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.93
COG0231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	Translation, ribosomal structure and biogenesis [J]	0.93
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.93
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.93
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.93
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.93
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.93
COG4284	UDP-N-acetylglucosamine pyrophosphorylase	Carbohydrate transport and metabolism [G]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.66 %
Unclassified	root	N/A	28.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.38 %
Unclassified	root	N/A	28.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.15 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.67 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.67 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.80 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.67 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.80 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	0.93 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.93 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.93 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.67 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.80 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.93 %
Microbacterium gorillae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium gorillae	0.93 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.93 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.67 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.80 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	0.93 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.93 %
Microbacterium gorillae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium gorillae	0.93 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02HFK34	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	603	Open in IMG/M
3300001546\|JGI12659J15293_10124372	Not Available	561	Open in IMG/M
3300001686\|C688J18823_10355074	Not Available	954	Open in IMG/M
3300001686\|C688J18823_10687370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300002077\|JGI24744J21845_10047217	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300002155\|JGI24033J26618_1048665	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300004081\|Ga0063454_100631051	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300004081\|Ga0063454_101886921	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300004463\|Ga0063356_105638811	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004480\|Ga0062592_100495252	Not Available	1007	Open in IMG/M
3300005093\|Ga0062594_100237789	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005093\|Ga0062594_101667265	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005334\|Ga0068869_101264101	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005343\|Ga0070687_100557017	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300005364\|Ga0070673_101741829	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300005366\|Ga0070659_101007969	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005518\|Ga0070699_101051079	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005530\|Ga0070679_101306291	Not Available	671	Open in IMG/M
3300005546\|Ga0070696_101562368	Not Available	566	Open in IMG/M
3300005578\|Ga0068854_100768041	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005615\|Ga0070702_100086675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1889	Open in IMG/M
3300005840\|Ga0068870_10554138	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300006853\|Ga0075420_101825242	All Organisms → cellular organisms → Bacteria → Terrabacteria group	520	Open in IMG/M
3300007004\|Ga0079218_12090279	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009012\|Ga0066710_102875378	Not Available	677	Open in IMG/M
3300009094\|Ga0111539_11815466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300009545\|Ga0105237_12684606	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009789\|Ga0126307_10017369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5369	Open in IMG/M
3300009789\|Ga0126307_10389813	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300009789\|Ga0126307_11557329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	536	Open in IMG/M
3300009840\|Ga0126313_10876307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	732	Open in IMG/M
3300010036\|Ga0126305_10472558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300010037\|Ga0126304_10103037	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300010037\|Ga0126304_10430466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300010037\|Ga0126304_10859786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium gorillae	616	Open in IMG/M
3300010037\|Ga0126304_11030969	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010038\|Ga0126315_10055352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2167	Open in IMG/M
3300010038\|Ga0126315_10403632	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300010038\|Ga0126315_10593420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300010039\|Ga0126309_10074242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	1692	Open in IMG/M
3300010040\|Ga0126308_10124556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1604	Open in IMG/M
3300010040\|Ga0126308_10229620	Not Available	1201	Open in IMG/M
3300010040\|Ga0126308_11188784	Not Available	539	Open in IMG/M
3300010040\|Ga0126308_11308117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300010040\|Ga0126308_11309534	Not Available	515	Open in IMG/M
3300010041\|Ga0126312_10335634	Not Available	1070	Open in IMG/M
3300010042\|Ga0126314_10254048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300010042\|Ga0126314_10438513	Not Available	944	Open in IMG/M
3300010042\|Ga0126314_11336609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	538	Open in IMG/M
3300010044\|Ga0126310_10137782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300010045\|Ga0126311_11394754	Not Available	584	Open in IMG/M
3300010166\|Ga0126306_11163248	All Organisms → cellular organisms → Bacteria → Terrabacteria group	633	Open in IMG/M
3300010166\|Ga0126306_11224077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	617	Open in IMG/M
3300010375\|Ga0105239_10170831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2431	Open in IMG/M
3300010395\|Ga0058701_10632610	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300011106\|Ga0151489_1308403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	503	Open in IMG/M
3300012045\|Ga0136623_10416228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	568	Open in IMG/M
3300012094\|Ga0136638_10455294	Not Available	606	Open in IMG/M
3300012188\|Ga0136618_10302619	Not Available	689	Open in IMG/M
3300012198\|Ga0137364_10216800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300012531\|Ga0136640_10000338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	17664	Open in IMG/M
3300012681\|Ga0136613_10758145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012684\|Ga0136614_10604369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300012684\|Ga0136614_10741518	All Organisms → cellular organisms → Bacteria → Terrabacteria group	689	Open in IMG/M
3300012684\|Ga0136614_11045092	Not Available	561	Open in IMG/M
3300012908\|Ga0157286_10392043	Not Available	536	Open in IMG/M
3300012958\|Ga0164299_10272244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1024	Open in IMG/M
3300012958\|Ga0164299_10715651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300012985\|Ga0164308_10610620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300012985\|Ga0164308_11265683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300012989\|Ga0164305_11917424	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300013102\|Ga0157371_11176000	Not Available	590	Open in IMG/M
3300013763\|Ga0120179_1151007	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300014271\|Ga0075326_1094887	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300014307\|Ga0075304_1029042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300014487\|Ga0182000_10174641	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300014488\|Ga0182001_10652292	Not Available	515	Open in IMG/M
3300017695\|Ga0180121_10001588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9656	Open in IMG/M
3300017787\|Ga0183260_10144618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300017787\|Ga0183260_10763331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300017789\|Ga0136617_10519990	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300018422\|Ga0190265_10595971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1224	Open in IMG/M
3300018432\|Ga0190275_11898996	Not Available	674	Open in IMG/M
3300018432\|Ga0190275_12842741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300018469\|Ga0190270_10156247	Not Available	1862	Open in IMG/M
3300018469\|Ga0190270_12497162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	579	Open in IMG/M
3300018481\|Ga0190271_13375626	Not Available	535	Open in IMG/M
3300018920\|Ga0190273_11544771	Not Available	589	Open in IMG/M
3300019356\|Ga0173481_10175510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	907	Open in IMG/M
3300019377\|Ga0190264_12345104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300020020\|Ga0193738_1164455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	580	Open in IMG/M
3300020181\|Ga0196958_10360635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	547	Open in IMG/M
3300024430\|Ga0196962_10095016	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300025908\|Ga0207643_10503814	Not Available	774	Open in IMG/M
3300025927\|Ga0207687_11629677	Not Available	554	Open in IMG/M
3300025935\|Ga0207709_10356088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300026325\|Ga0209152_10311386	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300028587\|Ga0247828_10331416	Not Available	852	Open in IMG/M
3300028787\|Ga0307323_10385719	Not Available	501	Open in IMG/M
3300031548\|Ga0307408_100351668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1251	Open in IMG/M
3300031548\|Ga0307408_100684185	Not Available	920	Open in IMG/M
3300031852\|Ga0307410_11357091	Not Available	623	Open in IMG/M
3300031995\|Ga0307409_101178216	All Organisms → cellular organisms → Bacteria → Terrabacteria group	789	Open in IMG/M
3300032002\|Ga0307416_101575036	Not Available	762	Open in IMG/M
3300032126\|Ga0307415_101826134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	589	Open in IMG/M
3300034000\|Ga0334918_005591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.64%
Host-Associated	Host-Associated	22.43%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.42%
Plants	Host-Associated → Plants	22.43%
Aquatic	Environmental → Aquatic	11.21%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.95%
Freshwater	Environmental → Aquatic → Freshwater	11.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Phylloplane	Host-Associated → Plants → Phylloplane	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.08%
Ice	Environmental → Aquatic → Freshwater → Ice	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Sand	Environmental → Terrestrial → Soil → Sand	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	24.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.89%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	11.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_01575330	2170459015	Switchgrass, Maize And Mischanthus Litter	CSASRLASSVSIASVTVQILDTSIVDGYTAILAIAAFAVLYRFHGKLTVLYVVLGCGAIGALLQATVV
JGI12659J15293_101243721	3300001546	Forest Soil	AAVIGLIAAVTVTILETSVVDVYTALIALGAFAALQRWHGKLTVVYVMAVAGIIGVILQHTVV*
C688J18823_103550741	3300001686	Soil	VTVEILGASVVDLYTAALALGAFLALNKWHGKLTVLYVVAACGILGVVAPAA*
C688J18823_106873702	3300001686	Soil	GVIGLIAAVTVQIVDTSVVDVPTALLAIGAFAALNRWHGKLTVVYVVLGCGLIGAGLQITGLV*
JGI24744J21845_100472172	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	PFLLGVAAAVIGLIAAVTVDILETSIVDVWTAILAIGAFLVLNRWHGKLTVLYVVLGCGLIGAGLQLSGIA*
JGI24033J26618_10486651	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	GVAAGVIGLIAAVTVEILDTSVVDAYTALLALGAFLALNRWHGKLTVLWVVLSCGAFGALQQAIVG*
Ga0063454_1006310511	3300004081	Soil	AVTVEILDASVVDGFTAALALGAFLALNRWHGKLTVLYVVLSCGAIGAVLQLTVA*
Ga0063454_1018869211	3300004081	Soil	AAGVIGLIAAVTIDILDTSIVDVPTALLAVGAFAALNRWHGKLTVLWVVGACGLIGAGLQASGVV*
Ga0063356_1056388112	3300004463	Arabidopsis Thaliana Rhizosphere	GLIAAVTVEIVETGVVDVPTALLALGAFAALMRFHAKLTVLYVVLSCGLVGVVLQLTVV*
Ga0062592_1004952522	3300004480	Soil	TVQIVGTSVVDLPTALLAIGAFMALNRWHGKLTVVYVVLGCGLIGAALQLSGLV*
Ga0062594_1002377891	3300005093	Soil	AVIGLIAAVTVDILDTSVVDVYTAILAVASFLVLNRFHGKLTVLYVVLGCGVIGAVLQATVV*
Ga0062594_1016672652	3300005093	Soil	VAAGVIGLIAAVTVDIVDTSVVDVPTAILAIGGFLVLNRWHGKLTVLYVVLGCGLIGAVLQLSNVV*
Ga0068869_1012641012	3300005334	Miscanthus Rhizosphere	FLLGVAAAVIGLIAAVTVDILETSIVDVWTAILAIGAFLVLNRWHGKLTVLYVVLGCGLIGAGLQLSGIA*
Ga0070687_1005570171	3300005343	Switchgrass Rhizosphere	GLIAAVTVDLLDASVPDWPSALLALGAFAALYRWSGKLTVLWVVLGCGVIGALLQLTVL*
Ga0070673_1017418291	3300005364	Switchgrass Rhizosphere	VVGLIAAVTVDLLDASVPDWPSALLALGAFAALYRWSGKLTVLWVVLGCGAIGALLQLTVL*
Ga0070659_1010079692	3300005366	Corn Rhizosphere	VTVDIVDTSVVDGWTAALAILAFAVLQLWHGKLTVVYVVLGCGALGALLQATVV*
Ga0070699_1010510791	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AVTVQIVKTSVVDVYTALIAIAAFAILVRFHSKLTVLYVVLGGGAIGAVLQATVV*
Ga0070679_1013062911	3300005530	Corn Rhizosphere	GVIGLIAAVTVDIVDTSVVDVWTAVLAIGAFLVLNRWHGKLTVLYVVLGCGLIGAGLQLSGIA*
Ga0070696_1015623683	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AVTVEILKTSVVDVYTALLAIGAFLALNRWHSKLTVLWVVLGCGAIGVILQSTIV*
Ga0068854_1007680412	3300005578	Corn Rhizosphere	VIGLIAAVTVDILETSIVDVWTAILAIGAFLVLNRWHGKLTVLYVVLGCGLIGAGLQLSGIA*
Ga0070702_1000866751	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LIAAVTVDIVETSVVDGYTAALAIGAFLALNRWHGKLTVLYVVLACGLLGAALQLTVV*
Ga0068870_105541382	3300005840	Miscanthus Rhizosphere	LLGVAAGVIGLIAAVTVEILDTSVVDAYTALLALGAFLALNRWHGKLTVLWVVLSCGAFGALQQAIVG*
Ga0075420_1018252421	3300006853	Populus Rhizosphere	TVDIIDESIIDISTAALAVGAFVVLNRWHGKLTVLYVVLGCGAVGALLQLAGLV*
Ga0079218_120902791	3300007004	Agricultural Soil	LIAAVTIQILDTSVVDVYTAILAAAAFAVLYRFHGKLTVLYVVLGCGAIGALLQATVI*
Ga0066710_1028753782	3300009012	Grasslands Soil	IGLIASVTVQLVDTSVVDAPTAVLAIGAFLALNRWHGKLTVVYVVLGCGLIGAALQLSGL
Ga0111539_118154661	3300009094	Populus Rhizosphere	VTVDIVDTSVVDVPTAILAIGGFLVLNRWHGKLTVLYVVLACGLVGAVLQLSNVV*
Ga0105237_126846062	3300009545	Corn Rhizosphere	IAAVGVQIAKTSIVDVYTALLAIAGFVALNRFHSRLTVIYVVIGCGVAGALIKLALGG*
Ga0126307_100173698	3300009789	Serpentine Soil	VIGLIAAVTVEILDTSVVDLPTALLAVGALVALNRWHGKLTVLYVVLGCGLIGLAIQAIGIA*
Ga0126307_103898132	3300009789	Serpentine Soil	VIGLIAAVTVQIVETSVVDVPTALIALAAFAALMRFHSQLTVLWVVLACGAIGAALQLTVL*
Ga0126307_115573292	3300009789	Serpentine Soil	LIAAVTVDLVRAAVVDVPSALLAVAAFAILYRSHGKLTVLAVVLGCGAVGALLRLTVLAA
Ga0126313_108763072	3300009840	Serpentine Soil	PFLLGVAAAVIGLIAAVTVDVLDASVVDVPTAVLAIAAFAALNRWHGKLVVVAAVLGCGAIGTLLQTTDLV*
Ga0126305_104725582	3300010036	Serpentine Soil	AAAVVGLIAAVTLDIADTAIVDVPTAILALGAFAALMRFHAKLTVLYVVLGCGLVGVALQATVI*
Ga0126304_101030371	3300010037	Serpentine Soil	AAVTVQIVETSVVDVPTALIALAAFAALMRFHSQLTVLWVVLACGAIGAALQLTVL*
Ga0126304_104304662	3300010037	Serpentine Soil	IGLIAAVTVEIVDTSVVDVYTAILAVGAFAALNRWHGKLTVLYVVLGCGLIGAALELTVV
Ga0126304_108597863	3300010037	Serpentine Soil	RIRPFLLGVAAGVNSLIGAVTLEIVEQSVVDVPSALLAVGAFAALYRFHGKLTVLAVVLGCGAIGAALQAAAVV*
Ga0126304_110309691	3300010037	Serpentine Soil	TVQILDTSVVDVYTAILAVAAFAVLYRFHGKLTVLYVVLGCGAIGALLQATVV*
Ga0126315_100553523	3300010038	Serpentine Soil	GVAAGVIGLIAAITVHIVDTSVVDAYTAVLAVGAFAALQRWHGKLTVLYAVLGCGLIGALLQLTIL*
Ga0126315_104036322	3300010038	Serpentine Soil	IAAGVVGLIAAVTVEILDAGVVDAYTAALAIGAFLALNRWHDKLTVLYVVLSCGAIGAILQLTVV*
Ga0126315_105934201	3300010038	Serpentine Soil	LIAAVTVEIVDTSVVDVYTAILAVGAFAALNRWHGKLTVLYVVLGCGLIGAALELTVV*
Ga0126309_100742421	3300010039	Serpentine Soil	RIRPFLLGVAAAVIGLIAAVTVDILDASIVDVPTAILAVAAFGALNRWHGKLTVVAVVLGCGAAGVILQATGAV*
Ga0126308_101245561	3300010040	Serpentine Soil	TAGVIGLIAAVTVEIVRESVVDIPTAVLAIAAFAVLYRYHEKLTVLYVVVGCGIAGALVQLAS*
Ga0126308_102296201	3300010040	Serpentine Soil	LIAAVTVEIVRESVVDVPTAVLAIAAFAVLYRYHEKLTVLYVVVGCGIAGALVQLAAGSA
Ga0126308_111887841	3300010040	Serpentine Soil	TVEIVRESVVDVPTAVLAIAAFAVLYRCHEKLTVFYVVVGCGIAGALVQLAS*
Ga0126308_113081172	3300010040	Serpentine Soil	VQILDTSVVDVYTAILAVAAFAVLYRLHGKLTVLYVVLGCGAIGAVLQATVV*
Ga0126308_113095341	3300010040	Serpentine Soil	AAVIGLIAAVTIDILETSIVDVPTAILAVVAFLVLNRFHGKLTVVYVVLGCGAIGLLLQATVV*
Ga0126312_103356341	3300010041	Serpentine Soil	AAVTVDIVRESVVDVPTALLAIAAFAVLMRYHDKLTVLYVVLGCGAVGAALQLTVL*
Ga0126314_102540482	3300010042	Serpentine Soil	VIGLIAAVTVNIVDTSVVDAYTAALAVGPFAALQRWHGKLTVLYVVLGCGLIGALLQLTIA*
Ga0126314_104385131	3300010042	Serpentine Soil	IRPFLLGVAAAVVGLMAAIAVAILGQGVIDLPSAVLAAAAFVVLYRFHGKLTVLYVVLGCGAIGALLQLTVV*
Ga0126314_113366092	3300010042	Serpentine Soil	AAAVVGLIAAVAVTILETSVVDVPTAILATGAFLALNRWHGKLTVLYVVLGCGAIGALLQLTVL*
Ga0126310_101377824	3300010044	Serpentine Soil	FLLGVAAAVIGLIAAVTVDVLDASVVDVPTAVLAIAAFAALNRWHGKLVVVAAVLGCGAIGALLQTTDLV*
Ga0126311_113947541	3300010045	Serpentine Soil	AVTVEILNTSVVDVPTALLALAAFIALIRWHGKLTVVGVVLGCGIAGVLLQATGAV*
Ga0126306_111632482	3300010166	Serpentine Soil	RIRPFLLGVAAGVIGLIGAVTLEILETSVVDIPTALLAVGAFATLYRSQGKLTVLAVVLSCGAIGAILRAAAVV*
Ga0126306_112240771	3300010166	Serpentine Soil	VTVQIVDTSVVDVPTAVLAIGAFLALSRWHGKLTVVYVVLGCGLIGAALQLSGLV*
Ga0105239_101708311	3300010375	Corn Rhizosphere	VTVQIVKTSVVDVYTALIAIAAFAILLRFHSKLTVLYVVLGGGAIGAVLQATVV*
Ga0105239_134481351	3300010375	Corn Rhizosphere	LVAVSENEHLHPFLLGVAAAVIGLIAAVTVTILETSVTDAYTALIALGAFAALQRWHGKLTVVYVMAVAGIVGVVLRHTVV*
Ga0058701_106326103	3300010395	Agave	TVEILDTSVVDVPTALLALGAFVALNRWHAKLTVLYVVLGCGLLGLAIQAAGLA*
Ga0151489_13084031	3300011106	Soil	AAVIGLIAAVTVEIVKTSVVDVYTAVLAIGAFLALNRWHSKLTVVYVVLGCGAIGALLQATVV*
Ga0136623_104162281	3300012045	Polar Desert Sand	GLIAAVTVEILEDGVVDLPTALLAIASFAALYRFQSKLTVLYVVVGAGLAGALLQATVV*
Ga0136638_104552942	3300012094	Polar Desert Sand	VEILDTGVVDVPTAILAVGGFLVLNRYHGKLTVLYVVLGCGLIGAALQLTVV*
Ga0136618_103026191	3300012188	Polar Desert Sand	GVAAAVVGLIAAVTVEILDSGVIDVPTAILAVGGFLVLNRYHGKLTVLYVVLGCGLIGAALQLTVI*
Ga0137364_102168001	3300012198	Vadose Zone Soil	IVKTSVVDVYTALLAIGAFLVLNRFHSNLTVLYVVLGCGAIGALLQATVV*
Ga0136640_100003381	3300012531	Polar Desert Sand	AAVTVDIIETGVVDLPTGLIAVGAFAALMRFHSKLTVLWVVLGCGTIGAALQLTVL*
Ga0136613_107581452	3300012681	Polar Desert Sand	LIAAVTVEIVNASVVDIPTAILAVGGFLALNRWHGKLTVLYVVLGCGLIGAALQLTIL*
Ga0136614_106043691	3300012684	Polar Desert Sand	VTVDIVDTSVVDVPTAVLAVAAFLVLNRWHGKLTVLYVVLGCGATGALLRVTGLV*
Ga0136614_107415182	3300012684	Polar Desert Sand	LGVAAAVIGLIAAVTVEILDASIVDVPSALLAVAAFAVLYRYGGKLTVLFVVLGCGAVGAALQLTVL*
Ga0136614_110450922	3300012684	Polar Desert Sand	AAGVIGLIAAVTVSIVDTGVVDLPTALLAIAGFLALNRWHGKLTVLYVVLGCGLAGAALQLTII*
Ga0157286_103920432	3300012908	Soil	GVAAAVIGLIAAVTVDILETSIVDVWTAILAIGAFLVLNRWHGKLTVLYVVLGCGLIGAGLQLSGIA*
Ga0164299_102722441	3300012958	Soil	VGLIAAVTVEIVDAGVVDAFTAALAVAAFLALNRWHGKLTVLYVVLSCGAAGALAQLAFA
Ga0164299_107156512	3300012958	Soil	GLLGAVNVNIVEASVVDVYTAALAIAAFRALTRCHGKLTVLYVVLACGLIGVALQLTVV*
Ga0164308_106106201	3300012985	Soil	AGVIGLIAAVTVQILKTSVVDVYTALLAIGAFLALNRWHSKLTVLWVVLGCGAIGALLQATVV*
Ga0164308_112656831	3300012985	Soil	GAVTVQILQTSVVDVYTGILAAGAFLVLGRFHSKLTVLYVVLGCGAIGALLQLTVV*
Ga0164305_119174241	3300012989	Soil	AVTVQIVDTSVVDVPTALLAIAAFLALNRWHGKLTVVYVVLGCGLIGVALQLAGLV*
Ga0157371_111760001	3300013102	Corn Rhizosphere	VIGLIAAVTVEIIDTSVVDAYTAALALGAFLALNRWHGKLTVLWVVLTCGAIGALLQLAV
Ga0120179_11510072	3300013763	Permafrost	VRATWGLIGLIAAVTVQIVRTSVVDVYTAILAVGAFLVLNRYHGKLTVLYVVLGCGAIGALLQLTVV*
Ga0075326_10948872	3300014271	Natural And Restored Wetlands	VAAAVIGLIAAVTVTIVETGIVDLPTAFLALAAFLALSRWHAKLTVLYVVAACGIAGVLLQLTVV*
Ga0075304_10290424	3300014307	Natural And Restored Wetlands	RLRALLLGIAAAVIGLIAAFVVDIVGAAITDLWTAALALGAFGALNRWHGKLTVLYVVVGCGAIGALLQALGA*
Ga0182000_101746412	3300014487	Soil	FLLGVAAGVVGLIAAVTVEIVDAGVVDAYTAALALGAFLALNRWHGKLTVLYVVLSCGAIGAILQLTVV*
Ga0182001_106522921	3300014488	Soil	LGSTGEFGLIAAVTIEILDASVVDVPTALLAVGAFAVLNRYHGKLTVLYVVVGCGVIGAV
Ga0180121_1000158813	3300017695	Polar Desert Sand	VTIELVEAGVVDVPTAVLAAGAFAALFRWQGKLTVLWVVGGCGAIGAVLQATVV
Ga0183260_101446181	3300017787	Polar Desert Sand	LIAAVTVEILDASVVDVPTALLALGAFLVLNRFHGKLTVLYVVLGCGLVGAILQLTVI
Ga0183260_107633312	3300017787	Polar Desert Sand	IRPFLLGVAAAVVGLIAAVTVEIVDAGVVDLPTAIRAIGGFLPLNRWHGKLTVLYVVLGCGLIGAAMQLTIL
Ga0136617_105199901	3300017789	Polar Desert Sand	MVAIGGVIGLIAAVTVEIVDASVVDVYTASLAVGAFLILNRYHRKLTVLYVVLGCGLIGAILQATVA
Ga0190265_105959713	3300018422	Soil	RVRPFLLGVAAGVIAVIAATTIEIVEAGVVDVPTAILAVGAFLALSRWQGKLTVLYVVLGAGALGAILQAAGLA
Ga0190275_118989961	3300018432	Soil	LLGVAAAVVGLIAAVTVEIVDNGVGDVPTAVLAMGGFLALNRWHGKLTVLYVVLGCGLIGAALQQAGAV
Ga0190275_128427411	3300018432	Soil	AVTVEILDQSVVDVYTAILAAGAFAVLYRFQGKLTILFVVLGCGALGALLQLTVV
Ga0190270_101562473	3300018469	Soil	IAAVTIDIVDTSVVDVPTAILAIGAFAVLMRWHSRASILYVVLGCGAIGGLLQATGVA
Ga0190270_124971623	3300018469	Soil	AAVTVHIVDTSVVDFPTALLAIGAFLALNRRHGKLTVVYVVLGCGLIGAALQLSGVV
Ga0190271_133756261	3300018481	Soil	AAVIGLIAAVTVTILETSVVDVYTALIALGAFAALQRWHGKLTVVYVMAVAGIVGVVLQHTVA
Ga0190273_115447711	3300018920	Soil	TVEILDTSVVDGYTAVLAVAAFLALNRWHGKLTVLWVVLSCGAIGSLLQLTIA
Ga0173481_101755104	3300019356	Soil	AVTVEILDTSVVDVYTAVLALGAFLALNRWHGKLTVLWVVLSCGAIGALLQLTVA
Ga0190264_123451042	3300019377	Soil	EILETSIVDVYTAALAVGAFAALQRWHGKLTVLWVVLACGAIGVALQATVV
Ga0193738_11644552	3300020020	Soil	AGVIGLIAAVTVTILETSVVDVPTALLAAGAFLALSLWHSKLTVLYVVLGCGAIGAVLQMTVI
Ga0196958_103606351	3300020181	Soil	LIGAVTVELLEAGVVDVPSAILAAAAFLALYRFQGKLTVLYVVLGCGAAGAVLQLSGVV
Ga0196962_100950161	3300024430	Soil	HQFLLGVTAGVLGLIAAVAVEIVEIAVVDGWTAAIAVVSFLALMRWHGRLTVLYVVLGAGAVGALLQYSGVA
Ga0207643_105038141	3300025908	Miscanthus Rhizosphere	LLGVAAGVIGLIAAVTVEILDTSVVDAYTALLALGAFLALNRWHGKLTVLWVVLSCGAFGALQQAIVG
Ga0207687_116296773	3300025927	Miscanthus Rhizosphere	AAVTVEILKTSVVDVYTALLAIAAFLALNRWHSKLTVLWVVLGCGAIGALLQATVV
Ga0207709_103560883	3300025935	Miscanthus Rhizosphere	AAVTVQIVKTSVVDVYTALIAIAAFAILVRFHSKLTVLYVVLGGGAIGAVLQATVV
Ga0209152_103113861	3300026325	Soil	FLLGVAAAVIGLIAAVTIDILDTSIVDVYTAVLAIGAFAALQRWHGKLTVLWVVLTCGVIGLALQATVV
Ga0247828_103314161	3300028587	Soil	VDLLDASVPDVPSALLALGAFAVLYRVHGKLTVLWVMLGCGLLGALLQLTVL
Ga0307323_103857191	3300028787	Soil	VIGLIAAVTVQIVKTSVVDVYTALLAIGAFLALNRWHAKLTVLWVVLGCGAIGALLQATV
Ga0307408_1003516682	3300031548	Rhizosphere	GVAAGVIGLIAAVTVHIVDTSVVDAYTAALALGAFAALQRWHGKLTVLYVVLACGLIGTLLQLTIV
Ga0307408_1006841852	3300031548	Rhizosphere	PRIRPFLLGVAAAVVGLMAAIAVDLLGQAVVDLPSAVLAVAAFAVLYRFHGKLTVLYVVLGCGAIGAMLQLTIV
Ga0307410_113570912	3300031852	Rhizosphere	IGLIAAVTVDIVDTSVVDVWTALLAIGAFLVLNRWHGKMTVLYVVLGCGLIGACIQAVGL
Ga0307409_1011782162	3300031995	Rhizosphere	AGVIGLIAAVTVNIVDTSVVDAYTAALAVGAFAALQRWHGKLTVLYVVLGCGLIGTLLQLTIV
Ga0307416_1015750361	3300032002	Rhizosphere	AAVTVDILDASIVDVPTAILAVAAFGALNRWHGKLTVVAVVLGCGAAGVILQATGAV
Ga0307415_1018261341	3300032126	Rhizosphere	GLIAAVTVDILDASVVDVPTALLAVAAFLALNRWHGKLTIVAVVLSCGLAGVALQATGAT
Ga0334918_005591_1475_1654	3300034000	Hypolithic Biocrust	VIGLIAAVTVEILDTSIVDAYTGALAVGAFLALNRWHGKLTVLYVVLTCGALGAVVQAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091509

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences