Basic Information | |
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Family ID | F091506 |
Family Type | Metagenome |
Number of Sequences | 107 |
Average Sequence Length | 114 residues |
Representative Sequence | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK |
Number of Associated Samples | 83 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 67.29 % |
% of genes near scaffold ends (potentially truncated) | 42.06 % |
% of genes from short scaffolds (< 2000 bps) | 94.39 % |
Associated GOLD sequencing projects | 75 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.32 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (54.206 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.822 % of family members) |
Environment Ontology (ENVO) | Unclassified (43.925 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (64.486 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 62.68% β-sheet: 0.00% Coil/Unstructured: 37.32% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.32 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF04002 | RadC | 57.01 |
PF00034 | Cytochrom_C | 0.93 |
PF07311 | Dodecin | 0.93 |
PF01169 | UPF0016 | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG2003 | DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif | Replication, recombination and repair [L] | 57.01 |
COG2119 | Putative Ca2+/H+ antiporter, TMEM165/GDT1 family | General function prediction only [R] | 0.93 |
COG3360 | Flavin-binding protein dodecin | General function prediction only [R] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 54.21 % |
Unclassified | root | N/A | 45.79 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000955|JGI1027J12803_105651988 | All Organisms → cellular organisms → Bacteria | 1297 | Open in IMG/M |
3300004114|Ga0062593_100139269 | All Organisms → cellular organisms → Bacteria | 1814 | Open in IMG/M |
3300004156|Ga0062589_102846443 | Not Available | 505 | Open in IMG/M |
3300004463|Ga0063356_101234181 | Not Available | 1088 | Open in IMG/M |
3300004463|Ga0063356_101329351 | Not Available | 1053 | Open in IMG/M |
3300004479|Ga0062595_100305496 | All Organisms → cellular organisms → Bacteria | 1075 | Open in IMG/M |
3300004643|Ga0062591_101639517 | Not Available | 650 | Open in IMG/M |
3300005093|Ga0062594_100921224 | Not Available | 828 | Open in IMG/M |
3300005172|Ga0066683_10483975 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 756 | Open in IMG/M |
3300005180|Ga0066685_11040185 | Not Available | 539 | Open in IMG/M |
3300005186|Ga0066676_10158103 | All Organisms → cellular organisms → Bacteria | 1430 | Open in IMG/M |
3300005187|Ga0066675_10410928 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1001 | Open in IMG/M |
3300005332|Ga0066388_101180664 | All Organisms → cellular organisms → Bacteria | 1306 | Open in IMG/M |
3300005334|Ga0068869_101561959 | Not Available | 587 | Open in IMG/M |
3300005335|Ga0070666_10292172 | All Organisms → cellular organisms → Bacteria | 1160 | Open in IMG/M |
3300005355|Ga0070671_100248204 | All Organisms → cellular organisms → Bacteria | 1512 | Open in IMG/M |
3300005367|Ga0070667_100714278 | Not Available | 928 | Open in IMG/M |
3300005441|Ga0070700_100532696 | Not Available | 909 | Open in IMG/M |
3300005446|Ga0066686_10573269 | All Organisms → cellular organisms → Bacteria | 767 | Open in IMG/M |
3300005450|Ga0066682_10338482 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 970 | Open in IMG/M |
3300005455|Ga0070663_101131899 | Not Available | 685 | Open in IMG/M |
3300005457|Ga0070662_100318155 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1268 | Open in IMG/M |
3300005468|Ga0070707_100693988 | All Organisms → cellular organisms → Bacteria | 981 | Open in IMG/M |
3300005543|Ga0070672_101315346 | Not Available | 645 | Open in IMG/M |
3300005547|Ga0070693_101409079 | All Organisms → cellular organisms → Bacteria | 542 | Open in IMG/M |
3300005553|Ga0066695_10470235 | Not Available | 774 | Open in IMG/M |
3300005555|Ga0066692_10094450 | All Organisms → cellular organisms → Bacteria | 1762 | Open in IMG/M |
3300005618|Ga0068864_100165950 | All Organisms → cellular organisms → Bacteria | 2010 | Open in IMG/M |
3300005719|Ga0068861_101840817 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 601 | Open in IMG/M |
3300005764|Ga0066903_102375844 | All Organisms → cellular organisms → Bacteria | 1025 | Open in IMG/M |
3300005842|Ga0068858_100600381 | All Organisms → cellular organisms → Bacteria | 1068 | Open in IMG/M |
3300006046|Ga0066652_100486875 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1143 | Open in IMG/M |
3300006854|Ga0075425_100881239 | Not Available | 1024 | Open in IMG/M |
3300006871|Ga0075434_100397606 | All Organisms → cellular organisms → Bacteria | 1399 | Open in IMG/M |
3300006904|Ga0075424_100330785 | All Organisms → cellular organisms → Bacteria | 1623 | Open in IMG/M |
3300006904|Ga0075424_100724094 | All Organisms → cellular organisms → Bacteria | 1062 | Open in IMG/M |
3300006904|Ga0075424_101185666 | Not Available | 813 | Open in IMG/M |
3300006904|Ga0075424_102555713 | Not Available | 534 | Open in IMG/M |
3300009012|Ga0066710_100131923 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 3431 | Open in IMG/M |
3300009012|Ga0066710_100206831 | All Organisms → cellular organisms → Bacteria | 2799 | Open in IMG/M |
3300009012|Ga0066710_100974895 | Not Available | 1307 | Open in IMG/M |
3300009012|Ga0066710_103720349 | Not Available | 573 | Open in IMG/M |
3300009137|Ga0066709_101889357 | All Organisms → cellular organisms → Bacteria | 832 | Open in IMG/M |
3300009137|Ga0066709_103022272 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 617 | Open in IMG/M |
3300009147|Ga0114129_12973465 | Not Available | 558 | Open in IMG/M |
3300009162|Ga0075423_11074167 | All Organisms → cellular organisms → Bacteria | 857 | Open in IMG/M |
3300009174|Ga0105241_12208580 | Not Available | 546 | Open in IMG/M |
3300009177|Ga0105248_10701890 | All Organisms → cellular organisms → Bacteria | 1142 | Open in IMG/M |
3300009545|Ga0105237_11236870 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 753 | Open in IMG/M |
3300009553|Ga0105249_10427818 | All Organisms → cellular organisms → Bacteria | 1359 | Open in IMG/M |
3300010336|Ga0134071_10356455 | Not Available | 740 | Open in IMG/M |
3300010400|Ga0134122_11653083 | Not Available | 666 | Open in IMG/M |
3300012198|Ga0137364_10985201 | Not Available | 638 | Open in IMG/M |
3300012198|Ga0137364_11106816 | Not Available | 596 | Open in IMG/M |
3300012201|Ga0137365_10330123 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1128 | Open in IMG/M |
3300012285|Ga0137370_10500374 | Not Available | 744 | Open in IMG/M |
3300012350|Ga0137372_10202819 | All Organisms → cellular organisms → Bacteria | 1586 | Open in IMG/M |
3300012354|Ga0137366_10656553 | Not Available | 750 | Open in IMG/M |
3300012356|Ga0137371_10362464 | Not Available | 1126 | Open in IMG/M |
3300012532|Ga0137373_11115733 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 563 | Open in IMG/M |
3300012929|Ga0137404_10023434 | All Organisms → cellular organisms → Bacteria | 4486 | Open in IMG/M |
3300012929|Ga0137404_10698376 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 917 | Open in IMG/M |
3300012930|Ga0137407_10649097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 992 | Open in IMG/M |
3300012930|Ga0137407_11307477 | Not Available | 689 | Open in IMG/M |
3300012930|Ga0137407_11428222 | All Organisms → cellular organisms → Bacteria | 658 | Open in IMG/M |
3300012930|Ga0137407_11768368 | All Organisms → cellular organisms → Bacteria | 589 | Open in IMG/M |
3300012930|Ga0137407_12438729 | Not Available | 500 | Open in IMG/M |
3300012972|Ga0134077_10222545 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 774 | Open in IMG/M |
3300013306|Ga0163162_11085553 | Not Available | 907 | Open in IMG/M |
3300013306|Ga0163162_11491659 | Not Available | 770 | Open in IMG/M |
3300013308|Ga0157375_11087760 | Not Available | 935 | Open in IMG/M |
3300013308|Ga0157375_12181387 | Not Available | 660 | Open in IMG/M |
3300014968|Ga0157379_12301126 | Not Available | 537 | Open in IMG/M |
3300014968|Ga0157379_12644276 | Not Available | 503 | Open in IMG/M |
3300015077|Ga0173483_10252276 | All Organisms → cellular organisms → Bacteria | 841 | Open in IMG/M |
3300015264|Ga0137403_10064865 | All Organisms → cellular organisms → Bacteria | 3723 | Open in IMG/M |
3300015371|Ga0132258_11536834 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 1681 | Open in IMG/M |
3300015371|Ga0132258_11693628 | Not Available | 1595 | Open in IMG/M |
3300015371|Ga0132258_13414470 | All Organisms → cellular organisms → Bacteria | 1090 | Open in IMG/M |
3300015371|Ga0132258_13601924 | Not Available | 1059 | Open in IMG/M |
3300015373|Ga0132257_101451996 | Not Available | 874 | Open in IMG/M |
3300015373|Ga0132257_102256575 | Not Available | 705 | Open in IMG/M |
3300015373|Ga0132257_103063939 | Not Available | 609 | Open in IMG/M |
3300015374|Ga0132255_102585932 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales | 776 | Open in IMG/M |
3300015374|Ga0132255_105385056 | Not Available | 542 | Open in IMG/M |
3300016270|Ga0182036_11868887 | Not Available | 509 | Open in IMG/M |
3300017656|Ga0134112_10158515 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 873 | Open in IMG/M |
3300018431|Ga0066655_10286980 | Not Available | 1067 | Open in IMG/M |
3300018433|Ga0066667_10817009 | Not Available | 794 | Open in IMG/M |
3300018482|Ga0066669_10460058 | Not Available | 1094 | Open in IMG/M |
3300019789|Ga0137408_1210534 | All Organisms → cellular organisms → Bacteria | 4738 | Open in IMG/M |
3300020170|Ga0179594_10184231 | All Organisms → cellular organisms → Bacteria | 780 | Open in IMG/M |
3300025900|Ga0207710_10095593 | All Organisms → cellular organisms → Bacteria | 1396 | Open in IMG/M |
3300025903|Ga0207680_10108312 | All Organisms → cellular organisms → Bacteria | 1797 | Open in IMG/M |
3300025911|Ga0207654_10774219 | All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 692 | Open in IMG/M |
3300025922|Ga0207646_11272368 | All Organisms → cellular organisms → Bacteria | 643 | Open in IMG/M |
3300025933|Ga0207706_10418197 | All Organisms → cellular organisms → Bacteria | 1161 | Open in IMG/M |
3300025941|Ga0207711_10740601 | All Organisms → cellular organisms → Bacteria | 916 | Open in IMG/M |
3300025972|Ga0207668_10829161 | Not Available | 820 | Open in IMG/M |
3300028379|Ga0268266_11571178 | Not Available | 633 | Open in IMG/M |
3300028380|Ga0268265_11595751 | Not Available | 657 | Open in IMG/M |
3300031820|Ga0307473_10496181 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 823 | Open in IMG/M |
3300031954|Ga0306926_12417677 | Not Available | 579 | Open in IMG/M |
3300032180|Ga0307471_100970409 | All Organisms → cellular organisms → Bacteria | 1017 | Open in IMG/M |
3300032205|Ga0307472_100230381 | All Organisms → cellular organisms → Bacteria | 1436 | Open in IMG/M |
3300032205|Ga0307472_102238401 | Not Available | 552 | Open in IMG/M |
3300032261|Ga0306920_101140499 | All Organisms → cellular organisms → Bacteria | 1129 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 16.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.35% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 8.41% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 8.41% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.67% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.74% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.74% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.74% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.74% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.80% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.80% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.80% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.87% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.93% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005450 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012972 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
3300017656 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015 | Environmental | Open in IMG/M |
3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019789 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI1027J12803_1056519882 | 3300000955 | Soil | MKYILHPLSDARSLWSRIERTITAKSSATTSSIRKRWRRSWARKIGWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRTK* |
Ga0062593_1001392694 | 3300004114 | Soil | MKHIIHPLSDARSFWARVQAAVNARSSAATSSIRKQWRRSWARRVGWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDIVRGIEDDVEKERTGHAQTRE* |
Ga0062589_1028464432 | 3300004156 | Soil | KRMKHIMHPLSDARSLWNRIDRAITAKSSATTSSIRKQWRRSWAKKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0063356_1012341811 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKHIMHPLSDARSLWNRIDRAITAKSSATTSSIRKQWRRSWAKKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0063356_1013293511 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0062595_1003054962 | 3300004479 | Soil | MKHIIHPLSDARSLWSRLKRTITAKRSAATSSIRKEWKRSWARKVAWPWLKREVEIISKITGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDIVRGIEDEVEKGRTGHARTRE* |
Ga0062591_1016395171 | 3300004643 | Soil | RVQAAVNARSSAATSSIRKQWRRSWARRVGWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDIVRGIEDDVEKERTGHAQTRE* |
Ga0062594_1009212241 | 3300005093 | Soil | MKHMMHPLSDARSLWARVEGAFTARSSAATSSIRKQWRRSWAKKVAWPWLKREVQIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRSIEDDVEERRRGNARTHK* |
Ga0066683_104839752 | 3300005172 | Soil | MLKRIIDPLHEAREFWNRIETAVTTRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKILNEPVLRGEVNDIVRGIEEDVEQRRPGHARTR |
Ga0066685_110401852 | 3300005180 | Soil | PLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0066676_101581032 | 3300005186 | Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSALRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHARTR* |
Ga0066675_104109282 | 3300005187 | Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0066388_1011806643 | 3300005332 | Tropical Forest Soil | MSTKGIRPSVFRKEERVKHIIHPLSEARSLWARMEKAFTARSSATTSSIRKQWKRSWARKVAWPWLKQEVEIVSKVSGVVVVSLWLKRLVEQFLGKKILNEPVLRGEINDIVRGIEE |
Ga0068869_1015619591 | 3300005334 | Miscanthus Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGR |
Ga0070666_102921721 | 3300005335 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHA |
Ga0070671_1002482041 | 3300005355 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTR |
Ga0070667_1007142782 | 3300005367 | Switchgrass Rhizosphere | ARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0070700_1005326961 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0066686_105732692 | 3300005446 | Soil | MKQIVRLLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWLRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0066682_103384821 | 3300005450 | Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLSKKVLNEPVLRGEVN |
Ga0070663_1011318992 | 3300005455 | Corn Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSAATSSIRKQWRRSWARKVAWPWLKREVQIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRSIEDDVEERRRGNARTHK* |
Ga0070662_1003181553 | 3300005457 | Corn Rhizosphere | MHPLSDARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0070707_1006939881 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKRIIDPLHEAREFWNRIETAVATQSSAARSAVRKRWRRSWVRKTAWPWIKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHARTR |
Ga0070672_1013153462 | 3300005543 | Miscanthus Rhizosphere | SLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0070693_1014090791 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MKHIMHPLSDARSLWARVERAFTARSSAATSSIRKQWRRSWARKVAWPWLKREVQIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVND |
Ga0066695_104702351 | 3300005553 | Soil | ETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHARTR* |
Ga0066692_100944504 | 3300005555 | Soil | MKEIVRPLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWLRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVR |
Ga0068864_1001659503 | 3300005618 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSASTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0068861_1018408172 | 3300005719 | Switchgrass Rhizosphere | MKHMMHPLSDARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0066903_1023758442 | 3300005764 | Tropical Forest Soil | MKHIIHPLHEAQTLWARLETAVTAGSSAATSSIRKQWRRSWARKTAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDIVRGIEDDVERGGSHHGRARE* |
Ga0068858_1006003813 | 3300005842 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSAATSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0066652_1004868751 | 3300006046 | Soil | MLKRIIGPLHEAREFWNRIETAVMIRSSAARSALRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEADVEQRRPGHVRTRE* |
Ga0075425_1008812392 | 3300006854 | Populus Rhizosphere | HDAQALWGRVEKAVTTKTSASTSSIRKQWRRSWARKVAGPWLKREVQIVAKVSGVVVVSLWLKRLVEQFLGRKILNEPVLRGEINDIVRGIEEDTEGRRSGHARTRE* |
Ga0075434_1003976061 | 3300006871 | Populus Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRTK* |
Ga0075424_1003307853 | 3300006904 | Populus Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSAATSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGIRRGEINDLVDGVEGNVEQRRSSHARTRK* |
Ga0075424_1007240942 | 3300006904 | Populus Rhizosphere | MKDIMHPLSDARSLWARIERAATAKSSAATSSIRKQWRRSWARKVAWPWLKREVEVISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSHARTRK* |
Ga0075424_1011856662 | 3300006904 | Populus Rhizosphere | MKHMHPLRVAQELWVRIEQALTARSSATTSSLRKQWRRSWVRKVAWPWLKREVEIISKVTGVVVISLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRSRK* |
Ga0075424_1025557132 | 3300006904 | Populus Rhizosphere | MKEIVRPLREALGLWRRVEGAVTTQSSAARSAVRKRWRRSWVRKTAWPWLKREAEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEGFEQRRPGHVRTRE* |
Ga0066710_1001319235 | 3300009012 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAIRKRWKRSWVRKTAWPWIKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHARTR |
Ga0066710_1002068316 | 3300009012 | Grasslands Soil | MKEIVRPLHAARELWRRIEGAATTQSSTARSSIRKRWKRSWAGKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE |
Ga0066710_1009748953 | 3300009012 | Grasslands Soil | VKESIQPLRDAREFWNRLEAAVTTQSSAARSSIRKRWKRSWVGKTAWPWLKREIEVVSKVAGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEKDVEQRRPGHVRTRE |
Ga0066710_1037203492 | 3300009012 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEADVEQRRPGHARTR |
Ga0066709_1018893572 | 3300009137 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFIGKKVLNEPVLRGELNDIVRGIEADVEQRRPGHARTRE* |
Ga0066709_1030222722 | 3300009137 | Grasslands Soil | VKAQPLPTNKEEAMKEIVRPLHAARELWRRIEGAATMQSSTARSSIRKRWKRSWAGKTAWPWLKREIEIVSKVTGVVVVSLWLKRFVEQFLGKKVLNEPVLRGEVNDIVRGIEAHVEQRRPGHVRTRE* |
Ga0114129_129734651 | 3300009147 | Populus Rhizosphere | IEQALTARSSATTSSLRKQWRRSWVRKVAWPWLKREVEIISKVTGVVVISLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRSRK* |
Ga0075423_110741671 | 3300009162 | Populus Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKNVLNEPVLRGEVNDIVRGIEDDV |
Ga0105241_122085802 | 3300009174 | Corn Rhizosphere | AGRAAPPHNRKEKRMKHIIHPLSDARSLSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0105248_107018902 | 3300009177 | Switchgrass Rhizosphere | MLAAGRAAPPHNRKEKRMKHIIHPLSDARSLSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0105237_112368702 | 3300009545 | Corn Rhizosphere | MLAAGRAAPPHNRKEKRMKHIIHPLSDARSLSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNGEQRRSSHAGTRK* |
Ga0105249_104278182 | 3300009553 | Switchgrass Rhizosphere | MHPLHDAQALWGRVEKAVTTKTSATTSSISKQWRRSWARKVACPWVKREVEIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDILRGIEDDAEGRRSGHARTRE* |
Ga0134071_103564552 | 3300010336 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSALRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0134122_116530832 | 3300010400 | Terrestrial Soil | MKHIIHPLSDARSPSSRLERTITVKSSATTSSIRKQWRRSWAKKVAWPWLKREVEIVARVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0137364_109852011 | 3300012198 | Vadose Zone Soil | APQPTSKEEEMLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0137364_111068161 | 3300012198 | Vadose Zone Soil | SKEEEMLKRIIDPLHEAREFWNRIETAVTTRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0137365_103301233 | 3300012201 | Vadose Zone Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0137370_105003742 | 3300012285 | Vadose Zone Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHARTRE* |
Ga0137372_102028193 | 3300012350 | Vadose Zone Soil | MQDAGEAQPLPTGKEEAMKEIVRPLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWAGKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0137366_106565532 | 3300012354 | Vadose Zone Soil | MKEIVRPLHAVRELWRRIEGAATTQSSTARSSIKKRWKRSWLRKTAWPWLKREIEIVCKVTGMVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0137371_103624642 | 3300012356 | Vadose Zone Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVCKVTGMVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0137373_111157331 | 3300012532 | Vadose Zone Soil | MVSRQPQPTSKEEEMLKRIISPLHEAREFWNRIETAVATQSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVND |
Ga0137404_100234347 | 3300012929 | Vadose Zone Soil | MKEIVRPLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWLRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0137404_106983761 | 3300012929 | Vadose Zone Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRVVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0137407_106490971 | 3300012930 | Vadose Zone Soil | MKRPISALHEARELWNRIETAVTTQSSAARSSIRKRWRRSWVRKTAWQWLKRELEIISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHARTRE* |
Ga0137407_113074771 | 3300012930 | Vadose Zone Soil | GKEEAMKEIVRPLHAARELWRRIEGAATTQSSTARSSIKKRWKRSWAGKTAWPWLKREIEIVSKVTGVVVVSLWLKRFVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE |
Ga0137407_114282222 | 3300012930 | Vadose Zone Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEADVEQRRPGHARTRE* |
Ga0137407_117683681 | 3300012930 | Vadose Zone Soil | VKPQPLPTGKEEAMKEIVRPLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWLRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE* |
Ga0137407_124387291 | 3300012930 | Vadose Zone Soil | KRIISPLHEAREFWNRIETAVMIRSSDARSAVRKRWRRSWLRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0134077_102225451 | 3300012972 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE* |
Ga0163162_110855532 | 3300013306 | Switchgrass Rhizosphere | MKHMMHPLSDARSLWARVEGAFTARSSAATSSIRKQWRRSWAKKVAWPWLKREVQIISKVSGVVAVSLWLKRLVEQFLGKKVFNEPVLRGEVNDIVRSIEDDVEERRRGNARTHK* |
Ga0163162_114916591 | 3300013306 | Switchgrass Rhizosphere | HPLSDARSLWARVEGAFTARSSAATSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0157375_110877602 | 3300013308 | Miscanthus Rhizosphere | LRRRWALVGHILQTEKEQHMKHMMHPLSDARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0157375_121813871 | 3300013308 | Miscanthus Rhizosphere | LSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK* |
Ga0157379_123011261 | 3300014968 | Switchgrass Rhizosphere | MKIMHPLHDAQALWGRVEKAVTTKTSATTSSISKQWRRSWARKVACPWVKREVEIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDILRGIEDDAEGRRSGHARTRE* |
Ga0157379_126442762 | 3300014968 | Switchgrass Rhizosphere | MKHMMHPLSDARSLWARVEGAFTARSSAATSSIRKQWRRSWARKVAWPWLKREVQIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0173483_102522762 | 3300015077 | Soil | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARRRK* |
Ga0137403_100648658 | 3300015264 | Vadose Zone Soil | VKPQPLPTGKEEAMKEIVRPLHAARELWRRIEGAVTMQSSTARSSIKKRWRRSWLRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRG |
Ga0132258_115368344 | 3300015371 | Arabidopsis Rhizosphere | MKIMHPLHDAQALWGRVEKAVTTKTSASTSSIRKQWRRSWARKVACPWIKREVKIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDGEERRRGNARTHK* |
Ga0132258_116936285 | 3300015371 | Arabidopsis Rhizosphere | WARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRTK* |
Ga0132258_134144702 | 3300015371 | Arabidopsis Rhizosphere | VTTKKKEKPMKHMHPLHDAQELWARIENAVTARSSATTSSIQKQWKRSWARKAAWPWFKREIEVISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVDKGRSHVRTKK* |
Ga0132258_136019243 | 3300015371 | Arabidopsis Rhizosphere | WARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKNVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK* |
Ga0132257_1014519962 | 3300015373 | Arabidopsis Rhizosphere | DARSFWARVQAAVNARSSAATSSIRKQWRRSWARRVGWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRTK* |
Ga0132257_1022565751 | 3300015373 | Arabidopsis Rhizosphere | PRRRYLGLFVHGRRWLVSGSAAEKHKEHHMKIMHPLNDARTHWARVERALTASSSTTTSSIRKQWKRSWAKKVAWPWLKREVQIISKVSGVVVVSLWPKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDGEERRRGNARTHK* |
Ga0132257_1030639391 | 3300015373 | Arabidopsis Rhizosphere | TTKHKERHMKIMHPLNDARTLWARVERAVTAKSSATTSSIRKQWKRSWSKKVAWPWIKREVEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEINDIVRGIEDDVEKGRTGHARTRE* |
Ga0132255_1025859322 | 3300015374 | Arabidopsis Rhizosphere | MKIMHPLHDAQALWGRVEKAVTTKTSASTSSIRKQWRRSWARKVAGPWLKREVQIVAKVSGVVVVSLWLKRLVEQFLGKKILNEPVLRGEINDIVRGIEEDAEGRRSGHDRTRE* |
Ga0132255_1053850561 | 3300015374 | Arabidopsis Rhizosphere | SLSDARSLWARVEGAFTARSSAATSSIRKQWRRSWAKKVAWPWLKREVQIISKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEERRRGNARTHK* |
Ga0182036_118688872 | 3300016270 | Soil | QMKHIMNPLSDARSLWAGIEKAVTAKSSSTTSSIRKQWKRSWARKVAWPWLKREVEVISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDEVEKGRSHHARTRD |
Ga0134112_101585152 | 3300017656 | Grasslands Soil | MLKRIIDPLHEAREFWNRIETAVMIRSSAARSAVRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDI |
Ga0066655_102869801 | 3300018431 | Grasslands Soil | MKDIIRPLHEARRLWGRIEAAVSTQSSAARLAIRRRWRRSWVRRTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE |
Ga0066667_108170092 | 3300018433 | Grasslands Soil | MLKRIIGPLQEAREFWNRIETVVETQSSAARSAVRKRWRRSWVRKTAWPWLKRETEIISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRG |
Ga0066669_104600582 | 3300018482 | Grasslands Soil | MKEIVRPLHEARELWNRIETAVTTQSSAARSSIRKRWRRSWVRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEQRRPGHVRTRE |
Ga0137408_12105347 | 3300019789 | Vadose Zone Soil | MKEIVRPLHAARELWRRIEGAATTQSSTARSSIKKRWKRSWAGKTAWPWLKREIEIVSKVTGVVVVSLWLKRFVEQFLGKKVLSEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE |
Ga0179594_101842311 | 3300020170 | Vadose Zone Soil | MKEIVRPLHAARELWRRIEGAATTQSSTARSSIKKRWKRSWAGKTAWPWLKRETEIIFKVTGVVVVSLWLKRLVEQFLGKKVLSEPVLRGEVNDIVRGIEEDVEQRRPGHVRTRE |
Ga0207710_100955931 | 3300025900 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHA |
Ga0207680_101083122 | 3300025903 | Switchgrass Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSAATSSIRKQWKRSWARKVAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEVILRGEINDLVDGVEGNVEQRRSSHAGTRK |
Ga0207654_107742192 | 3300025911 | Corn Rhizosphere | MKHIMHPLSDARSLWARVEGAFTARSSATTSSIRKQWKRSWARKVAWPWLKREVAVVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK |
Ga0207646_112723681 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MLKRIIDPLHEAREFWNRIETAVATQSSAARSAVRKRWRRSWVRKTAWPWIKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIE |
Ga0207706_104181971 | 3300025933 | Corn Rhizosphere | MHPLSDARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK |
Ga0207711_107406012 | 3300025941 | Switchgrass Rhizosphere | MKHIIHPLSDARSLSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK |
Ga0207668_108291611 | 3300025972 | Switchgrass Rhizosphere | STERRWSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK |
Ga0268266_115711781 | 3300028379 | Switchgrass Rhizosphere | TRSCWVKATHSTRSSMLAAGRAAPPHNRKEKRMKHIIHPLSDARSLSSRLERTITVKSSATTSSIRKQWRRSWAKKVALPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKRALNEGILRGEINDLVDGVEGNVEQRRSSHAGTRK |
Ga0268265_115957512 | 3300028380 | Switchgrass Rhizosphere | MKHMMHPLSDARSFWARIEGAVTAKSAAATSSISKQWRRSWTRKIAWPWLKREVEIVAKVSGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRLHARTRK |
Ga0307473_104961812 | 3300031820 | Hardwood Forest Soil | MKEIVRPLREALGLWRRVEGAVTTQSSAARSAVGKRWRRSWVRKTAWPWLKREAEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEGVEQRRPGHVRTSE |
Ga0306926_124176772 | 3300031954 | Soil | MKHIMHPLSDARSLWARVETAVTAKSSIATSSIRKQWKRSWTRKVALPWLKREVEVISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEDDVEKGRSRHVRTRQ |
Ga0307471_1009704092 | 3300032180 | Hardwood Forest Soil | MKEIVRPLHAARGLWRRIEGAVTTQSSTARSLIRKRWRRSWVRKTAWPWLKREIEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEENVEQRRPGHVRTRE |
Ga0307472_1002303812 | 3300032205 | Hardwood Forest Soil | MKEIVRPLHAARELWRRIEGAVTMQSSTARSSIRKRWKRSWLRKTAWPWLKRETEIVSKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEEGVEQRRPGHVRTSE |
Ga0307472_1022384011 | 3300032205 | Hardwood Forest Soil | RELWRRIEGAVTTQGSTARSLIRKRWRRSWVGKTAWPWLKREIEIISKVTGVVVVSLWLKRLVEQFLGKKVLNEPVLRGEVNDIVRGIEENVEQRRPGHVRTRE |
Ga0306920_1011404992 | 3300032261 | Soil | MNVIKHPLSDARSLWARIGGAINAETFAATSSIRKQWKRSWVRKDAWPWIKREIEIISKVTGVVVLSLWLKRLVEQFLGKKVLNEPVLRGEVNDLVRGIEDDVEKGRSRHVRRR |
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