Metagenome Family F091103

Basic Information
Family ID	F091103
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	97 residues
Representative Sequence	MVMTGMTDRIGAITMMIGGLMGRLGGERPFMIGWGAGSVCTTGLVIVLNIFLGTRKNLKRWLMHGFPMSSYFVGTLILIGWSQGNIVVHRQG
Number of Associated Samples	2
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (98.131 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13650	Asp_protease_2	24.30
PF03732	Retrotrans_gag	10.28
PF00078	RVT_1	1.87
PF00665	rve	0.93
PF00098	zf-CCHC	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.93
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.93
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.93
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	98.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	98.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	98.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	98.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.87%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100029793	3300014486	Root	MISMTDPIGAITMIIGDSMGRLGRGRQFMIGWGAGSVCLTGLVIVLDIFLGIGKSLKKWLMHEFPMSSYFAGTPIHIGWSQGNIIVHRQGGHHFPRGVKRG*
Ga0182004_100099119	3300014486	Root	MVMIDMTDPIGAIKMMIGDLMGRLGGEHQFMIDWGADSVYTIGLVIALNIFPGTRKSLKRWLMHEFPMSSYFVGTLILIGWSQGNVVAHWQGSHNFLHGVQRG*
Ga0182004_100189875	3300014486	Root	MVMIGMTDPIGAITMMIGDLMGRLGGERQFMISLGAGSVYTIGLVIVLNIFPGTKKSLKRWLMHEFPMSSYFAGMLILIGWSQGNIVVHRQGSHHFPHGVQRG*
Ga0182004_100242854	3300014486	Root	MINMTDPIGAITMMIGNLMGRLGGERQFMIGWGVDSVYTIALVIVFNIFLGIKKSLKRWQMHEFPMSSYFAGTLILIGWSQGNIVVHRQGSHLFPHGVQRG*
Ga0182004_100276506	3300014486	Root	MIGMIDLIGAITEMIGDLMGRLGGERQFMIGWGAGLVYMTGLVIALNIFPGTKKSLKKWPMREFSMSSYFAGTPILIGWS*
Ga0182004_100285123	3300014486	Root	MIGMTNPIGAITMMIADSIGRLGEEHPFMIGWGAGSVCTTGSVTVLSIFLGTRKNLKRWPMLEFPMSLYFAGMPILIGWSQGRIIAHR*
Ga0182004_100312734	3300014486	Root	MVMIDMTDPIDAIKMMIGDLMGRLGGERQIGWGADSVYTIGLVIVLNIFPGTKKSLKRWPMHEFSMSSYFVGTLILIGWSQGKVVTHR*
Ga0182004_100316525	3300014486	Root	MDMIGMTDPIDAIAMMIGGLMGRLVGERQFMIGWGADSVYTIGLVIVFNIFPKTKKNLKRWQMLGFPMSLYSAGMLIPIVSNQGNITVHQEGSHHFPRVVQKG*
Ga0182004_100339804	3300014486	Root	MIGMTDLIGSIRMMIGGLMGRLGGERQFMIGWGADSVCTTDLVIVSSIFPGTRRNLRRWPMHEFPMSLYFAETPIPIEWSQGKIVAHRRGSHNFLHGVQRG*
Ga0182004_100373682	3300014486	Root	MIGMTDQIGSIKTITIGLMGRLGEERRFMIGWGAGLACMIGLVTVLNTFPGTKKNLRRWLMHEFPMSSYFAGMPILIGWSQGKIVAHR*
Ga0182004_100429506	3300014486	Root	MVMIGMTDLIGAVKMMIDVLMGRLGEELQFMIGWEADSVYVTDLVTVSSIFPGTRKNLKRWPMHGFPMSSYFVGMLILIGCVDAKADLQTQRANTRFKR*
Ga0182004_100436454	3300014486	Root	MVMIGMTDQIGSIRTITAGLMGRLGGERQFMIGWGAGSVCMIGLVIVLSIFPETKKNLRRWLMHVSPMTSYFAGMPILIGWSQEKIVAHR*
Ga0182004_100471065	3300014486	Root	TDPTGAITVTIGDLMGRLGGERPFMIGWGADSVCMIGLVIVLNIFPGIRKSLRRWLVHEFLMSSYFAGTPIYIEWSQGNIIVHLRDSHPFPHGVQRG*
Ga0182004_100488552	3300014486	Root	MVMIGMTDPIGAIKIMIGDLMGRLGGGPQFMIGWGAGSVCMIGLVIVWRIFLGTRKNMKRWLTHGFPMSSNFVGMLILIGWSQGKIVAHRQGSHSFLHGVQRG*
Ga0182004_100503402	3300014486	Root	MAMIGMPGLIGAITTMIGGLMARLGGERQFMIGLEADSVYTIGLVIVFNIFLGIRKSLKRWQKHESPMSSYFAGMLVLIEWSQGNIVVHRQGSHHFPYGVQRG*
Ga0182004_100507252	3300014486	Root	MIDMTGPTGAITMMIGDLLGRLGGERQFMIGWGADSVRMTGLEIELNIFLGIRKSLRKWLMHGFSMSSYFAGTLTLIEWSQGKVVAHR*
Ga0182004_100508142	3300014486	Root	MIIGDLMGRLGGERQFMVAWGADSVCTTGLVIMLDIFLGIRKSLKRWLMHEFPMSSYFAGTPIHIGWSQGNIVVHREGSHRFPHGVQRG*
Ga0182004_100508672	3300014486	Root	MVMIGMTDPNGAITMMIGDLMGRLGGKRQFMIAWGAGSVYMIGLVLVLNIFPGTRKSLKRWQMLGFLMCSYFAGMLISIVSNQGNIVVHQQGSHRFPRGVRKG*
Ga0182004_100529641	3300014486	Root	MIGMTKTISAIRKMIGDLMSRQDGERQFMIGWGAGSVCTIGLVIVLNIFPRIGKSLKRWLMHEFPMSSYFAGTLILIGWSQENIVIHRPGSQY*
Ga0182004_100539823	3300014486	Root	MAMIGVTGLMGATMMMIGDLMGRLEGERQCMIGWEAGSVCTIGWVIMLNIFPGIGKNLKKWLMHEFPMSSYFAGMLILVGWSQENIVVHR*
Ga0182004_100608062	3300014486	Root	MIGMIDLIGAIMTTIGFLMGRLGGEHPFTIGWGAGSMCTTGSVIIFSIFPGTRKNLKRWLMHGFPISSSSAGMPILIGWSQENIITHR*
Ga0182004_100619663	3300014486	Root	MVMIGMIDLIGSIRMIIGGLMGRLGRERQFMIGWGADSACTTGLVIMLNVFLGTRKSLKRWPMHEFPMSSYFVGMLILIGWSQGKVITHRQGSHNFLHGVQRG*
Ga0182004_100666982	3300014486	Root	MVMIGMTDPIGAIMMIIGDLMGRLEGERQFMIDWGVDSVYTTGLVIVLNIFPGIRKSLKRWPMLEFPINSYSVETLILIGWSQEKVVAHRQGSHHFPHGVQRG*
Ga0182004_100674872	3300014486	Root	MVKIGMTDPISAIAMMIGDLMGRLGGEHPSMIGWGADSVCMIGLEIELNIFQGIKKSLRRWLMHGFPMSSYSIGMLTRIG*
Ga0182004_100706172	3300014486	Root	MIGDLVGRLGGELVFMIGWGARSMCMTDLVTVSDIFPRTKSSLKKWLMHEFPMSSYFAGMLIPIEWNQGKVVAHWQGSRNFLRGVQRV*
Ga0182004_100729952	3300014486	Root	MVTIGMTDQIRAITAGLMGRLGGERRFIIGWGADSVCMIGLEIELNIFLGTKKSLRRWLMHEFPMSLYFVGMPILIGWSQGKIIDHR*
Ga0182004_100744222	3300014486	Root	MVIIGMTDPIGAIKMMIGDLMGRLGGERQFMIDWGAGSVYMIGLVIVLNIFPETRKSLRRWLMLEFPMSSYFAGMLILIGWSQGNIVVHRQGSLHFPHGVLRG*
Ga0182004_100748053	3300014486	Root	MIDMTGLIGAITMMIGGLVGRLEEGCPFMTDWGAGSVRTTGLVIVFNIFPETRKSLKKWLMHGFPMSSYFAGMPTLIRWSQGKIIA*
Ga0182004_100787542	3300014486	Root	MVMIGMTDPISAIKMMIGDLMGRLGGDRQFMIGWGDSVYTIGLVIVLNIFPGTRKSLKRWLMHEFPMSSYFVGTLILIGWSQGKVVAHR*
Ga0182004_100797143	3300014486	Root	MVTIGMTDPISAITMIIGGLMGRSGGERQFMIDWGAGLVYMIGLVIVLNIFPGSRKSLKRWQMHEFLMSSYFAGMLILIGWSQGNIVVHRQGSHHFPHGVRRG*
Ga0182004_100853311	3300014486	Root	MVMIGMTDLIGAIITTIGGLMGRLGGEHPFTIGWGVGSVCPIGSAIMFTIFPGTRKNLKRWLMHGFPMSSFSAGTPILIGWSQGKIVAH
Ga0182004_100869733	3300014486	Root	MIGMTDPIDAITMMIGDLIGRLGEKRQFMIGWGADSVYTTGLVIALNIFLGTRKSLKIWLMHEFLMSSYSVGMLKLIGWSQGNIVVHRQGSHNFLHGVQRD*
Ga0182004_100873711	3300014486	Root	MVMIDMTDPIGAIMMMIGGLMGRLGGERQFMIGWGADSAYTIGLAIVFSIFLGIKKSLKRWQMLGFPMSSYFAGMLIPIVSNQGNILVHQQGSHHFPHGVQRG*
Ga0182004_100898761	3300014486	Root	KISNFPLSEIVLSATVMTGMTGPIGTIMIMIGDLTGRLGGEHPFMIGWGAGSVCTTGLGIVLNIFLGIKKNLKKWLMHGFPMSSYFAGMPTLIGWSRGKIVTQR*
Ga0182004_100916613	3300014486	Root	IGMTDPIGAITMMIGDSMGRLREERPFTIDWGAGSVCTIGLAIVLDIFPGTRKNLEKWIMLKFPMSSYFAGMPILIGWSQGKIIAHR*
Ga0182004_100921662	3300014486	Root	MVMIGMTDPIGAITMMIGDLMGRLGGERPFMIGWGVDSVRMIDLVIVLNIFLGIRRSLRRWLMHEFPMSSYFAGTPTHIGWSQGNIVVHRQGSHPFPHGVQRG*
Ga0182004_100925441	3300014486	Root	MVMIGMTDPIGAITMIIGDLIGQLWGERQIMIDWGVGTVYTTGSAIVLHIFPKTKKSSRRWLMHEFLMSSYSAGTPILIGWSQENIVVHRQGSHHFPHGVQRD*
Ga0182004_100927022	3300014486	Root	MVMIGMTDPIDAITMMIGDLMGRLGGKRPFMIGWGADSVYTIGLAIVLNTFPGIRMSLRRWLMHEFLMSSYFAGMLIPIGWSQGNVVVHRQGSHHFPLVSRRVNQDTEKETAT*
Ga0182004_100933172	3300014486	Root	IGMTDPIGAITMMIGDSMGRLREERPFTIDWGAGSVCTIGSAIVLDIFPGTGKNLKRWLILEFPMNSYFAGMPILIGWSQGKIIAQR*
Ga0182004_100953662	3300014486	Root	MIGMTDLIGAITMTIGDLMGRLGEERLSTIGWGVGSVCTIGSAVVLDISLGTRKNLKKWLMLGLPMSSYFAGMPILIGWSQGKIIAHR*
Ga0182004_100967792	3300014486	Root	MIGMTDPIGAITMIIGDLMGRLGGERQFMIDLGAGSVYTTGSAIVLHIFPKTKKSLRRWLMHEFPMSSYFAGTPIHIGWSQGNIVVHRQGSHPFPHGVQRG*
Ga0182004_100981083	3300014486	Root	LLSEIVLSAMVMIGMTDPTGAIAMMIGDSMGRLGGERPFMIGSGAGSVCMTGSVIVLNIFPETRKNLKRWLMRGFPMSLTSAGMPMLIVWSQGKIIIHW*
Ga0182004_100988491	3300014486	Root	MVKIDMTDQIGSIRTITAGLMGRLGGEHSFMIDWGAGSVCTTELVIVSNIFPRTKKNLKRWLMHEFPMSSYFAGMLILIGWSQGNIIVH
Ga0182004_100990483	3300014486	Root	ARSLSIAGSRILNYPLLEIALNAMVMIGMTDPIGSIMMTGSLVERLGGERQFMIGWGADSVYTIGLVIVFNIFPGIRKSLKSWQMHEFPMSSYFAGTLILIGWSQGNIVVHRQGSQHFLHGVRRG*
Ga0182004_100993061	3300014486	Root	MIGMTDPIGAITMTIGDLMGRLGEERPFMIGWGTDSAYMTGSVIASGIFPGTKKNLKKWLMLGFPMSSYSAGMPTLIKWSQGKIVAHR*
Ga0182004_101006191	3300014486	Root	MIGMTDPIGAITMMIGDLMGRLRGERPFMIGWGADLVCMIGLVIVLNIFPGIRKSLRRWLMHEFPMNSYFAGTLVLIEWSQGNTIVHRQGSRHFPHGVHRG*
Ga0182004_101011301	3300014486	Root	EIVLSAMVMIGMTDPTGAIAMMIGDSMGRLGGERPFMIGWGAGSVCMTGSTIVLNIFPGTRKNLKRWLMHGFPMSSSSAGTPILIGWTQGKIIVHR*
Ga0182004_101026212	3300014486	Root	MIGMTDLIAAITIMIGDLMGRLGGERQFMIGLGAGSVCMIGLVIVLNIFLGTRKSLKRWLMRVFRMSSYFAEMPILIGWSQGNIVVHQQGSHHFPHGV*
Ga0182004_101042232	3300014486	Root	MIGMTDPISAIAMMIGDLMGRLGEERPFMIDWGAGSVCMIGLAIVLNIFPGTRKNLKRWLMRGFPMSSSSAGMPILIGWSQGKIIAHR*
Ga0182004_101050492	3300014486	Root	MMIGDLMGRFGGERRFMIGLGAGSVLMIGLVIVLNIFPGTRKSLKRWLMRVFRMSSYFAEMPILIGWSQGNIVIHRQGSHHFPHGVQKG*
Ga0182004_101065723	3300014486	Root	VGRKISSFLLSEIVLSAMVMIGMTDPTDAIAMMIGDSMGRLGGKRPFMIDWGAGSVCTTGSVIVLNIFPGTRKNLKRWLMRGFPMSSSSAGTPILIGWSQGKIIAHR*
Ga0182004_101067712	3300014486	Root	MIGRIEPIDTIKTIIDGLMHRLGEEHQFMIGWGADSICMTGLVTVSNIFPGTRKSLKRWPMHEFPMSSYFVGMLIHIGWSQGKVVAHRQDSHNFLHGVQKG*
Ga0182004_101069293	3300014486	Root	MIGMTGPIGAITMIIGGLMGRLGEEHPFMIGWGAGSVCMTGLGIMLNIFPGTKKNFKKWLMHGFPMSSYFAGMLTLIGWSQGKIIAQR*
Ga0182004_101069352	3300014486	Root	IGGLMGRSGGERQFMIDWGAGSVYMIGLVIVLNIFPGTRKNLKRWLMPEFSMSSYFAGMLILIGWSQGNIAVHRQGSPHFPHGVLRG*
Ga0182004_101070502	3300014486	Root	MISMTRPIGAITMMIGDLMGRLGGERQFMIGLGVGSVCMIGLVIMLNVFPGTRKSLMRWLMRVFRMSSYFAAMSILIGWSQGNIIVCRQGSHHFPQGVQKG*
Ga0182004_101085111	3300014486	Root	MVVIGMTGLIGAVTMMIGDLMGRLGGERQFMIGFGAGSVCMIGLVIVLNIFPGTRKSLKRWLMRVFRMSSYFAEVPILIRWS*
Ga0182004_101085602	3300014486	Root	MVMTGMTDRIGAITMMIGGLMGRLGGERPFMIGWGAGSVCTTGLVIVLNIFLGTRKNLKRWLMHGFPMSSYFVGTLILIGWSQGNIVVHRQG
Ga0182004_101085642	3300014486	Root	MAMISTTDLIGSIRIKIGGLMGRLGGERQFMIGWGADSVYMIGLVIVLNIFLGTRKSLKKWPMHEFPMNSYFVETLILIGWSQGKVVTHRQGSHHFPHGVQRG*
Ga0182004_101085692	3300014486	Root	MVIIGMADLIGAIMITIGDLMGRLGGERRFMIGWGADSVYTIGLVIMLDIFPGIRKNLRRWLMHEFPMSSYFTGMLILIGWSRQNIVVHRQGSHHFPHGVQRD*
Ga0182004_101118742	3300014486	Root	MVMIDTTDAIGAIKMMTDDLMGRLGGERQFIIGWGADSVCTIGLVIVLIIFPGTRKSLKRWPMHEFPMSSYFVGTLILIGWSQGKVVTHRQGNHSFLDGVQRD*
Ga0182004_101146412	3300014486	Root	LSEIVLSAMVMIGMTDPTGAITMMIGDSMGRLGGERPFMIGWGASSVCTTGSAVVLDISPGTRKNLKKWLMLGFPVSLSSAGTPILIGWSQGKIIVHR*
Ga0182004_101188291	3300014486	Root	PNAMVMIGMIDLIGSIRMMIGGLMGRLGGERQFMIGWGADLLCTTGLVTVLNIFPGTRKSLKRWLMHEFPMSSYLVGMLILIGWS*
Ga0182004_101194142	3300014486	Root	EIVLNVTVMIGMTDPIGAITMTIGDSMDRLGGERPFMIGWGAGSVCIIGSAIVLNIFPETKKNLKRWLMHGFPMSSSSAGTPILIGWSQGKIIAHR*
Ga0182004_101197803	3300014486	Root	MIGMTDPIGVTMKMIGDLMGRLWGERPFMNGWGAGSVCTTGLAIVFNIFPGTRKNLKKWLMIGFLMSSYSAGMPTLIKWSQGKIVAHR*
Ga0182004_101223061	3300014486	Root	SSFLLSEIVLSAMVMIGMTDPTGAITMMIGDSMGRLGGERLFMIGWGAGSVCTTGSAVVLDISPGTRKNLKKWLMLGLPMSSYFAGMPILIGWSEGKIIVHR*
Ga0182004_101248962	3300014486	Root	MVMIGMTDLVDAITMMIGDLMGRLEGERLSTIGWGAGSVCTIGSAIVLDIFLGTGKNLKRWLMLEFPMSSYFAGMLILIGWSQGRIIAHR*
Ga0182004_101290082	3300014486	Root	MIGMIDPIGAITIMIGVSMGRLGGEHLFTIGWGAGSACTIGLAIVFNIFPGTKKSLKGWLMLGFPMSSYFAGMLIHIG*
Ga0182004_101295961	3300014486	Root	IGDSMGRLGGERPFTIGWGAGSACTTGSVIVLDIFPGTRKNMKRWLMLGFPMSSYFAGMPILIGWSQEKIVAHR*
Ga0182004_101297041	3300014486	Root	MTDQIGSIRTITAGLMGRLGEERRFMIGWGAGSACMIGLVIVLNTFPGTKQNWRRWLMRGFLMSSSSAGTPIPIGWSQGKIIAHR*
Ga0182004_101354842	3300014486	Root	MVMIGMIDPIGAITMMIGYLMGQLGGERQFMIGLGVGSVCMIGLVIVLNIFPGTKKSLKRWLMHEFPMSSYFVGTPILIGWS*
Ga0182004_101378351	3300014486	Root	EIVLSAMVMIGMTDPTGAIAMMIGDSMGRLGGERPFMIGWGAGSVCMTGSVIVLNIFPGTRKNLKRWLMRGFPMSSSSRGTPILIGWSQGKIIVHR*
Ga0182004_101472042	3300014486	Root	MIGMTDPIDAITMMIGGLMGRLGVEHPFMIGWGAGSVCTIGLVIALNIFPRTRKNLKRWLMHGFPMSSYFAGTLILIGWNRGNIVVHRQGSHHFP
Ga0182004_101514761	3300014486	Root	CPLLEIALNAMVMIGMTDPIDAITMMIGDLMGRLGGERQFMIGWGADSVCTIGLVIVFNIFPGIKKSLKRWRMLGFPMSSYFVGMLIPIVSNQGNIVVHQQGSHHFPRGVQRG*
Ga0182004_101534842	3300014486	Root	GIALSAMVMIGMTDLIGSIRMMIGDLMGRLGGERQFMIGWGVDLVYTIGLVIVFNIFLGTGKSLKRWPTHEFPMSSYFVGMLILIGWSQGKIVAHRQGSHNFLHGV*
Ga0182004_101596301	3300014486	Root	MIGMTGPIGATTMMIGGLMGRLEEGCPFMIDWGAGSVRMTGLAIVFNIFLGTRKSLKKWLMRGFPMSSFSAEMPILTGWSQGRIIAHR*
Ga0182004_101658752	3300014486	Root	GRRISSFLLSEIALSATVMIGMTDPIGAITMMIGDLMGRLGEGRPFMIDWGVGSVCTTGLVIVFNNFPGTRESLKRWLMRGFPMSSFSAEMPILIRWSQGRVVAHR*
Ga0182004_101661991	3300014486	Root	EIVLNVTVMIGMTDPIGAITMTIGDSMDRLGGERPFMIGWGAGSVCMTGSTIVLNIFPETRKNLKRWLMHGFPMNSSSAGTPILIGWSKGKSSTIGKAAATSSMVSRGVD*
Ga0182004_101679452	3300014486	Root	MVMIGMIDPIGAITMIIGDLMGRLEEERPFTIGWGADSTCMTDSVIASGIFPGTRKNLKKWLMLGFPMSSYSAGMPTLIKWSQ
Ga0182004_101693181	3300014486	Root	MVMIGMTDPIGAIMVMIGSLMGRLGGECQFMIGWGTDSAYMIGLAIVFNIFPGIKKSLKRWQMLGFPMSSYFAGMIIPIVSNQGNIVVHQQGSHHFPRGVQRG*
Ga0182004_101703751	3300014486	Root	MTGMTGPISTTMMMIGDLVGRLGGEHPFMIGWGAGLVCMIGLGIVLNIFLGNKKNLKKWLMHGFPMSSYFAGMLTLIGWSQGKIVDQR*
Ga0182004_101779542	3300014486	Root	MIGMTDPIGAITMMIGGLMGRLGGERQFMIGWGADSVYTIGLVIVFNIFLGTKKSLKRWQMLGFPMSLCFAGTLILIRWSQGNIVVHQQGSHHFPHGVQKG*
Ga0182004_101846532	3300014486	Root	TLNYPLLGIVLSAMVMIGMTEPIGAIRKMIGDLMGRLEGERRFKIGWGAGSVCMIGLVIVFNIFRETRRSLKRWQMHEFPMSSYFAGTLILIG*
Ga0182004_101890612	3300014486	Root	GTAHSLSIAGSRTSSCPLLGTALNAMVMIGMTDLIGSIRMMIGGLMGRLRGEGQFMIGWGADSVYTIGLVIVLNIFLGTRKSLKRWPMHEFPMSSYFVGMLILIGWSEGKFIAHRQGSHNFLHGVQRG*
Ga0182004_101891391	3300014486	Root	SSLLSATAHNVMVMIGMIDQIDSIRTITTGLIDRSGGERPFMIDWGAGSVCTIGWVIVLNIFLGIGKNLKRWLMHEFPMSSYFAGMLILIGWSQGNIIIHR*
Ga0182004_101905382	3300014486	Root	SSSIAGKRISSFQLSEIVLSATVMTGMTGPIGTIVIIIGDLMGRLGEEHLFMIGWGAGSVCTTGLEIVLNIFPGTRKNLKKWLMHGFPTSSYFAGMPTRIERNQGKIIVPRQGNSNFLHGVERG*
Ga0182004_101921981	3300014486	Root	VMIGMTDPTGAITMMIGDSMGRLGGERPFMIGWGAGSVCMTGSAVVLDISPGTRKNLKRWLMLGLPMSSYFAGMPILIGWSQEKIIVHR*
Ga0182004_101930192	3300014486	Root	RSSSIAGRRISSFLLSEIALSATVMIGMTDPIGAITMMIGGLIDRLGEGCPFMIDWGAGSVCTTGWAIVFNIFPGTRKSLKRWLMRGFPMSSFSAETPILIGWSQARVVAHR*
Ga0182004_101945232	3300014486	Root	LEIALNAMVMIGMTDPIGAITMMIGDLMGRLGGERPFMIGWGADLVCMIGLVIMLKIFPGIRKSLRRWLMHEFPMNSYFAVTLVLIEWSQGNTIVHRQGSHHFSHGVHRD*
Ga0182004_101954111	3300014486	Root	SSFLLSEIVLSAMVMISMTDPTGAIAMMIGDSMGRLGGERPLMIGWGAGSVCMTGSAIVLNIFPGTRKNLKRWLMRGFPMRSSSAGTPILIGWSQGKIIALR*
Ga0182004_101975032	3300014486	Root	SAMVMIGMTDPIGAITMIIGDLMGRLGGERQFMIDWGADSAYTAGLVITLNIFPGIRKSLKRWPMLEFPMNSYFVETLILIGWSQGKVVAHRQGSRHFPHGVQRG*
Ga0182004_102013771	3300014486	Root	AIMMMIGGLMGRSGGERQFMIDWGAGSVYMIGLVIVLNIFLGTRKNLKRWLMPEFPMSSYFAGMLILIGWSQGNIVVHRQGSLHFPHGVLWG*
Ga0182004_102049612	3300014486	Root	GRKISNFPLSEIVLSATVMTGMTGPIGTIVIMVGDLMGRLGGEHPFMIGWGAGSVCTIGLGIVLNIFPGTRKNSEKWLMHGFPMSSYFAGMPMLIGWSQGKVVAQR*
Ga0182004_102057421	3300014486	Root	MIGMTDPIGAITMMIGDLMGRLGGERQFMISLGAGSVCMIGLVIMLNIFPGTKKSLKRWLMHEFPMSSYFAGTPILIGWSQGNIVVHRQGSHHFPHGVQRG*
Ga0182004_102070891	3300014486	Root	FTVGRKISSFQLSEIVLSATVMTGMTGPTGTTMAMIGDLMGRLGGERLFTIGWGAGSACTTGLVIVFNIFPRTRKNSKKWLMHGFPISSYFAGMPIRIGWSRGKIIAQQQGSSSFLHGAPEGN*
Ga0182004_102109871	3300014486	Root	MVMIGMTDQIGGIRTITAGLMGRLGGERRFMIGWGAGSACMIGLVTVLNTFPGTKKNWRRWLMHGFPMSSYFAGTPILIGWSQGKIVVYR*
Ga0182004_102185572	3300014486	Root	IGMTDPTDAIAMMIGDSMGRFGGKRPFMIDWGAGSVCTTGSVIVLNIFPATRKNLKRWLMRGFPMSSSSAGTPILIGWSQGKIIAYR*
Ga0182004_102251091	3300014486	Root	VGVASLGACDILLGGMVISTDLIGSIKIMIGGLMGRLGGERQFMIGWGADSVYMIGLVIMLNIFSGTRKNLKKWPMHEFLMSSYFVETLILIGWSQGKVVAHRQGSHNFPHGVQRG*
Ga0182004_102360681	3300014486	Root	RLGGERQIMIGLGAGSVCMIGLVIVLNIFPETRKSLKRWLIRVFRMSSYFAEMSILIGLSQGNIVVHQQIGHHFPHGVRKG*
Ga0182004_102365961	3300014486	Root	MTDPIGAITMMIGGLMGRLGGEREFMIGLGAGSVCMIGLVIMSNIFPGTKKSLKRWLMHEFPMSLYFAGTPILIGWSQGNIVVHRQGSQHFPHGVQRG*
Ga0182004_102384891	3300014486	Root	AIMMTIGDLMGRLGGERPFTIDWGAGSVCTIGSAIVLDIFLGTEKNLNRWLMLEFPMSSYFAEMPILIGWSQWKIIAHR*
Ga0182004_102469082	3300014486	Root	MIGMTDPIGASTMMISDLMGRLGGERQFMIGLGAGSVCMIGLVIILNIFPGTKKSLKRWLMHEFPMSSYFVGTPILIEWSQGNIVVHRQGSH
Ga0182004_102565431	3300014486	Root	VGRKISNSLLSEIVLSATVMIGMTDPIGAITMMIGDSMGRLGGECPFMIDWGADSVCTTGSAIVLNIFPGTRKNLKRWLMHGFPMSSYSAGTPILTGWSQGKIIAHQ*
Ga0182004_102697041	3300014486	Root	MVMIRMTDPTGAITMMIDELMGRLGGERPFMIGWGAGSVCKIGLVIVLNIFPGIRKSLKRWLMHEFPMNSYFAEMLILIGWSQGNI
Ga0182004_102824282	3300014486	Root	VMIGMTDLVDAITMMIGDLMGPLEGECLSTIGWGAGSVCTIGSAIVLGISPGTRKNLKRWLMLRFPMSSYFAGMPILIGWSQGKIITHR*
Ga0182004_102833251	3300014486	Root	SSIAGRRISSFPLSEIVLSATVMIGMTDPIGAITMIIGGLMRRLGEECPFTIGWGAGSAYTTGSVIALDIFPETRKNLKKWLMLGFPMSSYFAGMPILTEWSRGKVVAHR*
Ga0182007_102705081	3300015262	Rhizosphere	MVMIGMTDPIYAIMMMIGDLMGRLGGERPFMIGWGADSVYTIGLVIVLNIFPGTKKSLKRWPMHEFSMSSYFAGTPILIGWSQGNIVVHRQGSHHFPHGVQRG*
Ga0182007_103615891	3300015262	Rhizosphere	GIAHSSSTVGRKISSFLLSEIVLSAMVMIGMTDLIGAITMTIGDLMGRLGEERLSTIGWGAGSVCTIGSAVVLDISLGTRKNLKKWLMLGLPMSSYFAGMPILIG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091103

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences