NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091067

Metagenome Family F091067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091067
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 129 residues
Representative Sequence MVISTLVSSACTGIRGDHAGPVISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNSSESPHDDSIQFLPCVNN
Number of Associated Samples 80
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 45.37 %
% of genes near scaffold ends (potentially truncated) 51.85 %
% of genes from short scaffolds (< 2000 bps) 89.81 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (60.185 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(12.037 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.074 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.55%    β-sheet: 40.76%    Coil/Unstructured: 56.69%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.1.18.11: E set domainsd3ugua23ugu0.72
b.1.18.0: E set domainsd5z0ua15z0u0.72
b.1.29.4: Macroglobulind2a73a32a730.71
b.1.2.0: Fibronectin type IIId2doca12doc0.71
b.1.29.4: Macroglobulind3cu7a33cu70.71

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01872RibD_C 8.33
PF13088BNR_2 5.56
PF01636APH 2.78
PF04075F420H2_quin_red 1.85
PF03301Trp_dioxygenase 1.85
PF00664ABC_membrane 0.93
PF07883Cupin_2 0.93
PF01152Bac_globin 0.93
PF12697Abhydrolase_6 0.93
PF00923TAL_FSA 0.93
PF028262-Hacid_dh_C 0.93
PF01569PAP2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 8.33
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 8.33
COG3483Tryptophan 2,3-dioxygenase (vermilion)Amino acid transport and metabolism [E] 1.85
COG0176Transaldolase/fructose-6-phosphate aldolaseCarbohydrate transport and metabolism [G] 0.93
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms60.19 %
UnclassifiedrootN/A39.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886006|SwRhRL3b_contig_23815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12946Open in IMG/M
2162886006|SwRhRL3b_contig_360022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_121001Open in IMG/M
2162886007|SwRhRL2b_contig_1319200All Organisms → cellular organisms → Bacteria → Terrabacteria group2199Open in IMG/M
3300003319|soilL2_10027688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1359Open in IMG/M
3300003324|soilH2_10008269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3369Open in IMG/M
3300004114|Ga0062593_101602697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium706Open in IMG/M
3300004114|Ga0062593_102713862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus564Open in IMG/M
3300004156|Ga0062589_100253122All Organisms → cellular organisms → Bacteria → Terrabacteria group1322Open in IMG/M
3300004157|Ga0062590_101622860Not Available655Open in IMG/M
3300004480|Ga0062592_101732725Not Available609Open in IMG/M
3300004480|Ga0062592_102293262All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300004643|Ga0062591_101580847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus659Open in IMG/M
3300004643|Ga0062591_101879073Not Available613Open in IMG/M
3300004643|Ga0062591_102552362All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300004782|Ga0062382_10153587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium975Open in IMG/M
3300005289|Ga0065704_10072244All Organisms → cellular organisms → Bacteria8885Open in IMG/M
3300005289|Ga0065704_10175498All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300005294|Ga0065705_10172428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1662Open in IMG/M
3300005294|Ga0065705_10568225Not Available710Open in IMG/M
3300005294|Ga0065705_10880329Not Available582Open in IMG/M
3300005295|Ga0065707_10806612Not Available591Open in IMG/M
3300005440|Ga0070705_100919404All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005444|Ga0070694_100781018Not Available782Open in IMG/M
3300005457|Ga0070662_100847600All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005467|Ga0070706_100501300All Organisms → cellular organisms → Bacteria → Terrabacteria group1130Open in IMG/M
3300005468|Ga0070707_101310243All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005471|Ga0070698_100098246All Organisms → cellular organisms → Bacteria2902Open in IMG/M
3300005471|Ga0070698_100136755All Organisms → cellular organisms → Bacteria → Terrabacteria group2404Open in IMG/M
3300005518|Ga0070699_100531578All Organisms → cellular organisms → Bacteria → Terrabacteria group1069Open in IMG/M
3300005545|Ga0070695_100232802Not Available1333Open in IMG/M
3300005549|Ga0070704_100146578All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300005549|Ga0070704_100804249All Organisms → cellular organisms → Bacteria → Terrabacteria group840Open in IMG/M
3300005577|Ga0068857_100846305All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300005577|Ga0068857_102275212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Caloramator → Caloramator australicus532Open in IMG/M
3300005615|Ga0070702_100737306Not Available755Open in IMG/M
3300005829|Ga0074479_10108537All Organisms → cellular organisms → Bacteria6822Open in IMG/M
3300005833|Ga0074472_11419005Not Available702Open in IMG/M
3300005840|Ga0068870_11126597Not Available565Open in IMG/M
3300005874|Ga0075288_1006444All Organisms → cellular organisms → Bacteria → Terrabacteria group1508Open in IMG/M
3300005879|Ga0075295_1052231All Organisms → cellular organisms → Bacteria → Terrabacteria group554Open in IMG/M
3300005887|Ga0075292_1024790Not Available805Open in IMG/M
3300005888|Ga0075289_1072290Not Available562Open in IMG/M
3300005889|Ga0075290_1031616All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300006852|Ga0075433_10229999All Organisms → cellular organisms → Bacteria1647Open in IMG/M
3300006852|Ga0075433_10287695All Organisms → cellular organisms → Bacteria → Terrabacteria group1456Open in IMG/M
3300006871|Ga0075434_102284668All Organisms → cellular organisms → Bacteria → Terrabacteria group544Open in IMG/M
3300006969|Ga0075419_10699051Not Available719Open in IMG/M
3300009093|Ga0105240_12542818Not Available529Open in IMG/M
3300009100|Ga0075418_11662287Not Available694Open in IMG/M
3300009147|Ga0114129_11560282All Organisms → cellular organisms → Bacteria → Terrabacteria group809Open in IMG/M
3300009148|Ga0105243_10041323All Organisms → cellular organisms → Bacteria3606Open in IMG/M
3300009162|Ga0075423_12019393Not Available624Open in IMG/M
3300009176|Ga0105242_11542871Not Available696Open in IMG/M
3300009506|Ga0118657_11051476All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300009553|Ga0105249_11337900All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300009553|Ga0105249_11854244Not Available676Open in IMG/M
3300009553|Ga0105249_12804963Not Available559Open in IMG/M
3300010038|Ga0126315_10286845Not Available1013Open in IMG/M
3300010038|Ga0126315_10357048All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300010038|Ga0126315_10373128All Organisms → cellular organisms → Bacteria → Terrabacteria group892Open in IMG/M
3300010041|Ga0126312_10145115All Organisms → cellular organisms → Bacteria → Terrabacteria group1645Open in IMG/M
3300010041|Ga0126312_10253559All Organisms → cellular organisms → Bacteria → Terrabacteria group1236Open in IMG/M
3300010042|Ga0126314_10442516Not Available939Open in IMG/M
3300010042|Ga0126314_10792435Not Available697Open in IMG/M
3300010044|Ga0126310_10237105All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300010044|Ga0126310_10452111All Organisms → cellular organisms → Bacteria → Terrabacteria group927Open in IMG/M
3300010045|Ga0126311_10138505Not Available1720Open in IMG/M
3300010045|Ga0126311_10509334All Organisms → cellular organisms → Bacteria → Terrabacteria group942Open in IMG/M
3300010045|Ga0126311_11179003Not Available633Open in IMG/M
3300010166|Ga0126306_10047842All Organisms → cellular organisms → Bacteria2951Open in IMG/M
3300010399|Ga0134127_10735969All Organisms → cellular organisms → Bacteria → Terrabacteria group1029Open in IMG/M
3300010399|Ga0134127_10749778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter1021Open in IMG/M
3300010400|Ga0134122_10900630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Oculatellaceae → Oculatella → unclassified Oculatella → Oculatella sp. FACHB-28856Open in IMG/M
3300010403|Ga0134123_12704146Not Available564Open in IMG/M
3300011119|Ga0105246_10079949All Organisms → cellular organisms → Bacteria → Terrabacteria group2326Open in IMG/M
3300011119|Ga0105246_11005503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium755Open in IMG/M
3300011431|Ga0137438_1068308Not Available1066Open in IMG/M
3300011431|Ga0137438_1198667Not Available611Open in IMG/M
3300011431|Ga0137438_1214361Not Available583Open in IMG/M
3300012353|Ga0137367_10167285All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300012938|Ga0162651_100037382Not Available732Open in IMG/M
3300014301|Ga0075323_1085328Not Available661Open in IMG/M
3300014325|Ga0163163_12607618Not Available563Open in IMG/M
3300015371|Ga0132258_11061578Not Available2047Open in IMG/M
3300015371|Ga0132258_13328338Not Available1105Open in IMG/M
3300015372|Ga0132256_103443667Not Available532Open in IMG/M
3300015374|Ga0132255_100465586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1852Open in IMG/M
3300025922|Ga0207646_10262259All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300025925|Ga0207650_11860431Not Available509Open in IMG/M
3300025934|Ga0207686_11428969Not Available570Open in IMG/M
3300025961|Ga0207712_10700594All Organisms → cellular organisms → Bacteria → Terrabacteria group884Open in IMG/M
3300026003|Ga0208284_1012565All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300026075|Ga0207708_10017582All Organisms → cellular organisms → Bacteria5383Open in IMG/M
3300026116|Ga0207674_11041230Not Available788Open in IMG/M
3300026118|Ga0207675_100568546All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300027163|Ga0209878_1022009All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300027840|Ga0209683_10290001All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300027873|Ga0209814_10100613All Organisms → cellular organisms → Bacteria → Terrabacteria group1226Open in IMG/M
(restricted) 3300031197|Ga0255310_10110140Not Available744Open in IMG/M
3300031873|Ga0315297_11120835Not Available647Open in IMG/M
3300031997|Ga0315278_11015463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300031997|Ga0315278_11756128Not Available588Open in IMG/M
3300032164|Ga0315283_10356381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1590Open in IMG/M
3300032173|Ga0315268_10656341Not Available1044Open in IMG/M
3300032275|Ga0315270_11144615Not Available518Open in IMG/M
3300032397|Ga0315287_10299871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana1893Open in IMG/M
3300032397|Ga0315287_10590563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1316Open in IMG/M
3300032516|Ga0315273_10759799All Organisms → cellular organisms → Bacteria1267Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil12.04%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.04%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil8.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.41%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere5.56%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil5.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.70%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere2.78%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.78%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.85%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.85%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.85%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.93%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.93%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886006Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005887Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026003Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027163Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL3b_0498.000005002162886006Switchgrass RhizosphereMKRLFQTAVFLFFTTFTLPACTWIPGDHKAPTISDVSISDKVVVISDCPATSVTVSAKVVDTSKIKSVVLWYRVGSDQPFASIHMDLHSGVYIATIQGADLQGHGYGAVEFYISAEDREGNSSKSPPDNSIQFLPCVNN
SwRhRL3b_0778.000012102162886006Switchgrass RhizosphereMKRLFQTAVFLFFITFTLPACTWIPGDHKAPTISDVSISDKVVVISDCPATSVTVSAKVVDTSKIKSVVLWYRVGSDQPFASIHMDLHSGVYIATIQGADLQGHGYGAVEFYISAEDREGNSSKSPPDNSIQFLPCVNN
SwRhRL2b_0698.000009302162886007Switchgrass RhizosphereMKSFGGTTTILFGIALILSACAGVRGDHTGPVISDISTSDKVVVISDCLSTSVTITARVSDASNIKSVLLWLRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGAMDFYITAEDGKGNKSESPHDTSVQFLPCVNN
soilL2_1002768823300003319Sugarcane Root And Bulk SoilMKGLIQTATILLGLAFILSACDNRPADQTGPVISDISTSDKVVVISDCLSTSVTITAKVTDASNVKSVRLWYRVGSDQPFASSTMDQQKDIYAVKIKGADLQGHGYGAMEFYITAEDEVGNTSESPHDESVQFLPCVNN*
soilH2_1000826953300003324Sugarcane Root And Bulk SoilMKGLIHTATILLGLAFILSACDNRPADQTGPVISDISTSDKVVVISDCLSTSVTITAKVTDASNVKSVRLWYRVGSDQPFASSTMDQQKDIYAVKIKGADLQGHGYGAMEFYITAEDEVGNTSESPHDESVQFLPCVNN*
Ga0062593_10160269713300004114SoilMKGFVRTILFGVAFILSACAGIQRDQAGPVISDISTSDKVVVISDCLSTSVTITAKVTDESNVKSVLLLYRVGSDQPFASSNMNLQNDIYAAKIKGADLQGHGYGAMEFYITAEDERG
Ga0062593_10271386213300004114SoilMNYLARLVALVTISFLLTSACVKMKSDLSGPDITDISTSGKVLVISDCQADSMTITAKVNDQSTVENVFLWYRVGSDQPFSFIDMEMKNERYAATLKGSDVQGHGYGAMEFYITAEDGEGNTSESQHDESIQFLPCVNS*
Ga0062589_10025312213300004156SoilSTSDKVVVISDCLSTSVTITAKVTDESNVKSVLLLYRVGSDQPFASSNMNLQNDIYAAKIKGADLQGHGYGAMEFYITAEDERGNKSESPHDDSVQFLPCVNN*
Ga0062590_10162286013300004157SoilFGVAFILSACAGIQRDQAGPVISDISTSDKVVVISDCLSTSVTITAKVTDESNVKSVLLLYRVGSDQPFASSNMNLQNDIYAAKIKGADLQGHGYGATEFYITAEDERGNKSESPRDDSVQFLPCVNN*
Ga0062592_10173272513300004480SoilDCLATSVTISARVTDKSKITHVLLWYRVGSDGPYTSTDMEIQSGLYTASLKGADLQGHAYGAMEFYITAEDAEGNASETPHDNSIQFLPCVNN*
Ga0062592_10229326213300004480SoilMKGFVRAILIGVAFILSACAAIQRDQAGPVISDISTSDKVVVISDCLSTSVTITAKVTDESNVKSVLLLYRVGSDQPFASSNMNLQNDIYAAKIKGADLQGHGYGAMEFYITAED
Ga0062591_10158084713300004643SoilLVTISFLLTSACVKMKSDLSGPDITDISTSGKVLVISDCQADSMTITAKVTDQSIVENVFLWYRVGSDQPFSFIDMEMKNERYAATLKGSDVQGHGYGAMEFYITAEDGEGNTSESQHDESIQFLPCVNS*
Ga0062591_10187907313300004643SoilRKGKQMKGFVRAILFGVAFILSACAGIQRDQAGPVISDISTSDKVVVISDCLSTSVTITAKVTDESNIKSVLLLYRVGSDQPFASSNMNLQNDIYAAKIKGADLQGHGYGAMEFYITAEDERGNKSESPHDDSVQFLPCVNN*
Ga0062591_10255236213300004643SoilMIRWLFGITFLLSACATIRADHTGPVISDISTSDKVVVISDCLTTSVTITAKVTDASNIKSVLLWYRVGSDQPFASSNMNLQDDIWAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHD
Ga0062382_1015358723300004782Wetland SedimentMKGFVGTTTILFGIALIVSACAGLQKDQAGPAISDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWVRVGTDGPFASSNMNLQNGNYTAKVRGSDLQGHGYGAMEFYITAEDGKGNKSESPHDDSVQFLPCVNN*
Ga0065704_10072244113300005289Switchgrass RhizosphereMKSFGGTTTILFGIALILSACAGVRGDHTGPVISDISTSDKVVVISDCLSTSVTITARVSDASNIKSVLLWLRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGAMDFYITAEDGKGNKSESPHDTSVQFLPCVNN*
Ga0065704_1017549823300005289Switchgrass RhizosphereMKHSVQSSIYRDFRVIKNSEVCFRRAWHTCYTVFATVVLSTSSISEMKRSFLQTILLGSLLVSCARIQGDHPGPTISDISTSDKVVVISDCLATSVTITAKVTDVSNVKSVLLWYRVGSDQPFASSNMNLQNDIYAATVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0065705_1017242823300005294Switchgrass RhizosphereMKSFGGTATILFGIALILSACAGVRGDHTGPVISDISTSDKVVVISDCLSTSVTITARVSDASNIKSVLLWLRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGAMDFYITAEDGKGNKSESPHDTSVQFLPCVNN*
Ga0065705_1056822523300005294Switchgrass RhizosphereDISTSDKVVVISDCLATSVTITAKVTDVSNVKSVLLWYRVGSDQPFVSSNMDLQNCMYTAKVKGSDLQGHGYGAMEFYITAEDEAGNSSKSSLDNSIQFLPCVNN*
Ga0065705_1088032923300005294Switchgrass RhizosphereMKRSFLQTILLGSLLVSCARIQGDHPGPTISDISTSDKVVVISDCLATSVTITAKVTDVSNVKSVLLWYRVGSDQPFASSNMNLQNDIYAATVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0065707_1080661213300005295Switchgrass RhizosphereTISDISTSDKVVVISDCLATSVTITAKVTDVSNVKSVLLWYRVGSDQPFVSSNMDLQNGMYTAKVKGSDLQGHGYGAMEFYITAEDEAGNSSKSSLDNSIQFLPCVNN*
Ga0070705_10091940423300005440Corn, Switchgrass And Miscanthus RhizosphereDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITADDGEGNRSESPHDDSIQFLPCVNS*
Ga0070694_10078101813300005444Corn, Switchgrass And Miscanthus RhizosphereMKCLIRSVALMVISTLVSSACTDIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTFTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDEAGNKSESRHDDSVQFLPCVNN*
Ga0070662_10084760013300005457Corn RhizosphereGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNIASVLLWYRVGPDQPFTFTNMDMQSELYTASVQGSDVQGHGYGAMEFYITAEDGEGNRSDSPHDDSIQFLPCVNS*
Ga0070706_10050130013300005467Corn, Switchgrass And Miscanthus RhizosphereMKSFVGTVMLLLGIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLFWVRVGSDGPFASSNMNLQNGLYAVKVKGADLQGHGYGTIDFYITAEDGKGNKSESPHDDSIQFLPCVNN*
Ga0070707_10131024323300005468Corn, Switchgrass And Miscanthus RhizosphereMKSFVGTVMLLLGIAWILSACAGSRGDHTGPAISDISTSDKVVVISDCLATSVTITAKVTDASNVISVLLWVRVGTDGPFASSNMNLQNGIYTAKVKGSELQGHGYGAMEFYITAEDGKGNKSESPHDDS
Ga0070698_10009824613300005471Corn, Switchgrass And Miscanthus RhizospherePVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGPDGPFASSNMNLQNGLYAAKVKGADLQGHGYGTIDFYITAEDGKGNKSESPHDDSIQFLPCVNN*
Ga0070698_10013675533300005471Corn, Switchgrass And Miscanthus RhizospherePVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLFWVRVGSDGPFASSNMNLQNGLYAVKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0070699_10053157813300005518Corn, Switchgrass And Miscanthus RhizosphereMKSFVGTVMLLLGIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGTIDFYITAEDGKGNKSESPHDDSIQFLPCVNN*
Ga0070695_10023280213300005545Corn, Switchgrass And Miscanthus RhizosphereMKCLVRSVALMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVMDASNITRVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNSSESPHDDSIQFLPCVNS*
Ga0070704_10014657823300005549Corn, Switchgrass And Miscanthus RhizosphereMKCLVRSVALMVISTLVSSACTDIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAVDGEGNRSESPHDDSIQFLPCVNS*
Ga0070704_10080424913300005549Corn, Switchgrass And Miscanthus RhizosphereTSDKVVVISDCLATSVTITAKVTDASNVISVLLWVRVGTDGPFASSNMNLQNGIYTAKVKGSELQGHGYGAMEFYITAEDGKGNKSESPHDDSVQFLPCVNN*
Ga0068857_10084630523300005577Corn RhizosphereMMTSCARIPGDHTGPAIDDISTSDQVVVISDCPSTSVTITAKVTDESNITSVLLWYRVGTDKTFTFTKMDKQNSVYAATVEGSQLQGHGYGAIEFYITAEDEVGNSSKSSIDNSIQFLPCVNN*
Ga0068857_10227521213300005577Corn RhizosphereVLMVISMLVLSACGRVQSDLSGPSISDISTSGKVLVISDCPSTSVTITAKVTDKSKITHVLLWYRIGADRSFASINMDIQNDVYTAVMNGPDLQGHGYGAIEFYITAEDAQGNMSESPHVDRLEFLPCVN
Ga0070702_10073730613300005615Corn, Switchgrass And Miscanthus RhizosphereMKCLVRIVALMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITADDGEGNRSESPHDDSIQFLPCVNS*
Ga0074479_1010853723300005829Sediment (Intertidal)MKSRILITLIFIITLLLPACEGGSSDKAGPIISDISTSGKVVVISDCPATSVTITAKVTDASKITSALLWVRVGSDQPFASINMEAHEDLYSASVKGADLQGNGYGAMEFYITADDQEGNRAKSPLDNSIQFLPCVSN*
Ga0074472_1141900513300005833Sediment (Intertidal)MEEKNMKFQVQFAVFIVMSIFLLLACKGIPLDRTGPDIRDINTSGKVVVISDCLATSVTITAKVTDDSRITNVRLWVRVGSDQAFTPIGMDSQGGLYTVSVKGSSLQGNGYGTLEFYITAQDGADNSSKSPIDKSIQFLPCVSN*
Ga0068870_1112659713300005840Miscanthus RhizosphereKPSLLQTILLGFMMTSCARIQGDHTGPAIDDISTSDQVVVISDCPSTSVTITAKVTDESNIISVLLWYRVGTDKSFTFTKMDKQNSVYAATVEGSQLQGHGYGAIEFYITAEDEVGNSSKSSIDNSIQFLPCVNN*
Ga0075288_100644413300005874Rice Paddy SoilFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTSVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIYITAEDEKGNKSESPHDDSVQFLPCVNN*
Ga0075295_105223113300005879Rice Paddy SoilMKSFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTSVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIY
Ga0075292_102479013300005887Rice Paddy SoilMKSFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTCVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIYITAEDEKGNKSESPHDDSVQFLPCVNN*
Ga0075289_107229013300005888Rice Paddy SoilMKSFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTSVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIYITAEDEKGNKSESPHDDSVQFLPCVNN*
Ga0075290_103161613300005889Rice Paddy SoilMKSFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTSVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIYITAEDEKGNKSESPHDDSVQF
Ga0075433_1022999923300006852Populus RhizosphereMIRWLFGITFLLSACAAIRADHTGPVISDISTSDKVVVISDCLTTSVTITAKVTDASNIKSVLLWYRVGSDQPFASSNMNLQDDIWAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0075433_1028769523300006852Populus RhizosphereMKSFVGTVMLLLGIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDQPFASSNMNLQNDIYAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0075434_10228466813300006871Populus RhizosphereMIRWLFGITFLLSACAAIRADHTGPVISDISTSDKVVVISDCLTTSVTITAKVTDASNIKSVLLWYRVGSDQPFASSNMNLKDDIWAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCV
Ga0075419_1069905123300006969Populus RhizosphereMKSFVGTVMLLLGIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDQPFASSNMNLQNDIYAAKVKGADLQGHGYGAMECYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0105240_1254281813300009093Corn RhizosphereALMVISTLVSSACTDIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVMDASNITRVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNRSESPHDDSIQFLPCVNS*
Ga0075418_1166228713300009100Populus RhizosphereVVLSTSSISEMKRSFLQTILLGSLLVSCASIQGDHTGPTISDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWYRVGSDQPFVSSNMNLQNDIYAATVKGADLQGHGYGAMEFYITAEDEAGNSSKSSLDNSIQFLPCVNN*
Ga0114129_1156028213300009147Populus RhizosphereISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGTIDFYITAEDGKGNKSESPHDDSIQFLPCVNN*
Ga0105243_1004132323300009148Miscanthus RhizosphereMVISTLVSSACTGIRGDHAGPVISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNSSESPHDDSIQFLPCVNN*
Ga0075423_1201939323300009162Populus RhizosphereMVIGFARMIRWLFGITFLLSACAAIRADHTGPVISDISTSDKVVVISDCLTTSVTITAKVTDASNIKSVLLWYRVGSDQPFASSNMNLQDDIWAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0105242_1154287123300009176Miscanthus RhizosphereMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVMDASNITRVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNRSESPHDDSIQFLPCVNS*
Ga0118657_1105147623300009506Mangrove SedimentLKHKFPVILVLSVFLLSACEANRNDHVGPVISDVSTSDKVLVISDCPATSVTISARVVDTSKIASVLLWYRVDSGEPYASTPMEAQTGLYSASVKGSDLQGNGYGSLEFYITAEDERGNSSKSAVDTSIQFLPCVNN*
Ga0105249_1133790023300009553Switchgrass RhizosphereMKCLVQIVALITISIIVSSACGMIRSDLSGPSISDISTSGKVLVISDCPSTSVTISAKVTDKSKIIHVLLWYHIGADKSFASINMEMQSDIYTAVMNGADLQGHAYGTIEFYITAEDAQGNTSESPHDDSLEFLPCVNN*
Ga0105249_1185424413300009553Switchgrass RhizosphereMVVLMVISTLVLSACGGIQSDQTDPMISDISTSGKVVVISDCLATSVTISARVTDKSKITHVLLWYRVGSDGPYTSTDMEIQSGLYTASLKGADLQGNGYGAIEFYITAEDAEGNASETPHDNSIQFLPCVNN*
Ga0105249_1280496313300009553Switchgrass RhizospherePAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGSDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITADDGEGNRSESPHDDSIQFLPCVNS*
Ga0126315_1028684523300010038Serpentine SoilMIIISIILVAACKRAKSDLTDPVIRDISISSNVLVISDCQADSVTITARVINESRITQVLLWYRVGADQPFFSSTMKLQNGIYAANVQGSELQGHGYGAMEFYITAEDESGNSSKSPVDNSIQFLPCVNN*
Ga0126315_1035704823300010038Serpentine SoilAASACKGIQNDTAGPSIGDVSTSDKVVVISDCPAMAVTISAHVTDESNVTSVVLRYRVGADGPFASTAMATQNDKYTAAVEGSDLQGHGYGDLEFYITAEDDTGNFSKSPVDKSIQFLPCVNN*
Ga0126315_1037312823300010038Serpentine SoilDKVVVISDCLATSVTITAKVTDASNVKSVLLWVRVGSDQPFASSNMNLQNDLYATKIKGADLQGHGYGAMEFYITAEDKEGNSSKSPVDNSIQFLPCVNN*
Ga0126312_1014511523300010041Serpentine SoilMKCLVRIGALMLLSTLVSSACGRLQSDLSGPTISDISTSGKVLVISDCPATSVTITARVTDESKITHVLLWHRIGSDQSFVFTTMNMQNDLYVATVKGADVQGHGYGAMEFYITAEDREGNTSESPHEDSIQFLPCVNN*
Ga0126312_1025355923300010041Serpentine SoilDISTSDKVVVISDCQNTEVTITARVTGDSKITRVIVWYRVDSDQSFLSTNMNLRNGLYSATIQGSEFLGHRYGSMEFYITAEDGEGNTSESPHDDSIQFLPCVNN*
Ga0126314_1044251623300010042Serpentine SoilKGKKMKGSVRAILFSIALILSACAGLQKDHTGPVISDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWVRVGSDQPFASSNMNLQNDLYAAKVKGADLQGHGYGAMEFYITAEDEDGNSSKSPGDNSIQFLPCVNN*
Ga0126314_1079243513300010042Serpentine SoilQAILNLLIRLIQPEKNMKKLSQVAALIVLSTFAASACKGIQNDTAGPSIGDVSTSDKVVVISDCPAMAVTISAHVTDESNVTSVVLRYRVGADGPFASTAMATQNDKYTAAVEGSDLQGHGYGNLEFYITAEDDAGNFSKSPVDKSIQFLPCVNN*
Ga0126310_1023710523300010044Serpentine SoilMIIISIILVAACKRAKSDLTDPVIRDISISSNVLVISDCQADSVTITARVIDESRITQVLLWYRVGADQPFTSDNMHPQCDQYSGTVKGSEFLGRGYGAMEFYITAQDEQGNISESPHDDSIQFLPCVSN*
Ga0126310_1045211113300010044Serpentine SoilQICRSLEINRKGKKMKGSVRAIQFSIALILSACAGLQKDHTSPAISDISTSDKVVVISDCLATSVTINAKVTDASNVKSVLLWVRVGSDQAFASLNMNLQNDLYAAKIKGADLQGHGYGAMEFYITAEDKEGNSSKSPVDNSIQFLPCVNN*
Ga0126311_1013850513300010045Serpentine SoilMLLSTLVSSACGRLQSDLSGPTISDISTSGKVLVISDCPATSVTITARVTDESKITHVLLWHRIGSDQSFVFTTMNMQNDLYVATVKGTDVQGHGYGAMEFYITAEDREGNTSESPHED
Ga0126311_1050933413300010045Serpentine SoilKVVVISDCLATSVTITAKVTDVSNVKSVLLWVRVGSDQPFASSNMNLQNDLYATKIKGADLQGHGYGAMEFYITAEDKEGNSSKSPVDNSIQFLPCVNN*
Ga0126311_1117900323300010045Serpentine SoilDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWVRVGSDQLFASSNMNLQNDLYTAKVKGADLQGHGYGAMEFYITAEDEKGNKSESPHDDSVQFLPCVNN*
Ga0126306_1004784223300010166Serpentine SoilMLLSTLVSSACGRLQSDLSGPTISDISTSGKVLVISDCPATSVTITARVTDESKITHVLLWHRIGSDQSFVFTTMNMQNDLYVATVKGADVQGHGYGAMEFYITAEDREGNTSESPHEDSIQFLPCVNN*
Ga0134127_1073596913300010399Terrestrial SoilMKSSIRIIALILISTLAASACGRLGRDSSSPTISDIATSDKVVVISDCLSTSVTITAKVTDASNVKSVLLWYHVGSDQPFVSSMMKLQNGIYRARVQGSDLQGHGYGAMEFYITAEDESGNSSKSPL
Ga0134127_1074977823300010399Terrestrial SoilMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTFTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNRSESPHDDSIQFLPCVNN*
Ga0134122_1090063023300010400Terrestrial SoilMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTSTKMDMQRELYTASVQGSDLQGHGYGAMEFYITAVDGEGNRSESPHDDSIQFLPCVNN*
Ga0134123_1270414613300010403Terrestrial SoilIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDGPFASSNMNLQNGLYAVKVKGADLQGHGYGTIDFYITAEDGKGNKSESPHDDSIQFLPCVNN*
Ga0105246_1007994923300011119Miscanthus RhizosphereMKPSLLQTILLGFMMTSCARIPGDHTGPAIDDISTSDQVVVISDCPSTSVTITAKVTDESNITSVLLWYRVGTDKSFTFTKMDKQNSVYAATVEGSQLQGHGYGAIEFYITAEDEVGNSSKSSIDNSIQFLPCVNN*
Ga0105246_1100550323300011119Miscanthus RhizosphereMKSFGGTATILFGIALILSACAGVRGDHTGPVISDISTSDKVVVISDCLSTSVTITARVSDASNIKRVLLWLRVGSDGPFASSNMNLQNGLYAAKVKGADLQGHGYGAMDFYITAEDGKGNKSE
Ga0137438_106830813300011431SoilMKSKKFITLTLIITLLLSACKGLSSDHAGPVISDISTTSKVLVISDCLDTSVTITAKVTDESKITGVLLWYRVGSDQPFASVSMDAQEELYTASVKGIDLQGHGYGAMKFYITAKDGEGNSSKSPLDNSIQFLPCVNS*
Ga0137438_119866723300011431SoilIIIFTISSCRGIQGDHEGPVISDITTSGKVLVISDCSSTSVVITAKVIDASRITSVILQYRVSSDQPFLSSAMDLKDSLYTASVKGADVQGNGYGAMEFYVVAKDEAGNSSKSRVDQSIQFLPCVNN*
Ga0137438_121436113300011431SoilDCLTTSVTITAKVTDVSNVKSVLLWYRVGSDQPFASSNMNLQNDIYAAQVKGADLQGHGYGAMEFYITAEDGKGNKSESPHDDSVQFLPCVNN*
Ga0137367_1016728523300012353Vadose Zone SoilMKGFVGTTTVLLGIALILSACAVIRGDHTGPVISDISTSDKVVVISDCPSTAVTITAKIMDESNITSVFLWVRVGTDGPFTSIRMDRQNDISTAKVAGSDLQGHGYGAIDFYITAEDEEGNKSESLHDDSIQFLPCVNN*
Ga0162651_10003738213300012938SoilPLISDISTSDKVVVISDCLATSVTITGTVTDESNIKSVLLWYRVGSDHPFASSTMNLKNGMYTAEVKGSDLQGHGYGAMEFYITAEDEAGNSSKSPLDNSIQFLPCVNN*
Ga0075323_108532813300014301Natural And Restored WetlandsPSTSVTITATVTDESNVTSVLLWFRVGTDGPFSSARMELQNDMYTASVQGSELQGHGYGAVEFYITAEDGEGNTTKSPVDNSVQFLPCVNN*
Ga0163163_1260761813300014325Switchgrass RhizosphereTISDIATSDKVVVISDCLSTSVTITAKVTDASNLKSVLLWYRVGSDQPFVSANMKIQNGIYTANVKGSELQGHGYGAMEFYIAAEDGEGNTSKSPINNSVQFLPCVNN*
Ga0132258_1106157813300015371Arabidopsis RhizosphereMKGFYRATLVCVTFILSACTGIQKDQAGPVISDISTSDKVVVISDCLSTSVTITAKVTDESNVKSVLLLYRVGSDGPFASSNMNLQNDIYAAKIKGADLQGHGYGAMEFYITAEDEAGNKSESPPDDSFQFLPCV
Ga0132258_1332833823300015371Arabidopsis RhizosphereMISDISTSGKVLVISDCLNTSVTITAKVRDDSPVANVILWYRVGEGQPFTSTNMALQEDLYTASVKGSELQGNGYGAMEFYVTAQDGGGNSSKSPVDQSIQFLPCVSH*
Ga0132256_10344366713300015372Arabidopsis RhizosphereNISDVATSDKVVVISDCLSTSVTITAKVTDASNVKSVLLLYRVGSEGPFASSNMNLQNDIYTAKIKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN*
Ga0132255_10046558643300015374Arabidopsis RhizosphereMKGFYRATLVCVTFILSACTGIQKDQAGPVISDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWYRVGSDQPFASANMNLENDIYAAKVKGADLQGHGYGAMEFYITAEDEEGNKSESPHDDSVQFLPCVNN*
Ga0207646_1026225923300025922Corn, Switchgrass And Miscanthus RhizosphereMKSFVGTVMLLLGIAWILSACAGSRGDHTGPAISDISTSDKVVVISDCLATSVTITAKVTDASNVISVLLWVRVGTDGPFASSNMNLQNGIYTAKVKGSELQGHGYGAMEFYITAEDGKGNKSESPHDDSIQFLPCVNN
Ga0207650_1186043113300025925Switchgrass RhizosphereMMTSCARIPGDHTGPAIDDISTSDQVVVISDCPSTSVTITAKVTDESNITSVLLWYRVGTDKSFTFTKMEKQNSVYAATLEGSQLQGHGYGAIEFYITAEDEVGNSSKSSIDNSIQFLP
Ga0207686_1142896913300025934Miscanthus RhizosphereMKCLVRSVALMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVMDASNITRVLLWYRVGPDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNRSESPHDDSIQFLPCVNS
Ga0207712_1070059413300025961Switchgrass RhizospherePAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGSDQPFTSTNMDMQSELYTASVQGSDLQGHGYGAMEFYITADDGEGNRSESPHDDSIQFLPCVNS
Ga0208284_101256513300026003Rice Paddy SoilMKSFVRTVTFLFGIALILSACDSKQSDQTGPVISDISTSDKVVVISDCLSTSVIITAKVTDASNVKSVLLWYRVGSDQPFASSEMNLQNDLYAAKVKGSDLQGHGYGAMEIYITAEDEKGNKSESPHDDS
Ga0207708_1001758243300026075Corn, Switchgrass And Miscanthus RhizosphereMKSSIRIIALILISTLAASACGRLGRDSSSPTISDIATSDKVVVISDCLSTSVTITAKVTDASNLKSVLLWYRVGSDQPFVSANMKIQNGIYTANVKGSELQGHGYGAMEFYITAEDERGNKSESPHDDSVQFLPCVNN
Ga0207674_1104123013300026116Corn RhizosphereGGPDTCAMHTCYTIVTTVVLLICSIFKMKPSLLQTILLGFMMTSCARIPGDHTGPAIDDISTSDQVVVISDCPSTSVTITAKVTDESNITSVLLWYRVGTDKTFTFTKMDKQNSVYAATVEGSQLQGHGYGAIEFYITAEDEVGNSSKSSIDNSIQFLPCVNN
Ga0207675_10056854623300026118Switchgrass RhizosphereMKCLVRSVALMVISTLVSSACTGIRGDHAGPAISDISTSDKVVVISDCPSTAVTITAKVTDASNITSVLLWYRVGPDQPFTFTNMDMQSELYTASVQGSDLQGHGYGAMEFYITAEDGEGNRSESPHDDSIQFLPCVNS
Ga0209878_102200923300027163Groundwater SandMKGCFKTSVRLLGAALIVSACARVRGDQTGPEIRDISTSDKIVVISDCPATAVTVTANVTDESTISSVLLWYRVGPDQPFAFTEMDVEGNLYMATIEGTSLQGHGYGPMEFYITAEDTEGNASRSRIDNSVQFLPCVNN
Ga0209683_1029000123300027840Wetland SedimentMKGFVGTTTILFGIALIVSACAGLQKDQAGPAISDISTSDKVVVISDCLATSVTITAKVTDASNVKSVLLWVRVGTDGPFASSNMNLQNGNYTAKVRGSDLQGHGYGAMEFYITAEDGKGNKSESPHDDSVQFLPCVNN
Ga0209814_1010061313300027873Populus RhizosphereMKSFVGTVMLLLGIGLLLPACAGSQGDLTGPVISDISTSDKVVVISDCLATSVTITARVSDASNVKSVLLWVRVGSDQPFASSNMNLQNDIYAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSVQFLPCVNN
(restricted) Ga0255310_1011014013300031197Sandy SoilVQNVLPNALNKKASFNVKANNQKSWNMKCLIRIVALIAISTFVLSACGRIRGDLSSPTISDISTSDKVVVISDCLTTSVTITAKVTDASNVKSVLLWYRVGSDQPFASSNMNLQNDIYAAKVKGADLQGHGYGAMEFYITAEDEAGNKSESPHDDSIQFLPCVNN
Ga0315297_1112083523300031873SedimentRRKSSALQKEHVKTCIRVSMLILIAALVLSACEGIRGEHTGPAISDISTSGKVVVISDCLATAVTITAKVTDASRITGVLLWYRVGADQPFTSTGMDAQGGLYTASVKGSDLQSDGYGTMEFYITAEDEEGNPGKSPVDKSIQFLPCVNN
Ga0315278_1101546313300031997SedimentSDISTSGKVVVISDCLATAVTITAKVTDASRITGVLLWYRVGADQPFTSTGMDAQGGLYTASVKGSDLQSDGYGTMEFYITAEDEEGNPGKSPVDKSIQFLPCVNN
Ga0315278_1175612813300031997SedimentQDRMEGVSWSRPSGLPSQVHYSAIFRMIRRKSSALQKEHVKTCIRVSMLVVIAALVLSACEGIRGDHTGPAISDISTSGKVVVISDCLATAVTITAKVTDASSITGVLLWYRVGADRPFTSTSMDAQGGLYTASVKGSDLQGDGYGTMEFYITAEDGEGNPGKSPLDKSIQFLPCVNN
Ga0315283_1035638123300032164SedimentMLILIAALVLSACEGIRGEHTGPAISDISTSGKVVVISDCLATAVTITAKVTDASRITGVLLWYRVGADQPFTSTGMDAQGGLYTASVKGSDLQSDGYGTMEFYITAEDEEGNPGKSPVDKSIQFLPCVNN
Ga0315268_1065634123300032173SedimentMKSRMFTNFIFIAALLLSACGKVSSDHAGPIISDISSTGKVLVISDCLATSVTITAKVTDASPITSVLLQYRVSSDQPFLSTDMELRGGLFTASVKGADLQGNGYGAMEFYVTAQDGAG
Ga0315270_1114461513300032275SedimentLIFIITLLLPACEGGSSDKAGPIISDISTSGKVVVISDCPATSVTITAKVTDASKITSVLLWVRVGSDQPFASIRMEAQGDLYTASVKGANLQGNGYGAMEFYITAEDGAGNSGKSPLDNSIQFLPCVSN
Ga0315287_1029987123300032397SedimentSGKVVVISDCLATAVTITAKVTDASRITGVLLWYRVGADQPFTSTGMDAQGGLYTASVKGSDLQSDGYGTMEFYITAEDEEGNPGKSPVDKSIQFLPCVNN
Ga0315287_1059056323300032397SedimentMLIFIAALVLSACEGIRGDHTGPAISDISTSGKVVVISDCLATAVTITAKVTDASSITGVLLWYRVGSDRPFTSTSMDAQGGLYTASVKGSDLQGDGYGTMEFYITAEDGEGNPGKSPLDESIQFLPCVNN
Ga0315273_1075979923300032516SedimentMEGVSWSRPSGLPSQVHYSAIFRMIRRKSSALQKEHVKTCILVSMLIFIAALVLSACEGIRGDYTGPAISDVSTSGKVLVISDCLATAVTITAKVTDASRITSVLLWYRVGSDRPFTSTSMDALEGLYTASVKGSDLQGDGYGTMEFYVTAEDGEGNAGKSPLDKSIQFLPCVNN

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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