Metagenome Family F091027

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091027
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	89 residues
Representative Sequence	SVPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVQ
Number of Associated Samples	104
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.63 %
% of genes near scaffold ends (potentially truncated)	90.74 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.889 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.815 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 44.83% Coil/Unstructured: 55.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.18.1.0: automated matches	d3jqwa_	3jqw	0.76102
b.18.1.36: Collagen-binding domain	d5ikua1	5iku	0.75111
b.18.1.0: automated matches	d5sv5a_	5sv5	0.7372
b.121.7.1: Satellite viruses	d1vtz0_	1vtz	0.72444
b.18.1.36: Collagen-binding domain	d1nqja_	1nqj	0.71416

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12697	Abhydrolase_6	4.63
PF02517	Rce1-like	3.70
PF13450	NAD_binding_8	3.70
PF01551	Peptidase_M23	1.85
PF02452	PemK_toxin	1.85
PF00732	GMC_oxred_N	1.85
PF00144	Beta-lactamase	1.85
PF01882	DUF58	0.93
PF00239	Resolvase	0.93
PF13458	Peripla_BP_6	0.93
PF01266	DAO	0.93
PF00285	Citrate_synt	0.93
PF13884	Peptidase_S74	0.93
PF11838	ERAP1_C	0.93
PF12680	SnoaL_2	0.93
PF11954	DUF3471	0.93
PF00300	His_Phos_1	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.70
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.70
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.85
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.85
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.85
COG0372	Citrate synthase	Energy production and conversion [C]	0.93
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.93
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.93
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.37 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	70.37 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.41 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	70.37 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.56 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.37 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.37 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.37 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.37 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Unclassified	root	N/A	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16630238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1160	Open in IMG/M
2170459002\|F0B48LX02F4B4R	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
2189573000\|GPBTN7E01DJWQX	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100462020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1085	Open in IMG/M
3300000559\|F14TC_100617334	All Organisms → cellular organisms → Bacteria	4148	Open in IMG/M
3300001431\|F14TB_100184343	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300002914\|JGI25617J43924_10342807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300003669\|LSCM4E_1056294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300004156\|Ga0062589_101540334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	656	Open in IMG/M
3300004643\|Ga0062591_102067751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300005166\|Ga0066674_10527320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	528	Open in IMG/M
3300005187\|Ga0066675_10804922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300005290\|Ga0065712_10000855	All Organisms → cellular organisms → Bacteria	7765	Open in IMG/M
3300005331\|Ga0070670_101332199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300005338\|Ga0068868_100302615	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300005440\|Ga0070705_100377735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1042	Open in IMG/M
3300005447\|Ga0066689_10523953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300005530\|Ga0070679_101375235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300005544\|Ga0070686_101133045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300005555\|Ga0066692_10005795	All Organisms → cellular organisms → Bacteria	5496	Open in IMG/M
3300005555\|Ga0066692_10059513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2153	Open in IMG/M
3300005563\|Ga0068855_101240183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	774	Open in IMG/M
3300005566\|Ga0066693_10350454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300005576\|Ga0066708_10714140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300005587\|Ga0066654_10213766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300005618\|Ga0068864_100013450	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6784	Open in IMG/M
3300005764\|Ga0066903_101771255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1179	Open in IMG/M
3300005841\|Ga0068863_100349059	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300006028\|Ga0070717_11832249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300006032\|Ga0066696_10257246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1129	Open in IMG/M
3300007265\|Ga0099794_10299090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	833	Open in IMG/M
3300009029\|Ga0066793_10057169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2218	Open in IMG/M
3300010042\|Ga0126314_10033804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3224	Open in IMG/M
3300010046\|Ga0126384_10709034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300010320\|Ga0134109_10146257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300010322\|Ga0134084_10332399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300010329\|Ga0134111_10059510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1404	Open in IMG/M
3300010337\|Ga0134062_10462939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300010358\|Ga0126370_10592407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300010366\|Ga0126379_12393025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300010375\|Ga0105239_10289855	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300010376\|Ga0126381_102088512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300010397\|Ga0134124_11608411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300011444\|Ga0137463_1096494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1112	Open in IMG/M
3300012202\|Ga0137363_10005413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7874	Open in IMG/M
3300012206\|Ga0137380_10092082	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300012210\|Ga0137378_10452391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1189	Open in IMG/M
3300012285\|Ga0137370_10213614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300012351\|Ga0137386_10235536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1316	Open in IMG/M
3300012353\|Ga0137367_10814090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300012356\|Ga0137371_10326500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1194	Open in IMG/M
3300012357\|Ga0137384_10354175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1216	Open in IMG/M
3300012362\|Ga0137361_10062638	All Organisms → cellular organisms → Bacteria	3117	Open in IMG/M
3300012493\|Ga0157355_1032703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300012914\|Ga0157297_10423296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300012927\|Ga0137416_10659602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	916	Open in IMG/M
3300012929\|Ga0137404_10836471	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012929\|Ga0137404_10960554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300012955\|Ga0164298_10108288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1486	Open in IMG/M
3300012971\|Ga0126369_12371269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300012977\|Ga0134087_10143209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1034	Open in IMG/M
3300012985\|Ga0164308_10733587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	855	Open in IMG/M
3300012987\|Ga0164307_11480197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300013296\|Ga0157374_10755289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	987	Open in IMG/M
3300013306\|Ga0163162_10691534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1142	Open in IMG/M
3300013306\|Ga0163162_12331585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300014166\|Ga0134079_10274243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	739	Open in IMG/M
3300014502\|Ga0182021_10441517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1547	Open in IMG/M
3300015242\|Ga0137412_10018455	All Organisms → cellular organisms → Bacteria	5670	Open in IMG/M
3300015262\|Ga0182007_10082874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300015372\|Ga0132256_103382113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300015374\|Ga0132255_102647826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300016341\|Ga0182035_11072868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300018054\|Ga0184621_10084959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1105	Open in IMG/M
3300018072\|Ga0184635_10116736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1060	Open in IMG/M
3300019866\|Ga0193756_1019715	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300019870\|Ga0193746_1001751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1780	Open in IMG/M
3300019877\|Ga0193722_1072013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	856	Open in IMG/M
3300019879\|Ga0193723_1158241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300019881\|Ga0193707_1002986	All Organisms → cellular organisms → Bacteria	6091	Open in IMG/M
3300019882\|Ga0193713_1148773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300019887\|Ga0193729_1004023	All Organisms → cellular organisms → Bacteria	7158	Open in IMG/M
3300020002\|Ga0193730_1003053	All Organisms → cellular organisms → Bacteria	4547	Open in IMG/M
3300021418\|Ga0193695_1003081	All Organisms → cellular organisms → Bacteria	3009	Open in IMG/M
3300025915\|Ga0207693_10920743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300025925\|Ga0207650_11070729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300025930\|Ga0207701_10977514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300025930\|Ga0207701_11200631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300026035\|Ga0207703_10607461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1035	Open in IMG/M
3300026075\|Ga0207708_10780684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300026095\|Ga0207676_10121854	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300026329\|Ga0209375_1007646	All Organisms → cellular organisms → Bacteria	6953	Open in IMG/M
3300026498\|Ga0257156_1009073	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300028380\|Ga0268265_11595326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300028796\|Ga0307287_10198420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300028799\|Ga0307284_10453658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300031446\|Ga0170820_11341005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300031469\|Ga0170819_10174081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1551	Open in IMG/M
3300031538\|Ga0310888_11108126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300031562\|Ga0310886_10332439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300031720\|Ga0307469_10734779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	899	Open in IMG/M
3300031858\|Ga0310892_10923823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300032013\|Ga0310906_10702131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300032075\|Ga0310890_11557509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300032174\|Ga0307470_10973293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	673	Open in IMG/M
3300032179\|Ga0310889_10137706	Not Available	1081	Open in IMG/M
3300033289\|Ga0310914_10429912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1195	Open in IMG/M
3300033488\|Ga0316621_10650929	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.26%
Host-Associated	Host-Associated	15.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.56%
Plants	Host-Associated → Plants	15.74%
Aquatic	Environmental → Aquatic	3.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.44%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003669	Coalbed water microbial communities from the Lithgow State Coal Mine, New South Wales, Australia (LSCM4 Early Sample 3)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02746330	2088090014	Soil	WTRFGSYMHQPLSSVPMLPNGAKEVVTIGPAGYAEWRAVASDVAPVQVTITTNGAWHLYDPAFTTVANGKGSDVACLPAGNGLGYLTLFGDPGQTITVAVQ
E1_06711630	2170459002	Grass Soil	MVRWRWSPIGPEGYAEWRAVLSDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVH
N55_06369370	2189573000	Grass Soil	MHQPLASLPVLPRGAKDVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGNGSDVAWLPAGNGLGYLTLFGDPGQTITVAVP
INPhiseqgaiiFebDRAFT_1004620201	3300000364	Soil	PQPLASVPALPHGATDVITIGPEGFAEWRAVATDVTPVQLSFTTAGAWHLYDSAFTSVAYGKGSDVASLPTGTGLGYVTLFGDPGQNITVAVQ*
F14TC_1006173341	3300000559	Soil	YMHQPLASVPVLPNGATDVVTIGPEGYAEWRAVASDGLPVEVSIATTGAWQLYDATFTSLTNGKGSDVASLPAGSGLGYLTLFGDPGQTITLAVR*
F14TB_1001843431	3300001431	Soil	VPVLPNGATDVVTIGPEGYAEWRAVASDGLPVEVSIATTGAWQLYDATFTSLTNGKGXAVTSLPAGSGLGYLTLFGDPGQTITLAVR*
JGI25617J43924_103428072	3300002914	Grasslands Soil	GAKEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGKGLGYLTLFGHPGQTITVAVH*
LSCM4E_10562942	3300003669	Coalbed Water	RDLDDLVIERHDGVEWVRFGSHLHRPLPSVPVLSRGTSDVVTIGAEGHAEWRVVETDESPVEIAITTSGAWQLYDETFTSVANGRGSAVAALPGGGRVGYVTLFGDAGHTVTVAAR*
Ga0062589_1015403341	3300004156	Soil	EVVTIGPEGYAEWRAVASDATPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0062591_1020677511	3300004643	Soil	RDLDDLDIVQRDGAEWTRFGSYMHQPLASVPVQPKGVKEVVTIGPEGYAEWRAVASDATPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0066674_105273202	3300005166	Soil	DGAEWVRFGSYMHQPLASLPVLPRGATDVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGSGLAYMTLFGEPGQTIMLTVQ*
Ga0066675_108049221	3300005187	Soil	VTIGPEGYAEWRAVGSDVTPVQVTITATGAWHLYDPAFTTVANGKGDGVACLPAGNGLGYLTLFGDPGQTVTVAAQ*
Ga0065712_100008551	3300005290	Miscanthus Rhizosphere	IGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0070670_1013321991	3300005331	Switchgrass Rhizosphere	RGATEVVTIGPEGYAEWRAVASDVTPIQVTITTTGAWHLYDPAFTTVANGKGNTVTSLPAGKGLGYLTLFGDSGQTITVAVK*
Ga0068868_1003026151	3300005338	Miscanthus Rhizosphere	GSYMHQPLASVPVLPKATNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0070705_1003777351	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGKGLGYLTLFGNPGQTITVAVK*
Ga0066689_105239531	3300005447	Soil	RGATDVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0070679_1013752351	3300005530	Corn Rhizosphere	LASVPVLPRGATKAVNIGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0070686_1011330452	3300005544	Switchgrass Rhizosphere	WVRFGSYMHRPLASVPVLRSGATDVVTIGPQGHAEWRAVVSDGAPVEVAVTTTGAWQLYDETFASVAHGQGSALATLPAGGGLGYITLFGDPGQAVTVAAQ*
Ga0066692_100057951	3300005555	Soil	VVTIGPKGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVH*
Ga0066692_100595131	3300005555	Soil	VVTIGPKGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVAWLPAGNGLGYLTLFGHPGQTITVAVQ*
Ga0068855_1012401831	3300005563	Corn Rhizosphere	GSYMHQPLASVPVLPKGTNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0066693_103504541	3300005566	Soil	ARTKACEHQPVASVAMVPTGATAVVTISPEGYAEWRAVASDATPVQITISTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0066708_107141402	3300005576	Soil	GSYMHQPLVSVPVLPTGATEVVTIGSEGYAEWRGVVSDVTPVQVTITTIGAWHLYDPAFTTVANGKGDGVACLPAGNGLGYLTLFGDPGQTVTVAAQ*
Ga0066654_102137661	3300005587	Soil	RGATDVVTIGPEGYAEWRAVASDVTPVQVTITTTVAWHLYDPAFTSLANGKGSAVTSLPAGSGLAYMTLFGEPGQTIMLTVQ*
Ga0068864_1000134501	3300005618	Switchgrass Rhizosphere	PKGTNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0066903_1017712551	3300005764	Tropical Forest Soil	IVQRDGAEWTRFGSYMHQPLASVPVLSNGATEVVTIGLEGYAEWRAVASDVTPVQVTITTTGAWHLYDRTFKTVANGKGKAVTSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0068863_1003490591	3300005841	Switchgrass Rhizosphere	VLPKGTNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0070717_118322491	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YMYQPLSSVPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0066696_102572462	3300006032	Soil	VPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0099794_102990902	3300007265	Vadose Zone Soil	LPNGATEVVTIGPEGYAEWRAVLSDVTPVQVTITTTGAWRLYAPAFTTVANGKGSDVACLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0066793_100571694	3300009029	Prmafrost Soil	EVITIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGSGLAYITLFGDPGQTITVAVQ*
Ga0126314_100338042	3300010042	Serpentine Soil	GGTEVVTIGSEGYAEWRAVLSDVTPVQVTITTIGAWHLYDPAFTTAANGNGTAVTSLPAGNGLAYLTLFGDPGQTVTVAVQ*
Ga0126384_107090341	3300010046	Tropical Forest Soil	TEWTRFGSYMHQPLASVPALPRGATKVVNIGPDGYAEWRAVASEATPVQITITTTGAWHLYDPEFKTVANGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVK*
Ga0134109_101462572	3300010320	Grasslands Soil	PLLPNGATEVVTIGPAGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0134084_103323992	3300010322	Grasslands Soil	RFGSYMHQPLASVPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0134111_100595101	3300010329	Grasslands Soil	LASVPVLPRGATEMVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTAVANGKGSDVAWLPAGKGLAYMTLFGDPGQTITVAVQ*
Ga0134062_104629391	3300010337	Grasslands Soil	WVRFGSYMHQPLASLPVLPRGATDVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGSGLAYMTLFGEPGQTIMLTVQ*
Ga0126370_105924071	3300010358	Tropical Forest Soil	GSYMHRPLASVPVLPRGATKVVNVGAEGYAEWCAVASDATPVQITITTTGAWHLYDSEFKTVANGKGNAATSLPAGKGLGYLTLFGDPKQTITVAVQ*
Ga0126379_123930251	3300010366	Tropical Forest Soil	VTIGLEGYAEWRAVASDVTPVQVTITTTGAWHLYDRTFKTVANGKGKAVTSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0105239_102898553	3300010375	Corn Rhizosphere	PLASVPVLPKGTNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTMANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0126381_1020885122	3300010376	Tropical Forest Soil	WTRFGSYMHQPLESVLVLARSATKVVNIGPEGYAEWRAIASDVTPVHVTITTTGAWHLYDPEFKTVANGKGNAATSMPAGKGLGYLTLFGDPKQTITVAVQ*
Ga0134124_116084111	3300010397	Terrestrial Soil	RGATDVITIGPEGYAEWRAVASDMTPLQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0137463_10964943	3300011444	Soil	NGAKEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGSGLGYLTLFGDPGQTITVAVH*
Ga0137363_100054131	3300012202	Vadose Zone Soil	TEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWRLYDPAFTTVANGKGNAVTSLPAGSGLGYLTLFGDPGQTITVAVQ*
Ga0137380_100920825	3300012206	Vadose Zone Soil	ATDAVTIGPEGYAEWRAVATDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGHPGQTITVAVQ*
Ga0137378_104523913	3300012210	Vadose Zone Soil	VVTIGPEGYAEWRAVASDVTPVQVTITTTGAWQLYDPAFTTVANGKGSDVACLPAGNGLAYLTLFGDPGQTITVAVQ*
Ga0137370_102136142	3300012285	Vadose Zone Soil	LASVPVLPKGAKEVVTIGPEGYAEWRAVASDVTPIQATITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0137386_102355361	3300012351	Vadose Zone Soil	HQPLASVPMLPNGATEVITIGPEGYAEWRAVATDVTPVQITITTTGAWQLYDPAFTTVANGKGSDVACLPAGNGLAYLTLFGDPGQTITVAVQ*
Ga0137367_108140902	3300012353	Vadose Zone Soil	VLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWQLYDPAFTTVANGKGSDVACLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0137371_103265003	3300012356	Vadose Zone Soil	LPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWQLYDPAFTTVANGKGSDVACLPAGNGLAYLTLFGDPGQTITVAVQ*
Ga0137384_103541751	3300012357	Vadose Zone Soil	RFGSYMHQPLASVPVLPRGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWQLYDPAFTTVANGKGSDVACLPAGNGLAYLTLFGDPGQTITVAVQ*
Ga0137361_100626385	3300012362	Vadose Zone Soil	TKVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVAWLPAGKGLGYLTLFGHPKQTITVAVH*
Ga0157355_10327031	3300012493	Unplanted Soil	QPLASVPVQPKGVKEVVTIGPEGYAEWRAVASDATPVQVTITTTGAWHLYDPAFTTVANGNGSAVTSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0157297_104232961	3300012914	Soil	QPKGVKEVVTIGPEGYAEWRAVASDATPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0137416_106596022	3300012927	Vadose Zone Soil	VLPRGATEVVTIGPESYAEWRAVASDVTPIQVTITTTGAWHLYDPAFTTVANGKGSDVAWLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0137404_108364711	3300012929	Vadose Zone Soil	EVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWQLYDPAFASLANGKGSAVTSLPAGNGLGYLTLFGHPGQTITVAVH*
Ga0137404_109605541	3300012929	Vadose Zone Soil	IGPEGYAEWRAVASDVTPLQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGKGLGYLTLSGDPGQTITVVVQ*
Ga0164298_101082881	3300012955	Soil	AEWTRFGSYMHRPLASVPALPNGATEVVTIGPEGYAEWRAVASGATPVQITITTTGAWHLYDPEFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTITVAAK*
Ga0126369_123712691	3300012971	Tropical Forest Soil	KGANELVTIGPEGYAEWRAVVSNVTPVQVTITTTGAWHLYDPAFRSVANGKGNAVTSLPAGNGLSYLTLFGNPGQTITVAVK*
Ga0134087_101432092	3300012977	Grasslands Soil	LPVLPRGATDVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSLANGKGSAVTSLPAGSGLAYMTLFGEPGQTIMLTVQ*
Ga0164308_107335872	3300012985	Soil	AKEVVTIGPAGYAEWRAGASDVAPVQVTITTSGAWPLYDPAFTTVANGKGSDVACLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0164307_114801971	3300012987	Soil	EWTRFGSYMHQPLASVPVLLNGATEVITIGPKGYAEWRAVASGATPVQVTITTTGAWHLYDPEFKTVANGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVK*
Ga0157374_107552892	3300013296	Miscanthus Rhizosphere	DDLEIVERNGAEWTRWGSYMHQPLSSVPMLPNGAKEVVTIGPAGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ*
Ga0163162_106915341	3300013306	Switchgrass Rhizosphere	VPVLPRGATKAVNIGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGNPGQTITVAVK*
Ga0163162_123315851	3300013306	Switchgrass Rhizosphere	GSYMHQPLASVPVLPRGATEVVTIGPVGYAEWRAVASDVTPIQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ*
Ga0134079_102742431	3300014166	Grasslands Soil	LASVPVLPRGATKAVNIGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGDPGQTITVAVQ*
Ga0182021_104415171	3300014502	Fen	DLNIVLRNGVEWIRFGSYMHQPLSSVVVMPRNTTSKVTIGPEGYAEWRAIATDVNPVRINISTIGAWRIYDPSFTNLANGKGNGVASLPAGSGLGYLTLFGDPGQTITVTVQ*
Ga0137412_100184552	3300015242	Vadose Zone Soil	VLPRGATKAVNIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTVTVAAQ*
Ga0182007_100828742	3300015262	Rhizosphere	VTVLPRGATDVITIGGEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTSVANGKGNAVTSLPAANGRGYLCPYSRGQQNNYFR*
Ga0132256_1033821131	3300015372	Arabidopsis Rhizosphere	LPNGAKEVVTIGPEGYAEWRAVASDATPVQITITTTGGWHLYDPEFKTVANGKGNAATSLPAGNGLDYLTLFGNPGQTITVAVK*
Ga0132255_1026478261	3300015374	Arabidopsis Rhizosphere	KAVNIGPDGYAEWCAVASDATPVQITITTTGAWHLYDLEFKTVASGKGNAATSLPAGKGLGYLTLFGDAGQTITVAVK*
Ga0182035_110728681	3300016341	Soil	VTIGPEGYAEWRAVASDVAPVQVTITTTGAWHLYDAAFTTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTITVAVQ
Ga0184621_100849593	3300018054	Groundwater Sediment	GSYMHQPLASVPVLPRGATDAVTIGPEGYAEWRAVASNVTPVQVTITTTGAWHLYDPAFTTVANGKGRAVTSLPAGSGLGYLTLFGDPGQTITVAVQ
Ga0184635_101167362	3300018072	Groundwater Sediment	SVPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVQ
Ga0193756_10197151	3300019866	Soil	RFGSYMHQPLASVPVLPKGANEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVH
Ga0193746_10017511	3300019870	Soil	SSVPMLPNGAKEVVTIGPAGYAEWRAVASDVAPVQVTITTTGAWHLYDPEFKTVANGKGNAATSLPAGNGLGYLTVFGDPKQTITVAVQ
Ga0193722_10720132	3300019877	Soil	MHQPLAAVPVLPNGATEVITIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGKGLGYLTLFGDPKQTITVAVQ
Ga0193723_11582411	3300019879	Soil	ITIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGKGLGYLTLFGDPKQTITVAVQ
Ga0193707_10029861	3300019881	Soil	YMHQPLASVPVLPNGAKEVVTIGPKGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGSGLGYLTLFGEPGQTITVAVQ
Ga0193713_11487732	3300019882	Soil	IGREGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGSGLGYLTLFGEPGQTITVAVQ
Ga0193729_100402310	3300019887	Soil	GAKEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVH
Ga0193730_10030536	3300020002	Soil	EVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGNGLGYLTLFGDPGQTITVAVH
Ga0193695_10030813	3300021418	Soil	VVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGNDVTSLPAGSGLGYLTLFGDPGQTITVAVQ
Ga0207693_109207431	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ATEVVTIGPEGYAEWRAVASDVSPVQVTITTTGAWHLYDPPFTTVPNGKGSAVTSLPAGNGLGYLTLFADPGQTITVAVQ
Ga0207650_110707291	3300025925	Switchgrass Rhizosphere	RGATEVVTIGPEGYAEWRAVASDVTPIQVTITTTGAWHLYDPAFTTVANGKGNTVTSLPAGKGLGYLTLFGDPGQTITVAVK
Ga0207701_109775141	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	QPLASVPVVPRGATDVITIGPEGYAEWRAVASDMTPLQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ
Ga0207701_112006311	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RFGSYMHQPLASMPVQPKGVKEVVTIGPEGYAEWRAVASDATPVQVTITTTGAWHLYDPAFTTVANGKGNAVTSLPAGNGLGYLTLFGNPGQTITVAVK
Ga0207703_106074612	3300026035	Switchgrass Rhizosphere	VPVLPRGATKAVNIGPDGYAEWCAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGKGLGYLTLFGNPGQTITVAVK
Ga0207708_107806842	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PVLPRGATKAVNIGPEGYAEWRAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGNGLGYLTLFGNPGQTITVAVK
Ga0207676_101218542	3300026095	Switchgrass Rhizosphere	PKGTNEVVTIGPEGYAEWRAVASNATSEQITITTTGAWHLYDPAFKTVANGKGNAVTSLPAGNGLGYLTLFGDPGQTVTVAVQ
Ga0209375_10076461	3300026329	Soil	VVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVAWLPAGKGLAYMTLFGDPGQTITVAVQ
Ga0257156_10090733	3300026498	Soil	QPLASVPVLPRGATKVVTIGPEGYAEWRAVASDVTPIQVTITTTGAWHLYEPAFTTVANGKGSAVTSLPAGKGLGYLTLFGHPGQTITVAVH
Ga0268265_115953261	3300028380	Switchgrass Rhizosphere	AIEQRDGAEWVRFGSYMHRPLASVPVLRSGATDVVTIGPQGHAEWRAVVSDGAPVEVAVTTTGAWQLYDETFASVAHGQGSALATLPAGGGLGYITLFGDPGQAVTVAAQ
Ga0307287_101984201	3300028796	Soil	QPLASVLVLPNGATEVVTIGPEGYAQWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGRAVTSLPAGSGLGYLTLFGDPGQTITVAVQ
Ga0307284_104536582	3300028799	Soil	AGRPRAGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGNDVTSLPAGSGLGYLTLFGDPGQTITVAVQ
Ga0170820_113410052	3300031446	Forest Soil	ASVPVLPNGAKEVVTIGPEGYAEWRAVLSDVTPVRVTITTTGAWHLYDPAFTSLANGKGSDVAWLPAGSGLGYLTLFGDPGQSITVAVQ
Ga0170819_101740811	3300031469	Forest Soil	VPVLPNGATEVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGKGLGYLTLFGDPGQTITVAVQ
Ga0310888_111081261	3300031538	Soil	YMHQPLASVPVLPRGATKAVNIGPDGYAEWCAVASDATPVQITITTTGAWHLYDPEFKTVASGKGNAATSLPAGKGLGYLTLFGDAGQTITLAVK
Ga0310886_103324391	3300031562	Soil	PVLPRGATDVITIGPEGYAEWRAVASDMTPLQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ
Ga0307469_107347791	3300031720	Hardwood Forest Soil	RFGSYMHQPLASVPVLPRGATEVVTIGPESYAEWRAVASDVTPVQVTITTTGAWHLYDPAFTTVANGKGRAVTSLPAGSGLGYLTLFGDPGQTITVAVQ
Ga0310892_109238232	3300031858	Soil	ASVPVVPRGATDVITIGPEGYAEWRAVASDMTPLQVTITTTGAWHLYDPAFTTVANGKGSAVTSLPAGKGLGYLTLFGDPGQTITVAVQ
Ga0310906_107021311	3300032013	Soil	RFGSYMHQPLSSVPVLTRGATDVITIGPEGYAEWRAVASDVIPVQVTITTTGAWHLYDPAFTTVANGKGSDVACLPAGKGLGYLTLFGDPGQTITVAVQ
Ga0310890_115575091	3300032075	Soil	PVVPRGATDVITIGPEGYAEWRAVASDMTPLQVTITTTGAWHLYDPAFTSLANGKGSAMPSLPAGSGLAYMTLFGEPGQTIRLAVQ
Ga0307470_109732931	3300032174	Hardwood Forest Soil	RFGSYMHRPLASVPVLPRGATKAVNIGPDGYAEWCAVASDATPVQITITTTGAWHLYDPEFKTVANGKGDAVTSLPAGNGLAYLTLFGNPGQTIKVALK
Ga0310889_101377061	3300032179	Soil	TIGPEGYAEWRAVASDVTPVRVTITTTGAWHLYDPAFTSLANRKGSAVTTLPPGSGLAYMTLFGEPGQTIRLTVH
Ga0310914_104299121	3300033289	Soil	VPVPPRGATKVVTIGPEGYAEWRAVASDVTPVQVTITTTGAWHLYDAAFTTVANGKGNAVTSLPAGNGLGYLTLFGDAGQTITVAVK
Ga0316621_106509292	3300033488	Soil	PEGYAEWRAVMSQQASLPISITTTGAWQLYDPTFTSVANGTGPATVSVPAGSGLAYLTLFGEPGQSVLLAVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences