Metagenome Family F090953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090953
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	86 residues
Representative Sequence	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREG
Number of Associated Samples	67
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.26 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.111 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.815 % of family members)
Environment Ontology (ENVO)	Unclassified (61.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.53% β-sheet: 25.44% Coil/Unstructured: 64.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07883	Cupin_2	45.37
PF01817	CM_2	4.63
PF03060	NMO	2.78
PF07729	FCD	1.85
PF05368	NmrA	1.85
PF03466	LysR_substrate	1.85
PF04227	Indigoidine_A	0.93
PF01522	Polysacc_deac_1	0.93
PF00165	HTH_AraC	0.93
PF01494	FAD_binding_3	0.93
PF05199	GMC_oxred_C	0.93
PF03631	Virul_fac_BrkB	0.93
PF16864	Dimerisation2	0.93
PF12833	HTH_18	0.93
PF08031	BBE	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	4.63
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	2.78
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	2.78
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.85
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.85
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.85
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.93
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.93
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.93
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.93
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.11 %
Unclassified	root	N/A	13.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.11 %
Unclassified	root	N/A	13.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.11 %
Unclassified	root	N/A	13.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.41 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10159534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	917	Open in IMG/M
3300004268\|Ga0066398_10044672	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300004633\|Ga0066395_10137456	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005332\|Ga0066388_107702773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	540	Open in IMG/M
3300005764\|Ga0066903_100269628	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300005764\|Ga0066903_101356496	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300005764\|Ga0066903_102360118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1028	Open in IMG/M
3300009792\|Ga0126374_10612791	Not Available	805	Open in IMG/M
3300009792\|Ga0126374_10615180	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300010043\|Ga0126380_10101440	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300010046\|Ga0126384_10597737	Not Available	965	Open in IMG/M
3300010048\|Ga0126373_10010141	All Organisms → cellular organisms → Bacteria	7584	Open in IMG/M
3300010048\|Ga0126373_11906656	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010359\|Ga0126376_11450895	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300010360\|Ga0126372_10903962	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300010360\|Ga0126372_11010522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	844	Open in IMG/M
3300010360\|Ga0126372_13159045	Not Available	512	Open in IMG/M
3300010361\|Ga0126378_10202106	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300010361\|Ga0126378_10465095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1379	Open in IMG/M
3300010361\|Ga0126378_12858264	Not Available	551	Open in IMG/M
3300010366\|Ga0126379_11688245	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300010366\|Ga0126379_11810449	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300010376\|Ga0126381_100403750	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300010376\|Ga0126381_100973302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300010376\|Ga0126381_102350758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	765	Open in IMG/M
3300010376\|Ga0126381_102903321	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010376\|Ga0126381_103294169	Not Available	637	Open in IMG/M
3300012948\|Ga0126375_10506729	Not Available	901	Open in IMG/M
3300012971\|Ga0126369_10022126	All Organisms → cellular organisms → Bacteria	5112	Open in IMG/M
3300012971\|Ga0126369_10720184	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300016270\|Ga0182036_10241620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1347	Open in IMG/M
3300016270\|Ga0182036_10246187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1336	Open in IMG/M
3300016270\|Ga0182036_11355730	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300016294\|Ga0182041_11079705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300016341\|Ga0182035_10985283	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300016341\|Ga0182035_11155514	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300016357\|Ga0182032_11049600	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300016357\|Ga0182032_11125474	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300016371\|Ga0182034_10634007	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300016387\|Ga0182040_10747812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300016387\|Ga0182040_10797835	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300016404\|Ga0182037_10106819	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300016404\|Ga0182037_10381985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1155	Open in IMG/M
3300016404\|Ga0182037_10899283	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300016445\|Ga0182038_10570460	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300016445\|Ga0182038_12147997	Not Available	506	Open in IMG/M
3300021088\|Ga0210404_10765875	Not Available	551	Open in IMG/M
3300021559\|Ga0210409_10473724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1114	Open in IMG/M
3300021560\|Ga0126371_10359913	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300021560\|Ga0126371_11162457	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300027654\|Ga0209799_1062447	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300027654\|Ga0209799_1125635	Not Available	584	Open in IMG/M
3300027874\|Ga0209465_10008501	All Organisms → cellular organisms → Bacteria	4524	Open in IMG/M
3300027874\|Ga0209465_10411799	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031544\|Ga0318534_10162210	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300031573\|Ga0310915_10656841	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031668\|Ga0318542_10113053	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300031681\|Ga0318572_10736805	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031736\|Ga0318501_10308138	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031751\|Ga0318494_10074218	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300031754\|Ga0307475_10162218	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300031754\|Ga0307475_10515277	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300031754\|Ga0307475_10686593	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031770\|Ga0318521_10887738	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031771\|Ga0318546_10007871	All Organisms → cellular organisms → Bacteria	5478	Open in IMG/M
3300031771\|Ga0318546_10119355	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300031771\|Ga0318546_10306717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1100	Open in IMG/M
3300031781\|Ga0318547_10458659	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031782\|Ga0318552_10003733	All Organisms → cellular organisms → Bacteria	5755	Open in IMG/M
3300031799\|Ga0318565_10064401	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300031805\|Ga0318497_10065541	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300031833\|Ga0310917_10067918	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300031833\|Ga0310917_11093720	Not Available	532	Open in IMG/M
3300031859\|Ga0318527_10445032	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031910\|Ga0306923_11960983	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031910\|Ga0306923_12185504	Not Available	555	Open in IMG/M
3300031912\|Ga0306921_11915752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300031912\|Ga0306921_12273973	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031941\|Ga0310912_10022939	All Organisms → cellular organisms → Bacteria → Proteobacteria	4162	Open in IMG/M
3300031941\|Ga0310912_10045262	All Organisms → cellular organisms → Bacteria	3070	Open in IMG/M
3300031941\|Ga0310912_10933242	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031942\|Ga0310916_11605542	Not Available	528	Open in IMG/M
3300031945\|Ga0310913_10040494	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300031945\|Ga0310913_10509074	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031946\|Ga0310910_10683942	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031947\|Ga0310909_10343636	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300031947\|Ga0310909_10355313	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300031959\|Ga0318530_10144181	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300031959\|Ga0318530_10428472	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031962\|Ga0307479_11254625	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300032010\|Ga0318569_10438735	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300032025\|Ga0318507_10528491	Not Available	513	Open in IMG/M
3300032035\|Ga0310911_10471916	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300032041\|Ga0318549_10530359	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300032042\|Ga0318545_10052419	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300032043\|Ga0318556_10313566	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300032052\|Ga0318506_10030840	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300032059\|Ga0318533_11117841	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032076\|Ga0306924_12089271	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300032094\|Ga0318540_10184251	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300032261\|Ga0306920_100074653	All Organisms → cellular organisms → Bacteria	4974	Open in IMG/M
3300032261\|Ga0306920_100217632	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300032261\|Ga0306920_100941040	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300032261\|Ga0306920_103686516	Not Available	562	Open in IMG/M
3300033289\|Ga0310914_10011571	All Organisms → cellular organisms → Bacteria → Proteobacteria	6566	Open in IMG/M
3300033289\|Ga0310914_11194065	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300033290\|Ga0318519_10441644	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101595341	3300001867	Forest Soil	MRVAVDVFALAGEPSVQVQYDHVLGMMLRPGFVEVGLQRSAMRRVNFQAGEMGFFPRYMERWVGSGHQERLLLLISDAALLAAREGISHTGDL
Ga0066398_100446722	3300004268	Tropical Forest Soil	MKVAVDVLAPVGEPRMQVQDGNVLGMMLRPGFINVGSQRSAMRRVTFQEGEMGFFPRHMERWVGTGHQERLLLRISDAALRAAHEGISGAVELDHKCKMGDA
Ga0066395_101374561	3300004633	Tropical Forest Soil	MRVAVDVLGSVKDPYMQVHDEHVLAMMMRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTERWVGAGDQERLLFRISDAALVAAS
Ga0066388_1077027731	3300005332	Tropical Forest Soil	MKVVVDVHGSVTEAYVRVQDEHVLAMMLRHGAIEVGARRPTMQRVTFQAGEIGFLPRHSERWVGSGNQERLL
Ga0066903_1002696281	3300005764	Tropical Forest Soil	MRVAEDVLGSVREPYVQVLDEHVHAMMLRHGAIEVGPRLSAMRRVTFRAGEMGFFPRQTERWVGSGDQERLVLHISDAALVAARNGTSGTVELGHRCKMVD
Ga0066903_1013564961	3300005764	Tropical Forest Soil	MCMHLPERPRVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQTGEMGFFPRRMERWVGTGHQQRLLLLISDAALRAAREGISGA
Ga0066903_1023601181	3300005764	Tropical Forest Soil	MRVAVDVFALAGEPSVQVQDDHVLGMMLRPGFVEVGLQRSAMRRVTFQTGEMGFFPRYMERWVGSGHQERLLLLISDAALRAAREGISH
Ga0126374_106127911	3300009792	Tropical Forest Soil	MRVAVDVFALAGEPSVQVQFDHVLGMMLRPGFVEVGLQRSAMRRVNFQAGEMGFFPRYMERWVGSGHQERLLLLISDAVLLAAREGISHTGDLDHWCKMGDVRLAALVKA
Ga0126374_106151801	3300009792	Tropical Forest Soil	MGVVVDVHGSIREPYLQVRDEHVLAMMLRHGAIEVGARPSAMRRVTFQAGEMGFFPRQTERWVG
Ga0126380_101014401	3300010043	Tropical Forest Soil	MRVAVDVFALAGEPSVQVQDDHVLGMMLRPGFVEVGLQRSAMRRVTFQTGEMGFFPRYMERWVGSGHQERLLLLISDAALRAAREGISHAGDLDHWCKMGDVRLAALVKAV
Ga0126384_105977371	3300010046	Tropical Forest Soil	MRVAVDVHAPAGEPRVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQTGEMGFFPRRMERWVGTGHQQRLLLLISDAALRAAREGISGAA
Ga0126373_100101411	3300010048	Tropical Forest Soil	MRVAVDVIAPVGEPYVQVQDEHVLGIMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGRQERLLLRISDAALRAAREGIKGAVELGHWCKMRDVRVAALAKA
Ga0126373_119066561	3300010048	Tropical Forest Soil	MKVAVDVLAPVEEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRTERWVGT
Ga0126376_114508951	3300010359	Tropical Forest Soil	MRVAVDVLAPVGDPWVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVKFQTGEMGFFPRHMERWVGAGYQERLLLSISDGALTAAREGISGTVELGHWCKMAD
Ga0126372_109039622	3300010360	Tropical Forest Soil	MRVQDEHVLAMLLRHGAVEVGARRSTMQRVTFQAGEMGFHPRHSERWVGTGNQERLLLSISDTALRAAREGIRGTVELGHWCKKVDTRLAALVKA
Ga0126372_110105222	3300010360	Tropical Forest Soil	MRVTVDVLGSVREPYLQVQEEHVLAMMLRHGAIEVGARRSAVRRVTFQAGDMGFFPRQTERWVGTGNQERLVLHISDA
Ga0126372_131590451	3300010360	Tropical Forest Soil	MRVAVDVLARVGEPLVQVQDEHVLGMMLRPGFIEVGLQRSAMQRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREGISGAVELGHWCKMVDVRLAAL
Ga0126378_102021061	3300010361	Tropical Forest Soil	MRVAVDVLAPAGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGISGAVELGHWCK
Ga0126378_104650953	3300010361	Tropical Forest Soil	MRVTVDVFALAGEPSVQVQYDHVLGMMLRPGFVEVGLQRSAMRRVNFQAGEMGFFPRYMERWVGSGHQERLLLLISDAALLAAREGISHTGDLDHWCKMGDVRLAALVKAVNA
Ga0126378_128582641	3300010361	Tropical Forest Soil	MKVVVDVHGSVSEPYMQVRDEHVLAMMLRHGTLEVGARRSTMQRETFQAGAVGFLARHSERWVGSGNQQRLLLSISDAAISAAREGIRGTVELGHRCKMVD
Ga0126379_116882452	3300010366	Tropical Forest Soil	MKVVVDVHGSVSEPYMQVRDEHVLAMMLRHGTLEVGARRSTMQRETFQAGAVGFLARHSERWVGNGNQERLLLSISDAALS
Ga0126379_118104492	3300010366	Tropical Forest Soil	MKVAVDVHAPVGEPRVQVQDDHVLGMMLRPGFIEVGPQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALSAAREGIGGAVELGHWCNMGDARLAALVQAVNAE
Ga0126381_1004037504	3300010376	Tropical Forest Soil	VKVVVDVHGAVTEPYMQVEDEHFLAMMLRHGTIEVGARRSTVQRVTFQSGAIGFLPRHSERWVGSGNQERLLLSISDAALSAAREG
Ga0126381_1009733021	3300010376	Tropical Forest Soil	MKVVVDVHGSVSEPYMQVRDEHVLAMMLRHGTLEVGARRSTMQRETFQAGAVGFLARHSERWVGNGNQERLLLSISDAAL
Ga0126381_1023507582	3300010376	Tropical Forest Soil	MRVAVDVFALAGEPSVQVQFDHVLGMMLRPGFVEVGLQRSAMRRVNFQAGEMGFFPRYMERWVGSGHQERLLLLISDAA
Ga0126381_1029033211	3300010376	Tropical Forest Soil	MKVAVDVLAPIGEPRVQVQDEHVLGMMLRPGFIDVGSQRSAMRRVTFQEGEMGFFPRHMERWVGTGHQERLLLRISNAALSAAREGISGAVELGHWCKMRD
Ga0126381_1032941691	3300010376	Tropical Forest Soil	MRVAVDVFALAGEPSVQVQDDHVLGMILRPGFVEVGLQRSAMRRVTFQTGEMGFFPRYMERWVGSGHQERLLLLISDAALRAAREGISHAGDLDHWCKMGDVRLAALVKA
Ga0126375_105067292	3300012948	Tropical Forest Soil	MKVVVDVHGSVKEPYLRVHEEHVLAMMLRHGVIEVGARPSAMRRVTFQAGEIGFFPRQTERWVGAGDQERLLLRISDAALRAKRPVLHSDADFTE*
Ga0126369_100221266	3300012971	Tropical Forest Soil	MRVQDEHVLAMMLRHGAVEVGARRSTMQRITFQAGEMGFHPRHSERWVGTGNQERLLLSISDTALRAAREGIRGTVELGHWCKMVDTRLAALVKAVN
Ga0126369_107201843	3300012971	Tropical Forest Soil	MRVAVDVIAPVGEPYVQVQDEHVLGIMLRPGFIEVGLQRSSMRRVTFQAEEMGFFPRRMERWVGTGRQERLLLRISDAALRAAREGIKGAVELGH
Ga0182036_102416203	3300016270	Soil	MRVAVDVLAPVGEPHVQVQDEHVLGMMLRAGFIEVGLQRSAMRRVTFQAGDMGFFPRRMERWVGTG
Ga0182036_102461873	3300016270	Soil	MRVAVEVLGSVREPYPEVRQEHVLAMMLRHGAIEVGARRSAMRRVTFQAGEMGFFPRQTERWVGTGNQERLLL
Ga0182036_113557301	3300016270	Soil	MKVAVDVLAPVEEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRTERWVGTGHQERLLLRISDAAL
Ga0182041_110797052	3300016294	Soil	VRVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGEIGFLPRYSELWVGTGNQERLLLGISDTALRTAREGLRRNLGRVASKQQHRTVHWFR
Ga0182035_109852831	3300016341	Soil	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREG
Ga0182035_111555142	3300016341	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPSFIEVGLQRSAMRRVTFQEGEMGFFPRRMERWVGTGHQERLLLSISDAVLRAARERISGAVENG
Ga0182032_110496002	3300016357	Soil	MRVAVDVLGPVGEPCVQVHEDHVLGMMLRPGFIEVGLQRSAMRRVTFQTGDIGFFPRRMERWVGSGRQ
Ga0182032_111254742	3300016357	Soil	VKVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGAIGFLPRHSERWVGSG
Ga0182034_106340072	3300016371	Soil	VKVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGAIGFLPRHSERWVGSGNQERLLLGIS
Ga0182040_107478122	3300016387	Soil	VAVDVYVGEPCLQVQDDHFLGMMLRTGFIEVGSQRSAMRRVTFQAGEVGFAPRLMKQWVGNGRQERLRLTVSDAALAAAREGISGA
Ga0182040_107978351	3300016387	Soil	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREGMSG
Ga0182037_101068191	3300016404	Soil	MRVAVEVLGSVREPYPEVRQEHVLAMMLRHGAIEVGARRSAMRRVTFQAGEMGFFPRQTERWVGTGDQERLLLCISDSALI
Ga0182037_103819851	3300016404	Soil	MRVSVDVLGSAREPYLQVQDEHVLAMMLRHGTIEVGARRSAMRRVTFQAGEMGFFPRQTERWVGTGDQERLLLCISDSALI
Ga0182037_108992831	3300016404	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERWVGTGHQERLLLSISDA
Ga0182038_105704601	3300016445	Soil	MRVAVDVLGPVGEPCVQVHEDHVLGMMLRPGFIEVGLQRSAMRRVTFQTGDIGFFPRRMERWVGSG
Ga0182038_121479971	3300016445	Soil	VNVVVDVHGSVREPYMRVQDEHVLAMMLRHGGIEVGARRSTMQRVTFQAGEIGFLPRHSERWVGSGNQERLLVGISDVALRAASEEIRGTVELGHWCKMVDVRLAAL
Ga0210404_107658751	3300021088	Soil	MRVAVDVFALAGEPRVQVQYDHVLGMMLRPGFVEVGLQRSAMRRVNFQTGEMGFFPRYMERWVGSGHQERLLLLISDAALRAAREGISHT
Ga0210409_104737243	3300021559	Soil	MRVAVDVLGSIREPYLQVLDENVLAMMLRYGSIEVGARRSAMRHVTFQAGEIGFFPRHTERWVGAGDQERLLLRISDTSLIAACDGISSAAV
Ga0126371_103599133	3300021560	Tropical Forest Soil	MRVAVDVHAPAGEPRVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQTGEMGFFPSRMERWVGTGHQERLLLGI
Ga0126371_111624572	3300021560	Tropical Forest Soil	VKVVVDVHRSAREPYMQVPDEHVLAMMLRHGAIEVGARRSTMHRVMFQAGEMGFHPRHSERWVGS
Ga0209799_10624472	3300027654	Tropical Forest Soil	MTQRMRVAVDVHAPAGEPSVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQTGEMGFFPRRMERW
Ga0209799_11256352	3300027654	Tropical Forest Soil	MKVAVDVLAPVGEPRMQVQDGNVLGMMLRPGFINVGSQRSAMRRVTFQEGEMGFFPRHMERWVGTGHQERLLLRISDAALRAAHEGISGPVELDHKCKM
Ga0209465_100085015	3300027874	Tropical Forest Soil	MRVSVDVHGSAREPYLQVQDEHVLAMMLRHGAIEVGARRSAMRRVTFQAGEMGFFPRQTERWVGAGDQERLLLRISDAA
Ga0209465_104117991	3300027874	Tropical Forest Soil	MKVVVDVHGSVSEPYMQVRDEHVLAMMLRHGTLEVGARRSTMQRETFQAGAVGFLARHSERWVGNGNQERLLLSISDAALSAARE
Ga0318534_101622103	3300031544	Soil	MRVAVDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGHQERLLLRISDAALTAAREGIN
Ga0310915_106568412	3300031573	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERWVGTGHQERLLLSISDAVLRAARERISGAVENG
Ga0318542_101130533	3300031668	Soil	VKVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGEIGFLPRRSELWVGTG
Ga0318572_107368051	3300031681	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGISGAVELGHWC
Ga0318501_103081381	3300031736	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLR
Ga0318494_100742184	3300031751	Soil	VDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGHQERLLLRISDAALT
Ga0307475_101622183	3300031754	Hardwood Forest Soil	MRVAVDVHAPVGEPYAQVQDDHVLGMMLRPGFIEVGLQRSAMRRSTFQAGEMVFFPRRMERWVGTGYQERLLLGISEAALSAAREGISRAVELGPWCEIVDLRLAALGKAV
Ga0307475_105152771	3300031754	Hardwood Forest Soil	MRVAVDVHAPVGELYAEVQDDHVLGIMLRPGVIDVGLQRSAMRRSTFQAGEMVFFPRRMERWVGKGYQERLLLGISEAALSAAREGISRAVEL
Ga0307475_106865931	3300031754	Hardwood Forest Soil	MRVAVDVLGSIREPYLQVLDENVLAMMLRHGSVEVGARRSAMRHVTFQAGEIGFFPRRTERWIGAGDQERLLLRISDTSLIAACDGIR
Ga0318521_108877382	3300031770	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALK
Ga0318546_100078719	3300031771	Soil	VDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGHQERLLLRISDAAL
Ga0318546_101193551	3300031771	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGISGAVELGH
Ga0318546_103067173	3300031771	Soil	MRVAVDVLGSVKDPYIQVQDEHVLAMMLRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTDRWVGAG
Ga0318566_106746911	3300031779	Soil	MRVAVDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRM
Ga0318547_104586592	3300031781	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGIS
Ga0318552_100037331	3300031782	Soil	VDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGHQERLVLRIS
Ga0318565_100644011	3300031799	Soil	VDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFHEGEMGFFPRRMERWVGTGHQERLLLSISDAALRAAREGISGAVDLGHWCRMA
Ga0318497_100655415	3300031805	Soil	VDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQSGEMGFFPRRMERWVGKGHQERLLLRISE
Ga0310917_100679184	3300031833	Soil	MKVAVDVLAPVEEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRTERWVGTGHQERLLLRISDAALRAAREGMSGAVELDHRCKMVDTR
Ga0310917_110937201	3300031833	Soil	VKVVLDVHGSVNEPYMRVQDEHVLAMMLRHGAIEVGASRSTMQRVTFRAGEMGFHPRHSERWVGTGNQERLLLGISDA
Ga0318527_104450321	3300031859	Soil	MRVAVDVLAAVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAEEMGFFPRRMERWVGTGHQERLLLRISDAALR
Ga0306923_119609831	3300031910	Soil	VAIKTSNEAIRGDAKVKVVVDVHGSVREPYVRVPDEHVLAMMLRQGAIEVGARRPTMQRVTFQAGEIGFLPRHSERWVGSGNQ
Ga0306923_121855041	3300031910	Soil	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAARDGMSGAVELGHWCRMV
Ga0306921_119157522	3300031912	Soil	MRVAVDVHESFREPYLQVQDEHVLAMMLRHGAIEVGTRRSAMRRVTFQAGEMGFFPRQTERWVGTGNQK
Ga0306921_122739732	3300031912	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFRAGEMGFFPRRMERWVGTG
Ga0310912_100229394	3300031941	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERCCPESRPRENKRCG
Ga0310912_100452621	3300031941	Soil	MKVAVDVLAPVEEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRTERWVGTGHQERLLLRISDAALRAAREGMSGAVELDHRCKMVDTRLAALVKAV
Ga0310912_109332421	3300031941	Soil	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRA
Ga0310916_116055421	3300031942	Soil	MRVAVDVYVGEPSLQVQDDHFLGMMLRTGFIEVGSQRSTMRRVTFQAGEVGFAPRLMKQWVGNGHQERLRLTVSDAALAAAREGISGAVE
Ga0310913_100404945	3300031945	Soil	MRVAVDVLGSVKDPYMQVQDEHVLAMMLRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTERWVGAGDQERLLFRISDAALVA
Ga0310913_105090741	3300031945	Soil	VKVVVDVHASVREPYMRVQDEHILAMMLQHGAIEVGARRSTMQRVTFQAGAIGFLPRHSERWVGSGNQERLLLGIS
Ga0310910_106839422	3300031946	Soil	VKVVLDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGAIGFLPRHSERWVGSG
Ga0310909_103436362	3300031947	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERRVGTGHQERLLLSISDAVLRAARERISGAVENG
Ga0310909_103553131	3300031947	Soil	MCLRLSESRTCNRDEHVLAMMLRPGFIEVGLQRSAVRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREGMSGAVELGHWCKMVDA
Ga0318530_101441811	3300031959	Soil	MRVAVDVLGSVKDPYMQVQDEHVLAMMLRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTERWVGAGDQERLLFRISDAALVAASDGIG
Ga0318530_104284721	3300031959	Soil	VKVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGEIGFLPRHSERWVGSGNQERLLL
Ga0307479_112546251	3300031962	Hardwood Forest Soil	MQVQDEHVLAMMLRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTERWVGAGDQERLLFRISEAAQMAACDGIGGAVEGHRCKMVDARLAALVPR
Ga0318569_104387351	3300032010	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGISGAVELGHWCKMVD
Ga0318507_105284911	3300032025	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAREGISGAVELGHWCKMVDVRLAALVRVV
Ga0310911_104719161	3300032035	Soil	LLHDGPSIQSAGGVTQRMRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERWVGTGHQERLLLSISDAVLRAARERISGAVENG
Ga0318549_105303591	3300032041	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRIS
Ga0318545_100524191	3300032042	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERW
Ga0318556_103135661	3300032043	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLPISDAALIAAREGISGAVELGHWCKMVDVRLAAL
Ga0318506_100308404	3300032052	Soil	MRVAVDVLGSVKDPYIQVQDEHVLAMMLRHGAIEVGPRRAAMRRVTFQAGEIGFFPRHTERWVGAGDQERLLFRISDAALVAASDG
Ga0318533_111178411	3300032059	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMERWVGTGHQ
Ga0306924_120892711	3300032076	Soil	MRVVVDVLAPVGEPYVQVQDEHVLGMILRPGFIEVGLQRSAMRRVTFQAGEMGFFARRMERWVGT
Ga0318540_101842511	3300032094	Soil	MRVAVDVLAPVGEPHVQVQDEHVLGMMLRAGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRT
Ga0306920_1000746537	3300032261	Soil	VKVVVDVHGSVREPYMRVQDEHVLAMMLRHGAIEVGARRSTMQRVTFQAGEIGFLPRRSELWVGTGNQERLLVGISDTA
Ga0306920_1002176325	3300032261	Soil	MRVAVDVLGPVGEPCVQVHEDHVLGMMLRPGFIEVGLQRSAMRRVTFQTGDIGFFPRRMERWVGSGRQERLLL
Ga0306920_1009410401	3300032261	Soil	MRVAVDVHAPAGEPRVQVQDEHVLGMMLRPGFIEVGLQRSAIRRVTFQTGEMGFFPSRMERWV
Ga0306920_1036865161	3300032261	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIVVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALRAAREGITGAVELGHWCKMVDVRLAALIKAVNA
Ga0310914_100115715	3300033289	Soil	MRVAVDVLAPVGEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQEGEMGFFPRRMEQWVGTGHQERLLLSISDAVLRAARERISGAVENG
Ga0310914_111940652	3300033289	Soil	MKVAVDVLAPVEEPYVQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRTERWVGTGHQERLLLRISDAALRAAREGMSGA
Ga0318519_104416442	3300033290	Soil	MRVAVDVVAPVAEPYLQVQDEHVLGMMLRPGFIEVGLQRSAMRRVTFQAGEMGFFPRRMERWVGTGHQERLLLRISDAALKAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences