Metagenome / Metatranscriptome Family F090932

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090932
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MSRIKRWVDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPGPGA
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	29.63 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.185 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.63% β-sheet: 0.00% Coil/Unstructured: 87.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08044	DUF1707	26.92
PF00005	ABC_tran	10.58
PF07883	Cupin_2	5.77
PF01546	Peptidase_M20	2.88
PF08378	NERD	2.88
PF09423	PhoD	1.92
PF02771	Acyl-CoA_dh_N	1.92
PF00296	Bac_luciferase	1.92
PF13556	HTH_30	0.96
PF07992	Pyr_redox_2	0.96
PF03729	DUF308	0.96
PF13396	PLDc_N	0.96
PF11796	DUF3323	0.96
PF02417	Chromate_transp	0.96
PF03706	LPG_synthase_TM	0.96
PF01965	DJ-1_PfpI	0.96
PF00441	Acyl-CoA_dh_1	0.96
PF14525	AraC_binding_2	0.96
PF01047	MarR	0.96
PF01370	Epimerase	0.96
PF02770	Acyl-CoA_dh_M	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	3.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.92
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.96
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
All Organisms	root	All Organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
cellular organisms	root	All Organisms → cellular organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.30 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9.26 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.85 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.33 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.33 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.33 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.85 %
Mycolicibacterium aubagnense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium aubagnense	1.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02ITNEH	Not Available	547	Open in IMG/M
2170459023\|GZGNO2B02J284C	Not Available	530	Open in IMG/M
3300001546\|JGI12659J15293_10090242	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300004091\|Ga0062387_100603106	Not Available	787	Open in IMG/M
3300005332\|Ga0066388_105597110	Not Available	636	Open in IMG/M
3300005434\|Ga0070709_10005514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6852	Open in IMG/M
3300005435\|Ga0070714_100868121	Not Available	875	Open in IMG/M
3300005435\|Ga0070714_101208277	Not Available	737	Open in IMG/M
3300005437\|Ga0070710_10028971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2966	Open in IMG/M
3300005467\|Ga0070706_101708810	Not Available	573	Open in IMG/M
3300005518\|Ga0070699_101908220	Not Available	543	Open in IMG/M
3300005538\|Ga0070731_10479756	Not Available	828	Open in IMG/M
3300005602\|Ga0070762_10293306	Not Available	1023	Open in IMG/M
3300005610\|Ga0070763_10560947	Not Available	659	Open in IMG/M
3300005712\|Ga0070764_10100344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium aubagnense	1546	Open in IMG/M
3300005764\|Ga0066903_100232688	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300005764\|Ga0066903_106150717	Not Available	628	Open in IMG/M
3300006163\|Ga0070715_10265987	Not Available	903	Open in IMG/M
3300006175\|Ga0070712_100012795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5341	Open in IMG/M
3300006176\|Ga0070765_100141553	Not Available	2136	Open in IMG/M
3300006176\|Ga0070765_100876019	Not Available	849	Open in IMG/M
3300006176\|Ga0070765_100893702	Not Available	840	Open in IMG/M
3300010043\|Ga0126380_11473270	Not Available	601	Open in IMG/M
3300010048\|Ga0126373_10031521	All Organisms → cellular organisms → Bacteria	4589	Open in IMG/M
3300010361\|Ga0126378_10093885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2943	Open in IMG/M
3300010376\|Ga0126381_100078169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4151	Open in IMG/M
3300010376\|Ga0126381_100078169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4151	Open in IMG/M
3300010379\|Ga0136449_100929282	Not Available	1413	Open in IMG/M
3300010379\|Ga0136449_103339644	Not Available	616	Open in IMG/M
3300010398\|Ga0126383_12903005	Not Available	560	Open in IMG/M
3300011120\|Ga0150983_10873469	Not Available	660	Open in IMG/M
3300012201\|Ga0137365_10120353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1975	Open in IMG/M
3300012201\|Ga0137365_10120353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1975	Open in IMG/M
3300016294\|Ga0182041_10900588	Not Available	795	Open in IMG/M
3300017942\|Ga0187808_10096420	Not Available	1283	Open in IMG/M
3300017993\|Ga0187823_10135019	Not Available	767	Open in IMG/M
3300020580\|Ga0210403_10184056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1713	Open in IMG/M
3300020581\|Ga0210399_10287963	Not Available	1371	Open in IMG/M
3300020581\|Ga0210399_10785390	Not Available	778	Open in IMG/M
3300020582\|Ga0210395_10016255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5481	Open in IMG/M
3300020582\|Ga0210395_10337902	Not Available	1132	Open in IMG/M
3300021088\|Ga0210404_10113269	Not Available	1385	Open in IMG/M
3300021170\|Ga0210400_10459908	Not Available	1050	Open in IMG/M
3300021171\|Ga0210405_10144509	Not Available	1883	Open in IMG/M
3300021178\|Ga0210408_10808297	Not Available	734	Open in IMG/M
3300021181\|Ga0210388_10724233	Not Available	865	Open in IMG/M
3300021374\|Ga0213881_10090942	Not Available	1316	Open in IMG/M
3300021402\|Ga0210385_10078487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2262	Open in IMG/M
3300021403\|Ga0210397_10121270	Not Available	1793	Open in IMG/M
3300021406\|Ga0210386_10286614	Not Available	1410	Open in IMG/M
3300021407\|Ga0210383_10347327	Not Available	1278	Open in IMG/M
3300021407\|Ga0210383_11190681	Not Available	640	Open in IMG/M
3300021420\|Ga0210394_10558537	Not Available	1007	Open in IMG/M
3300021432\|Ga0210384_10384739	Not Available	1264	Open in IMG/M
3300021478\|Ga0210402_10026326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5011	Open in IMG/M
3300021560\|Ga0126371_10265778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1834	Open in IMG/M
3300021560\|Ga0126371_10265778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1834	Open in IMG/M
3300021560\|Ga0126371_10327709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1663	Open in IMG/M
3300021560\|Ga0126371_10327709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1663	Open in IMG/M
3300021560\|Ga0126371_11940407	Not Available	707	Open in IMG/M
3300022527\|Ga0242664_1131892	Not Available	539	Open in IMG/M
3300022528\|Ga0242669_1065969	Not Available	647	Open in IMG/M
3300022716\|Ga0242673_1119021	Not Available	528	Open in IMG/M
3300022722\|Ga0242657_1211252	Not Available	541	Open in IMG/M
3300024222\|Ga0247691_1032002	Not Available	805	Open in IMG/M
3300024288\|Ga0179589_10442797	Not Available	599	Open in IMG/M
3300025928\|Ga0207700_10107883	Not Available	2235	Open in IMG/M
3300025928\|Ga0207700_11636037	Not Available	569	Open in IMG/M
3300027867\|Ga0209167_10575275	Not Available	617	Open in IMG/M
3300027879\|Ga0209169_10460512	Not Available	668	Open in IMG/M
3300027908\|Ga0209006_10675208	Not Available	848	Open in IMG/M
3300028023\|Ga0265357_1040509	Not Available	546	Open in IMG/M
3300029701\|Ga0222748_1119127	Not Available	531	Open in IMG/M
3300030862\|Ga0265753_1002637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium aubagnense	1767	Open in IMG/M
3300031231\|Ga0170824_128388873	Not Available	722	Open in IMG/M
3300031708\|Ga0310686_113545500	Not Available	1815	Open in IMG/M
3300031715\|Ga0307476_10076107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2335	Open in IMG/M
3300031753\|Ga0307477_10328400	Not Available	1054	Open in IMG/M
3300031912\|Ga0306921_12510043	Not Available	535	Open in IMG/M
3300032160\|Ga0311301_12512797	Not Available	576	Open in IMG/M
3300032770\|Ga0335085_10011565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13079	Open in IMG/M
3300032770\|Ga0335085_11069397	Not Available	867	Open in IMG/M
3300032783\|Ga0335079_10118161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2994	Open in IMG/M
3300032805\|Ga0335078_10791082	Not Available	1158	Open in IMG/M
3300032828\|Ga0335080_11778085	Not Available	602	Open in IMG/M
3300032829\|Ga0335070_11005215	Not Available	769	Open in IMG/M
3300032892\|Ga0335081_10791004	Not Available	1135	Open in IMG/M
3300032895\|Ga0335074_10004161	All Organisms → cellular organisms → Bacteria	19892	Open in IMG/M
3300032895\|Ga0335074_10015580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10688	Open in IMG/M
3300032895\|Ga0335074_10015663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10661	Open in IMG/M
3300032895\|Ga0335074_10019345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9614	Open in IMG/M
3300032895\|Ga0335074_10174281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2674	Open in IMG/M
3300032895\|Ga0335074_10218456	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300032895\|Ga0335074_10323610	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1740	Open in IMG/M
3300032895\|Ga0335074_10386816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1528	Open in IMG/M
3300032895\|Ga0335074_10650311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1034	Open in IMG/M
3300032895\|Ga0335074_10863567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300032895\|Ga0335074_11261792	Not Available	615	Open in IMG/M
3300032895\|Ga0335074_11268551	Not Available	613	Open in IMG/M
3300032896\|Ga0335075_10048748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5917	Open in IMG/M
3300032896\|Ga0335075_10049048	All Organisms → cellular organisms → Bacteria	5896	Open in IMG/M
3300032896\|Ga0335075_10153832	All Organisms → cellular organisms → Bacteria	2860	Open in IMG/M
3300032896\|Ga0335075_10293929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1823	Open in IMG/M
3300032898\|Ga0335072_10038675	All Organisms → cellular organisms → Bacteria	6545	Open in IMG/M
3300032898\|Ga0335072_10382296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1521	Open in IMG/M
3300032955\|Ga0335076_10145390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2288	Open in IMG/M
3300032955\|Ga0335076_10289624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1528	Open in IMG/M
3300033134\|Ga0335073_10555280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1295	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.30%
Aquatic	Environmental → Aquatic	2.78%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.37%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.93%
Loam	Environmental → Terrestrial → Soil → Loam	21.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	25.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	25.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_09711080	2170459010	Grass Soil	VSKIKRWLDHRRVVWTEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPGRGALDVIGVLALPSPRDIRA
FA3_05984390	2170459023	Grass Soil	VSKIKRWLDHRRVVWTEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLTLSGLGIT
JGI12659J15293_100902422	3300001546	Forest Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDV*
Ga0062387_1006031061	3300004091	Bog Forest Soil	MIKRWRIQRRVVWSEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDV*
Ga0066388_1055971102	3300005332	Tropical Forest Soil	MARIKRWLMGKRRIVWTEPALPKYVKINPNSPPGAAASDGLQPGDMSMLSVAEEFLAEPEEDDDTA*
Ga0070709_100055145	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEDGLALPGPRDVPA*
Ga0070714_1008681212	3300005435	Agricultural Soil	MIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGLGIT*
Ga0070714_1012082772	3300005435	Agricultural Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPE*
Ga0070710_100289713	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPGPRDVRA*
Ga0070706_1017088101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEDGLALPGPRDVP
Ga0070699_1019082202	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALPYPRDVPARC
Ga0070731_104797562	3300005538	Surface Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPDEGLALPDPRDVRA*
Ga0070762_102933062	3300005602	Soil	MSRIKRWVDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPGPGA*
Ga0070763_105609472	3300005610	Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPGPRDVPA*
Ga0070764_101003442	3300005712	Soil	MSRIKRWVDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSSPGALPDV*
Ga0066903_1002326884	3300005764	Tropical Forest Soil	MSRIRRWLIGERQVIWSEPALPKYVKINPLSPPGAAATADGLQPGDMSMLGVAEEFLATEDPEEDEMA*
Ga0066903_1061507172	3300005764	Tropical Forest Soil	MARIKRWLMGKRRIVWSEPALPPYVKINPNSPPGAAAGDGLQPGDMSMLSVAEEFLQEPEEDDDKA*
Ga0070715_102659872	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEDGLALPGPRGLPA*
Ga0070712_1000127953	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRWRIQRRVVWSEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGLGIT*
Ga0070765_1001415532	3300006176	Soil	MSRIKRWLDHRRVVWSEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSGPDALPDV*
Ga0070765_1008760192	3300006176	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSAPRDVPA*
Ga0070765_1008937021	3300006176	Soil	MSRIKRWVDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALS
Ga0126380_114732702	3300010043	Tropical Forest Soil	MSRIRRWLIGERQIIWSEPALPKYVKINPLSPPGAAAADGLQPGDMSMLGVAEEFLATEDPGEDEMA*
Ga0126373_100315215	3300010048	Tropical Forest Soil	MARIKQWLMGKRRIVWTEPALPKYVKINPNSPPGAAASDGLQPGDMSMLSVAEEFLAEPEEDDDTA*
Ga0126378_100938852	3300010361	Tropical Forest Soil	MSRIRRWLIGERQVIWSEPALPKYVKINPLSPPGAAATEDGLQPGDMSMLGVAEEFLATEDPEEDEMA*
Ga0126381_1000781696	3300010376	Tropical Forest Soil	MPRIKQWLIGERQVIWSEPALPKYVKINPNSPPGAAADGLQPGDMSMLSVAEEFLATEDPEEDEMA*
Ga0126381_1000781697	3300010376	Tropical Forest Soil	MTRIKRWLMGKRRIVWSEPALPPYVKINPNSPPGAAADGLQPGDMSMLSVAEEFLAT
Ga0136449_1009292823	3300010379	Peatlands Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSDPRDVPA*
Ga0136449_1033396442	3300010379	Peatlands Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKGAEEFLEEPEEGLALPHPLDVRA*
Ga0126383_129030051	3300010398	Tropical Forest Soil	MPRIKQWLIGERQVIWSEPALPKYVKINPNSPPGAAADGLQPGDMSMLSVAEEFLQEPEEDDDTA*
Ga0150983_108734691	3300011120	Forest Soil	KRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPNPRDVPA*
Ga0137365_101203532	3300012201	Vadose Zone Soil	MPRIKRWLIGKRQVIWSEPALPKYVKINPLSPHSAAAADGLQPGDMSMLSVAEEFLATEDPEEDEMA*
Ga0137365_101203533	3300012201	Vadose Zone Soil	MARIKRWLMGKRRIVWSEPALPKYVKINPNSPPGAAAADGLQPGDMSMLRVAEEFLEAPEEDDDDTA*
Ga0182041_109005881	3300016294	Soil	MSKIKRWLDQRRVVWTEPALPKFVKINPGSPPGAAEGLQPGDITMARVAEEFLETPEDEELA
Ga0187808_100964202	3300017942	Freshwater Sediment	MSKIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGIT
Ga0187823_101350192	3300017993	Freshwater Sediment	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPRDVRA
Ga0210403_101840563	3300020580	Soil	LPDMSRIKRWLDQRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPRDVRA
Ga0210399_102879632	3300020581	Soil	MSRIKRWLDQRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSDPRDVPA
Ga0210399_107853902	3300020581	Soil	MSKIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPAAPGGLFGFILM
Ga0210395_100162555	3300020582	Soil	MLKIRRWFTDQQRVIWSEPALPKYVKINPLSPPGAAEGLQPGDISMLRVAEEFLENAEEFPEAPEEGVV
Ga0210395_103379022	3300020582	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDV
Ga0210404_101132693	3300021088	Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDV
Ga0210400_104599081	3300021170	Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSSPGALP
Ga0210405_101445091	3300021171	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSGPGALPDVQARDGPSDPHP
Ga0210408_108082972	3300021178	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSGPDALPDV
Ga0210388_107242332	3300021181	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSSPGALPDV
Ga0213881_100909423	3300021374	Exposed Rock	MGKIKRWLLDRQQVVWSEPELPKYVKINPLSPPGAAEGIQPGDFSMLKITEEFLEKDEDFGEVPEEGLALPGPRGVTGR
Ga0210385_100784873	3300021402	Soil	MVKIKRWFMDKQRVVWSEPALPKFVKINPLSPPGAAQGLQPGDISMLRVAEEFLEEAEEFPEAPHP
Ga0210397_101212704	3300021403	Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSGPGALSDVWPRTARP
Ga0210386_102866142	3300021406	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPDEGLALPDPRDVRA
Ga0210383_103473271	3300021407	Soil	MSKIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPRDVR
Ga0210383_111906811	3300021407	Soil	MSRIKRWLDQRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPE
Ga0210394_105585372	3300021420	Soil	WMDRRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPGPLDVRA
Ga0210384_103847392	3300021432	Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPRDVRA
Ga0210402_100263266	3300021478	Soil	MSKIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSDPRDVPA
Ga0126371_102657782	3300021560	Tropical Forest Soil	MARIKRWLMGKRRIVWSEPALPPYVKINPNSPPGAAAGDGLQPGDMSMLSVAEEFLEEPEEDDDKA
Ga0126371_102657783	3300021560	Tropical Forest Soil	MPRIKRWLIGKRQVIWSEPALPKYVKINPLSPPGAPAADGLQPGDMSMLSVAEEFLASEDPEKDPMA
Ga0126371_103277092	3300021560	Tropical Forest Soil	MARIKQWLMGKRRIVWTEPALPKYVKINPNSPPGAAASDGLQPGDMSMLSVAEEFLAEPEEDDDTA
Ga0126371_103277093	3300021560	Tropical Forest Soil	MSRIRRWLIGERQVIWSEPALPKYVKINPLSPPGAAATADGLQPGDMSMLGVAEEFLATEDPEEDEMA
Ga0126371_119404072	3300021560	Tropical Forest Soil	MSKIKRWLDKRRVVWTEPALPKYVKINPLSPPGAAEGIQPGDFSMLKVTEEFLAEDEEFAEAPEQGLALR
Ga0242664_11318922	3300022527	Soil	RRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPD
Ga0242669_10659692	3300022528	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEAPEEGPALSGPGALPDV
Ga0242673_11190212	3300022716	Soil	WMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDV
Ga0242657_12112522	3300022722	Soil	MSKIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPRDVRA
Ga0247691_10320022	3300024222	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEDGLALPGPRGLPA
Ga0179589_104427972	3300024288	Vadose Zone Soil	MIKRWLDHRRVVWTEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGLGIT
Ga0207700_101078833	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGLGIT
Ga0207700_116360372	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPE
Ga0209167_105752751	3300027867	Surface Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLKEPDEGLALPDPRDV
Ga0209169_104605122	3300027879	Soil	MSRIKRWVDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSSPGALPDV
Ga0209006_106752082	3300027908	Forest Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGMALSGPGALPDVWAQCRLANSVSV
Ga0265357_10405091	3300028023	Rhizosphere	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGMALSGPGALPDVWAQCRLANSVSVSRARR
Ga0222748_11191271	3300029701	Soil	RIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPALSGPDALPDV
Ga0265753_10026372	3300030862	Soil	MSRIKRWMDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGMALSGPGALPDV
Ga0170824_1283888732	3300031231	Forest Soil	VSKIKRWLDHRRVVWTEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGVTLSGLGIT
Ga0310686_1135455001	3300031708	Soil	MSRIKRWLDHRRVVWSEPALPKYVKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGLVTGRLGP
Ga0307476_100761075	3300031715	Hardwood Forest Soil	MDRRRVVWSEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALSGPGALPDVRARDRPPHQHP
Ga0307477_103284002	3300031753	Hardwood Forest Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGPGVI
Ga0306921_125100432	3300031912	Soil	MSKIKRWLDKRRVVWAEPALPKYVKINPLSPPGAAEGIQPGDFSMLKITEEFLAEAD
Ga0311301_125127971	3300032160	Peatlands Soil	LDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPHPRDVRA
Ga0335085_100115659	3300032770	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAADGLQPGDMSMLKVAEEFLEEPEEGLALPHPLDVRA
Ga0335085_110693972	3300032770	Soil	MGKIKRWLDKQQLVWSEPALPKYVKINPLSPPGAAEGVQPGDFSMLKITEEFLENDEDFGEAPEEGLALSGPRDVPA
Ga0335079_101181613	3300032783	Soil	MGKIKQLVWSEPALPKYVKINPLSPPGAAEGVQPGDFSMLQISEEFLESDEDFGEAPEEGLALPGPRDVPA
Ga0335078_107910822	3300032805	Soil	MGKIKRWLDKQQLVWSEPALPKYVKINPLSPPGAAEGVQPGDFSMLQISEEFLESDEDFGEAPEEGLALPGPRDVPA
Ga0335080_117780851	3300032828	Soil	EPALPKFVKINPLSPPGAAEGVQPGDFSMLQISEEFLESDEDFGEAPEEGLALPGPRDVP
Ga0335070_110052151	3300032829	Soil	MGKIKRWLDKQQLVWSEPALPKYVKINPLSPPGAAEGVQPGDFSMLKITEEFLEESEDFPEAAEEGLA
Ga0335081_107910041	3300032892	Soil	MGKIKRWLDKQQLVWSEPALPKYVKINPLSPPGAAEGVQPGDFSMLQISEEFLESDEDF
Ga0335074_1000416110	3300032895	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAADGIQPGDFSMAKIAEEFLEEGEEFPEGPEAPEEGLA
Ga0335074_1001558010	3300032895	Soil	MGKIKRWLLDRQQVAWSEPELPKYVKINPLSPPGAAEGIQPGDFSMLKIAEEFLEKDEDFVEAPDEGLA
Ga0335074_100156632	3300032895	Soil	MVKFKRWFKDRQKVIWSEPELPKYVKINPLSPPGSAEGLQPGDISMLRVAEEFLEEAEEFLEGPEAPEEGMA
Ga0335074_100193453	3300032895	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPHPPDVPA
Ga0335074_101742813	3300032895	Soil	MVNIKRWFTEKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEEAEEFPEAPEEGLA
Ga0335074_102184561	3300032895	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAADGIQPGDFSMAKIAEEFLEETEEFPEAPEEGLA
Ga0335074_103236102	3300032895	Soil	MVNIKRWFTEKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEEAEELPEAPEEGLA
Ga0335074_103868162	3300032895	Soil	MGKIKRWLLDRQQVAWSEPELPKYVKINPLSPPGAAEGVQPGDFSMLKIAEEFLEKDEDFVEAPDEGLALPGRVTGRPVR
Ga0335074_106503111	3300032895	Soil	MGKMKRWLDKRRVVWTEPALPKYVKINPLSPPGAAEGIQPGDFSMLKIAEEFLEEPEAPEEGLALPDPRAT
Ga0335074_108635671	3300032895	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEETEEFPE
Ga0335074_112617921	3300032895	Soil	VNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEEGEEAPEEGLA
Ga0335074_112685512	3300032895	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPHPLDIQA
Ga0335075_100487485	3300032896	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEETEEFPEAREEGLA
Ga0335075_100490482	3300032896	Soil	MSKIKRWLLGRQQVIWSEPELPPYVKINPLSPPGAAEGLQPGDFSMLRVAEEFLEKDEDFGEAPDEGLALPGRATGRPVQ
Ga0335075_101538323	3300032896	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAADGIQPGDFSMAKIAEEFLEEGEEFPEAPEEGLA
Ga0335075_102939293	3300032896	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAAEGIQPGDFSMAKIAEEFLEEGEEAPEEGLA
Ga0335072_100386757	3300032898	Soil	MSKIKRWLDKRRVVWAEPALPKYVKINPLSPPGAAAGVQPGDFSMLQIAEEFLEGDEEFGEAPDEGPALP
Ga0335072_103822962	3300032898	Soil	MVNIKRWFTDKHREVWSEPALPKYVKINPLSPPGAADGIQPGDFSMAKIAEEFLEE
Ga0335076_101453903	3300032955	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPHPLDIPA
Ga0335076_102896242	3300032955	Soil	MSRIKRWLDHRRVVWTEPALPKYIKINPNSPPGAAEGLQPGDMSMLKVAEEFLEEPEEGLALPDPHWT
Ga0335073_105552802	3300033134	Soil	MGKIKRWLLDRQQVAWSEPELPKYVKINPLSPPGAAEGIQPGDFSMLKIAEEFLEKDEDFVEAPDEGLALPGVIIPGTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090932

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences