Metagenome / Metatranscriptome Family F090915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090915
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	131 residues
Representative Sequence	MKQLWDRWAPLTGLLSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVVGFFVFLAGILLLLAFLATLRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANES
Number of Associated Samples	92
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.30 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	96.30 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 67.57% β-sheet: 0.00% Coil/Unstructured: 32.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07730	HisKA_3	11.11
PF00196	GerE	1.85
PF01139	RtcB	0.93
PF07947	YhhN	0.93
PF10604	Polyketide_cyc2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	11.11
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	11.11
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	11.11
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	11.11
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.93
COG3714	Uncharacterized membrane protein YhhN	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	96.30 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	88.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.85 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.93 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.89 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.93 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.89 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.89 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Geodermatophilaceae bacterium URHB0048	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	0.93 %
Frankia discariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.89 %
Arthrobacter sp. Leaf69	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Leaf69	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Geodermatophilaceae bacterium URHB0048	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	0.93 %
Frankia discariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402HP2KB	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300000956\|JGI10216J12902_103897930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1531	Open in IMG/M
3300004114\|Ga0062593_102788371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300004643\|Ga0062591_100563496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300005093\|Ga0062594_100025159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2604	Open in IMG/M
3300005171\|Ga0066677_10170451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1203	Open in IMG/M
3300005171\|Ga0066677_10440139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300005174\|Ga0066680_10173443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1357	Open in IMG/M
3300005176\|Ga0066679_10671171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300005177\|Ga0066690_10597534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300005177\|Ga0066690_10907845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300005180\|Ga0066685_10940133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005180\|Ga0066685_11079650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005184\|Ga0066671_10136258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1413	Open in IMG/M
3300005332\|Ga0066388_100832876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1511	Open in IMG/M
3300005332\|Ga0066388_101485785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300005363\|Ga0008090_12199116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005434\|Ga0070709_10421600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1000	Open in IMG/M
3300005434\|Ga0070709_11097231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300005435\|Ga0070714_100916565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300005437\|Ga0070710_10760399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300005437\|Ga0070710_10967249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300005447\|Ga0066689_10354690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300005526\|Ga0073909_10159685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300005546\|Ga0070696_100499275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300005554\|Ga0066661_10445972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	791	Open in IMG/M
3300005556\|Ga0066707_10576772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300005576\|Ga0066708_10361056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300005587\|Ga0066654_10675213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300005615\|Ga0070702_100832036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300005617\|Ga0068859_101306621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300006028\|Ga0070717_10438364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300006031\|Ga0066651_10327163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300006046\|Ga0066652_101528249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300006046\|Ga0066652_102096924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006163\|Ga0070715_10595291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300006173\|Ga0070716_100681175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300006175\|Ga0070712_101355947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300006358\|Ga0068871_101445794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	649	Open in IMG/M
3300006574\|Ga0074056_11403856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300006791\|Ga0066653_10009729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3297	Open in IMG/M
3300006796\|Ga0066665_10727173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300006806\|Ga0079220_10078824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1647	Open in IMG/M
3300006871\|Ga0075434_101302844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300006871\|Ga0075434_101959411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300006954\|Ga0079219_10403059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300006954\|Ga0079219_12507264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300009012\|Ga0066710_102356222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300009012\|Ga0066710_104832634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300009137\|Ga0066709_101221466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300009137\|Ga0066709_102909005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300009162\|Ga0075423_13203708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300010043\|Ga0126380_11956062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010047\|Ga0126382_10844889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300010320\|Ga0134109_10442527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300010322\|Ga0134084_10442853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300010333\|Ga0134080_10490221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300010335\|Ga0134063_10779566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300010336\|Ga0134071_10755904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300010337\|Ga0134062_10388128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300012198\|Ga0137364_10621469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300012206\|Ga0137380_11031393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300012208\|Ga0137376_10302016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1389	Open in IMG/M
3300012208\|Ga0137376_10603383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300012210\|Ga0137378_11250542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300012356\|Ga0137371_11195022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012927\|Ga0137416_11458792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300012957\|Ga0164303_10595103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300012958\|Ga0164299_11364487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300012961\|Ga0164302_11349660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012986\|Ga0164304_10255715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300012987\|Ga0164307_10414684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300012987\|Ga0164307_10886230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300014497\|Ga0182008_10560837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300015371\|Ga0132258_12815332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300017939\|Ga0187775_10517491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300018433\|Ga0066667_10069512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	2220	Open in IMG/M
3300018482\|Ga0066669_11402182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300018482\|Ga0066669_11611985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300018482\|Ga0066669_11639471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300025898\|Ga0207692_11005178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Leaf69	551	Open in IMG/M
3300025906\|Ga0207699_11036711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300025910\|Ga0207684_11123671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300025916\|Ga0207663_10383921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300025924\|Ga0207694_11393143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300025927\|Ga0207687_11821482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300025929\|Ga0207664_11782173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300025941\|Ga0207711_11967285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300026023\|Ga0207677_11355706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300026330\|Ga0209473_1205938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300026335\|Ga0209804_1122507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300026523\|Ga0209808_1121246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300026530\|Ga0209807_1139248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300026530\|Ga0209807_1288361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300026532\|Ga0209160_1029919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3452	Open in IMG/M
3300026542\|Ga0209805_1080202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1577	Open in IMG/M
3300026550\|Ga0209474_10592879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300027725\|Ga0209178_1238951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300027765\|Ga0209073_10179588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300027821\|Ga0209811_10165931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300028720\|Ga0307317_10219603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Leaf69	642	Open in IMG/M
3300031764\|Ga0318535_10493906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300031779\|Ga0318566_10132219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300031835\|Ga0318517_10245815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300031854\|Ga0310904_10538311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300032180\|Ga0307471_100607975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300032205\|Ga0307472_102719561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300033158\|Ga0335077_10810820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.81%
Host-Associated	Host-Associated	10.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.81%
Plants	Host-Associated → Plants	10.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.44%
Loam	Environmental → Terrestrial → Soil → Loam	18.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_04688990	2070309009	Soil	MKQLSERWTPLAGVLAVVCSLVGVLHVLNQPQTKDSNAKITAYFADHSHRVQGAVSFFVYLAGIVFLLVFLSALRERLLAAEGQPGRLSALAFGAGVAALPLWGISMLLANAMSFTVSESAAFTVDPNTYRLLGV
JGI10216J12902_1038979301	3300000956	Soil	MKQLLDRWAPLTGPVAVACSLVGVLFALNQPQDKDSDAKIVAYFGSHSHRVHGVIGFFVFLVGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRLDPNTFRLLADTAYFAWVAAVVVSAVVV
Ga0062593_1027883711	3300004114	Soil	MKQLWERWAPLTGVISVACSLVGVILVLDQPQTEDSNAKIAAYFADHSHRVQGIVGFFVFLIGILFLLAFLGTLRERLLAAEGQPGRLSALAFGAGVASLPLWGISMLLAHAVSFTVSESSSFALDPNTFRLLSVASYITWVAALFVSSVIVWATSAVALRTRVLP
Ga0062591_1005634961	3300004643	Soil	MKQLWDRWAPLAGVLSVACSFVGVMLALNQPQDKDSDAKIVAYFAKHSHRVQGLIGFFVFLVGILLLLAFLAALRERLLAAEGQAGRLSALAYGSGIASVPFWGVSMLLANAAT
Ga0062594_1000251591	3300005093	Soil	MTQLWERWGPLAGVLSVVCSLFGVLVVLNQPQDGDSDPKIVAYFSNHSHRAQGIAGFFVFLAGILFLLVFLSALRERLRAAESHPGGLSALAFGAGIASLPLWALSMLLANAATFASNESSSFRLD
Ga0066677_101704513	3300005171	Soil	MKQLWDRWAPLTGLLSVACSLIGVMLVLNQPQDKDSDAKIAAYFANHSHRVHGVVGFFVFLAGILLLLAFLAGLRDRLLAAEGQPGRLSTLAFGAGIATLPLWAVSMLLANAAGFAANESSAFRVDPNTFRMLADTAYF
Ga0066677_104401392	3300005171	Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLGQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFLAGILFLLAFLSSLRERLLAAEGESGRLSALAFGAGIASLPLWGVSMLLAFAASFTSGESSKFRLDPNTYRLLST
Ga0066680_101734431	3300005174	Soil	MKQLWDRWAPLTGLLSVACSFVGVMLVLDQPQDKDSDAKIVAYFAKHSHRVQGVVGFFVFLAGILLLLAFLAALRDRLLAAEGQPGRLSALAFGSGVASVPFWGVSMLLANAAGFASNETSSFHLDANT
Ga0066679_106711712	3300005176	Soil	MKQLWDRWAPLTGLLSVACSLIGVMLVLNQPQDKDSDAKIAAYFANHSHRVHGVVGFFVFLAGILLLLAFLAGLRDRLLAAEGQPGSLSALAFGAGIATLPLWAVSMLLANAAGFAANESSAFRVDPNTF
Ga0066690_105975342	3300005177	Soil	MKPLWDRWAPLTGVLSVVCSFVGVMLVLGQPQDKDSDAKIVAYFTQHSHRVQGVVGFFVFMAGVLLLLAFLATLRERLLAFEGRLGRLSALVFGAGLTS
Ga0066690_109078451	3300005177	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAEIAAYFAGHSHRVHGIVGFFVFLAGILLLLAFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSML
Ga0066685_109401331	3300005180	Soil	MKQLGNRWAPLAGVLSVVCSLVGVLFVLNQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLGSLRERLLAVEGASRRLAALAFGAGIARLPLWGVSMLLAFAASFTSGESSKFQLDPNTYRLLSTTSYFAWVAALIVSAVVVWATSAL
Ga0066685_110796501	3300005180	Soil	MKQLWDRWAPLTGLLSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVVGFFVFLAGILLLLAFLATLRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANES
Ga0066671_101362581	3300005184	Soil	MKQLWDRWAPLTGLLSVACSLAGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRLDP
Ga0066388_1008328761	3300005332	Tropical Forest Soil	VKQLQERWAPLAGLISVACSLVGVMLVLNQPQTKDSDAKISAYFADHSHRVHSAVGFFVFLAGILFLLAFLGSLRERLLEAEGQTGRLSALAYGAGVATLPLWGISMLLANVVSFTVGESSSFTVDPNTYRLLSVASYFTWVIALFVSSV
Ga0066388_1014857852	3300005332	Tropical Forest Soil	MNRIWERWAPLAGVISVACSLVGVMFVLNQPQSKDSNAKIVAYFGDHSNRVHGVVSFFVFLAGILFLLVFLGSLRERLLAAEGQPGRLSALAFGAGIASVPLWAASMLLANASSFAAGESSSFRLDPNTYRLLADTSYFAWVAALAVSSVVI
Ga0008090_121991161	3300005363	Tropical Rainforest Soil	APLTGVVSVACSLVGVMVVLNQPQTKDSDAKIAGYFADHAHRVQGAVGFFVFLAGTLFLLAFLGTLRERLLAGEGPTGRVTALAFGAGIASLPLWAISMLLANAVSLTASESSSFTLDPNTFRLLSVVSYATWVAALFVSSVLVWATSAVALRTAVLPRWYALAGVAVGIV
Ga0070709_104216001	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLLERWAPLAGLVAVACSFVGVMFALDQPQDKDSNAKIAAYFADHSHRVHAVIGFFVFLAGLLFLLVFLAALRERLLVAEGRPGRLTALAFGAGVASLPLWAVSMLLANAASFAVNESPAFRLDPNTFRLLADTAYFAWVAAI
Ga0070709_110972312	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWERWAPLTGLVAVACSLVGVMLALDEPQDKDSDAKIVAYFADHSHRVQGVIGFFVFLTGILFLLAFLATLRDRLLDAEGQPGPLSALAFGAGIASLPLWAFSMLLANAANFATTESRAF
Ga0070714_1009165652	3300005435	Agricultural Soil	MKQLWDRWGPLTGVLSVVCTFVGILFALNQPQAKDSNAKIVAYFADHSHRVQAIVGFFVFLAGLLLLLMFLTALRERLLAAEGGAGRLSALAFGGGIASLPLWAVSMLLAYAVSF
Ga0070710_107603991	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFMS
Ga0070710_109672492	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWDRWGPLTGVLSVVCSLVGILFALNQPQAKDSNVKIVAYFADHSHRVQAIVGFFVFLAGLLLLLMFLTALRERLLAAEGGAGRLSALAFGGGIASLPLWAVSMLLAYAVSFAANE
Ga0066689_103546901	3300005447	Soil	MKQLWDRVGPLAGLLSVACSFVGVMLVLGQPQDKDSDPKIVAYFANHSHQVQGVVGFFVFLVGILFLLTFLAALRERLLAAEGQPGLCALVFGAGVASLPLW
Ga0073909_101596851	3300005526	Surface Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFMSSV
Ga0070696_1004992752	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVGYFANHSHRVHGLIGFFVFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSM
Ga0066661_104459721	3300005554	Soil	MKQLWDRWAPLTGLLSVACSLIGVMLVLNQPQDKDSDAKIAAYFANHSHRVHGVVGFFVFLAGILLLLAFLAGLRDRLLAAEGQPGSLSALAFGAGIATLPLWAVSMLLANAA
Ga0066707_105767722	3300005556	Soil	MKQLWDRWAPLTGLLSVACSLVGVMLALNQPQDKDSNAKIAAYFANHSHRVLGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIA
Ga0066708_103610562	3300005576	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAKIAAYFAGHSHRVHGVVGFFVFLAGILLLLGFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAASFAANESSAFRLDPNTFRMLADTAYFAWVAAVVVSSVIVWATSAV
Ga0066654_106752131	3300005587	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAKIAAYFAGHSHRVHGVVGFFVFLAGILLLLAFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAA
Ga0070702_1008320362	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGLIGFFVFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAAN
Ga0068859_1013066211	3300005617	Switchgrass Rhizosphere	MTQLWERWGPLAGVLSVVCSLFGVLVVLNQPQDGDSDAKIVAYFSNHSHRAQGIAGFFVFLAGILFLLVFLSALRERLRAAESHPGGLSALAFGAGIASLPLWALSMLLANAATFASNESSSFRLDPSTFRMLADTAYFTWVAAVAISSVVVWATSAVALRTGA
Ga0070717_104383642	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWERWAPLTGLLAVACSLVGVMPALDQPQDKDSDAKIVAYFADHTNRVHGVIGFFVFLVGILFLLVFLATLRDRLLSAEGQPGRLSALAFGAGIASLPLWAVSMLLADAASFASNESSAFQLDANTFRLLADTAYYSWVAAAVVSSVV
Ga0066651_103271632	3300006031	Soil	MKQLWDRWAPLTGVLSVACSLVGVMFVLNQPQDKDSNAKIVAYFADHAHRVNSIVGFFVFLAGILLLLTFLAALRERLLAGEGQPGRLSALAFGAGVASLPLWAVSMLLANAPSFAANESSSFRLDPNTFRLLADTAYFAWVAAVVVSSVVVWATSALALRTGVLPR
Ga0066652_1015282491	3300006046	Soil	VTSLLDRWAPLTGALSVACSFVGVMIVLNQPQDKDSDAKIAAYFDQHSHRVQGVVGFFVFLAGMLLLLAFLASLRERLLPAEGPGGRITALVFGAGIASLPLWGVSILLA
Ga0066652_1020969241	3300006046	Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLDQPQDKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLGSLRERMLAAEGESGRLSALAFGAGIASLPLWGVSMLLANAPGLASGESSSFKLDPNTYRLLSTTSYYAWVAALIVSAVVVWATSALA
Ga0070715_105952911	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGLIGFFVFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSA
Ga0070716_1006811751	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVA
Ga0070712_1013559471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTQLWERWGPLAGVLSVVCSLFGVLVVLNQPQDGDSDPKIVAYFSNHSHRAQGIAGFFVFLAGILFLLVFLSALRERLRAAESHPGGLSALAFGAGIASLPLWALSMLL
Ga0068871_1014457941	3300006358	Miscanthus Rhizosphere	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLVADTSYFAWVAALFMSSVVVWSTSAAALRTGV
Ga0074056_114038561	3300006574	Soil	MKLLDRWAPLTGLVAVACSLVGVMLVLNQPQDKDSNTKIVAYFGNHSHRVHGVIGFFVFLVGLLFLLAFLGALRERLLGAEGQPGRLSALAFGAGIASVPLWAVSMLLANAASFAANESSAFRVDPNTFRMLADTAYFAWVAAVVV
Ga0066653_100097291	3300006791	Soil	MKRLWDRWAPLTGVLSVACSLVGVMFVLNQPQDKDSNAKIVAYFADHAHRVNSIVGFFVFLAGILLLLAFLAALRERLLAGEGQPGRLSALAFGAGIASLPLWAVSMLLANAAGFAANESSAFRVDPNTFRMLADTAYFAWVAAAI
Ga0066665_107271732	3300006796	Soil	MKQLGNRWAPLAGVLSVVCSLVGVLFVLNQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLGSLRERLLAAEGQPSRLSALAFGAGIASLPLWGVSMLLAYGASLASGESSSFKLDPNTYRLLS
Ga0079220_100788241	3300006806	Agricultural Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSKRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFMSS
Ga0075434_1013028441	3300006871	Populus Rhizosphere	MTELWDRWSPLTGPLSVACSFVGVMLVLGQPQDKDSDAKIVAYFADHSHRVQGLVGFFVFLAGILLLLAFLAALRERLVAAEGQPGRFSALAFGAGVASVPLWCTSMLFANAAGFASNETSSFRLDANTFRLFADTAYFAW
Ga0075434_1019594112	3300006871	Populus Rhizosphere	MKLWDRWAPLTGLLSVACSLVGILFALNQPQDKDSNAKIVAYFANHTHRVYGIVGFFVFLVGLLLLLAFLTALRERLLEAEGQPGRLSALAFGGGIASLPLWAVSMLLAYAAS
Ga0079219_104030592	3300006954	Agricultural Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAASSS
Ga0079219_125072642	3300006954	Agricultural Soil	MQKSWDRWGPLTGPVSVACSFVGVMLVLGQPQSKDGDAKIAAYFADRAHRTQGIVGFFVFLAGMILLIAFLSALRDRLFAAERQPGRLSALAFGAGIASVPVWGVSMLLANAAAFASSESSTF
Ga0066710_1023562221	3300009012	Grasslands Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLDQPQEKDSNAKIVAYFAQHSNQVRGVVGFFVFFAGILFLLAFLGSLRERLLAAEGQPGRLSALAFGAGIASLPLWGVSMLLAYGASLASGESSSFKLDPNTYRVLSTTSYYA
Ga0066710_1048326341	3300009012	Grasslands Soil	MKQLWDRWAPLTGVLSVACSFVGIMLVLDQPQDKDSDAKIVAYFAEHSHRVKGVVGFFVFLAGLVFLVAFLAALRERLLAAEGGSGRSSALVFGAGVASVPLWGISIMLANAASFASNESSAFRLDPNTFRLLADTAYFAWVAAVIVSSLVVWGTSAVA
Ga0066709_1012214661	3300009137	Grasslands Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAKIAAYFAGHSHRVHGVVGFFVFLAGILLLLGFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAGSFAANESSAFRL
Ga0066709_1029090051	3300009137	Grasslands Soil	MRQLWNRWGPLAGVLSVACSFVGTMLVLRQPQAKESDGAIVAYFAQHSNRVQGVVGFFVFTAGLLLLLTFFANLRERLLVAEGQPGWLTALAFGAGVASIPLWGVSMLPANATSFSALESSAFHPDPNPFCLFRVAS
Ga0075423_132037081	3300009162	Populus Rhizosphere	MKQLWDRWAPLTGLLSVACSLVGVMFALNQPQDKDSNAKIVAYFANHTHRVYGIVGFFVFLVGLLLLLAFLTALRERLLEAEGQPGRLSALAFGGGIASLPLWAVSMLLAYAASFAATESSAFRLDPNTFRVLADTAYFAWVAAVVVSSVVVS
Ga0126380_119560622	3300010043	Tropical Forest Soil	MEEPHMKAIWDRWAPLAGVISVACSFVGILFVLNQPQSNASDAKVVAYFGVQSNRLHGEVGFFVFLAGILLLLVFLGALRERLLAAEGQPGRMAALAYG
Ga0126382_108448892	3300010047	Tropical Forest Soil	MKQLLERWAPLAGVISVVCSVVGVLAVLNQPEDKNSDAQIVAYFTSHSHRVHGAVGFFVFLAGMLFLLAFFAALRDRLLTAEGQPGRLSALAFGAGIASLPLWAVSMILANAGSFTVGETSSFHLDPNTYRLLSDTSYFAWVAALFVSSVVVWA
Ga0134109_104425271	3300010320	Grasslands Soil	SAVRLTRRSTSPPTTARPQRHTFDAIVNREGGFEMKLWDRWAPLTGVLSVACSLVGVMFVLNQPQDKDSNAKIVAYFADHAHRVNSIVGFFVFLAGILLLLAFLAALRERLLAGEGQPGRLSALAFGAGIATLPLWAVSMLLACAPSFAANESSSFRLDPNTFRLLADTAYFAWV
Ga0134084_104428532	3300010322	Grasslands Soil	MKQLWDRWAPLTGLLSVACSLIGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPMWAVSMLLANATSF
Ga0134080_104902211	3300010333	Grasslands Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLDQPQEKDSNAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLGSLRERLLAAEGQPGRLSALAFGAGIASLPLWGVSMLLANAPGLASGESSSF
Ga0134063_107795661	3300010335	Grasslands Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLDQPQEKDSNAKIVAYFAQHSNQVRGVVGFFVFFAGILFLLAFLGSLRERLLAAEGQPGRLSALAFGAGIASLPLWGVSMLLANAPGLASGESSSFKLDPNTY
Ga0134071_107559041	3300010336	Grasslands Soil	MKQLWDRWGPLTGLLSVGCSVVGTLFVLNQPQDKDSDSKIVAYFAEHSHQVRGVVGFCVFLAGIGLLLVFRAAPGERLLSAEGPPGRISALVLGAGVSSVPLWGVSMLLSNATSFASNETSKFHVDPNTFRLLGDTAYFAWVAALAVSSLVVWG
Ga0134062_103881281	3300010337	Grasslands Soil	VCSLVGVLFVLNQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLSSLRERLLAAEGESGRLSALAFGAGIASLPLWGVSMLLAFAASFTS
Ga0137364_106214692	3300012198	Vadose Zone Soil	MKQLWDRWAPLTGVLSVACSLVGVMFVLNQPQDKDSNAKIVAYFADHAHRVNSIVGFFVFLVGILLLLTFLAALRERLLAGEGQPGRLSALAFGAGIASLPLWAGSMLLANAPSFAANESSSFRLDPNTFRLLADTAYFAWVA
Ga0137380_110313931	3300012206	Vadose Zone Soil	MKPLWDRWAPLTGVLSVVCSFVGVMLVLGQPQDKDSDAKIVAYFTQHSHRVQGVVGFFVFMAGVLLLLAFLATLRERLLAAEGELGRLSALVFGAGLTSLPFWGVSILLASGTAFTAGNTSNFRVDPNSFRLFADTAYFAWVAAVVVSSIVVWGTAAVALRTGVLPRWHAR
Ga0137376_103020162	3300012208	Vadose Zone Soil	MKQLWDRWAPLTGLLSVACSLVGVMLALNQPQDKDSNAKIAAYFANHSHRVQGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGI
Ga0137376_106033831	3300012208	Vadose Zone Soil	MKQLWDRGGPLAGLLYVACSFVGVMLVLGQPQDKDSDPKIVAYFANHSHQVQGVVGFFVFLVGILFLLTFLAALRERLLAAEGQPGLCALVFGAGVASLPL
Ga0137378_112505422	3300012210	Vadose Zone Soil	MKQLWDRWAPLTGLLSVACSLVGVMLALNQPQDKDSNAKIAAYFANHSHRVLGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAGSFAAN
Ga0137371_111950221	3300012356	Vadose Zone Soil	MKQLWDRVGPLAGLLSVSCSFVGVMLVLGQPQDKDSDPKIVAYFADHSHQVQGVVGFFVFLVGILFLLTFLAALRERLLAAEGQPGLCALVFGAGVASLPL
Ga0137416_114587922	3300012927	Vadose Zone Soil	MKQLWDRWAPLTGLLSVACSLVGVMLALNQPQDKDSNAKIAAYFANHSHRVHGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAF
Ga0164303_105951031	3300012957	Soil	MKGIWERWAPLAGVLSVVCSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAADESSSFRLDPNTFR
Ga0164299_113644871	3300012958	Soil	MKQLWDRWVPLTGALAVACSLVGVMFALNQPQDKDSNAKIVAYFANHGHRVHGVIGFFVFLAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRVDPNTFRLLADTAYFAWVAAVVVSS
Ga0164302_113496601	3300012961	Soil	MQKLWDRWGPLTGPVSVACSFVGVMLVLGQPQSKDDDAKIVAYFADHAHRTQGIVGFFVFLAGLVLLLAFLSALRDRLLAAEGQPGRLSALAFGAGIASVPVWGVSMLLANAAAFASSESSTFRLDPNAFRL
Ga0164304_102557151	3300012986	Soil	MKQFLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVDYFANHSHRVHGLIGFFVFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAA
Ga0164307_104146842	3300012987	Soil	MKQFLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFGNHSHRVYGVIGFFVFLAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAG
Ga0164307_108862301	3300012987	Soil	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGLIGFFVFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRVDPNTFRMLADTAYFAW
Ga0182008_105608371	3300014497	Rhizosphere	MKLWDRWAPLTGVLAVACSLVGVMFALNQPQDKDSNAKITAYFASHSHRVHGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPLWVVSMLLANAAG
Ga0132258_128153322	3300015371	Arabidopsis Rhizosphere	MNKLWERWAPLTGVLSVACSLVGVMVVLNQPQTTDSNTAIVSYFGSHSHRVEGAVSFFVFLVGILFLLVFLASLRDRLLTAERGQGRLPALAFGAGVASLPLWGISMLLANAVSFTMGES
Ga0187775_105174911	3300017939	Tropical Peatland	MKQLWERWAPLAGVISVACSLVGVMFVLDQPQTKDSNAKITAYFADHSHRVQGAVGSFVFLAGVLFLLAFLGTLRERLLAAEGQPGRLTALAFGAGIASLPLWAISMLLANAVSFSP
Ga0066667_100695121	3300018433	Grasslands Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLGQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLSSLRERLLAAEGQSGRLSALAFGAGIASLPLWGVSMLLAFAASFTS
Ga0066669_114021821	3300018482	Grasslands Soil	MKQLWDRWAPLAGVLSVVCSLVGVLFVLDQPQEKDSNAKIVAYFAQHSNQVRGVVGFFVFFAGILFLLAFLGSLRERLLAVEGESGRLAALAFGAGIASLPLWGVSMLLAFAASFTSGESSKFR
Ga0066669_116119851	3300018482	Grasslands Soil	MRELWDRWAPLTGVLSVACTFVGVMLVLNQPQDKDSDARIVAYFADHSHRVEGVVGFFVFLAGLLLLVAFLAALRERLLAAEGGSSRSTALVFGAGVASLPLW
Ga0066669_116394711	3300018482	Grasslands Soil	MKQHWDRWAPLTGLLSVACTFVGVMFVLNQPQDTDSDAKIVAYFAEHSHRVDGIVGFFVFLAGIMLLVAFLASLRERLPAGRAASLAFGGGIASVPLWALSILLADGMALAASET
Ga0207692_110051781	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFMSSVVVWSTSAAALRTGVLPRWYGL
Ga0207699_110367112	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWERWAPLAGLVAVACSLVGVMLALDEPQDKDSDAKIVAYFADHSHRVQGVIGFFVFLTGILFLLAFLATLRDRLLDAEGQPGPLSALAFGAGIASLPLWA
Ga0207684_111236711	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWARWAPLTGLLSVACSFVGVVFALNQPQDKDSNAKIVAYFAKHSHRVEGVVGFFVFLAGILLLLAFLAALRDRLLEAEGQPGRLSALAFGAGVASVPLWGVSMLLADAASFASNETSAFRIDPNSFRLFADTAYFAWVAAVIVSALVVWGT
Ga0207663_103839211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGFLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFMSSVVVWST
Ga0207694_113931431	3300025924	Corn Rhizosphere	MKQLLERWAPLAGLVAVACSFVGVMFALDQPQDKDSNAKIAAYFADHSHRVHAVIGFFVFLAGLLFLLVFLAALRERLLVAEGRPGRLTALAFGAGVASLPLWAVSMLLANAASFAVNESPAFRLDPNTFRLLADTAYF
Ga0207687_118214821	3300025927	Miscanthus Rhizosphere	MKQLWERWAPLTGVLAVACSFVGIMVALNQPQDKDSNAKIVAYFADHTHRVDGVVGFFVFLAGLVLLLAFLEALRERLLAAEGQPGRLSTLAFGAGVASLPLWALSMLLANGASFAAN
Ga0207664_117821731	3300025929	Agricultural Soil	MKQLWDRWGPLTGVLSVVCTFVGILFALNQPQAKDSNAKIVAYFADHSHRVQAIVGFFVFLAGLLLLLMFLTALRERLLAAEGGAGRLSALAFGGGIASLPLWAVSMLLAYAVSFGANESSAF
Ga0207711_119672851	3300025941	Switchgrass Rhizosphere	MTQLWERWGPLAGVLSVVCSLFGVLVVLSQPQDGDSDAKIVAYFSNHSHRAQGIAGFFVFLAGILFLLVFLSALRERLRAAESHPGGLSALAFGAGIASLPLWALSMLLANAATFASNE
Ga0207677_113557062	3300026023	Miscanthus Rhizosphere	MKQLWERWAPLTGVLAVACSFVGIMVALNQPQDKDSNAKIVAYFADHTHRVDGVVGFFVFLAGLVLLLAFLEALRERLLAAEGQPGRLSTLAFGAGVASLPLWALSMLLANGASFAANESSSFRVDPNAFRLLADSAYF
Ga0209473_12059381	3300026330	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAKIAAYFAGHSHRVHGVVGFFVFLAGILLLLGFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAASFAANES
Ga0209804_11225071	3300026335	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAEIAAYFAGHSHRVHGIVGFFVFLAGILLLLAFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAASFAANES
Ga0209808_11212461	3300026523	Soil	MKQLWDRWGPLAGVLSVVCSLVGVLFVLDQPQEKDSNAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLGSLRERLLAVEGESGRLTALAFGAGIASLPLWGVSMLLAFAASFTSGESSKFRLDPNTY
Ga0209807_11392482	3300026530	Soil	MKQLWDRWAPLTGLLSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVVGFFVFLAGILLLLAFLAALRERLLAAEGQPGRLSALAFGAGIASLPL
Ga0209807_12883611	3300026530	Soil	MKQLWDRWGPLAGVLSVVCSLVGVLFVLGQPQEKDSDAKIVAYFAQHSHQVRGVVGFFVFFAGILFLLAFLSSLRERLLAAEGESGRLSALAFGAGIASLPLWGVSMLLAFAASFTSGESSKFRLDPNTYRLLSTTSYFA
Ga0209160_10299193	3300026532	Soil	MKQLWDRWAPLTGLLSVACSFVGVMLVLDQPQDKDSDAKIVAYFAKHSHRVQGVVGFFVFLAGILLLLAFLAALRDRLLAAEGQPGRLSALAFGSGVASVPFWGVSMLLANAAGFASNETSSFHLDANTFRLFADTAYFAWVAAVIISSVVVWTT
Ga0209805_10802021	3300026542	Soil	MKQLWDRWAPLTGLLSVACSLIGVMLVLNQPQDKDSDAKIAAYFANHSHRVHGVVGFFVFLAGILLLLAFLAGLRDRLLAAEGQPGRLSTLAFGAGIATLPLWAVSMLLANAASFAANES
Ga0209474_105928792	3300026550	Soil	MKQLWDRWAPLTGPLSVACSLVGVMLVLNQPQDKDSDAKIAAYFAGHSHRVHGVVGFFVFLAGILLLLGFLTSLRERLVAAEGQPGRLSTLAFGAGIASLPLWAVSMLLANAASFAANESSAFRLDPNTFRMLADTAYFA
Ga0209178_12389511	3300027725	Agricultural Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVVLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLAN
Ga0209073_101795882	3300027765	Agricultural Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSKRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTFRLLADTSYFAWVAALFM
Ga0209811_101659311	3300027821	Surface Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGALRERLLTAEGQPGRLAALAYGAGIASLP
Ga0307317_102196031	3300028720	Soil	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFGNHSHRVHGVIGFFVFLAGLLLLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRVDPNTFRMLADTAYFAWVAAVVVSSVVVWATSA
Ga0318535_104939061	3300031764	Soil	MKQLSISERSAPLAGVLSVVCSLVGVMHVLNQPQTKDSDAKITAYFADHSHRVQGAVSFFVYLAGIIFLLVFLGSLRERLLAAEGQPGRLTALAFGAGVAALPLWGISMLLANATSFTVSESSVFTVDPNTYRLFGVVAYITWVIALFVSSVVVWATSAVAL
Ga0318566_101322192	3300031779	Soil	MKQLSISERSAPLAGVLSVVCSLVGVMHVLNQPQTKDSDAKITAYFADHSHRVQGAVSFFVYLAGIIFLLVFLGSLRERLLAAEGQPGRLTALAFGAGVAALPLWGISMLLANATSFTVSESSVFTVDPNTYRLFG
Ga0318517_102458152	3300031835	Soil	MKQLSISERSAPLAGVLSVVCSLVGVMHVLNQPQTKDSDAKITAYFADHSHRVQGAVSFFVYLAGIIFLLVFLGSLRERLLAAEGQPGRLTALAFGAGVAALPLWGISMLLANATSFT
Ga0310904_105383111	3300031854	Soil	MKGIWERWAPLAGVLSVACSFVGVLFVLNQPESKASDAKIVAYFGDHSNRVHGEVGFFVFLAGLLFLLAFLGVLRERLLTAEGQPGRLAALAYGAGIASLPLWAVSMLLANSASFAAAESSSFRLDPNTF
Ga0307471_1006079751	3300032180	Hardwood Forest Soil	MKQLFDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGLIGFFFFIAGLLFLLAFLGALRERLLAAEGQPGRLSALAFGAGIASLPLWAVSMLLAN
Ga0307472_1027195611	3300032205	Hardwood Forest Soil	MKQLLDRWAPLTGLVSVACSLVGVMLVLNQPQDKDSNAKIVAYFANHSHRVHGVIGFFVFLAGLLFLLVFLAALRERLLVAEGQPGRLSALAFGAGIASLPLWAVSMLLANAASFAANESSAFRVDPNTFRMLADTAYFAWVAAVVVSSVVVW
Ga0335077_108108201	3300033158	Soil	MKQLERWTPLAGVLSVVCTVVGTLMVLNQPQDKDSNASIVAYFAVHSHRVKGVAGFFVFLAGILLLLVFLTELRRRLLEHEGGTGRLSTLTFGAGVAAASLWTVSMLLTNSTMFATGGPSTDFHVDPNTYRLLGDTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090915

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences