NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090888

Metagenome Family F090888

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090888
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 58 residues
Representative Sequence MKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLILAEEAKKDK
Number of Associated Samples 85
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.27 %
% of genes near scaffold ends (potentially truncated) 35.19 %
% of genes from short scaffolds (< 2000 bps) 72.22 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.778 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(26.852 % of family members)
Environment Ontology (ENVO) Unclassified
(88.889 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.333 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 37.93%    β-sheet: 10.34%    Coil/Unstructured: 51.72%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF09374PG_binding_3 2.78
PF13550Phage-tail_3 1.85
PF05866RusA 0.93
PF04233Phage_Mu_F 0.93
PF00166Cpn10 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.93
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.78 %
All OrganismsrootAll Organisms47.22 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10060040Not Available1835Open in IMG/M
3300000115|DelMOSum2011_c10005585Not Available7291Open in IMG/M
3300001450|JGI24006J15134_10040150All Organisms → Viruses → Predicted Viral1985Open in IMG/M
3300001450|JGI24006J15134_10053190All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1640Open in IMG/M
3300001450|JGI24006J15134_10079134All Organisms → cellular organisms → Bacteria → Proteobacteria1235Open in IMG/M
3300001460|JGI24003J15210_10044565Not Available1514Open in IMG/M
3300001460|JGI24003J15210_10050279All Organisms → cellular organisms → Bacteria → Proteobacteria1394Open in IMG/M
3300001460|JGI24003J15210_10061039All Organisms → Viruses → Predicted Viral1213Open in IMG/M
3300001460|JGI24003J15210_10132243All Organisms → Viruses664Open in IMG/M
3300001589|JGI24005J15628_10062878Not Available1376Open in IMG/M
3300001720|JGI24513J20088_1009535All Organisms → Viruses → Predicted Viral1218Open in IMG/M
3300004097|Ga0055584_101005911All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300006029|Ga0075466_1000123All Organisms → cellular organisms → Bacteria26178Open in IMG/M
3300006164|Ga0075441_10035031Not Available2030Open in IMG/M
3300006190|Ga0075446_10028899Not Available1806Open in IMG/M
3300006191|Ga0075447_10090751Not Available1068Open in IMG/M
3300006191|Ga0075447_10095704All Organisms → Viruses1034Open in IMG/M
3300006735|Ga0098038_1001902Not Available8982Open in IMG/M
3300006735|Ga0098038_1050307All Organisms → Viruses → environmental samples → uncultured virus1506Open in IMG/M
3300006789|Ga0098054_1327565All Organisms → cellular organisms → Bacteria → Proteobacteria545Open in IMG/M
3300006810|Ga0070754_10495946Not Available526Open in IMG/M
3300006924|Ga0098051_1070333All Organisms → cellular organisms → Bacteria → Proteobacteria952Open in IMG/M
3300006928|Ga0098041_1006078All Organisms → Viruses → Predicted Viral4133Open in IMG/M
3300006947|Ga0075444_10383093All Organisms → Viruses → environmental samples → uncultured virus531Open in IMG/M
3300007229|Ga0075468_10020722All Organisms → Viruses → Predicted Viral2427Open in IMG/M
3300007276|Ga0070747_1057291All Organisms → Viruses → environmental samples → uncultured virus1483Open in IMG/M
3300007276|Ga0070747_1090291Not Available1136Open in IMG/M
3300008218|Ga0114904_1046280Not Available1151Open in IMG/M
3300008219|Ga0114905_1009188All Organisms → Viruses → Predicted Viral4223Open in IMG/M
3300008221|Ga0114916_1026901All Organisms → Viruses → Predicted Viral1842Open in IMG/M
3300008221|Ga0114916_1033801Not Available1560Open in IMG/M
3300009077|Ga0115552_1384882Not Available554Open in IMG/M
3300009172|Ga0114995_10582290All Organisms → Viruses611Open in IMG/M
3300009193|Ga0115551_1023865All Organisms → Viruses → Predicted Viral3176Open in IMG/M
3300009412|Ga0114903_1129419All Organisms → Viruses → environmental samples → uncultured virus553Open in IMG/M
3300009423|Ga0115548_1022870Not Available2501Open in IMG/M
3300009425|Ga0114997_10278640Not Available932Open in IMG/M
3300009433|Ga0115545_1097983Not Available1064Open in IMG/M
3300009435|Ga0115546_1093694Not Available1097Open in IMG/M
3300009505|Ga0115564_10625339All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.506Open in IMG/M
3300009508|Ga0115567_10248033All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300009603|Ga0114911_1156823Not Available636Open in IMG/M
3300009705|Ga0115000_10671027All Organisms → Viruses641Open in IMG/M
3300011252|Ga0151674_1043925Not Available768Open in IMG/M
3300017714|Ga0181412_1149802All Organisms → cellular organisms → Bacteria → Proteobacteria526Open in IMG/M
3300017725|Ga0181398_1042941Not Available1101Open in IMG/M
3300017727|Ga0181401_1050806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1135Open in IMG/M
3300017730|Ga0181417_1003151All Organisms → cellular organisms → Bacteria4642Open in IMG/M
3300017738|Ga0181428_1053050Not Available944Open in IMG/M
3300017746|Ga0181389_1021333All Organisms → Viruses → Predicted Viral2028Open in IMG/M
3300017749|Ga0181392_1242152Not Available509Open in IMG/M
3300017752|Ga0181400_1102145All Organisms → cellular organisms → Bacteria → Proteobacteria841Open in IMG/M
3300017752|Ga0181400_1117611Not Available770Open in IMG/M
3300017758|Ga0181409_1243040Not Available512Open in IMG/M
3300017759|Ga0181414_1063415All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6984Open in IMG/M
3300017773|Ga0181386_1110902All Organisms → Viruses852Open in IMG/M
3300020165|Ga0206125_10010222All Organisms → cellular organisms → Bacteria → Proteobacteria6718Open in IMG/M
3300020595|Ga0206126_10136180All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1180Open in IMG/M
3300021365|Ga0206123_10170409Not Available985Open in IMG/M
3300021371|Ga0213863_10000371Not Available34426Open in IMG/M
3300021960|Ga0222715_10065432All Organisms → Viruses → Predicted Viral2450Open in IMG/M
3300022053|Ga0212030_1026569Not Available795Open in IMG/M
3300022074|Ga0224906_1002722All Organisms → cellular organisms → Bacteria → Proteobacteria8034Open in IMG/M
3300022074|Ga0224906_1173918All Organisms → Viruses → environmental samples → uncultured virus598Open in IMG/M
(restricted) 3300024518|Ga0255048_10052325Not Available2046Open in IMG/M
3300025048|Ga0207905_1012923Not Available1436Open in IMG/M
3300025085|Ga0208792_1066155All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300025108|Ga0208793_1010769All Organisms → Viruses → Predicted Viral3601Open in IMG/M
3300025110|Ga0208158_1021294All Organisms → Viruses1700Open in IMG/M
3300025120|Ga0209535_1013996Not Available4330Open in IMG/M
3300025120|Ga0209535_1057967Not Available1602Open in IMG/M
3300025137|Ga0209336_10051543Not Available1276Open in IMG/M
3300025137|Ga0209336_10062373All Organisms → cellular organisms → Bacteria → Proteobacteria1124Open in IMG/M
3300025237|Ga0208031_1003881Not Available2082Open in IMG/M
3300025237|Ga0208031_1007736All Organisms → Viruses → environmental samples → uncultured virus1481Open in IMG/M
3300025266|Ga0208032_1013168Not Available2580Open in IMG/M
3300025276|Ga0208814_1082599Not Available848Open in IMG/M
3300025276|Ga0208814_1090102Not Available794Open in IMG/M
3300025806|Ga0208545_1001159Not Available11877Open in IMG/M
3300025809|Ga0209199_1173953Not Available776Open in IMG/M
3300025816|Ga0209193_1056980Not Available1065Open in IMG/M
3300025897|Ga0209425_10085016All Organisms → Viruses → Predicted Viral1931Open in IMG/M
3300025897|Ga0209425_10274114All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300027686|Ga0209071_1069474Not Available1049Open in IMG/M
3300028125|Ga0256368_1040099All Organisms → Viruses833Open in IMG/M
3300028125|Ga0256368_1052426All Organisms → Viruses → environmental samples → uncultured virus716Open in IMG/M
3300029787|Ga0183757_1000283Not Available29909Open in IMG/M
3300031519|Ga0307488_10317451All Organisms → Viruses996Open in IMG/M
3300031569|Ga0307489_10262057Not Available1101Open in IMG/M
3300031569|Ga0307489_11363823Not Available515Open in IMG/M
3300031588|Ga0302137_1200985Not Available691Open in IMG/M
3300031599|Ga0308007_10190501All Organisms → Viruses → environmental samples → uncultured virus717Open in IMG/M
3300031602|Ga0307993_1010743Not Available2366Open in IMG/M
3300031608|Ga0307999_1039743Not Available1128Open in IMG/M
3300031626|Ga0302121_10249201All Organisms → Viruses502Open in IMG/M
3300031629|Ga0307985_10148960Not Available930Open in IMG/M
3300031659|Ga0307986_10119629All Organisms → Viruses1256Open in IMG/M
3300031675|Ga0302122_10336418Not Available522Open in IMG/M
3300031687|Ga0308008_1015260All Organisms → Viruses → Predicted Viral1976Open in IMG/M
3300033742|Ga0314858_039079Not Available1122Open in IMG/M
3300033742|Ga0314858_156711Not Available585Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine26.85%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine12.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.96%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean10.19%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous6.48%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.48%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.56%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine3.70%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine3.70%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.78%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.78%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.85%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.93%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001720Marine viral communities from the Pacific Ocean - LP-36EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025237Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031602Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260EnvironmentalOpen in IMG/M
3300031608Marine microbial communities from water near the shore, Antarctic Ocean - #1EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1006004023300000101MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
DelMOSum2011_10005585133300000115MarineMKVVNWIAKRLTEPSSYAAIGVGVIGVGMIMGMGELMFIGVACAILGLILAEEAKNCDCDK*
JGI24006J15134_1004015033300001450MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK*
JGI24006J15134_1005319033300001450MarineRLFLINLKRNSKMIKWITGRLSEPSSYAAIGVGVIAIGTISGIGELVFVGLGCAILGLILSEEAKK*
JGI24006J15134_1007913433300001450MarineLFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK*
JGI24003J15210_1004456513300001460MarineESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
JGI24003J15210_1005027933300001460MarineVALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK*
JGI24003J15210_1006103943300001460MarineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKD
JGI24003J15210_1013224323300001460MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELIFIGIGCGILGLLMREEGKDK*
JGI24005J15628_1006287813300001589MarineFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
JGI24513J20088_100953513300001720MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGL
Ga0055584_10100591123300004097Pelagic MarineALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK*
Ga0075466_100012393300006029AqueousMNWLMNRLKEPSSYAAIGVGIIGIGIIIGVMELAFIGVAASILGLIIAEEKK*
Ga0075441_1003503123300006164MarineMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
Ga0075446_1002889923300006190MarineMKIITWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAKKDK*
Ga0075447_1009075123300006191MarineMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAKKDK*
Ga0075447_1009570433300006191MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGIGELVFIGIGCGILGLVMREEGKDK*
Ga0098038_100190253300006735MarineMKIVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCDCDK*
Ga0098038_105030743300006735MarineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLIMREEGKDK*
Ga0098054_132756513300006789MarineMKIVNWVTKRLTEPSSYAAIGVGVIGLGMITGVGELMFLGVACAVLGLILAEQSKSDK*
Ga0070754_1049594613300006810AqueousLFLINLKRNSKMIKWITGRLSEPSSYAAIGVGVIAVGTISGIGELVFVGLGCAILGLILSEEAKK*
Ga0098051_107033323300006924MarineMKIVNWIAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCDCDK*
Ga0098041_100607843300006928MarineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSSVGELVFIGIGCGILGLIMREEGKDK*
Ga0075444_1038309323300006947MarineMFGWIKERLSEPSSYAAIGVGIIGIGIVSGVGELIFIGIGCGILGLLMREEGKDK*
Ga0075468_1002072223300007229AqueousMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK*
Ga0070747_105729123300007276AqueousMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK*
Ga0070747_109029123300007276AqueousMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLIIAEEAKKDK*
Ga0114904_104628013300008218Deep OceanMKVVNWIAKRLTEPSSYAAIGVGVIGVGMIMGMGELMFIGVACAILGLILAE
Ga0114905_100918873300008219Deep OceanMFGWIKGRLSEPSSYAAIGVGIVGIGVISGIGELIFVGVGCSILGLVMREEGKDK*
Ga0114916_102690123300008221Deep OceanMFGWIKERLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK*
Ga0114916_103380113300008221Deep OceanLFKKESEMKIITWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLG
Ga0115566_1005959313300009071Pelagic MarineNREGGCLVALFSFKKESKMKIVNWITGRLSEPSSYAEIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK*
Ga0115552_138488213300009077Pelagic MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFIGVACAVLGLILAEEAKKDK*
Ga0114995_1058229023300009172MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVSELIFIGIGCGILGLLMREEGKDK*
Ga0115551_102386523300009193Pelagic MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK*
Ga0114903_112941913300009412Deep OceanMFGWIKGRLSEPSSYAAIGVGIVGIGVISGIGELIFVGVGCSILGLVMRE
Ga0115548_102183463300009423Pelagic MarineGGCLVALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK*
Ga0115548_102287033300009423Pelagic MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKK*
Ga0114997_1027864013300009425MarineLFKKEIKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
Ga0115545_109798313300009433Pelagic MarineNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK*
Ga0115546_109369433300009435Pelagic MarineFLFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLILAEEAKKDK*
Ga0115564_1062533923300009505Pelagic MarineVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAVLGLILAEEAKKDK*
Ga0115567_1024803313300009508Pelagic MarineKMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK*
Ga0114911_115682323300009603Deep OceanMKVVNWIAKRLTEPSSYAAIGVGVIGVGMIMGMGELMFIGVACAILGLILAEEAKNCD
Ga0115000_1067102723300009705MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVSELIFIGIGCGILGLLMREEGKEK*
Ga0115000_1077071213300009705MarineGYLVALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK*
Ga0151674_104392523300011252MarineMKIVNWITKRLTEPSSYAAIGVGVIGIGMITGMGELLFIGVACAVLGLILAEEAKK*
Ga0181412_114980223300017714SeawaterVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCNCDK
Ga0181398_104294123300017725SeawaterMNWLMNRLKEPSSYAAIGVGIIGIGIISGVMELAFIGVAASILGLIIAEEKK
Ga0181401_105080623300017727SeawaterMKIVNWIAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCNCD
Ga0181417_100315163300017730SeawaterMNWLMNRLKEPSSYAAIGVGIIGIGIISGVMELAFIGDAASILGLIIAEEKK
Ga0181428_105305013300017738SeawaterMKIVNWIAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLIL
Ga0181389_102133313300017746SeawaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGL
Ga0181392_124215223300017749SeawaterFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0181400_110214523300017752SeawaterIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0181400_111761113300017752SeawaterNWLMNRLKEPSSYAAIGVGIIGIGIISGVMELAFIGVAASILGLIIAEEKK
Ga0181409_124304013300017758SeawaterMKIVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCNCD
Ga0181414_106341533300017759SeawaterMNWLMNRLKEPSSYAAIGVGIIGIGIISGVMELAFIGVAASILGLIIA
Ga0181386_111090223300017773SeawaterMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLIMREEGKDK
Ga0206125_10010222143300020165SeawaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFIGVACAVLGLILAEEAKKDK
Ga0206126_1013618023300020595SeawaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0206123_1017040923300021365SeawaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK
Ga0213863_10000371473300021371SeawaterMNWLMNRLKEPSSYAAIGVGIIGIGIIIGVMELAFIGVAASILGLIIAEEKK
Ga0222715_1006543253300021960Estuarine WaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAE
Ga0212030_102656923300022053AqueousMKVVNWIAKRLTEPSSYAAIGVGVIGVGMIMGMGELMFIGVACAILGLILAEEAKNCDCD
Ga0224906_1002722133300022074SeawaterMKIVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCDCD
Ga0224906_117391813300022074SeawaterMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLIMREEGKDK
(restricted) Ga0255048_1005232543300024518SeawaterMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKK
Ga0207905_101292333300025048MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK
Ga0208792_106615523300025085MarineYERRLTMKIVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCDCDK
Ga0208793_101076913300025108MarineMKIVNWVAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCD
Ga0208158_102129443300025110MarineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSSVGELVFIGIGCGILGLIMREEGKDK
Ga0209535_101399693300025120MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLILAEEAKKDK
Ga0209535_105796723300025120MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELIFIGIGCGILGLLMREEGKDK
Ga0209336_1005154333300025137MarineALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK
Ga0209336_1006237313300025137MarineALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0208031_100388123300025237Deep OceanMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAKKDK
Ga0208031_100773643300025237Deep OceanMFGWIKERLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK
Ga0208032_101316843300025266Deep OceanMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGIGELVFIGIGCGILGLVMREEGKDK
Ga0208814_108259913300025276Deep OceanTGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0208814_109010223300025276Deep OceanMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK
Ga0209194_105547033300025632Pelagic MarineGGCLVALFLFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLILAEEAKKDK
Ga0208545_1001159143300025806AqueousMNRLKEPSSYAAIGVGIIGIGIIIGVMELAFIGVAASILGLIIAEEKK
Ga0209199_117395323300025809Pelagic MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAVLGQHMQHR
Ga0209193_105475613300025816Pelagic MarineREGGCLVALFLFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLILAEEAKKDK
Ga0209193_105698013300025816Pelagic MarineNWITGRLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKKDK
Ga0209832_114362623300025830Pelagic MarineRNREGGCLVALFSFKKESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK
Ga0209425_1008501623300025897Pelagic MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAVLGLILAEEAKKDK
Ga0209425_1027411413300025897Pelagic MarineESKMKIVNWITGRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNS
Ga0209071_106947423300027686MarineMKIITWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAKKDK
Ga0256368_104009923300028125Sea-Ice BrineMFEWIKGRLSEPSSYAAIGVGIVGIGIVSGVGELIFIGIGCGILGLLMREEGKDK
Ga0256368_105242623300028125Sea-Ice BrineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK
Ga0183757_1000283243300029787MarineMKIVNWIAKRLTEPSSYAAIGVGVIGVGMITGMGELMFIGVASAILGLILAEEAKNCDCD
Ga0307488_10020261123300031519Sackhole BrineNREGGYLVALFSFKKESKMKIVNWVMKRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK
Ga0307488_1031745113300031519Sackhole BrineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVGELVFIGIGCGILGLVMREEGKDK
Ga0307489_1026205713300031569Sackhole BrineMKIVNWVMKRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNSK
Ga0307489_1136382313300031569Sackhole BrineWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK
Ga0302137_120098513300031588MarineMSIVNWVTKRLSEPSSYAAIGVGVIGIGMISGVGELLFVGVACAILGLILAEESKNNK
Ga0308007_1019050123300031599MarineMFGWIKERLSEPSSYAAIGVGIIGIGIVSGIGELVFIGIGCGILGLVMREEGKDK
Ga0307993_101074323300031602MarineMSIVNWIMKRLSEPSSYAAIGVGVIGIGMISGVGELLFLGVACAILGLIIAEESKK
Ga0307999_103974323300031608MarineMKIITWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEEAKKDK
Ga0302121_1024920123300031626MarineMFEWIKGRLSEPSSYAAIGVGIIGIGIVSGVSELIFIGIGCGILGLLMREEGKDK
Ga0307985_1014896023300031629MarineSFKKESKMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAKKDK
Ga0307986_1011962933300031659MarineMFGWIKGRLSEPSSYAAIGVGIIGIGIVSGIGELVFIGIGCGILGLVMREEGKDK
Ga0302122_1033641813300031675MarineMKIVNWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAVLGLIIAEE
Ga0308008_101526013300031687MarineMKIINWITGRLSEPSSYAAIGVGVIGIGIISGVGELLFIGVACAILGLIIAEEAK
Ga0314858_039079_2_1423300033742Sea-Ice BrineLSEPSSYAAIGVGVIGIGMIAGVGELLFIGVACAVLGLILAEEAKK
Ga0314858_156711_254_4303300033742Sea-Ice BrineMRIVNWIAGRLSEPSSYAAIGVGVIGIGMITGVLELSFIGVACAILGLILAEEAKKDK


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