Metagenome Family F090840

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090840
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	83 residues
Representative Sequence	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLSAGG
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.70 %
% of genes near scaffold ends (potentially truncated)	27.78 %
% of genes from short scaffolds (< 2000 bps)	95.37 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (28.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.45% β-sheet: 0.00% Coil/Unstructured: 44.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.92.1.2: Thermolysin-like	d4n4ee_	4n4e	0.55158
c.47.1.0: automated matches	d4jrra1	4jrr	0.53525
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d3rkod_	3rko	0.53004
c.47.1.13: DsbA-like	d3rppa_	3rpp	0.52856
d.92.1.2: Thermolysin-like	d1u4ga_	1u4g	0.52847

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01039	Carboxyl_trans	54.63
PF08327	AHSA1	0.93
PF00149	Metallophos	0.93
PF00353	HemolysinCabind	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	54.63
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	54.63
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	54.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
cellular organisms	root	All Organisms → cellular organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	23.15 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20.37 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	2.78 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	2.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.63 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	2.78 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.93 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4.63 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.78 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.93 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4.63 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.78 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.93 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118435459	Not Available	559	Open in IMG/M
3300003987\|Ga0055471_10160586	Not Available	689	Open in IMG/M
3300004479\|Ga0062595_101177396	Not Available	678	Open in IMG/M
3300004643\|Ga0062591_102676280	Not Available	527	Open in IMG/M
3300005328\|Ga0070676_11318832	Not Available	552	Open in IMG/M
3300005329\|Ga0070683_101179323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300005339\|Ga0070660_101588167	Not Available	557	Open in IMG/M
3300005341\|Ga0070691_10516626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	693	Open in IMG/M
3300005366\|Ga0070659_100275243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300005456\|Ga0070678_101754386	Not Available	585	Open in IMG/M
3300005535\|Ga0070684_101182577	Not Available	719	Open in IMG/M
3300005578\|Ga0068854_101890019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300005840\|Ga0068870_10530400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	789	Open in IMG/M
3300006169\|Ga0082029_1440908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300006844\|Ga0075428_101069905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300006844\|Ga0075428_102476142	Not Available	532	Open in IMG/M
3300006881\|Ga0068865_100669004	Not Available	884	Open in IMG/M
3300006918\|Ga0079216_11155390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300006969\|Ga0075419_10936732	Not Available	627	Open in IMG/M
3300009094\|Ga0111539_13500587	Not Available	504	Open in IMG/M
3300009098\|Ga0105245_11177370	Not Available	814	Open in IMG/M
3300009100\|Ga0075418_12869311	Not Available	526	Open in IMG/M
3300009147\|Ga0114129_13065661	Not Available	547	Open in IMG/M
3300009148\|Ga0105243_10874644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	892	Open in IMG/M
3300009156\|Ga0111538_11534276	Not Available	840	Open in IMG/M
3300009789\|Ga0126307_10242832	Not Available	1448	Open in IMG/M
3300009789\|Ga0126307_10419526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1079	Open in IMG/M
3300009789\|Ga0126307_11035113	Not Available	664	Open in IMG/M
3300009840\|Ga0126313_10042656	All Organisms → cellular organisms → Bacteria	3166	Open in IMG/M
3300009840\|Ga0126313_10126167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1910	Open in IMG/M
3300009840\|Ga0126313_11312911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300010036\|Ga0126305_10208574	Not Available	1242	Open in IMG/M
3300010037\|Ga0126304_10217406	Not Available	1252	Open in IMG/M
3300010037\|Ga0126304_10592187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300010039\|Ga0126309_10062770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1814	Open in IMG/M
3300010039\|Ga0126309_10598623	Not Available	693	Open in IMG/M
3300010039\|Ga0126309_10922734	Not Available	580	Open in IMG/M
3300010039\|Ga0126309_11320579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	500	Open in IMG/M
3300010040\|Ga0126308_10017747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3774	Open in IMG/M
3300010040\|Ga0126308_10062446	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300010040\|Ga0126308_10436087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300010040\|Ga0126308_11071809	Not Available	567	Open in IMG/M
3300010041\|Ga0126312_10005931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	8230	Open in IMG/M
3300010041\|Ga0126312_10407518	Not Available	967	Open in IMG/M
3300010042\|Ga0126314_10473765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300010042\|Ga0126314_10721021	Not Available	731	Open in IMG/M
3300010042\|Ga0126314_10795560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300010166\|Ga0126306_11381893	Not Available	582	Open in IMG/M
3300010166\|Ga0126306_11454915	Not Available	568	Open in IMG/M
3300010403\|Ga0134123_13261380	Not Available	523	Open in IMG/M
3300010403\|Ga0134123_13629915	Not Available	501	Open in IMG/M
3300012093\|Ga0136632_10254226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	795	Open in IMG/M
3300012897\|Ga0157285_10329427	Not Available	529	Open in IMG/M
3300012987\|Ga0164307_11684024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	537	Open in IMG/M
3300012989\|Ga0164305_10816583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	775	Open in IMG/M
3300014745\|Ga0157377_10255914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1137	Open in IMG/M
3300015077\|Ga0173483_10970386	Not Available	507	Open in IMG/M
3300018429\|Ga0190272_10158078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1573	Open in IMG/M
3300018429\|Ga0190272_12916430	Not Available	529	Open in IMG/M
3300018432\|Ga0190275_10877229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	964	Open in IMG/M
3300018432\|Ga0190275_11134339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	856	Open in IMG/M
3300018432\|Ga0190275_11440116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300018466\|Ga0190268_11421634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	596	Open in IMG/M
3300018469\|Ga0190270_10890087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	907	Open in IMG/M
3300018469\|Ga0190270_11022433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	854	Open in IMG/M
3300018469\|Ga0190270_11820681	Not Available	664	Open in IMG/M
3300018476\|Ga0190274_12910710	Not Available	574	Open in IMG/M
3300022756\|Ga0222622_10821072	Not Available	680	Open in IMG/M
3300025901\|Ga0207688_10689474	Not Available	646	Open in IMG/M
3300025907\|Ga0207645_10144914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1548	Open in IMG/M
3300025908\|Ga0207643_10445916	Not Available	823	Open in IMG/M
3300025917\|Ga0207660_10917598	Not Available	715	Open in IMG/M
3300025918\|Ga0207662_11359450	Not Available	504	Open in IMG/M
3300025923\|Ga0207681_10377893	Not Available	1140	Open in IMG/M
3300025927\|Ga0207687_10879199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	766	Open in IMG/M
3300025927\|Ga0207687_11566251	Not Available	566	Open in IMG/M
3300025932\|Ga0207690_10489921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300025933\|Ga0207706_10533247	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300025935\|Ga0207709_10513795	Not Available	937	Open in IMG/M
3300025937\|Ga0207669_11871298	Not Available	513	Open in IMG/M
3300025938\|Ga0207704_10233181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1370	Open in IMG/M
3300025940\|Ga0207691_10459028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1084	Open in IMG/M
3300025972\|Ga0207668_11022849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300025981\|Ga0207640_10727412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300026067\|Ga0207678_11129269	Not Available	694	Open in IMG/M
3300026121\|Ga0207683_10836534	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300028578\|Ga0272482_10281912	Not Available	532	Open in IMG/M
3300028589\|Ga0247818_10812065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	653	Open in IMG/M
3300028721\|Ga0307315_10254180	Not Available	552	Open in IMG/M
3300028784\|Ga0307282_10178109	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300028812\|Ga0247825_11036370	Not Available	597	Open in IMG/M
3300028880\|Ga0307300_10083782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	945	Open in IMG/M
3300028881\|Ga0307277_10454445	Not Available	574	Open in IMG/M
3300030336\|Ga0247826_10376158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1042	Open in IMG/M
3300030336\|Ga0247826_11785697	Not Available	503	Open in IMG/M
3300030336\|Ga0247826_11790781	Not Available	503	Open in IMG/M
3300031229\|Ga0299913_10090901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2971	Open in IMG/M
3300031731\|Ga0307405_10926239	Not Available	739	Open in IMG/M
3300031858\|Ga0310892_10808072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	651	Open in IMG/M
3300031903\|Ga0307407_10460396	Not Available	925	Open in IMG/M
3300031911\|Ga0307412_11353493	Not Available	643	Open in IMG/M
3300031938\|Ga0308175_101079338	Not Available	890	Open in IMG/M
3300031995\|Ga0307409_100473853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300031995\|Ga0307409_101841565	Not Available	634	Open in IMG/M
3300032012\|Ga0310902_10678705	Not Available	692	Open in IMG/M
3300032013\|Ga0310906_11480057	Not Available	500	Open in IMG/M
3300032075\|Ga0310890_10895815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	708	Open in IMG/M
3300033551\|Ga0247830_10481999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.81%
Host-Associated	Host-Associated	35.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.04%
Plants	Host-Associated → Plants	35.19%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.48%
Loam	Environmental → Terrestrial → Soil → Loam	5.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.85%
Ice	Environmental → Aquatic → Freshwater → Ice	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1184354592	3300002568	Soil	VPNANERRILTAPGPVARAAAKVAPLPEQRWILCQPREVRQSFADEVFGRPDEELQQQIWMLRQRKDVRESYISQVLLAADG*
Ga0055471_101605862	3300003987	Natural And Restored Wetlands	VSSNTERRFLTAPGPVAKAAARVAALPEQRWILGQAREVRQSYAEHVLGRHDEALQQQIWMLRQKQEVRESYIADVLLAREG*
Ga0062595_1011773961	3300004479	Soil	VSNATERRILTAPTPVARAAAKVAALPEQRWILLQPREVRQSFAEEVLGQPDIELRQQIWMLRQARAVRESYIADVLLAADG*
Ga0062591_1026762802	3300004643	Soil	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQAK
Ga0070676_113188321	3300005328	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLSAGG*
Ga0070683_1011793231	3300005329	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRLSYAEEVLGRPDEALHQQIWMLRQSKAVRESYIAGVLLSAAG*
Ga0070660_1015881671	3300005339	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAGG*
Ga0070691_105166262	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLLSAGG*
Ga0070659_1002752432	3300005366	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLGAAG*
Ga0070678_1017543861	3300005456	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG*
Ga0070684_1011825772	3300005535	Corn Rhizosphere	VPNANERRILTAPGPVARAAAKVAPLPEQRWILMQPREVRQSFAEEVFGQPDEEVRQQIWMLRQEREVRESYIAQVLRPADG*
Ga0068854_1018900192	3300005578	Corn Rhizosphere	RSAGPEPLPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLLSAGG*
Ga0068870_105304002	3300005840	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAAG*
Ga0082029_14409082	3300006169	Termite Nest	VSSTTERRVLTAPGPVARAAARVAALPEQRWILCQPREVRQSYADEVLGHPDEARQQQIWMLRQKKEVRESYIADVLLAAEG*
Ga0075428_1010699052	3300006844	Populus Rhizosphere	VSSNAERRVLTAPGPVARAAARVAALPEQRWILTQPRQVRQSYADHVLGRPDEALQQQIWMLRQKQAVRESYISDVLLGGEG*
Ga0075428_1024761422	3300006844	Populus Rhizosphere	VSNANERRILTAPAPVARAAARVASLPEQRWILAQPRDVRRSYAEEVLGHADEPLRQQIWMLRQTKAVRESYIADVLEAPRG*
Ga0068865_1006690043	3300006881	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVLGRPDEALHQQIWMLRQSKAVR
Ga0079216_111553901	3300006918	Agricultural Soil	MSSTEQRVLTAPGPVARAAARMATEPEQRWLLCQPREVRRSFAEQVFGQPDEARRQQIWMLRQAKAVRESY
Ga0075419_109367322	3300006969	Populus Rhizosphere	VPNANERRILPAPAPVARAAARVAALPEQRWILTQPRDVRRSYAEDVLGHPDEQLRQQVWMLRQAKAVRESYIADVLEAPRG*
Ga0111539_135005872	3300009094	Populus Rhizosphere	MSASPTERRVLTAPGPVARAAARVASLPEQRWILGQPRDVRQSYADNVLGRPDEPLRQQIWMLRQTEAVRESYIAQVLPAPEG*
Ga0105245_111773702	3300009098	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAEVLLG*
Ga0075418_128693111	3300009100	Populus Rhizosphere	VSNANERRILTAPAPVARAAARVAALPEQRWILTQPRDVRRSYAEDVLGHPDEQLRQQVWMLRQAKAVRESYIADVLEAPRG*
Ga0114129_130656612	3300009147	Populus Rhizosphere	LAAVDSSGVSNANERRILTAPAPVARAAARVAALPEQRWILTQPRDVRRSYAEDVLGHPDEELRQQVWMLRQTKAVRESYIADVLEAPRG*
Ga0105243_108746442	3300009148	Miscanthus Rhizosphere	VLTAPGPVAKAAARVAALPEQRWILCQPREVRQSYAEKVLGRPDEALQQQIWMLRQAKEVRESYIAEVLLATEG*
Ga0111538_115342762	3300009156	Populus Rhizosphere	MSASPTERRVLTAPGPVARAAARVASLPEQRWILGQPRDVRQSYADNVLGRPDEPLRQQIWMLRQTEAVSESYIAQVLPAPEG*
Ga0126307_102428322	3300009789	Serpentine Soil	VSNANERRILTAPAPVARAAAKVAAQPEQRWILTQPRHVRRSYAEAVLGHPDEELRQQIWMLRQAKPVRESYIADVLEAPRG*
Ga0126307_104195262	3300009789	Serpentine Soil	VSSPTERRVLTAPSPVAKAAARVATLPEQRWILCQPRDVRQSYADDVLGRPDEALQQQIWMLRQEKDVRESYIAEVLLAPEG*
Ga0126307_110351132	3300009789	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQTREVRQSYAEKVLGRPDEELQQQIWMLRQSKAVRESYIAEVLLPGDGR*
Ga0126313_100426562	3300009840	Serpentine Soil	VSSTERRVLTSPGPLARAAARWAGLPEQRWLLQQPREIRQSYADEVHGRPDEELHAQIWMLRQPKAVRESYIAEVLLAPEG*
Ga0126313_101261672	3300009840	Serpentine Soil	VSSFTERRVLTAPGPVAKAAARVATLPAQRWILGQPRDVRQSYADHVLGRADEALQQQIWMLRQKQEVRESYIAEVLLAAEG*
Ga0126313_113129112	3300009840	Serpentine Soil	VSSTTERRVLTAPDPVARAAARLAGQREQRWMLCQPRAVRQSFAEEVFGRPDAELRQQIWMLRQSDAVRESYIAAVLLGAG*
Ga0126305_102085741	3300010036	Serpentine Soil	APVARAAAKVAAQPEQRWILTQPRHVRRSYAEAVLGHPDEELRQQIWMLRQSKAVRESYIEDVLLAEGG*
Ga0126304_102174062	3300010037	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQTREVRQSYAESVLGRPEEELQQQIWMLRQSKAVRESYIEDVLLAEGG*
Ga0126304_105921872	3300010037	Serpentine Soil	QRSPPCSTRWVRRITDRSAVPDVLPQSGGVSSPTERRVLTAPGPVAKAAARVAAQPEQRWILCQPREVRRSYADHVLGRPDEALQQQIWMLRQKQEVRESYIADVLLAPEG*
Ga0126309_100627702	3300010039	Serpentine Soil	VSSTTERLALTAPGPVAKAAARVATLSEQRWILCQPRDVRQSYADHVLGRPDEALQQQIWMLRQKQEVRESYIAEVLLAAEG*
Ga0126309_105986232	3300010039	Serpentine Soil	MASREERILTAPGPVARAAANLAPEPEQRWLLCQPRDVRRSYAEQVLGRPDEELQRQVWMLRQNSAVRESYIREVLLADDRPG*
Ga0126309_109227342	3300010039	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQPREVRQSYAEHVLGRPDEDLQQQIWMLRQSKAVRESYITEVLLAEGG*
Ga0126309_113205791	3300010039	Serpentine Soil	VLHITARSAVPDALSHFPGVSSNTERRVLTSPGPVARAAARMAALPEQRWILLQPREVRQSYAEQVLGRHDEDLQRQIWMLRQPKAVRESYIAD
Ga0126308_100177475	3300010040	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQTREVRQSYAEKVLGRPDEELQQQIWMLRQSKAVRESYIDDVLLAEGG*
Ga0126308_100624462	3300010040	Serpentine Soil	VSSTERAVLTAPGPVARAAARVAALPEQRWLLQQPREVRRSYADEVLGRSDEELQQQIWMLRQSRQVRETYIAQVLLADQPA*
Ga0126308_104360872	3300010040	Serpentine Soil	VSNANERRILTAPAPVARAAAKVAAQPEQRWILTQPRDVRRSYAEDVLGHPDEELRQQIWMLRQAKPVRESYIADVLEAPRG*
Ga0126308_110718092	3300010040	Serpentine Soil	DTLPQSSRVSSTERRVLTSPGPLARAAARWAGLPEQRWLLQQPREIRQSYADEVHGRPDEELHAQIWMLRQPKAVRESYIAEVLLAPEG*
Ga0126312_100059315	3300010041	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVATLPAQRWILGQPRDVRQSYADHVLGRADEALQQQIWMLRQKQEVRESYIAEVLLAAEG*
Ga0126312_104075183	3300010041	Serpentine Soil	VSSTERRVLTSPGPLARAAARWAGLPEQRWLLQQPREIRQSYADEVHGRPDEELHAQIWMLRQPKAV
Ga0126314_104737652	3300010042	Serpentine Soil	VSSGERAVLTAPGPVARAAARVAALPEQRWLLQQPREVRRSYAEEVLGRSDEELQQQIWMLRQSRQVRETYIAQVLLADQPA*
Ga0126314_107210212	3300010042	Serpentine Soil	VSSTTERRVLTAPDAVARAAARLAGDREQQWMLCQPRAVRQSFAEEVFGRPDEEKRQEIWMLRQSKAVRESYIEQVLLAEDG*
Ga0126314_107955602	3300010042	Serpentine Soil	RHITARSAGPDRLPHFLGVSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQTREVRQSYAEKVLGRPDEELQQQIWMLRQSKAVRESYIDDVLLAEGG*
Ga0126306_113818932	3300010166	Serpentine Soil	VSSSTERRVLTAPGPVAKAAARVAALPEQRWILQQTREVRQSYAENVLGRPDEQLQQQIWMLRQSKAVRESYIEDVLLAEGG*
Ga0126306_114549151	3300010166	Serpentine Soil	ERRILTAPAPVARAAAKVAAQPEQRWILTQPRHVRRSYAEAVLGHPDEELRQQIWMLRQAKPVRESYIADVLEAPRG*
Ga0134123_132613801	3300010403	Terrestrial Soil	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLL
Ga0134123_136299152	3300010403	Terrestrial Soil	VSNANERRILTAPAPVARAAARVASLPEQRWILAQPRDIRRSYADDVLGHPDEKLRQQIWMLRQNKAVRESYITEVLEA
Ga0136632_102542261	3300012093	Polar Desert Sand	VSSTEYRVLTAPAAVAKAAARMVPEPEQRWLLGQPRDVRRSYAEAVLGRPDEQLLRQVWMLRQAKAVRESYIREVLLAEPEQPA*
Ga0157285_103294271	3300012897	Soil	PQSVGVSSTAERRVLTSPGPVARAAARVATLAEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLQRAGG*
Ga0164307_116840242	3300012987	Soil	VSTATERRILTAPAAVARAAARMAALPEQRWILMQPREVRISFAKEVLGREDAELRQQVWMLRQPKDVRESFIADVLLAEDG*
Ga0164305_108165831	3300012989	Soil	ERRILTAPAAVARAAARMAALPEQRWILMQPREVRISFAKEVLGREDAELRQQVWMLRQPKDVRESFIADVLLAEDG*
Ga0157377_102559142	3300014745	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSEAVRESYIAGVLLSAAG*
Ga0173483_109703861	3300015077	Soil	VRRITDRSAGPDPLPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILVQPRAVRQSYAEEVFGRPDEALRQQIWMLRQAKAVRESYIAGVLLGAAG*
Ga0190272_101580783	3300018429	Soil	VPNANERRILTAPAAVARAPSKVATQPEQRWILTQPREVRRSYAEDVFGRPDEELQQQIWMLRQAKAVRESYIAEVLQAKPG
Ga0190272_129164302	3300018429	Soil	VSNANERRILTAPAPVARAAARVAALPEQRWILTQPRDVRRSYAADVLGHPDEELRQQIWMLRQTKAVRESYIAVVLEAPRG
Ga0190275_108772292	3300018432	Soil	VSSPTERRVLTAPGPVAKAAARVAALPEQRWILGQPRDVRQSYADHVLGRPDEALQQQIWMLRQKKEVRESYIAEVLLAAEG
Ga0190275_111343392	3300018432	Soil	VSSSTERKVLTAPGPVAKAAARVAALPEQRWILQQSREVRQSYAENVLGRPDEDLQQQIWMLRQTKAVRESYIEAVLLAEGG
Ga0190275_114401162	3300018432	Soil	VSSTEHRVLTAPGPVAKAAARMAPEPEQRWLLGQPREIRRSYAEAVLGRPDEELLRQVWMLRQPKAVRESYIREVLLAGAGPPRQ
Ga0190268_114216341	3300018466	Soil	VSSSTERRVLTAPGPVARAAARVAALPEQRWILQQPREVRQSYAEHVLGRPDEDLQQQIWMLRQTKAVRESYIAEVLLAEGG
Ga0190270_108900872	3300018469	Soil	VPNANERRILTAPAALARAAAKVATLPEQRWILMQPRDVRRSYAEEVFGRPDEALRQQVWMLRQPKDVRESYIADVLLAPAG
Ga0190270_110224332	3300018469	Soil	VSSTTERRVLTSPGPVARAAAWVATLPEQRWILLQSREVRQSYAEEVLGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAGG
Ga0190270_118206812	3300018469	Soil	VSNANERRILTAPAPVARAAARVVALPEQRWILTQPRDVRRSYAENVLGHPDENLRQQIWMLRQTKAVRESYIAVVLEASRG
Ga0190274_129107101	3300018476	Soil	RSAVPDALPQSGAVSSTTERRVLTAPGAVAKAAARVATLPEQRWILCQPRDVRQSYADNVLGRPDEALQQQIWMLRQKQEVRESYIADVLLAAEG
Ga0222622_108210722	3300022756	Groundwater Sediment	VSSNTERRVLTSPGPVARAAARMAALPEQRWILLQPREVRQSYAEQVLGRHDEELQRQIWMLRQPTAVRESYIADVLLATHG
Ga0207688_106894742	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLSAGG
Ga0207645_101449142	3300025907	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLLSAGG
Ga0207643_104459162	3300025908	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAAG
Ga0207660_109175981	3300025917	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVLGRPDEALRQQIWMLRQSKAVRESYISGVLLSAGG
Ga0207662_113594502	3300025918	Switchgrass Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRES
Ga0207681_103778932	3300025923	Switchgrass Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTEAVRESYIAGVLLSAGG
Ga0207687_108791992	3300025927	Miscanthus Rhizosphere	VSNATERRILTAPTPVARAAAKVAALPEQRWILLQPREVRQSFAEEVLGQPDIELRQQIWMLRQARAVRESYIADVLLAADG
Ga0207687_115662511	3300025927	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTEA
Ga0207690_104899212	3300025932	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG
Ga0207706_105332472	3300025933	Corn Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLSAGG
Ga0207709_105137951	3300025935	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRE
Ga0207669_118712982	3300025937	Miscanthus Rhizosphere	LPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLGAGG
Ga0207704_102331812	3300025938	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAGG
Ga0207691_104590282	3300025940	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAVARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG
Ga0207668_110228491	3300025972	Switchgrass Rhizosphere	DLRSARRPRSPPCSTRWVRRITDRSAGPEPLPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAGG
Ga0207640_107274121	3300025981	Corn Rhizosphere	RITDRSAGPEPLPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLSAGG
Ga0207678_111292691	3300026067	Corn Rhizosphere	SPPCSTRWVRRITDRSAGPEPLPQSVGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREIRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG
Ga0207683_108365342	3300026121	Miscanthus Rhizosphere	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG
Ga0272482_102819122	3300028578	Soil	VSSSPTERRVLTAPGPVAKAAARVAALPEQRWILSQPREVRRSYADHVLGRPDEALQQQIWMLRQKQDVRESYIAQVLLAGEPA
Ga0247818_108120652	3300028589	Soil	LAAVDLSGVSNANERRILTAPAPVARAAARVASLPEQRWILAQPRDVRRSYAEEVLGHPDEPLRQQIWMLRQTKAVRESYIADVLEAPRG
Ga0307315_102541802	3300028721	Soil	VSNATERRILTAPAPVARAAARVAALPEQRWILMQPREVRQSFAEEVLGRPDMELRQQVWMLRQTRDVRESFIADVLLAADG
Ga0307282_101781092	3300028784	Soil	VSNATERRILTAPAAVARAAARMTALPEQRWILTQPREVRVSFAEEVLGREDAELRQQVWMLRQPRDVRESFIADVLLAEDG
Ga0247825_110363702	3300028812	Soil	VSNANERRILTAPAPVARAAARVAALPEQRWILAQPRDVRRSYAEEILGHPDEPLRQQIWMLRQTKAVRESYIADVLEAPRG
Ga0307300_100837822	3300028880	Soil	VSSNTERRVLTSPGPVARAAARMAALPEQRWILLQPREVRQSYAEQVLGRHDEELQRQIWMLRQPKAVRESYIADVLLATHG
Ga0307277_104544452	3300028881	Soil	VSTAERAILTAPTAVARAAARMAAVPEQRWILMQPREVRQSFAAEVLGRDDEERRQQIWMLRQRRDVRESYIRQVLLAQDG
Ga0247826_103761582	3300030336	Soil	VSNANERRILTAPAPVARAAARVASLPEQRWILAQPRDVRRSYAEEVLGHPDEPLRQQIWMLRQTKAVRESYIADVLEAPRG
Ga0247826_117856972	3300030336	Soil	VSTNTERRVLTAPGPVARAAARVAALPEQRWILQQPREVRQSYAEHVLGRPDENLQQQIWMLRQVKAVRESYIKHVLLAEHG
Ga0247826_117907812	3300030336	Soil	MSASPTERRVLTAPGPVARAAARVASLPEQRWILGQPRDVRQSYADNVLGRPDEPLRQQIWMLRQTGAVRESYIAQVLLAPEG
Ga0299913_100909014	3300031229	Soil	VSSSPTERRVLTAPGPVAKAAARVAALPEQRWILSQPREVRQSYADHVLGRPDEALQQQIWMLRQKQEVRESYIAQVLLAGEPA
Ga0307405_109262392	3300031731	Rhizosphere	VSSTTERRVLTAPAPVAKAAARVATLPAQRWILGQPRDVRQSYADHVLGRADEALQQQIWMLRQKQEVRESYIAEVLLAAEG
Ga0310892_108080722	3300031858	Soil	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRLSYAEEVLGRPDEALHQQIWMLRQSKAVRESYIAGVLLSAGG
Ga0307407_104603962	3300031903	Rhizosphere	VSSSTERRVLTAPAPVAKAAARVATLPAQRWILGQPRDVRQSYADHVLGRPDEALQQQIWMLRQKQEVRESYIADVLLAAEG
Ga0307412_113534932	3300031911	Rhizosphere	VSNANERRILTAPAPVARAAAKVAAQPEQRWILTQPRDVRRSYAEDVLGHPDEELRQQIWMLRQAKPVRESYIADVLEAPRG
Ga0308175_1010793382	3300031938	Soil	VSSPTERRVLTAPGPVARAAARVTALPEQRWILCQPREVRQSYADEVLGRPDEALQQQIWMLRQKK
Ga0307409_1004738531	3300031995	Rhizosphere	WVRRITDRSAVPDALPQSGGVSASPTERRVLTAPGPVAKAAARVAALPEQRWILCQPREVRQSYADHVLGRPDEELQQQIWMLRQKQEVRESYIADVLLAAEG
Ga0307409_1018415652	3300031995	Rhizosphere	VSSSTERRVLTAPAPVAKAAARVATLPAQRWILGQPRDVRQSYADHVLGRPDEALQQQIWMLRQKQEVRESYIAEVLLAAEG
Ga0310902_106787052	3300032012	Soil	VSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPRKVRQSYAEEVFGRPDEALRQQIWMLRQTKAVRESYIAGVLLGAAG
Ga0310906_114800572	3300032013	Soil	VSNANERRILTAPAPVARAAARVAALPEQRWILTQPRDVRRSYAEDVLGHPDEQLRQQVWMLRQAKAVRESYIADVLEAQRG
Ga0310890_108958152	3300032075	Soil	VSNANERRILTAPAPVARAAARVASLPEQRWILAQPRDVRRSYAEEVLGHPDEPLRQQIWMLRQTKAVRESYIADVLEAQRG
Ga0247830_104819991	3300033551	Soil	VGVSSTTERRVLTSPGPVARAAARVATLPEQRWILLQPREVRQSYAEEVFGRPDEALRQQIWMLRQSKAVRESYIAGVLLSAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090840

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences