Metagenome Family F090826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090826
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Number of Associated Samples	77
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.41 %
% of genes near scaffold ends (potentially truncated)	47.22 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.704 % of family members)
Environment Ontology (ENVO)	Unclassified (69.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.38% β-sheet: 0.00% Coil/Unstructured: 53.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07690	MFS_1	17.59
PF00805	Pentapeptide	7.41
PF07758	DUF1614	5.56
PF00536	SAM_1	5.56
PF08450	SGL	3.70
PF13567	DUF4131	2.78
PF13191	AAA_16	0.93
PF00884	Sulfatase	0.93
PF07687	M20_dimer	0.93
PF00198	2-oxoacid_dh	0.93
PF00085	Thioredoxin	0.93
PF03772	Competence	0.93
PF07969	Amidohydro_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	7.41
COG4089	Uncharacterized membrane protein	Function unknown [S]	5.56
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	3.70
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	3.70
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.93
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.44 %
Unclassified	root	N/A	30.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.44 %
Unclassified	root	N/A	30.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.44 %
Unclassified	root	N/A	30.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.11 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.11 %
Azospirillum thiophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum thiophilum	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10036658	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300005332\|Ga0066388_103945056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	757	Open in IMG/M
3300005332\|Ga0066388_105211588	Not Available	660	Open in IMG/M
3300005764\|Ga0066903_100613675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1889	Open in IMG/M
3300005764\|Ga0066903_104190511	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300006172\|Ga0075018_10281808	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300010048\|Ga0126373_11768698	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300010048\|Ga0126373_12141070	Not Available	621	Open in IMG/M
3300010359\|Ga0126376_12665511	Not Available	549	Open in IMG/M
3300010360\|Ga0126372_11517311	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010361\|Ga0126378_10366035	Not Available	1552	Open in IMG/M
3300010361\|Ga0126378_10410046	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300010361\|Ga0126378_11755498	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300010366\|Ga0126379_10109366	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300010366\|Ga0126379_13320792	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010376\|Ga0126381_100026016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum thiophilum	6922	Open in IMG/M
3300010376\|Ga0126381_100904439	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300012077\|Ga0153929_1089552	Not Available	557	Open in IMG/M
3300012971\|Ga0126369_10256272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1725	Open in IMG/M
3300012971\|Ga0126369_10820485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300012971\|Ga0126369_10851893	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300016270\|Ga0182036_10755164	Not Available	790	Open in IMG/M
3300016270\|Ga0182036_11017186	Not Available	683	Open in IMG/M
3300016270\|Ga0182036_11213310	Not Available	628	Open in IMG/M
3300016270\|Ga0182036_11804836	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300016294\|Ga0182041_10427240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300016294\|Ga0182041_11413515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300016319\|Ga0182033_12073356	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300016357\|Ga0182032_10202802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1511	Open in IMG/M
3300016387\|Ga0182040_11249733	Not Available	626	Open in IMG/M
3300016404\|Ga0182037_10762253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300016404\|Ga0182037_12023495	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300016422\|Ga0182039_11210449	Not Available	682	Open in IMG/M
3300020579\|Ga0210407_10856319	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021181\|Ga0210388_11781067	Not Available	508	Open in IMG/M
3300021405\|Ga0210387_10769055	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300021406\|Ga0210386_11796345	Not Available	505	Open in IMG/M
3300021420\|Ga0210394_10533184	Not Available	1033	Open in IMG/M
3300021560\|Ga0126371_10387228	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300021560\|Ga0126371_10441859	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300021560\|Ga0126371_13094799	Not Available	563	Open in IMG/M
3300027071\|Ga0209214_1001255	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300027855\|Ga0209693_10286789	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031231\|Ga0170824_123181200	Not Available	805	Open in IMG/M
3300031543\|Ga0318516_10106177	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300031543\|Ga0318516_10374977	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031544\|Ga0318534_10303107	Not Available	920	Open in IMG/M
3300031544\|Ga0318534_10346596	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031545\|Ga0318541_10022605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3028	Open in IMG/M
3300031546\|Ga0318538_10200195	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031561\|Ga0318528_10489440	Not Available	660	Open in IMG/M
3300031573\|Ga0310915_10924733	Not Available	610	Open in IMG/M
3300031640\|Ga0318555_10141158	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300031640\|Ga0318555_10551690	Not Available	624	Open in IMG/M
3300031668\|Ga0318542_10225236	Not Available	950	Open in IMG/M
3300031679\|Ga0318561_10332676	Not Available	832	Open in IMG/M
3300031680\|Ga0318574_10377754	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031681\|Ga0318572_10609325	Not Available	651	Open in IMG/M
3300031719\|Ga0306917_10447599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300031723\|Ga0318493_10106577	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300031724\|Ga0318500_10156327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300031736\|Ga0318501_10575024	Not Available	617	Open in IMG/M
3300031754\|Ga0307475_10872753	Not Available	711	Open in IMG/M
3300031764\|Ga0318535_10149501	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031764\|Ga0318535_10324930	Not Available	688	Open in IMG/M
3300031765\|Ga0318554_10034413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2732	Open in IMG/M
3300031771\|Ga0318546_10215938	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300031778\|Ga0318498_10172469	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031792\|Ga0318529_10026636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2359	Open in IMG/M
3300031793\|Ga0318548_10520873	Not Available	580	Open in IMG/M
3300031794\|Ga0318503_10006299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2940	Open in IMG/M
3300031819\|Ga0318568_10240280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300031819\|Ga0318568_10765760	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031821\|Ga0318567_10200084	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031846\|Ga0318512_10754975	Not Available	500	Open in IMG/M
3300031859\|Ga0318527_10466515	Not Available	538	Open in IMG/M
3300031879\|Ga0306919_11097954	Not Available	606	Open in IMG/M
3300031890\|Ga0306925_10166564	All Organisms → cellular organisms → Bacteria	2374	Open in IMG/M
3300031890\|Ga0306925_10596732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300031897\|Ga0318520_10139987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1394	Open in IMG/M
3300031897\|Ga0318520_10445453	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031910\|Ga0306923_10092128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3412	Open in IMG/M
3300031910\|Ga0306923_11263212	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031910\|Ga0306923_11523849	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031912\|Ga0306921_10326841	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300031912\|Ga0306921_11066748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300031941\|Ga0310912_10403937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300031941\|Ga0310912_10571060	Not Available	880	Open in IMG/M
3300031945\|Ga0310913_10085107	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300031946\|Ga0310910_10047835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3002	Open in IMG/M
3300031947\|Ga0310909_10136115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2007	Open in IMG/M
3300031947\|Ga0310909_11419297	Not Available	555	Open in IMG/M
3300031959\|Ga0318530_10230557	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300032010\|Ga0318569_10142785	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300032039\|Ga0318559_10527008	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032043\|Ga0318556_10388223	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032044\|Ga0318558_10029673	Not Available	2296	Open in IMG/M
3300032054\|Ga0318570_10107950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300032063\|Ga0318504_10306278	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300032065\|Ga0318513_10131564	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300032076\|Ga0306924_10008026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	10627	Open in IMG/M
3300032089\|Ga0318525_10094817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1518	Open in IMG/M
3300032091\|Ga0318577_10014542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3170	Open in IMG/M
3300032091\|Ga0318577_10115233	Not Available	1266	Open in IMG/M
3300032091\|Ga0318577_10645458	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032094\|Ga0318540_10002196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6629	Open in IMG/M
3300032094\|Ga0318540_10124181	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300033289\|Ga0310914_11212443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.15%
Aquatic	Environmental → Aquatic	0.93%
Fungi	Host-Associated → Fungi	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.15%
Sediment	Environmental → Aquatic → Sediment	0.93%
Mycelium	Host-Associated → Fungi → Mycelium	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.67%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012077	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ013 MetaG	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100366582	3300001867	Forest Soil	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDTIGASAAQQRGVVDRVPAKPAVPEAAMVR*
Ga0066388_1039450561	3300005332	Tropical Forest Soil	VDVGTWLRRLDLGGSTTLAARLDAGDLRPGVGGRFVGIDDAIGASAAQQGGLVDGVPAKPAAP
Ga0066388_1052115882	3300005332	Tropical Forest Soil	VEIGTWLRSLGLGDSTALAARLDAGDLGLGVAGRLVGIYDAIGASAAQQGDVVDGVSVKPAVLEAAMVR*
Ga0066903_1006136752	3300005764	Tropical Forest Soil	VGVDSWLRSLCPGGSTALAARLDAGDLRPDVAGGVVGFDDAIGASATQQGGVVDGVPGKSAALGAVTVR*
Ga0066903_1041905111	3300005764	Tropical Forest Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVSGGLVGIGDAIGASAALQGGVVDGVP
Ga0075018_102818082	3300006172	Watersheds	VEIGTWLRSLGLGDSTALAARLDAGGVRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR*
Ga0126373_117686982	3300010048	Tropical Forest Soil	VEIGTLPRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR*
Ga0126373_121410701	3300010048	Tropical Forest Soil	VEVDSWLRSLCLGGSTALAARLDAGDLRPGVAGGVVGFDDAIGASATQQGGVVDGVPAKSAVLGAATVR*
Ga0126376_126655112	3300010359	Tropical Forest Soil	VEIGTWRRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR*
Ga0126372_115173111	3300010360	Tropical Forest Soil	PATRSAVEIGTWPRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR*
Ga0126378_103660353	3300010361	Tropical Forest Soil	VGVDSWLRSLCPGDSTALAARLDAGDLRPGVAGGVVGFDDAIGASATQQGGVVDGVPGKSAALGAVTVR*
Ga0126378_104100462	3300010361	Tropical Forest Soil	VDVGTWLQSLGLGGSTALAARHDAGDLGPGGAGGFVGIDDAIGASAAPQGGVVDGVPAKPTPPEAAVR*
Ga0126378_117554982	3300010361	Tropical Forest Soil	VDVGTWLRRLDLGGSTTLAARLDAGDLRPGVGGRFVGIDDAIGASAAQQGGLVDGVPAKPAAPEAATVR*
Ga0126379_101093662	3300010366	Tropical Forest Soil	VDVGTWLQSLGLGGSTTLAARHDAGNLGPGVAGGFAGIDDAIGASAAPQGGVVNGVPAKPTPPEAAVR*
Ga0126379_133207922	3300010366	Tropical Forest Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKSAVPEAAMVR*
Ga0126381_1000260161	3300010376	Tropical Forest Soil	VDVGTWLHSLGLGGSTTLAARHDAGDLGPGVAGGFVGIDDAIGASAAPQGGVVDGVPAKPTPPEAAVR*
Ga0126381_1009044392	3300010376	Tropical Forest Soil	VGVDSWLRSLCLGGSTALAARLDAGDLRPGVAGGVVGFDDAIGASATQQGGVVDGVPGKSAALGAVTVR*
Ga0153929_10895521	3300012077	Attine Ant Fungus Gardens	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR*
Ga0126369_102562722	3300012971	Tropical Forest Soil	VDVGTWLQSLGLGGSTALAARHDAGDLGPGGAGGFVGIDDAIGASAAPQGGVVNGVPAKPTPPEAAVR*
Ga0126369_108204852	3300012971	Tropical Forest Soil	VEIGTWLRSLGLGDSTALAARLDAGDLGLGVAGRLVGIYDAIGASAAQQGDVVDGVPAKPAVPEAAMVR*
Ga0126369_108518932	3300012971	Tropical Forest Soil	VGVDSWLRSLCPGGSTALAARLDAGDLRPGVAGGVVGFDDAIGASATQQGGVVDGVPGKSAALGAVTAR*
Ga0182036_107551641	3300016270	Soil	VKIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAM
Ga0182036_110171861	3300016270	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMV
Ga0182036_112133101	3300016270	Soil	VEIGTWLRSLGLGDSTALAVRLDEGDLRLGVAGRQVSIYDAIGASAAQQGGVVDRVPAKPAVPEA
Ga0182036_118048361	3300016270	Soil	HRPATRSAVEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAGQQGGVVDGVPAKPAVPKAAMVR
Ga0182041_104272402	3300016294	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAA
Ga0182041_114135152	3300016294	Soil	VEIGTWLRRLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAA
Ga0182033_120733562	3300016319	Soil	SHRPATRSAVEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKPAVPEAAIVR
Ga0182032_102028023	3300016357	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPA
Ga0182040_112497331	3300016387	Soil	VEIGTWLRSLGLGDSTPLGARLDAGDLRLGVAGRLVGIYEAIGASAAQQGDVVDGVPAKPAVPEAAMVR
Ga0182037_107622531	3300016404	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKP
Ga0182037_120234952	3300016404	Soil	NLASKSRLSHRPATRSAVEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0182039_112104491	3300016422	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAK
Ga0210407_108563192	3300020579	Soil	LRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0210388_117810671	3300021181	Soil	VEIGTWLRSLGLGDSTALAARLDAGGSAPWRRRPAGRHLRRDRCERSTAGGVVDGVPAKPAVPEAAMV
Ga0210387_107690552	3300021405	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGAVDRVPAKPAVPEAAMVR
Ga0210386_117963451	3300021406	Soil	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0210394_105331842	3300021420	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGAVVDRVPAKPAVPEAAMVR
Ga0126371_103872282	3300021560	Tropical Forest Soil	SKSRLSHRPATRSAVDVGTWLHSLGLGGSTTLAARHDAGDLGPGVAGGFVGIDDAIGASAAPQGGVVDGVPAKPTPPEAAVR
Ga0126371_104418592	3300021560	Tropical Forest Soil	VEVDSWLRSLCLGGSTALAARLDAGDLRPGVAGGVVGFDDAIGASATQQGGVVDGVPGKSAALGAVTVR
Ga0126371_130947991	3300021560	Tropical Forest Soil	VKIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDATGASAARQGGVVDGVPAKPAVPEAAMVR
Ga0209214_10012552	3300027071	Forest Soil	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYHAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0209693_102867892	3300027855	Soil	GTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0170824_1231812001	3300031231	Forest Soil	VEIGTWLRSLGLGGSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPA
Ga0318516_101061772	3300031543	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318516_103749771	3300031543	Soil	PATRSAVEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318534_103031072	3300031544	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPKAAMVR
Ga0318534_103465962	3300031544	Soil	VEIGTWLRSLGLGDSTALAVRLDAGDLRLGVAGRQVSIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318541_100226051	3300031545	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEA
Ga0318538_102001952	3300031546	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318528_104894401	3300031561	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0310915_109247331	3300031573	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAM
Ga0318555_101411582	3300031640	Soil	ATRSAVEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318555_105516901	3300031640	Soil	VKIGTWLRSLGLGDSTALAARLDAGDLCLGVAGRLVGIYDAISASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318542_102252362	3300031668	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318561_103326761	3300031679	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKPAVPEAAIVR
Ga0318574_103777542	3300031680	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318572_106093251	3300031681	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYGAIGASAAQQGGVVDGVPAKPAVP
Ga0306917_104475992	3300031719	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEA
Ga0318493_101065772	3300031723	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAGQQGGVVDGVPAKPAVPKAAMVR
Ga0318500_101563272	3300031724	Soil	VEIGTWLQSLGLGDSTAPAARLDAGDLRLGVAGGLVGIGDAIGVSAAQQRGVVDGVPAKPAVPEAAMVR
Ga0318501_105750241	3300031736	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAGPEAAMVR
Ga0307475_108727531	3300031754	Hardwood Forest Soil	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQQGGVVNRVPAKPAVPEAAMVR
Ga0318535_101495012	3300031764	Soil	VEIGTWLRSLGLGDSTALAVRLDAGDLRLGVAGRQVSIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318535_103249301	3300031764	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAM
Ga0318554_100344134	3300031765	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKP
Ga0318546_102159382	3300031771	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPVVPEAAMVR
Ga0318498_101724692	3300031778	Soil	VEIGTWLQSLGLGDSTALAARLHAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318529_100266362	3300031792	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPPMPEAAMVR
Ga0318548_105208731	3300031793	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPE
Ga0318503_100062992	3300031794	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318568_102402802	3300031819	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPA
Ga0318568_107657601	3300031819	Soil	VEIGTWLRSLGLGDSTALAVRLDEGDLRLGVAGRQVSIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318567_102000841	3300031821	Soil	VSHRPATRSAVEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKPAVPEAAIVR
Ga0318512_107549751	3300031846	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPE
Ga0318527_104665151	3300031859	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKP
Ga0306919_110979541	3300031879	Soil	VEIGTWLRRLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAM
Ga0306925_101665642	3300031890	Soil	VEIGTWLRSLGLGDSTALAVRLDEGDLRLGVAGRQVSIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0306925_105967322	3300031890	Soil	VEIGTWLRRLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318520_101399872	3300031897	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGLAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318520_104454531	3300031897	Soil	RSAVEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0306923_100921282	3300031910	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGPLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0306923_112632122	3300031910	Soil	LSHRPATRSAVEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIAASAAQQGGVVDGVPAKPAVPKAAMVR
Ga0306923_115238492	3300031910	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGLAGGLVGIGDAIGASAAQQGGVVDGVPAKPPMPEAAMVR
Ga0306921_103268411	3300031912	Soil	GLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0306921_110667481	3300031912	Soil	VEIGTWLRRLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAK
Ga0310912_104039371	3300031941	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVP
Ga0310912_105710601	3300031941	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPA
Ga0310913_100851073	3300031945	Soil	WLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0310910_100478354	3300031946	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGTSAAQQGGVVDGVPAKPAVPEAAI
Ga0310909_101361153	3300031947	Soil	VEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIAAQQGGVVDRVPAKPAVPEAAMVR
Ga0310909_114192971	3300031947	Soil	MRSAVEIGTWLRSLGLGDAPALGARLDAGDLRLGVAGRLVGIYDAIGASAAQQGDVVDGVPAKPAVPEAAMAR
Ga0318530_102305572	3300031959	Soil	VDIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318569_101427852	3300032010	Soil	VEIGTWLRSLGLGDSTALAARLDAGGLRLGVAGRLVGIYDAIGASAAQEGGVVDGVPAKPAVPEAAMVR
Ga0318559_105270082	3300032039	Soil	SATRSAVEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318556_103882232	3300032043	Soil	PATRSAVEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318558_100296732	3300032044	Soil	VEIGTWLQSLGLGDSTALAARLHAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPE
Ga0318570_101079502	3300032054	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPVVPE
Ga0318504_103062781	3300032063	Soil	RSAGEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318513_101315642	3300032065	Soil	VEIGTWLQSLGLGDSTALAARLHAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPKAAMVR
Ga0306924_1000802611	3300032076	Soil	VEIGTWLRSLGLGDSTALAARLDGRDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAAMVR
Ga0318525_100948172	3300032089	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAV
Ga0318577_100145421	3300032091	Soil	VEIGTWLRSLGLGDSTALAARLDGGDLRLGVAGRLVGIYDAIGASAAQQGGVVDGVPAKPAVPEAA
Ga0318577_101152332	3300032091	Soil	VEIGTWLQSLGLGDLTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPKAAMVR
Ga0318577_106454581	3300032091	Soil	HRPATRSAVEIGTWLRSLGLGDSTALAARLDAGDLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0318540_100021962	3300032094	Soil	VEIGTWLQSLGLGDSTALAARLDAGDLRLGVAGGLVGIGDAIGASAAQQGGVVDGVPAKPAVPEAAIVR
Ga0318540_101241812	3300032094	Soil	VDIGTWLRSLGLGDATALAARLDAGDLRLGVAGRLVGIYGAIGASAAQQGGVVDRVPAKPAVPEAAMVR
Ga0310914_112124432	3300033289	Soil	VEIGTWLRSLGLGDSTALAARLGAGYLRLGVAGRLVGIYDAIGASAAQQGGVVDRVPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences