Metagenome / Metatranscriptome Family F090785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	73 residues
Representative Sequence	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDIV
Number of Associated Samples	98
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.30 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.52 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.444 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.296 % of family members)
Environment Ontology (ENVO)	Unclassified (18.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.54% β-sheet: 0.00% Coil/Unstructured: 59.46%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01654	Cyt_bd_oxida_I	9.26
PF01471	PG_binding_1	3.70
PF04542	Sigma70_r2	1.85
PF02322	Cyt_bd_oxida_II	1.85
PF02627	CMD	0.93
PF13565	HTH_32	0.93
PF13424	TPR_12	0.93
PF00005	ABC_tran	0.93
PF13649	Methyltransf_25	0.93
PF03734	YkuD	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	9.26
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.85
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	1.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.85
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.93
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.93
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
All Organisms	root	All Organisms	30.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
cellular organisms	root	All Organisms → cellular organisms	30.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.30 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10.19 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.78 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.33 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.78 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.93 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.93 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.33 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.85 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.93 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.44 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.33 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1.85 %
Sphaerisporangium melleum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → Sphaerisporangium melleum	0.93 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	0.93 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_181864	Not Available	712	Open in IMG/M
3300003368\|JGI26340J50214_10161121	Not Available	560	Open in IMG/M
3300003505\|JGIcombinedJ51221_10422038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	541	Open in IMG/M
3300004635\|Ga0062388_102447338	Not Available	547	Open in IMG/M
3300005164\|Ga0066815_10000283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2921	Open in IMG/M
3300005177\|Ga0066690_10355336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	993	Open in IMG/M
3300005435\|Ga0070714_101891311	Not Available	582	Open in IMG/M
3300005439\|Ga0070711_101918012	Not Available	520	Open in IMG/M
3300005445\|Ga0070708_100945550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	808	Open in IMG/M
3300005546\|Ga0070696_101497035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	578	Open in IMG/M
3300005575\|Ga0066702_11001265	Not Available	500	Open in IMG/M
3300005614\|Ga0068856_102615368	Not Available	511	Open in IMG/M
3300006032\|Ga0066696_10797743	Not Available	603	Open in IMG/M
3300006052\|Ga0075029_101093151	Not Available	553	Open in IMG/M
3300006173\|Ga0070716_100694707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300006174\|Ga0075014_100569116	Not Available	644	Open in IMG/M
3300006804\|Ga0079221_11103866	Not Available	607	Open in IMG/M
3300006806\|Ga0079220_11530180	Not Available	574	Open in IMG/M
3300009137\|Ga0066709_101521276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	964	Open in IMG/M
3300009137\|Ga0066709_103625360	Not Available	560	Open in IMG/M
3300009174\|Ga0105241_12430846	Not Available	523	Open in IMG/M
3300009520\|Ga0116214_1145309	Not Available	882	Open in IMG/M
3300009523\|Ga0116221_1157102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	989	Open in IMG/M
3300009524\|Ga0116225_1009192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5492	Open in IMG/M
3300009524\|Ga0116225_1518066	Not Available	530	Open in IMG/M
3300009545\|Ga0105237_11315962	Not Available	729	Open in IMG/M
3300009698\|Ga0116216_10398415	Not Available	835	Open in IMG/M
3300009764\|Ga0116134_1063236	Not Available	1388	Open in IMG/M
3300009839\|Ga0116223_10483071	Not Available	722	Open in IMG/M
3300010358\|Ga0126370_11547528	Not Available	632	Open in IMG/M
3300010379\|Ga0136449_101719978	Not Available	944	Open in IMG/M
3300010379\|Ga0136449_103387048	Not Available	610	Open in IMG/M
3300010379\|Ga0136449_104386154	Not Available	520	Open in IMG/M
3300010401\|Ga0134121_11934266	Not Available	620	Open in IMG/M
3300012201\|Ga0137365_10394019	Not Available	1022	Open in IMG/M
3300012349\|Ga0137387_10772679	Not Available	695	Open in IMG/M
3300012356\|Ga0137371_10537770	Not Available	900	Open in IMG/M
3300012356\|Ga0137371_10999515	Not Available	634	Open in IMG/M
3300012397\|Ga0134056_1267017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300012407\|Ga0134050_1104981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300012478\|Ga0157328_1032183	Not Available	502	Open in IMG/M
3300013104\|Ga0157370_11454887	Not Available	616	Open in IMG/M
3300015371\|Ga0132258_11571494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1661	Open in IMG/M
3300017946\|Ga0187879_10833187	Not Available	515	Open in IMG/M
3300017947\|Ga0187785_10425146	Not Available	645	Open in IMG/M
3300017955\|Ga0187817_10316787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300017961\|Ga0187778_10226559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1196	Open in IMG/M
3300017966\|Ga0187776_11169632	Not Available	575	Open in IMG/M
3300017974\|Ga0187777_11412607	Not Available	514	Open in IMG/M
3300017993\|Ga0187823_10137058	Not Available	762	Open in IMG/M
3300018037\|Ga0187883_10157396	Not Available	1169	Open in IMG/M
3300018060\|Ga0187765_10511440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	762	Open in IMG/M
3300018431\|Ga0066655_10706755	Not Available	682	Open in IMG/M
3300018482\|Ga0066669_11689338	Not Available	581	Open in IMG/M
3300020140\|Ga0179590_1167466	Not Available	602	Open in IMG/M
3300020579\|Ga0210407_10952423	Not Available	656	Open in IMG/M
3300020580\|Ga0210403_11088655	Not Available	621	Open in IMG/M
3300020581\|Ga0210399_10917122	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300020582\|Ga0210395_10532332	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021088\|Ga0210404_10516894	Not Available	675	Open in IMG/M
3300021171\|Ga0210405_10126590	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300021180\|Ga0210396_11376233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	584	Open in IMG/M
3300021384\|Ga0213876_10667138	Not Available	553	Open in IMG/M
3300021403\|Ga0210397_11409799	Not Available	541	Open in IMG/M
3300021404\|Ga0210389_10509635	Not Available	946	Open in IMG/M
3300021404\|Ga0210389_10558870	Not Available	900	Open in IMG/M
3300021405\|Ga0210387_10901824	Not Available	778	Open in IMG/M
3300024227\|Ga0228598_1065598	Not Available	724	Open in IMG/M
3300025906\|Ga0207699_11210314	Not Available	559	Open in IMG/M
3300025920\|Ga0207649_11011541	Not Available	654	Open in IMG/M
3300025929\|Ga0207664_11770393	Not Available	540	Open in IMG/M
3300026310\|Ga0209239_1306434	Not Available	550	Open in IMG/M
3300026326\|Ga0209801_1321295	Not Available	547	Open in IMG/M
3300026899\|Ga0209326_1004794	Not Available	1016	Open in IMG/M
3300027604\|Ga0208324_1175590	Not Available	576	Open in IMG/M
3300027765\|Ga0209073_10521287	Not Available	503	Open in IMG/M
3300027879\|Ga0209169_10199734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300031090\|Ga0265760_10034727	Not Available	1492	Open in IMG/M
3300031090\|Ga0265760_10366636	Not Available	517	Open in IMG/M
3300031544\|Ga0318534_10579291	Not Available	638	Open in IMG/M
3300031679\|Ga0318561_10301858	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031681\|Ga0318572_10844328	Not Available	544	Open in IMG/M
3300031681\|Ga0318572_10940114	Not Available	513	Open in IMG/M
3300031682\|Ga0318560_10717206	Not Available	540	Open in IMG/M
3300031719\|Ga0306917_11532153	Not Available	512	Open in IMG/M
3300031740\|Ga0307468_100916577	Not Available	761	Open in IMG/M
3300031771\|Ga0318546_11212963	Not Available	530	Open in IMG/M
3300031799\|Ga0318565_10465304	Not Available	611	Open in IMG/M
3300031890\|Ga0306925_10191264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2206	Open in IMG/M
3300031894\|Ga0318522_10406166	Not Available	516	Open in IMG/M
3300031910\|Ga0306923_10130162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2862	Open in IMG/M
3300031912\|Ga0306921_12026947	Not Available	612	Open in IMG/M
3300031947\|Ga0310909_10458278	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032010\|Ga0318569_10311296	Not Available	733	Open in IMG/M
3300032066\|Ga0318514_10133175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1281	Open in IMG/M
3300032074\|Ga0308173_10899544	Not Available	819	Open in IMG/M
3300032076\|Ga0306924_11617239	All Organisms → cellular organisms → Bacteria → Terrabacteria group	682	Open in IMG/M
3300032091\|Ga0318577_10209356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	933	Open in IMG/M
3300032160\|Ga0311301_10752274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1353	Open in IMG/M
3300032160\|Ga0311301_11189965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	978	Open in IMG/M
3300032174\|Ga0307470_10741782	Not Available	753	Open in IMG/M
3300032770\|Ga0335085_10082564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4210	Open in IMG/M
3300032783\|Ga0335079_10214874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2128	Open in IMG/M
3300032783\|Ga0335079_11518725	Not Available	661	Open in IMG/M
3300032805\|Ga0335078_10427823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1727	Open in IMG/M
3300032828\|Ga0335080_12273774	Not Available	519	Open in IMG/M
3300032892\|Ga0335081_11869073	Not Available	646	Open in IMG/M
3300033158\|Ga0335077_10448458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → Sphaerisporangium melleum	1375	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Aquatic	Environmental → Aquatic	8.33%
Plants	Host-Associated → Plants	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Freshwater	Environmental → Aquatic → Freshwater	6.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Sediment	Environmental → Aquatic → Sediment	1.85%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03111630	2199352025	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAAAHGRLPKLPSVT
JGI26340J50214_101611212	3300003368	Bog Forest Soil	MTSTPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSVYAPLADRLPTLSSVNVPFADRLPKPEDVVASGYDFAEHL
JGIcombinedJ51221_104220381	3300003505	Forest Soil	MASTPTRDMQEEFLAATRKSQETVVRAIKTWVEAVKTVTPKMPSVYAPLADRLPKLPSVNVPFADRLPKPEDVVASGYDFAEHLLA
Ga0062388_1024473381	3300004635	Bog Forest Soil	MASTPTRDLQDEFLAATRKSQETMVRAIKTWVETVRTVTPKLPSAYVPLADRLPKLL
Ga0066815_100002833	3300005164	Soil	MASTPTRDLPEEFLAATRKSQEVAIRAIKTWVETVRTVTPKLPSAYGPLTDRLPKLPSVTAPFADRLPKPEDVVASGYDF
Ga0066690_103553362	3300005177	Soil	MPSTRTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPNLPSVYAPLADRLPKLPSVTVPFADKLPKP
Ga0070714_1018913111	3300005435	Agricultural Soil	MASTPTRDLPEEFLAATRRSQETMIRAIRTWVETVRTVTPKLPSVPGPLADRLPKLPSVTAPF
Ga0070711_1019180121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSVPGPLADRLPKL
Ga0070708_1009455501	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEH
Ga0070696_1014970351	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLLANQRKF
Ga0066702_110012651	3300005575	Soil	MPSTRTRDLPEEFLAATRKSQEAAIRAIKTWVETVRSVAPKLPVYAPLADRLPRLPSVTVPFADKLPKPE
Ga0068856_1026153681	3300005614	Corn Rhizosphere	MASTPTRDLPEEFLAATRKSQETMIRAIRTWVETVRTVTPKLPTVPGPLADRLPRLPSVTVPFADRLPTPEDVVASGYDFAEQL
Ga0066696_107977431	3300006032	Soil	MPSTRTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPNLPSVYAPLADRLPKLPSVTVPFAD
Ga0075029_1010931511	3300006052	Watersheds	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSVYAPFADRLPKLPSVTDRLPKPEDVVASGYDFA
Ga0070716_1006947071	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MASTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSVPGPLADRLPKLPSVAAPFADRLPTPEDVVASGYDFAEELLAIQRKFA
Ga0075014_1005691162	3300006174	Watersheds	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKMPSVYAPFADRLPKLPSVTDRLPKPEDVVASGYDFA
Ga0079221_111038661	3300006804	Agricultural Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFA
Ga0079220_115301801	3300006806	Agricultural Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLLANQ
Ga0066709_1015212763	3300009137	Grasslands Soil	MPSTRTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVPFADKLPKPE
Ga0066709_1036253601	3300009137	Grasslands Soil	MPSTPRRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVT
Ga0105241_124308461	3300009174	Corn Rhizosphere	MLGKVSGESNQEAYTMASTPTRDLPEEFLAATRKSQETMIRAFRTWVETVRTVTPKLPSVPGPLADRLPKLPSVAAPFADRLPAPEDVVASGYDFAEQ
Ga0116214_11453091	3300009520	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRLPKPEDVVASGYDFAEHLLALQRRFAED
Ga0116221_11571021	3300009523	Peatlands Soil	MASTPTRDLQEEFLAATHKSQETVVRAIKTLAETVRTVTPKLPSVYAPLADRLAKLPSVTDRLLKPEDFVASSYD
Ga0116225_10091921	3300009524	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRLPKPEDVV
Ga0116225_15180661	3300009524	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKAWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRLPKPEDVV
Ga0105237_113159621	3300009545	Corn Rhizosphere	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLL
Ga0116216_103984152	3300009698	Peatlands Soil	VYEEAITMASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSVYAPFADR
Ga0116134_10632362	3300009764	Peatland	VYEEAITMASTPTRDLQDEFLAATRKSQETVVRAIRTWVETVRTVTPKLPSVYAPFADRLPKLPSVTDRLPKPED
Ga0116223_104830712	3300009839	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKAWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRL
Ga0126370_115475282	3300010358	Tropical Forest Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPAVPAPLADRLPRLPSVTVPFADRLPTPEDVVSSGYDFAEQLLA
Ga0136449_1017199781	3300010379	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPYVYAPFADRLPKLPSVTDRLPKPE
Ga0136449_1033870481	3300010379	Peatlands Soil	VYEEAITMASTPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSVYAPLADRLPKLPSVTDRLLK
Ga0136449_1043861541	3300010379	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSVYAPFADRLPKLPSVTDRLPKPEDVVASGYDFAEQLLTLQ
Ga0134121_119342662	3300010401	Terrestrial Soil	MLGIVSSERNQEAYTMASTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPAVPGPLADRLPKLPSVAAPFADRLPAPEDVVASGYD
Ga0137365_103940192	3300012201	Vadose Zone Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVA
Ga0137387_107726791	3300012349	Vadose Zone Soil	MTSTPTRDLPEEFLAATRKSQEAAIRAIKTWVETVRTVTPKLPSVYGPLTDRLPRLPSVTAPFADKLPKPED
Ga0137371_105377701	3300012356	Vadose Zone Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKVPSVYAPLADRLPKLPSVTLPFADRLPKPGDVVARGYDFHDHMLAI
Ga0137371_109995151	3300012356	Vadose Zone Soil	MPSTRTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPNLPSVYAPLADRLPKLPSVTLPF
Ga0134056_12670171	3300012397	Grasslands Soil	TPTRDLPEEFLAATRKSQEAAIRAIKTWVETVRTVTPRLPSVYGPLTDRLPKLPSVTAPSSRPPRR*
Ga0134050_11049811	3300012407	Grasslands Soil	MASTPTRDLPEEFLAATRKSQEAAIRAIKTWVETVRTVTPRLPSVYGPLTDRLPKLPSVTAPSSRPPRR*
Ga0157328_10321831	3300012478	Arabidopsis Rhizosphere	MPSTPTRDLPEEFLAATRKSQEVMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHL
Ga0157370_114548871	3300013104	Corn Rhizosphere	MPSTPTRDLPEEFLAATRKSQEAVIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPE
Ga0132258_115714941	3300015371	Arabidopsis Rhizosphere	MASTPTRDLPEEFLAVTRKSQEAMIRAIKTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVAS
Ga0187879_108331871	3300017946	Peatland	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSGYAPFADRLPKLPSVTDRLPKPEDVVASGYDFAEQ
Ga0187785_104251461	3300017947	Tropical Peatland	MASTPTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPKLPSAYAERLPSLPSVTVPFTDRLPKPEDVVASGYDFAEH
Ga0187817_103167871	3300017955	Freshwater Sediment	MASTPTRDLQDEFLAATRKSQEAVVRAIKTWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRLPKPEDVVASGYDFAE
Ga0187778_102265591	3300017961	Tropical Peatland	MPSIPAQDEFLAATRKGQEAMITTIKTWVETVRTTTPKLASAYAPLTDMLRKVP
Ga0187776_111696321	3300017966	Tropical Peatland	MASNPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTATPKLPEAYVPFADRLPRLPSVTVPFADKLPRPE
Ga0187777_114126071	3300017974	Tropical Peatland	MASTPTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPKLPDAYVPFADRLPKLPSVTVPFADKLPKPED
Ga0187823_101370581	3300017993	Freshwater Sediment	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVAS
Ga0187883_101573962	3300018037	Peatland	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSGYAPFADRLPKLPSVTDRLPKPEDVVASGYDFAEQLLTLQR
Ga0187765_105114401	3300018060	Tropical Peatland	MASTPTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTITPKVPSAYADRLPSLPSVTVPFADRLPKPEDVVASGYDFAEHLLAIQRK
Ga0066655_107067551	3300018431	Grasslands Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSVYTPLADRLPKLPSVTVPFADRLPKPEDVV
Ga0066669_116893381	3300018482	Grasslands Soil	MPSTRTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPNLPSVYAPLADRLPKLPSVT
Ga0179590_11674661	3300020140	Vadose Zone Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSVYAPLADRLPKLPSVTVPFADRLPKAEEVVANGYD
Ga0210407_109524232	3300020579	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFV
Ga0210403_110886551	3300020580	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPS
Ga0210399_109171222	3300020581	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIRTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVP
Ga0210395_105323322	3300020582	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLTSVTVPFADRLPKPEDVV
Ga0210404_105168941	3300021088	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPF
Ga0210405_101265901	3300021171	Soil	MASSPTRDLQDEFLAVTRKSQETVVRAIKTWVETVRTVTPKLPSAYVPLADRLPKLLP
Ga0210396_113762331	3300021180	Soil	MASTPTRDMQEEFLAATRKSQETVVRAIKTWVEAVKTVTPKMPSVYAPLADRLPKLPSVNVPFADRLPKPEDVVASG
Ga0213876_106671381	3300021384	Plant Roots	MARTSTRDLQEEFLAATRTGQDAMIRAIRTWAETVRTITPKLPSPLAGRLPGLAAVTVPFADKLPAP
Ga0210397_114097991	3300021403	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHL
Ga0210389_105096352	3300021404	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLLA
Ga0210389_105588701	3300021404	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPKLPSAYTPLADRLPKLPSVTVPFADRL
Ga0210387_109018241	3300021405	Soil	MASSPTRDLQDEFLAVTRKSQETVVRAIKTWVETVKTVTPKLPSAYVPLADRLPKLLPSV
Ga0228598_10655981	3300024227	Rhizosphere	MASTPTRDMQEEFLAATRKSQETVVRAIKTWVETVKTVTPKMPSVYAPLADRLPKLPSVNVPFADRLPKPEDVVASGYDFAEHL
Ga0207699_112103141	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MASTPTRDLPEEFLAATRKSQETMIRAFRTWVETVRTVTPKLPSVPGPLADRLPKLPSVTAPFADRLPTPEDV
Ga0207649_110115411	3300025920	Corn Rhizosphere	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYD
Ga0207664_117703931	3300025929	Agricultural Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSVPGPLADRLPKLPSVTAPFAD
Ga0209239_13064341	3300026310	Grasslands Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYVPLADRLPKLPSVTVPFADRLPKPEDVVASGYD
Ga0209801_13212951	3300026326	Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVRTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDIV
Ga0209326_10047941	3300026899	Forest Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPED
Ga0208324_11755901	3300027604	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKMPSVYAPFADRLPKLPSVTDRLPKPEDVVASGYDFAEHLLA
Ga0209073_105212871	3300027765	Agricultural Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYAPLADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLLANQ
Ga0209169_101997342	3300027879	Soil	MASNVTQDIQEQILSTIRKSQELTIDALKTWVETVKTVTPDMSSVYAPLADRLPRLPSVTIPFTDRLPKPEEVV
Ga0265760_100347271	3300031090	Soil	MASTPTRDMQEEFLAATRKSQETVVRAIKTWVETVKTVTPKMPSAYAPLADRLPKL
Ga0265760_103666361	3300031090	Soil	MASTPTRDLQEEFLAATRKSQETVVRAIKTWVETVKTVTPKMPSAYAPLADRLPKL
Ga0318534_105792911	3300031544	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRLPKPEDVVASGYDF
Ga0318561_103018581	3300031679	Soil	MASTPTRDLPEEFLAVTRKSQEAMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRL
Ga0318572_108443281	3300031681	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSV
Ga0318572_109401141	3300031681	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKTWVETVRTVTPKLPSAYTPLTDRLPKLPSVTVPFADKLPKPEDVVA
Ga0318560_107172061	3300031682	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRLPKPE
Ga0306917_115321531	3300031719	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKVWVETVRTVTPKLPSAYADRLPKLPSVTVPFADRLPKPEDVVASG
Ga0307468_1009165771	3300031740	Hardwood Forest Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYADRLPKLPSVT
Ga0318546_112129631	3300031771	Soil	MASTPTRDLQEEFLAATRKSQETVVRAIKTWVEAVRTVTPKLPSGYVPLADRLPRLSSVTVPFADKLPTPEEIVASGYDFAEHLLALQ
Ga0318565_104653041	3300031799	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKVWVETVRTVTPKLPSAYADRLPKLPSVTVPFADRLPKPEDVVASGYDFAEHLL
Ga0306925_101912642	3300031890	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKVWVETVRTVTPKLPSAYADRLPKLPSVTVPFADRLPKPEDVVASGYDVAEHPLAIQRKF
Ga0318522_104061661	3300031894	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPKLPSVTVPFADRLPKPEDVV
Ga0306923_101301621	3300031910	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRLPKPEDVVA
Ga0306921_120269471	3300031912	Soil	MASTPTRDLPEEFLAVTRKSQEAMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADKLPKPEDF
Ga0310909_104582782	3300031947	Soil	MASTPTRDLPEEFLAVTRKSQEAMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADKLPKPEDFV
Ga0318569_103112961	3300032010	Soil	MASTPTRDLPEEFLAATRKSQEAMIRAIKVWVETVRTVTPKLPSAYADRLPKLPSVTV
Ga0318514_101331751	3300032066	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRLPKPEDVVASGYDFAEHLLAIQRKFAED
Ga0308173_108995441	3300032074	Soil	MASTPTRDLPEEFLAATRKSQEAAIRAIKTWVETVRTVTPKLPSVPGPLADRLPKLPSVTAPFADRLPTPEDVVASGYDFAEQLLAIQRKF
Ga0306924_116172392	3300032076	Soil	MASTPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTVTPKLPSAHVPLADRLPRLPSVTVPFADK
Ga0318577_102093561	3300032091	Soil	MPSTPTRDLPEEFLAATRKSQEVMIRAIKTWVETVRTVTPKLPSAYADRLPSLPSVTVPFADRLPKPEDV
Ga0311301_107522743	3300032160	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKTWVETVRTVTPKIPSVYAPVADRLPKLPSVTDRLPKLPSVTDRLP
Ga0311301_111899652	3300032160	Peatlands Soil	MASTPTRDLQDEFLAATRKSQETVVRAIKAWVETVRTVTPKMPSVYAPLADRLPKLPSVTDRLPKPEDVVA
Ga0307470_107417821	3300032174	Hardwood Forest Soil	MPSTPTRDLPEEFLAATRKSQEAMIRAIRTWVETVKTVTPKLPSAYADRLPKLPSVTV
Ga0335085_100825641	3300032770	Soil	MASTPTRDLPEEFLAATRKSQEAAIRAIKTWVETVRTVTPRLPSVYGPFMDRFPKLPSVTAPFADRLPKPEDVVASSYDFAEHLLAIQRK
Ga0335079_102148741	3300032783	Soil	MASTPTRDLPEEFLAATRKSQEAAIRAIKAWVETVRTVTPRLPSVYGPFADRFPKLPSVTAPL
Ga0335079_115187251	3300032783	Soil	MASTPTRDLPEEFLAATRKSQEAALRAIKTWVETVRTVTPKLPSVYGPITDRLPKLPSVG
Ga0335078_104278231	3300032805	Soil	MASTPTRDLPEEFLAVTRKSQETMIRAIKTWVETVRTITPKVPSAYADRLPSLPSVTVPFADRLPKPEDVVASGYDFAEHLLAIQRK
Ga0335080_122737741	3300032828	Soil	MASTPTRDLPEEFLAVTRKSQEAMIRAIKTWVETVRAVTPKLPSAYAERLPSLPSVTVPFADKLPKPE
Ga0335081_118690731	3300032892	Soil	MASTPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTVTPKLPPGYMPMADRLPRLPSVT
Ga0335077_104484583	3300033158	Soil	MASNPTRDLQEEFLAATRKSQETVVRAIKTWVETVRTVTPKLPDVYVPFAGRLPKLPSVTVPFTDRLPKPEDVVASSYGFAEDLLAIQRKFAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences