Metagenome / Metatranscriptome Family F090762

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090762
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	78 residues
Representative Sequence	NRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE
Number of Associated Samples	94
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	97.22 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (88.889 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (9.259 % of family members)
Environment Ontology (ENVO)	Unclassified (20.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00108	Thiolase_N	18.52
PF14833	NAD_binding_11	2.78
PF01436	NHL	1.85
PF02954	HTH_8	1.85
PF02803	Thiolase_C	1.85
PF13468	Glyoxalase_3	1.85
PF05960	DUF885	1.85
PF00072	Response_reg	0.93
PF02627	CMD	0.93
PF00190	Cupin_1	0.93
PF01979	Amidohydro_1	0.93
PF00174	Oxidored_molyb	0.93
PF07681	DoxX	0.93
PF13594	Obsolete Pfam Family	0.93
PF12728	HTH_17	0.93
PF06808	DctM	0.93
PF08450	SGL	0.93
PF13517	FG-GAP_3	0.93
PF00248	Aldo_ket_red	0.93
PF03328	HpcH_HpaI	0.93
PF02321	OEP	0.93
PF02518	HATPase_c	0.93
PF13531	SBP_bac_11	0.93
PF08240	ADH_N	0.93
PF12697	Abhydrolase_6	0.93
PF01070	FMN_dh	0.93
PF03080	Neprosin	0.93
PF06240	COXG	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	20.37
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.85
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.85
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.93
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.93
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.93
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.93
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.93
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.93
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.93
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.93
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.93
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.93
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.89 %
Unclassified	root	N/A	8.33 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.15 %
Unclassified	root	N/A	8.33 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.78 %
Unclassified	root	N/A	8.33 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	2.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
Sphaeropleales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
Selenastraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
Monoraphidium	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae → Monoraphidium	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.78 %
Unclassified	root	N/A	8.33 %
Monoraphidium neglectum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae → Monoraphidium → Monoraphidium neglectum	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10470055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300004091\|Ga0062387_101671332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300004463\|Ga0063356_100558186	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300005172\|Ga0066683_10032968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2995	Open in IMG/M
3300005329\|Ga0070683_100730659	Not Available	948	Open in IMG/M
3300005332\|Ga0066388_102023717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300005332\|Ga0066388_104665231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005332\|Ga0066388_108142630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005344\|Ga0070661_100419586	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae → Monoraphidium → Monoraphidium neglectum	1060	Open in IMG/M
3300005344\|Ga0070661_101773741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005439\|Ga0070711_101208293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005440\|Ga0070705_100993445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300005444\|Ga0070694_101288611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005446\|Ga0066686_10464825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005555\|Ga0066692_10069641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2013	Open in IMG/M
3300005556\|Ga0066707_10925973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005610\|Ga0070763_10574367	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300005614\|Ga0068856_100856896	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005842\|Ga0068858_100133879	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300006034\|Ga0066656_11132722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006041\|Ga0075023_100630641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300006046\|Ga0066652_100919561	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300006047\|Ga0075024_100181659	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300006052\|Ga0075029_100548188	Not Available	768	Open in IMG/M
3300006059\|Ga0075017_100667467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300006173\|Ga0070716_101689040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300006796\|Ga0066665_10045196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2998	Open in IMG/M
3300006796\|Ga0066665_10089445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2234	Open in IMG/M
3300006847\|Ga0075431_100874325	Not Available	869	Open in IMG/M
3300006854\|Ga0075425_102942295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300007076\|Ga0075435_101994352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009012\|Ga0066710_100024095	All Organisms → cellular organisms → Bacteria → Proteobacteria	6868	Open in IMG/M
3300009012\|Ga0066710_104745689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009029\|Ga0066793_10250743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300009638\|Ga0116113_1211933	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300009672\|Ga0116215_1290188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300010140\|Ga0127456_1206105	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300010304\|Ga0134088_10606358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300010359\|Ga0126376_13274336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010361\|Ga0126378_12445366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300010391\|Ga0136847_11628490	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300010400\|Ga0134122_12502894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300011120\|Ga0150983_14952276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012096\|Ga0137389_10921187	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012189\|Ga0137388_10669780	All Organisms → cellular organisms → Bacteria → Acidobacteria	964	Open in IMG/M
3300012199\|Ga0137383_11193254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012205\|Ga0137362_11339900	Not Available	601	Open in IMG/M
3300012357\|Ga0137384_10976886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012898\|Ga0157293_10217928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012917\|Ga0137395_10134826	Not Available	1677	Open in IMG/M
3300012927\|Ga0137416_10739894	Not Available	866	Open in IMG/M
3300012930\|Ga0137407_12083697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012976\|Ga0134076_10164490	Not Available	915	Open in IMG/M
3300013297\|Ga0157378_11619303	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300014165\|Ga0181523_10127973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300014201\|Ga0181537_11212156	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300014501\|Ga0182024_12006420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300014969\|Ga0157376_10497635	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae → Monoraphidium → Monoraphidium neglectum	1197	Open in IMG/M
3300015241\|Ga0137418_10870823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300015241\|Ga0137418_11087299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300015359\|Ga0134085_10062665	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300017654\|Ga0134069_1309016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300017657\|Ga0134074_1325599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300017927\|Ga0187824_10148309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300017973\|Ga0187780_11411153	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300018031\|Ga0184634_10076116	All Organisms → cellular organisms → Bacteria → Acidobacteria	1435	Open in IMG/M
3300018042\|Ga0187871_10167064	All Organisms → cellular organisms → Bacteria → Acidobacteria	1238	Open in IMG/M
3300018042\|Ga0187871_10744443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300018468\|Ga0066662_11859163	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300018482\|Ga0066669_10222376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300018482\|Ga0066669_11379895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300021088\|Ga0210404_10865157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021168\|Ga0210406_10157872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1901	Open in IMG/M
3300021170\|Ga0210400_10665000	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300021171\|Ga0210405_10706697	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300021171\|Ga0210405_11113909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300021479\|Ga0210410_11240830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300025311\|Ga0209343_10474208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300025899\|Ga0207642_10869253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300025937\|Ga0207669_10232594	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Selenastraceae → Monoraphidium → Monoraphidium neglectum	1361	Open in IMG/M
3300026078\|Ga0207702_11674057	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300026296\|Ga0209235_1196757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300026341\|Ga0257151_1007850	Not Available	1106	Open in IMG/M
3300026342\|Ga0209057_1213977	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300026538\|Ga0209056_10110574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2211	Open in IMG/M
3300027651\|Ga0209217_1218527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300028047\|Ga0209526_10537093	Not Available	757	Open in IMG/M
3300029952\|Ga0311346_10866658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300030399\|Ga0311353_10394337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1247	Open in IMG/M
3300031057\|Ga0170834_109439335	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300031234\|Ga0302325_13210007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031234\|Ga0302325_13418760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031235\|Ga0265330_10083065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1379	Open in IMG/M
3300031236\|Ga0302324_102419095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300031240\|Ga0265320_10437704	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300031249\|Ga0265339_10362653	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300031715\|Ga0307476_11234728	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300031720\|Ga0307469_10384020	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300031720\|Ga0307469_11531576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031754\|Ga0307475_10654516	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031754\|Ga0307475_11262940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031823\|Ga0307478_10379388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300031962\|Ga0307479_10193877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2000	Open in IMG/M
3300031962\|Ga0307479_10546096	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300032160\|Ga0311301_11927650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300032180\|Ga0307471_101026972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300032180\|Ga0307471_101056285	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300032892\|Ga0335081_10317998	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.19%
Host-Associated	Host-Associated	14.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.22%
Plants	Host-Associated → Plants	14.81%
Aquatic	Environmental → Aquatic	12.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.19%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Sediment	Environmental → Aquatic → Sediment	4.63%
Peat	Environmental → Terrestrial → Peat	4.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.85%
Loam	Environmental → Terrestrial → Soil → Loam	12.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.70%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104700551	3300001661	Forest Soil	TPVVYIMNRRTLEVLGSFVTGASQEHPPGHQIAADHKGNVYVVQAELTGADGASGGTGAYKFVFKGYSPVTKCCQGGGVHAVE*
Ga0062387_1016713322	3300004091	Bog Forest Soil	LEVLGSFNIGTPQGDPPGHLIAADHKGNIYAVQAELSGADGHSGGAGAYKFTFKGYGPKTTCPPCASTKRTE*
Ga0063356_1005581863	3300004463	Arabidopsis Thaliana Rhizosphere	SPDQRFLYLGGTPVVYILNRRTLEVLGTFDVGEGSQDHPPGHQIAADHKGNVYVVQAELAGADGKSGGTGAYKWVFKGYSPTTKCCQGRGRTATN*
Ga0066683_100329686	3300005172	Soil	DIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE*
Ga0070683_1007306591	3300005329	Corn Rhizosphere	VIYILNRKTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKSGGTGAYKWIFKGYSPATQCCSGPGVRAAN*
Ga0066388_1020237171	3300005332	Tropical Forest Soil	LNRRTLEVLGSFVTGSPQGDSPGHLMGTDTNGNVYVVQAELTGADGKSGGTGAYKFTFKGYSAAVKCPPCEPVR*
Ga0066388_1046652312	3300005332	Tropical Forest Soil	DPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKRVE*
Ga0066388_1081426301	3300005332	Tropical Forest Soil	ADQRFLYVAGTPVVYILNRQTLEVLGSFVTGSAQDHPPGHQIAADHKGNVYVVQAELTGADGSSGGTGAYKFTFKGYSPLTKCCQGWD*
Ga0070661_1004195862	3300005344	Corn Rhizosphere	TPVIYILNRKTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKSGGTGAYKWIFKGYSPETQCCSGPGVRAAN*
Ga0070661_1017737411	3300005344	Corn Rhizosphere	TPVIYILNRKTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKRGGTGAYK*
Ga0070711_1012082932	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PDVYVLNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYAPKVSCPPCDSTKRTE*
Ga0070705_1009934452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EVLGSFSTGEGSQDHPPGHQIAADHRGNVYAVQAELTGADGKSGGAGAYKFVFKGYSPVTKCCQGTGVHATN*
Ga0070694_1012886111	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VLGTFDVGEGSQDHPPGHQIAADHKGNVYVVQAELTGADGKSGGTRAYKWVFKGYSAPTKCCQGRGRTATN*
Ga0066686_104648251	3300005446	Soil	NRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRVE*
Ga0066692_100696413	3300005555	Soil	GSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE*
Ga0066707_109259732	3300005556	Soil	DIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRTE*
Ga0070763_105743672	3300005610	Soil	LNRKTLEVLGSFTTGSPQTDPPGHLIGADHKGNVYAVQAELAGADGKSGGAGAYKFLFKGYSPVTTCPPCEPTRSAPE*
Ga0068856_1008568962	3300005614	Corn Rhizosphere	GTPVVYILNRKTLEVLGSFITGASQEHPPGHQIAADHKGNVYVVQAELTGADGASGGTGAYKFVFKGYSPATKCCKGVEVPD*
Ga0068858_1001338791	3300005842	Switchgrass Rhizosphere	PVVYILNRKTLEVLGSFNVGEGSQEHPPGHQIGSDNKGNVYVVQAELTGADGRSGGTGAYKWVFKGYAPATRCCQGAGVKSSSQP*
Ga0066656_111327221	3300006034	Soil	GGTPVVYILNRRTLEVLGAFNTGEGSQEHPPGHQIGADHKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSPAIKCCQGGGTHATQ*
Ga0075023_1006306412	3300006041	Watersheds	LNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYAPKVSCPPCASTKRAQ*
Ga0066652_1009195613	3300006046	Soil	YILNRKTLEVLGSFSTGEGSQDHPPGHQIAADHRGNVYAVQAELTGADGKSGGAGAYKFVFKGYSPVTKCCH*
Ga0075024_1001816592	3300006047	Watersheds	FSPDQRFLYLGGTPVVYILNRRTLEVLGQFKTGEGDQSHPPGHQIGADNKGNVYVVQAELTGAEGHDGQTGGTGAYKWVLKGFSPATRCCNGDGAVHAIE*
Ga0075029_1005481881	3300006052	Watersheds	VLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYTPKVSCPPCASTKREQ*
Ga0075017_1006674672	3300006059	Watersheds	FILNRRTLEVLGSFNIGTPQGDPPGHLIAADHKGNIYAVQAELSGADGHSRGAGAYKFTFKGYGPKATCPPCASTKRTE*
Ga0070716_1016890402	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYAPKVSCPPCDSTKRTE*
Ga0066665_100451966	3300006796	Soil	PDIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE*
Ga0066665_100894451	3300006796	Soil	LGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE*
Ga0075431_1008743252	3300006847	Populus Rhizosphere	VYILNRKTLEVLGSFVNGSAQDHPPGHQIAADHKGSVYAVQAQLSGADGSSGGTGAYRFAFKGYSPVTRCCQGVGARATN*
Ga0075425_1029422951	3300006854	Populus Rhizosphere	TPVVYILNRKTLEVLGSFNVGEGQQDHPPGHQIAADHKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSPVIKNP*
Ga0075435_1019943521	3300007076	Populus Rhizosphere	GTPAIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKASN*
Ga0066710_1000240951	3300009012	Grasslands Soil	NIGSPQGDPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKRIE
Ga0066710_1047456892	3300009012	Grasslands Soil	VIYILNRKTLEVLGSFSTGEGSQDHPPGHQIAADHRGNVYAVQAELTGADGKSGGAGAYKFLFKGYSPVTKCCH
Ga0066793_102507433	3300009029	Prmafrost Soil	LEVLGSFDVGEGAQDLSPGHEITADHKGTLYVVQAELTGADGKSGGTGAYKWVFTGYSPATKCCQGTGLRAAN*
Ga0116113_12119331	3300009638	Peatland	TYILNRKTLEVLGSFDIGAAQAHPPGHQIASDHKGNIYEVQAELTGPDGKTPASGAYKFVLKGYTPRTTCPPCESTRSAIE*
Ga0116215_12901881	3300009672	Peatlands Soil	VYVLNRRTLEILGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFAFKGYAPKVSCPPCVSTKRVQ*
Ga0127456_12061051	3300010140	Grasslands Soil	GAPDIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRVE*
Ga0134088_106063581	3300010304	Grasslands Soil	DIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSSKVSCPPCVSTRRTE*
Ga0126376_132743361	3300010359	Tropical Forest Soil	GSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFIFKGFTPKVSCPPCASTKRAE*
Ga0126378_124453662	3300010361	Tropical Forest Soil	RKTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGRSGGAGAYKFTFKGFTPRASCPPCVSTKRTE*
Ga0136847_116284902	3300010391	Freshwater Sediment	VIYILNRKTLEVLGSFNVGEGSQEHPPGHQIAADHKGNVYVVQAELTGADGKSGGAGAYKWVFKGYSPVTKCCQSTRSVFP*
Ga0134122_125028941	3300010400	Terrestrial Soil	TPVVYILNRRTLEVLGSFVSGAAQEHPPGHQIAADHKGNVYIVQAELTGADGKAGGTGAYRFLFKGYSPSMKCCQGGGVRATN*
Ga0150983_149522762	3300011120	Forest Soil	TPVVYILNRKTLEVLGSFVSGTSQEHPPGHQIAADHKGNIYVVQAELTGADGASGGTGAYKFVFKGYSPAIKCCQGGGVQASN*
Ga0137389_109211873	3300012096	Vadose Zone Soil	TPVVYILNRKTLEVLGSFVTGSAQDHPPGHQIAADHKGNIYVVQAELAGADGSSGGTGAYKFVLKGYSPVTQCCQGVGVHAIN*
Ga0137388_106697803	3300012189	Vadose Zone Soil	PDPQQKFLYAGGTPVIYILNRRTLEVLGSFVTGTSAAHPPGHQIAADHKGNVYAVQADPPAADGTTSGPGMYHFVFKGFPPVNVCCQ*
Ga0137383_111932542	3300012199	Vadose Zone Soil	TLEVLGLFNIGSPQGDPPGHLINVDYEGNVYAVQAELSGADGHSGGAGAYKFTLKGFSPKVSCPPCESTRRTE*
Ga0137362_113399002	3300012205	Vadose Zone Soil	FNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFMGFSPKVSCPPCESTKRSE*
Ga0137384_109768861	3300012357	Vadose Zone Soil	PDPAQRFLYVSGSPDIYILNRRTLEVLGLFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTLKGFSPKVSCPPCESTRRTE*
Ga0157293_102179281	3300012898	Soil	TLEVLGTFDVGEGSQDHPPGHQIAADHKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSAPTKCCQGRGRTATN*
Ga0137395_101348261	3300012917	Vadose Zone Soil	SPDPAQRFLYVSGSPDIYILNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVFAVQAELSGADGHSGGAGAYKFTFKGFSAKVPCPPCESTKRTE*
Ga0137416_107398942	3300012927	Vadose Zone Soil	SFNIGSPQGDPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKRIE*
Ga0137407_120836972	3300012930	Vadose Zone Soil	EVLGSFVSGAAQEHPPGHQIAADHKGNVYIVQAELTGADGKAGGTGAYRFLFKGYSPAMKCCQGGGVRATK*
Ga0134076_101644901	3300012976	Grasslands Soil	LEVLGAFNTGEGSQEHPPGHQIGADHKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSPAIKCCQGGGTHATQ*
Ga0157378_116193031	3300013297	Miscanthus Rhizosphere	ILNRKTLEVLGSFITGASQEHPPGHQIAADHKGNVYVVQAELTGADGASGGTGAYKFVFKGYSPATKCCKGVEVPD*
Ga0181523_101279732	3300014165	Bog	VTYILNRKTLEVLGSFDIGAAQTHPPGHQIAADHKGNIYEVQAELTGPDGKTPASGAYKFVFKGYSPRTTCPPCESTRSAIE*
Ga0181537_112121561	3300014201	Bog	LNRKTLEVLGTFTTGAAQAHPPGHQIAADHRGNIYEVQAELTGADGKSGGAGAFKFLFKGYSPRVTCPPCQPVRSAAK*
Ga0182024_120064202	3300014501	Permafrost	PDPAQRFLYVSGAPIVYIVNRRTLEVLGSFTIGTPQGDPPGHLIDVDHKGDVYAVQAELSGPEGHGGAGAQKFTFKGYSPAVSCPPCATTKPTE*
Ga0157376_104976351	3300014969	Miscanthus Rhizosphere	ILNRKTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKSGGTGAYKWIFKGYSPATQCCSGPGVRAAY*
Ga0137418_108708231	3300015241	Vadose Zone Soil	VYVLNRKSLEIFGSFDVGSAQAHPPGYQLAADHGGNLYLVQTELTGADGRSGGTGAYKFLFKGYTPTTTCPPCQSSRVMPE*
Ga0137418_110872992	3300015241	Vadose Zone Soil	IYILNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGFSPKVSCPPCESTKRTEESK*
Ga0134085_100626651	3300015359	Grasslands Soil	NRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE*
Ga0134069_13090162	3300017654	Grasslands Soil	DIYILNRKTLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE
Ga0134074_13255991	3300017657	Grasslands Soil	TLEVLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE
Ga0187824_101483092	3300017927	Freshwater Sediment	RTLEVLGSFNIGTPQGDPPGHLIAADHKGNIYAVQAELSGADGHSGGAGAYKFTFKGYGPKVSCPPCVSAKRSE
Ga0187780_114111531	3300017973	Tropical Peatland	NRRTLEVLGSFDIGSEQEHPPGHQIAADHKGNVYAVQAELTGADGKSGGAGAYKFLFKGYSPVTPCCQSTRSAFQ
Ga0184634_100761162	3300018031	Groundwater Sediment	LNRKTLEILGSFRTGEGDQAHPPGHQIGSDSKGNVYVVQAELTGAEGLDGQTGGTGAYKFVFKGYSPATTCCQGR
Ga0187871_101670642	3300018042	Peatland	VTYILNRKTLEVLGSFDIGAAQAHPPGHQIASDHKGNIYEVQAELTGPDGKTPASGAYKFVFKGYSPRTTCPPCESTRSAIE
Ga0187871_107444432	3300018042	Peatland	GSPDIYVLNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKSYAPKISCPPCESTKRAQ
Ga0066662_118591631	3300018468	Grasslands Soil	TPVVYILNRRTLEVLGAFNTGEGSQEHPPGHQIGADHKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSPAIKCCQGGGVHATH
Ga0066669_102223761	3300018482	Grasslands Soil	VAGSPDIYILNRKTLEVLGSFNIGSPQGDPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRLR
Ga0066669_113798952	3300018482	Grasslands Soil	EVLGAFNTGEGSQDHPPGHQIGADRKGNVYVVQAELTGADGKSGGTGAYKWVFKGYSPAIKCCQGGGTHATR
Ga0210404_108651571	3300021088	Soil	LNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYTPKVSCPPCASTKREQ
Ga0210406_101578721	3300021168	Soil	VLGSFKIGSPQGDPPGHLIAADHKGNIYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKNID
Ga0210400_106650002	3300021170	Soil	GSFDIGASQAHPPGHQIAADHKGNIYEVQADLTGADGKSGGAGAYKFVFKGYSPRNPCPPCQSTRNVFE
Ga0210405_107066971	3300021171	Soil	GTPVTYVLNRKTLEVLGSFDIGTSQAHPPGHQIATDHKGNIYEVQADLTGADGKSGGAGAYKFVFKGYAPRSTCPPCQSARNVFE
Ga0210405_111139091	3300021171	Soil	VIYILNRKTLEVLGSFTTGSPQADPPGHLIAADHKGNVYAVQAELAGADGKSGGAGAYKFVFKGYSPVTACPPCQSTRSASE
Ga0210410_112408301	3300021479	Soil	DVYILNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGFSPKVSCPPCESTKRTE
Ga0209343_104742082	3300025311	Groundwater	RKTLEVLGSFRTGEGDQSHPPGHQIGTDNKGNVYVVQAELTGAEGRDGQTGGAGAYKWVFKGYSPATKCCNGDGAVHATSR
Ga0207642_108692531	3300025899	Miscanthus Rhizosphere	LYLGGPPIVYKKNRRTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKSGGTGAYKWIFKGYSPATQCCSGPGVRAAN
Ga0207669_102325942	3300025937	Miscanthus Rhizosphere	YILNRKTLEVLGTFDVGEGAQDHPPGHQITADHKGNVYVVQAELTGADGKSGGTGAYKWIFKGYSPATQCCSGPGVRAAY
Ga0207702_116740571	3300026078	Corn Rhizosphere	GTPVVYILNRKTLEVLGSFITGASQEHPPGHQIAADHKGNVYVVQAELTGADGASGGTGAYKFVFKGYSPATKCCKGVEVPD
Ga0209235_11967571	3300026296	Grasslands Soil	ILNRKTLELLGSFNIGSPQGDPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKRIE
Ga0257151_10078501	3300026341	Soil	LEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGFSPKISCPPCESTKRTEESK
Ga0209057_12139771	3300026342	Soil	LGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRLR
Ga0209056_101105741	3300026538	Soil	VLGSFNIGSPQGDPPGHLIAVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTRRIE
Ga0209217_12185271	3300027651	Forest Soil	LGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGFAPKVSCPPCESTKRAQ
Ga0209526_105370932	3300028047	Forest Soil	SFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPRVSCPPCESTKRAQ
Ga0311346_108666581	3300029952	Bog	AGTPVVYILNRKTLEVLGSFAIGSAQEHPPGHQMAADHKGNIYLVQAELTGADGASGGTGAYKFVFKGYSPVTKCCQGYGVGLVPSADVKPTNE
Ga0311353_103943373	3300030399	Palsa	KTLEVLGSFVVGSAQEHPPGHQIAADHKGNIYVVQAELTGADGSSGGTGAYKFVFKGYSPATKCCQEVGVRATN
Ga0170834_1094393352	3300031057	Forest Soil	VLGSFVVGASQLHTPGHQIAADHKGNVYATQAELTGADGSSGSAGVYKFVFKGHSPVTRCCQGVGLHAN
Ga0302325_132100071	3300031234	Palsa	VGGTPVVYILNRRTLEVLGSFVTGTSQEHPPGHQIAADHKGNVYVVQAELAGADGSSGGTGAYKFAFKAYSPATKCCQGEGVHAVN
Ga0302325_134187601	3300031234	Palsa	KRKTLEVLGSFLVGSAQDHPPGHQIAADGKGNVYVVQAELAGADGSSGGTGAYKFAFMGYSPVTKCCQGEGVRAVN
Ga0265330_100830651	3300031235	Rhizosphere	LYVGGTPVTYFLNRRTLEVLGSFDIGAAQAHPPGHQIATDHKGNIYEVQAELVGADGKSGGAGAFKFLFKGYTPRVTCPPCQTTKSMP
Ga0302324_1024190951	3300031236	Palsa	ILNRKTLEVLGSFDVGEGAQDHPPGHQIAADHKGNIYVVQAELTGADGKSGGAGAYKWVFKGFSAATKCCEGMRAP
Ga0265320_104377042	3300031240	Rhizosphere	NRKTLEVLGSFDIGAAQAHPPGHQIAADHKGNIYEVQAELTGPDGKTPASGAYKFAFKGYSPRTTCPPCESTRGTAE
Ga0265339_103626532	3300031249	Rhizosphere	TYILNRKTLEVLGSFDIGAAQAHPPGHQIAADHKGNIYEVQAELTGPDGKTPASGAYKFAFKGYSPRTTCPPCESTRGTAE
Ga0307476_112347281	3300031715	Hardwood Forest Soil	VAGTPVTYILNRKTLEVLGSFDVGSSQRHPPGHQIAADHKGNVYEVQAELTGADGKSGGTGAYKFVFKGYSPTTSCPPSCQSVGRSSNN
Ga0307469_103840201	3300031720	Hardwood Forest Soil	EVLGSFTTGSPQADPPGHLIGADHKGNVYAVQAELAGADGKSGGAGAFKFVFKGYTPVTTCPPCEPTRSAPE
Ga0307469_115315762	3300031720	Hardwood Forest Soil	PAQRFLYVSGSPDIYILNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYAPKVSCPPCASTKRAQ
Ga0307475_106545161	3300031754	Hardwood Forest Soil	EVLGSFVSGASQEHPPGHQIAADHKGNIYVVQAELTGADGASGGTGAYKFVFKGYSPVTKCCQGVGVHAVE
Ga0307475_112629402	3300031754	Hardwood Forest Soil	EILGSFNIGSPQGDPPGHLINVDHEGNIYAVQAELSGADGHSGGAGAYKFTLKGFSPKVSCPPCESTRRIE
Ga0307478_103793882	3300031823	Hardwood Forest Soil	PVTYVLNRKTLEVLGSFDIGTSQAHPPGHQIATDHKGNIYEVQADLTGADGKSGGAGAYKFVFKGYAPRSTCPPCQSARNVFE
Ga0307479_101938771	3300031962	Hardwood Forest Soil	YILNRKTLEVLGTFPTGSPQADPPGHLIAADHKGNVYAVQAELAGADGKSGGAGAYKFVFKGYSPVTTCPPCESTRGTSE
Ga0307479_105460963	3300031962	Hardwood Forest Soil	KTLEVLGSFNIGSPQGDPPGHLITVDHKGNVYAVQAELSGADGHSGGAGAYKFTFKGYSPKVSCPPCVSTKRIE
Ga0311301_119276501	3300032160	Peatlands Soil	LNRRTLEVLGSFNIGSPQGDPPGHLINVDHEGNVYAVQAELSGADGHSGGAGAYKFTFKGYAPKVSCPPCSSTKRAQ
Ga0307471_1010269723	3300032180	Hardwood Forest Soil	VYILNRRTLEVLGQFKTGEGDQSHPPGHQIGADNKGNVYVVQAELTGAEGHDGQTGGTGAYKWVLKGFSPATRCCNGDGAVRAIE
Ga0307471_1010562852	3300032180	Hardwood Forest Soil	LEVLGSFVSGASQEHPSGHQIAADHKGNIYVVQAELTGADGASGGTGAYKFVFKGYSPVTKCCQGVGVHAVE
Ga0335081_103179983	3300032892	Soil	LGSFNIGTPQGDPPGHLIAADHKGNIYAVQAELSGADGHSGGAGAYKFTFKGYGPKTTCPPCSSVRRTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences