Metagenome Family F090725

Basic Information
Family ID	F090725
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	96 residues
Representative Sequence	MKGTARLVWLLVTLMVILLPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGATPLLASHEPRGPPLS
Number of Associated Samples	34
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.37 %
% of genes near scaffold ends (potentially truncated)	53.70 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	32
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (62.037 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (64.815 % of family members)
Environment Ontology (ENVO)	Unclassified (90.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (93.519 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.84% β-sheet: 11.34% Coil/Unstructured: 60.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07690	MFS_1	34.26
PF00072	Response_reg	0.93
PF03795	YCII	0.93
PF07589	PEP-CTERM	0.93
PF07366	SnoaL	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0891606	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300000955\|JGI1027J12803_100457362	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300004633\|Ga0066395_10002423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6466	Open in IMG/M
3300004633\|Ga0066395_10083572	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300004633\|Ga0066395_10803606	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005332\|Ga0066388_100404008	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300005332\|Ga0066388_100749268	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300005332\|Ga0066388_100882200	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300005332\|Ga0066388_105373167	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005332\|Ga0066388_106673310	Not Available	581	Open in IMG/M
3300005332\|Ga0066388_107951331	Not Available	530	Open in IMG/M
3300005332\|Ga0066388_108060782	Not Available	526	Open in IMG/M
3300005439\|Ga0070711_100579122	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005713\|Ga0066905_100378701	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005713\|Ga0066905_101577981	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005713\|Ga0066905_102263904	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005764\|Ga0066903_100722679	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300005764\|Ga0066903_105375438	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005764\|Ga0066903_108024602	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005764\|Ga0066903_108890530	Not Available	509	Open in IMG/M
3300005841\|Ga0068863_100756706	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005983\|Ga0081540_1049237	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300006175\|Ga0070712_100104565	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300006854\|Ga0075425_100086264	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300009177\|Ga0105248_11765814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300009792\|Ga0126374_10014256	All Organisms → cellular organisms → Bacteria	3263	Open in IMG/M
3300009792\|Ga0126374_10135113	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300009792\|Ga0126374_10805048	Not Available	718	Open in IMG/M
3300009792\|Ga0126374_10837704	Not Available	706	Open in IMG/M
3300009792\|Ga0126374_11466162	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010043\|Ga0126380_10035117	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300010043\|Ga0126380_11171332	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010043\|Ga0126380_11428196	Not Available	609	Open in IMG/M
3300010046\|Ga0126384_10114705	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300010046\|Ga0126384_10466644	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300010046\|Ga0126384_10613705	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010046\|Ga0126384_11125813	Not Available	721	Open in IMG/M
3300010047\|Ga0126382_10041944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2611	Open in IMG/M
3300010047\|Ga0126382_10656860	Not Available	872	Open in IMG/M
3300010047\|Ga0126382_11060733	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010047\|Ga0126382_11439856	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010048\|Ga0126373_10103107	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300010048\|Ga0126373_10415311	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300010048\|Ga0126373_12666042	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010048\|Ga0126373_12808922	Not Available	543	Open in IMG/M
3300010048\|Ga0126373_13325665	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010358\|Ga0126370_10222425	Not Available	1443	Open in IMG/M
3300010358\|Ga0126370_10619441	Not Available	937	Open in IMG/M
3300010358\|Ga0126370_11179912	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010358\|Ga0126370_11615563	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300010358\|Ga0126370_12031394	Not Available	562	Open in IMG/M
3300010358\|Ga0126370_12423876	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010358\|Ga0126370_12505238	Not Available	514	Open in IMG/M
3300010359\|Ga0126376_10679757	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300010359\|Ga0126376_10781656	Not Available	929	Open in IMG/M
3300010359\|Ga0126376_13268215	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_10122395	Not Available	2014	Open in IMG/M
3300010360\|Ga0126372_10126254	Not Available	1989	Open in IMG/M
3300010360\|Ga0126372_10193421	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300010360\|Ga0126372_10195970	Not Available	1676	Open in IMG/M
3300010360\|Ga0126372_10333287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1352	Open in IMG/M
3300010360\|Ga0126372_11252013	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010360\|Ga0126372_11351973	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010360\|Ga0126372_11555959	Not Available	699	Open in IMG/M
3300010360\|Ga0126372_13069670	Not Available	518	Open in IMG/M
3300010360\|Ga0126372_13079111	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010361\|Ga0126378_10180722	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300010361\|Ga0126378_10279759	Not Available	1768	Open in IMG/M
3300010361\|Ga0126378_11406886	Not Available	790	Open in IMG/M
3300010361\|Ga0126378_12291108	Not Available	616	Open in IMG/M
3300010362\|Ga0126377_10564297	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300010362\|Ga0126377_12636432	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010362\|Ga0126377_13391352	Not Available	515	Open in IMG/M
3300010366\|Ga0126379_10984450	Not Available	948	Open in IMG/M
3300010366\|Ga0126379_11025170	Not Available	930	Open in IMG/M
3300010366\|Ga0126379_11407286	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010366\|Ga0126379_11726354	Not Available	730	Open in IMG/M
3300010366\|Ga0126379_12795600	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_12892148	Not Available	575	Open in IMG/M
3300010376\|Ga0126381_103849743	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300010376\|Ga0126381_104308450	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010376\|Ga0126381_104912176	Not Available	513	Open in IMG/M
3300010398\|Ga0126383_11336298	Not Available	807	Open in IMG/M
3300010398\|Ga0126383_13484491	Not Available	514	Open in IMG/M
3300012948\|Ga0126375_10502823	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012948\|Ga0126375_10540064	Not Available	878	Open in IMG/M
3300012948\|Ga0126375_10781044	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012948\|Ga0126375_12043691	Not Available	507	Open in IMG/M
3300012971\|Ga0126369_11772272	Not Available	706	Open in IMG/M
3300015373\|Ga0132257_103876141	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300021560\|Ga0126371_10261692	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300021560\|Ga0126371_10462948	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300021560\|Ga0126371_10838225	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300021560\|Ga0126371_10950100	Not Available	1002	Open in IMG/M
3300021560\|Ga0126371_13041360	Not Available	568	Open in IMG/M
3300021560\|Ga0126371_13828020	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027527\|Ga0209684_1003213	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300027527\|Ga0209684_1012234	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300027646\|Ga0209466_1005609	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300027646\|Ga0209466_1035727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300027646\|Ga0209466_1068690	Not Available	715	Open in IMG/M
3300027654\|Ga0209799_1010242	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300027874\|Ga0209465_10052175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1957	Open in IMG/M
3300027874\|Ga0209465_10079923	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300027874\|Ga0209465_10238150	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300027874\|Ga0209465_10639456	Not Available	525	Open in IMG/M
3300027874\|Ga0209465_10693230	Not Available	500	Open in IMG/M
3300031910\|Ga0306923_10011306	All Organisms → cellular organisms → Bacteria	9090	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.37%
Host-Associated	Host-Associated	4.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.37%
Plants	Host-Associated → Plants	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.59%
Loam	Environmental → Terrestrial → Soil → Loam	27.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	64.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	64.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	25.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08916061	2228664022	Soil	MARLVWLLVSVMVVLTPMAWASPIDPXWIGGMYXDRXFDDVVSYLTSGTLAVPVLPTADLSPMFAPVPTEAVRDRQLGANPFLPSNEPRAPPLI
JGI1027J12803_1004573621	3300000955	Soil	AMKGMARLVWLLVSVMVVLTPMAWASPIDPSWIGGMYDDRDFDDVVSYLTSGTLAVPVLPAADLSPVFAPARTEPVRDYQLGASPFLASNEPRAPPLI*
Ga0066395_100024231	3300004633	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRGPPLS*
Ga0066395_100835722	3300004633	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPTDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFAPAPAEHVPAQQLGAAPLISSNEPRAPPHR*
Ga0066395_108036062	3300004633	Tropical Forest Soil	LMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPMSATPLLASHESRAPPLS*
Ga0066388_1004040082	3300005332	Tropical Forest Soil	VEGANGGVGVDTTQDREVRIATTMKGTARLVWLLVTLLVILMPMAWAMPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPATDLSPVFVSAPTEALADQSIGATPLLASHEPRAPPLS
Ga0066388_1007492682	3300005332	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLILGTLAVPPLPPADLSPMFTPAPAEHVPAQQLGAAPLISSNEPRAPPHR*
Ga0066388_1008822002	3300005332	Tropical Forest Soil	MKGTVRLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVIPAADLSPVFASAPTESLADQPIGAFPLLASHKPRAPPLS*
Ga0066388_1053731672	3300005332	Tropical Forest Soil	PMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0066388_1066733102	3300005332	Tropical Forest Soil	ILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAAPLLASHEPRAPPLS*
Ga0066388_1079513311	3300005332	Tropical Forest Soil	RLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQATSVTPLLASHESRAPPLS*
Ga0066388_1080607821	3300005332	Tropical Forest Soil	RQGKRAMGVDTTQDREVWIATTMKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPIEARADQPMSATPLLASHEPRAPPLG*
Ga0070711_1005791222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVVLTPMAWASPVDPSWIGGVYDDRDFDDVVSYLTSGTLAVPALPAADLSPIFVPATTEVVSDQQLGAAPFLASNEPRAPPLS*
Ga0066905_1003787011	3300005713	Tropical Forest Soil	MPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAANLSPVFVSAPTEALADQPISATPLLASHEPRAPPLS*
Ga0066905_1015779811	3300005713	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWTKGIYDDADFDEVVSYLILGTLAVPPLPAADLSPMFAPAPAERVHEQQLGAAPLISSSEPRAPPHR*
Ga0066905_1022639042	3300005713	Tropical Forest Soil	MPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFASAPTEALADQPIGATPVLASHESRAPPLS*
Ga0066903_1007226792	3300005764	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSVPTEALADQRIGAAPLLASHEPRAPPLS*
Ga0066903_1053754382	3300005764	Tropical Forest Soil	MKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS*
Ga0066903_1080246021	3300005764	Tropical Forest Soil	VTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEARADQPMSATPLLASHEPRAPPLS*
Ga0066903_1088905302	3300005764	Tropical Forest Soil	LMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGAPPLLASHEPRGPPLS*
Ga0068863_1007567061	3300005841	Switchgrass Rhizosphere	MKGMARSVWFLVALMVVLTPMAWASPVDPSWIGGVYDDRDFDDVVSYLTSGTLAVPALPAADLSPIFVPATTEVVSDQQLGAAPFLASNEPRAPPLS*
Ga0081540_10492373	3300005983	Tabebuia Heterophylla Rhizosphere	MMKGTVRLVWLLVTLMVILMPMPWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLGGPVLPAADLSPVFVSAPIEALADQPIGATPLLASHEPRAPPLS*
Ga0070712_1001045651	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKGISRSVWFLVALMVVLTPMAWASPVDPSWIGGVYDDRDFDDVVSYLTSGTLAVPALPAADLSPIFVPATTEVVSDQQLGAAPFLASNEPRAPPLS*
Ga0075425_1000862644	3300006854	Populus Rhizosphere	MKGMARSAWLLVTLMIVLTPMAWASPVDPSWIGGVYDEGDFDDVASYLTSGTLAVPACPAADLSPMFAPAPHEAAPDQRLAPAPFQASNGPRAPPPS*
Ga0105248_117658142	3300009177	Switchgrass Rhizosphere	CDRGLKVDTTQAREVRVATAMKGMARSVWFLVALMVVLTPMAWASPVDPSWIGGVYDDRDFDDVVSYLTSGTLAVPALPAADLSPIFVPATTEVVSDQQLGAAPFLASNEPRAPPLS*
Ga0126374_100142563	3300009792	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDVGDFDDVVSYLILGTLAVPPLPPADLSPMFTPAPAEHVPAQQLGAAPLISSNEPRAPPHR*
Ga0126374_101351131	3300009792	Tropical Forest Soil	REVRIATTMKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQRIGAAPLLASHEPRAPPLS*
Ga0126374_108050482	3300009792	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPMSATPLLASHESRAPPLS*
Ga0126374_108377042	3300009792	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRAPPLS*
Ga0126374_114661622	3300009792	Tropical Forest Soil	LMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126380_100351172	3300010043	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFAPAPAERVHEQQFGAAPLISSNEPRAPPHR*
Ga0126380_111713321	3300010043	Tropical Forest Soil	LMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAANLSPVFVSAPTEALADQPIGATPLLASHEPRAPPLS*
Ga0126380_114281961	3300010043	Tropical Forest Soil	WLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSVPTEALADQRIGAAPLLASHEPRAPPLS*
Ga0126384_101147051	3300010046	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTRRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRAPPLS*
Ga0126384_104666442	3300010046	Tropical Forest Soil	MKGTARLVWLLVTLMVILLPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGATPLLASHEPRGPPLS*
Ga0126384_106137052	3300010046	Tropical Forest Soil	LVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPATDLSPVFVSAPTEALADQPVGATPLLASHEPRAPPLS*
Ga0126384_111258131	3300010046	Tropical Forest Soil	MMKGTVRLVWLLVTLLVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLQVPVVPAADLSPVFASAPTEALADQPIGATPLLASHEPRAPPHS*
Ga0126382_100419442	3300010047	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPATDLSPVFVSAPTEALADQPVGATPLLASHEPRAPPLS*
Ga0126382_106568601	3300010047	Tropical Forest Soil	MKVPVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAANLSPVFVSAPTEALADQPISATPLLASHEPRAPPLS*
Ga0126382_110607332	3300010047	Tropical Forest Soil	MPMAWAIPIDPSWIKGVYDAGDFDDVVSYLTSGTLEVPVLPAADLSPVFASAPNEALADQPIGATPLLASHEPRAPPLS*
Ga0126382_114398562	3300010047	Tropical Forest Soil	AWAIPIDPSWIKGVYDAGDFDDVVSYLTSGTLEVPVLPAADLSPVFASAPPEAPADEPIGATPLLASHEPRAPPLS*
Ga0126373_101031073	3300010048	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLILGTLAVPPLPAADLSPMFTPAPAEHVPEQQLGAAPLISSNEPRAPPHR*
Ga0126373_104153112	3300010048	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPTDPSWIKGIYDDGDFDDVVGYLILGTLAVPPFPAADLSPMFAPAPAEHVPEQQLGAAPLISSNEPRAPPHR*
Ga0126373_126660422	3300010048	Tropical Forest Soil	IPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPMSATPLLASHESRAPPLS*
Ga0126373_128089222	3300010048	Tropical Forest Soil	TMKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQRIGAAPLLASHEPRAPPLS*
Ga0126373_133256651	3300010048	Tropical Forest Soil	IPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAPPLLASHEPRGPPLS*
Ga0126370_102224252	3300010358	Tropical Forest Soil	VESNRGVKVDTTQDREVRIAATMRGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPLLPAADLSPVFVSVPTEALADQPIGATPLLASHEPRAPPFS*
Ga0126370_106194412	3300010358	Tropical Forest Soil	VGVDTTQDREVRIATTMKGTVRLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVIPAADLSPVFASAPTEYLADQPIGASPLLASHKPRAPPLS*
Ga0126370_111799122	3300010358	Tropical Forest Soil	MIVLTPMAWASPTDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFAPAPAEHVPAQQLGAAPLISSNEPRAPPHR*
Ga0126370_116155632	3300010358	Tropical Forest Soil	LLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126370_120313942	3300010358	Tropical Forest Soil	ATPMKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS*
Ga0126370_124238762	3300010358	Tropical Forest Soil	VLTPMAWASPTDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFTPASAERVPEQQLGAAPLISSNEPRAPPHR*
Ga0126370_125052381	3300010358	Tropical Forest Soil	MVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLQVPVVPAADLSPVFASAPAEALADQPIGAAPLLA
Ga0126376_106797572	3300010359	Tropical Forest Soil	GTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126376_107816561	3300010359	Tropical Forest Soil	MKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPATDLSPVFVSAPTEALADQPMSATPLLASHESRAPPLS*
Ga0126376_132682151	3300010359	Tropical Forest Soil	LVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPGADLSPVFVSAPTEALADQPIGAAPLLASREPRGPPLS*
Ga0126372_101223955	3300010360	Tropical Forest Soil	VVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPIEARADQPMSATPLLASHEPRAPPLG*
Ga0126372_101262542	3300010360	Tropical Forest Soil	MAVDTTQDREVRIATAMKGTVRLVWLLVTLMVILMPMAWAIPIDPIWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAAHLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS*
Ga0126372_101934212	3300010360	Tropical Forest Soil	VEGANRGVGVDTTQDREVRIATTMRGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVIPAADLSPVFASAPTEGVADQPIGAAPLLASHEPRAPPLS
Ga0126372_101959702	3300010360	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEALADQPISATPLLASHEPRGPPLS*
Ga0126372_103332873	3300010360	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPTDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFTPASAERVPEQQLGAAPLISSNEPRAPPHR*
Ga0126372_112520132	3300010360	Tropical Forest Soil	MKGTVRLVWLLVTLMVILLPMAWAIPVDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVLAPTEAFADQPIGAAPLLASHEPRAPPLS*
Ga0126372_113519732	3300010360	Tropical Forest Soil	TVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQRIGATPLLASHEPRAPPLS*
Ga0126372_115559591	3300010360	Tropical Forest Soil	MKGTARLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQATSVTPLLASHESRAPPLS*
Ga0126372_130696702	3300010360	Tropical Forest Soil	LVWLLVTLMVILLPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVFPATDLSPVFVSAPTEALADQPIGATPLLASHEPRAPPLS*
Ga0126372_130791111	3300010360	Tropical Forest Soil	IPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPLLPAADLSPVFVSVPTEALADQPIGATPLLASHEPRAPPLS*
Ga0126378_101807222	3300010361	Tropical Forest Soil	TQDREVWIATTMKGTVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFAPAPAEHVPAQQLGAAPLISSNEPRAPPHR*
Ga0126378_102797592	3300010361	Tropical Forest Soil	VAVDTTQDREVRIATAMKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPLLPAANLSPVFVSAPTEALADQPIGAAPLLASHEPRG
Ga0126378_114068861	3300010361	Tropical Forest Soil	IATTMRGTVRLVWLLVTLMVILLPMAWAIPIDPSWIKGVYDDGDFDDVVSYLTVVSYLTSGALEVPVVPAADLSPVFASSPTEALADQPMGATPLLASHEPRAPPLS*
Ga0126378_122911082	3300010361	Tropical Forest Soil	MAVDTTQDREVRIATTMKRTVRLVWLLVTLMVILMPMAWAIPIDPIWIKGVYDGGDFDDVVSYLTSGTLEVPLLPAANLSPVFVSAPTEALADQPIGAAPLLASHEPRG
Ga0126377_105642972	3300010362	Tropical Forest Soil	MKGTARLVWLLVSLMVILMPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEIPVLPAADLSPVFVWAPTEALADQPMSATPLLASHESRAPPLS*
Ga0126377_126364322	3300010362	Tropical Forest Soil	VYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126377_133913522	3300010362	Tropical Forest Soil	KGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQRIGVAPLLASHEPRAPPLS*
Ga0126379_109844501	3300010366	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRAPPLS*
Ga0126379_110251702	3300010366	Tropical Forest Soil	VEGANRGVGVDTTQEREVRIATTMKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQRIGVAPLLASHEPRAPPLS
Ga0126379_114072862	3300010366	Tropical Forest Soil	WIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126379_117263541	3300010366	Tropical Forest Soil	MKGTVRLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLQVPVVPAADLSPVFASAPTEALADQPIGATPLLASHEPRAPPLS*
Ga0126379_127956001	3300010366	Tropical Forest Soil	TTQDWEVRIATTMKGTARLVWLLVTLLVILMPMAWAIPVDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPATDLSPVFTSVPTEALADQPIGATPLLASHESRAPPLS*
Ga0126379_128921482	3300010366	Tropical Forest Soil	VRIAATMRGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALVDQPISVTPLLASHESRGPPLS*
Ga0126381_1038497432	3300010376	Tropical Forest Soil	LVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEARADQPMSATPLLASHEPRAPPLS*
Ga0126381_1043084501	3300010376	Tropical Forest Soil	VYDGGDFDDVVSYLTSGTLEVPLLPAANLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS*
Ga0126381_1049121761	3300010376	Tropical Forest Soil	TLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSVPTEALADQRIGAAPLLASHEPRAPPLS*
Ga0126383_113362981	3300010398	Tropical Forest Soil	MKGTARLVWLLVTLLVTLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPAEALADQSMG
Ga0126383_134844911	3300010398	Tropical Forest Soil	MKGTARLVWLLVTLLVILMPMAWAIPVDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPATDLSPVFTSAPTEALADQPMSATPLLASHEPRAPPLS*
Ga0126375_105028232	3300012948	Tropical Forest Soil	ITPGRQVESNRGVEVDTTQDREVRIATTMRGTVRLIWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS*
Ga0126375_105400642	3300012948	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPATDLSPVFVSAPTEALADQAVGATPLLASHEPRAPPLS*
Ga0126375_107810443	3300012948	Tropical Forest Soil	YDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFISAPTEVLADQPIGATPLLASHEPRAPPFS*
Ga0126375_120436912	3300012948	Tropical Forest Soil	MKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPLLPAANLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS*
Ga0126369_117722721	3300012971	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTVRLVWLLVTLMVILLPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRGPPLS*
Ga0132257_1038761411	3300015373	Arabidopsis Rhizosphere	MARLVWLLVALMIVLTPMAWASPIDPSWIGGVYDDRDFDDVVSYLTSGTLAVPALPAADLSPIFAPAAAEVVSDQQPGAAPFLASNEPRAPP
Ga0126371_102616921	3300021560	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPLPAADLSPMFAPAPAEHVPAQQLGAAPLISSNEPRAPPHR
Ga0126371_104629482	3300021560	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPMSATPLLASHESRAPPLS
Ga0126371_108382251	3300021560	Tropical Forest Soil	KGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGATPLLASHEPRAPPLS
Ga0126371_109501002	3300021560	Tropical Forest Soil	MGVDTIQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRGPPLS
Ga0126371_130413602	3300021560	Tropical Forest Soil	LPMAWAIPIDPSWITGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAAPLLASPAPRAPPLG
Ga0126371_138280202	3300021560	Tropical Forest Soil	MKGTVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEALADQPIGAAPLLASHEPRGPPLS
Ga0209684_10032133	3300027527	Tropical Forest Soil	MKGTARLVWLLVTLLVTLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPSADLSPVFVSAPAEALADQSMG
Ga0209684_10122342	3300027527	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFVSAPPEARADQPIGATPLLASHEPRAPPLS
Ga0209466_10056091	3300027646	Tropical Forest Soil	VGVDTTQDREVWIATTMKGPVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPIFASAPTEALADQPIDATPLLASHEPRAPPLS
Ga0209466_10357273	3300027646	Tropical Forest Soil	EWDVRIATTMKGIVRLVWLLVTLMIVLTPMAWASPIDPSWIKGIYDDGDFDDVVSYLILGTLAVPPLPPADLSPMFTPAPAEHVPAQQLGAAPLISSNEPRAPPHR
Ga0209466_10686901	3300027646	Tropical Forest Soil	MKGTARLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPATDLSPVFVSAPTEALADQPVGATPLLASHEPRAPPLS
Ga0209799_10102421	3300027654	Tropical Forest Soil	VGVDTTQDREVWIATTMKGPVRLVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVLPAADLSPVFISAPTEVLADQPIGATPLLASHEPRAPPLS
Ga0209465_100521752	3300027874	Tropical Forest Soil	MGVDTTQDREVWIATTMKGTGRLVWLLVTLMVVLMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGATPLLASHEPRAPPLS
Ga0209465_100799232	3300027874	Tropical Forest Soil	MKGIVRLVWLLVTLMIVLTPMAWASPTDPSWIKGIYDDGDFDDVVSYLTLGTLAVPPFPAADLSPMFAPAPAEHVPEQQLGAAPLISSNEPRAPPHR
Ga0209465_102381501	3300027874	Tropical Forest Soil	MKGTARLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSFLTSGTLEVPVLPAADLSPVFVSAPTEALADQPTSVTPLLASHEPRAPPLS
Ga0209465_106394561	3300027874	Tropical Forest Soil	MKGTVRLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSYLTSGTLEVPVIPAADLSPVFASAPTEYLADQPIGASPLLASHKPRAPPLS
Ga0209465_106932301	3300027874	Tropical Forest Soil	TTMRCTGRVVWLLVTLMVILMPMAWAIPIDPSWIKGVYDGGDFDDVVSYLTSGTLEVPVVPAADLSPVFASAPPEARADQPIGAPPLLASHEPRGPPLS
Ga0306923_1001130615	3300031910	Soil	MGVDTTQDREVWIATMMKGTVRLVWLLVTLMVILLPMAWAIPIDPSWITGVYDGGDFDDVVSFLTSGTLGGPVLPAADLSPVFVSAPTEALADQPIGATPLLASHEPRAPPLS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090725

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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