Metagenome / Metatranscriptome Family F090645

Basic Information
Family ID	F090645
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	55 residues
Representative Sequence	MKLNEHERARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDK
Number of Associated Samples	79
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	32.69 %
% of genes near scaffold ends (potentially truncated)	48.15 %
% of genes from short scaffolds (< 2000 bps)	42.59 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Unclassified (52.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.482 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.704 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 14.12% Coil/Unstructured: 65.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02371	Transposase_20	1.85
PF05163	DinB	1.85
PF12867	DinB_2	1.85
PF00561	Abhydrolase_1	1.85
PF00550	PP-binding	0.93
PF11008	DUF2846	0.93
PF00196	GerE	0.93
PF16757	Fucosidase_C	0.93
PF00199	Catalase	0.93
PF08281	Sigma70_r4_2	0.93
PF12695	Abhydrolase_5	0.93
PF00578	AhpC-TSA	0.93
PF00027	cNMP_binding	0.93
PF13087	AAA_12	0.93
PF12623	Hen1_L	0.93
PF03544	TonB_C	0.93
PF13620	CarboxypepD_reg	0.93
PF01740	STAS	0.93
PF07676	PD40	0.93
PF13358	DDE_3	0.93
PF13450	NAD_binding_8	0.93
PF01255	Prenyltransf	0.93
PF05649	Peptidase_M13_N	0.93
PF07690	MFS_1	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.85
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.93
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.93
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
cellular organisms	root	All Organisms → cellular organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001151\|JGI12713J13577_1002427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1819	Open in IMG/M
3300001471\|JGI12712J15308_10043971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300004080\|Ga0062385_10890139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300004080\|Ga0062385_10926751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005518\|Ga0070699_101815511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005591\|Ga0070761_10922949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005921\|Ga0070766_10714641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300007255\|Ga0099791_10279600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300009089\|Ga0099828_10002583	All Organisms → cellular organisms → Bacteria → Acidobacteria	12496	Open in IMG/M
3300011269\|Ga0137392_10450544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300011269\|Ga0137392_10553003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	956	Open in IMG/M
3300012096\|Ga0137389_11202305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300012096\|Ga0137389_11422984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012189\|Ga0137388_11712421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012189\|Ga0137388_11890561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012205\|Ga0137362_10580612	Not Available	967	Open in IMG/M
3300012361\|Ga0137360_10244150	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300012362\|Ga0137361_11949138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012923\|Ga0137359_10248991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1585	Open in IMG/M
3300014158\|Ga0181521_10162663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300014164\|Ga0181532_10017579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5284	Open in IMG/M
3300020581\|Ga0210399_10676279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300020581\|Ga0210399_11388427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300020582\|Ga0210395_11439429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300020583\|Ga0210401_10325377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1398	Open in IMG/M
3300021088\|Ga0210404_10229488	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300021088\|Ga0210404_10581096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021168\|Ga0210406_10328126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300021168\|Ga0210406_10892286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300021170\|Ga0210400_10098742	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300021178\|Ga0210408_10389142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300021178\|Ga0210408_11043883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300021181\|Ga0210388_10540974	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300021401\|Ga0210393_10164345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1787	Open in IMG/M
3300021401\|Ga0210393_10916922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300021401\|Ga0210393_11677125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300021432\|Ga0210384_10488833	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300022532\|Ga0242655_10224169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300027371\|Ga0209418_1092712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300027625\|Ga0208044_1100507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300027698\|Ga0209446_1045735	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300027846\|Ga0209180_10783565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300027862\|Ga0209701_10003005	All Organisms → cellular organisms → Bacteria → Acidobacteria	10997	Open in IMG/M
3300027862\|Ga0209701_10042702	All Organisms → cellular organisms → Bacteria	2926	Open in IMG/M
3300028047\|Ga0209526_10698247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031715\|Ga0307476_10464076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300031720\|Ga0307469_10417033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300031754\|Ga0307475_10119454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2074	Open in IMG/M
3300031820\|Ga0307473_10546213	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300032035\|Ga0310911_10630945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300032180\|Ga0307471_102781956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300032180\|Ga0307471_103315376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.26%
Aquatic	Environmental → Aquatic	15.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.41%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Sediment	Environmental → Aquatic → Sediment	3.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Peat	Environmental → Terrestrial → Peat	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12713J13577_10024271	3300001151	Forest Soil	MNVNRREQAKPNVAGLTSQVQRAEMKLILAGKWPPLKPLPVFKYGTADYRAEIHFDGTRG
JGI12712J15308_100439711	3300001471	Forest Soil	MKYERAKPNVAGLTSQLQQDEMRLILAGLWPPLKPLPVFKYGADEYRAEIHFDR
Ga0062385_103940853	3300004080	Bog Forest Soil	MKLHEQERAKRNLARAASPDQQAEINLLLAGRWPALKPLPVFKYE
Ga0062385_108901392	3300004080	Bog Forest Soil	MKLNEYERARPNIAGLTFPVQQAEMTLILAGGWPPLKPLPVFKYEADEYRASIEFDKTRGEWVCR
Ga0062385_109267511	3300004080	Bog Forest Soil	MKLNEHERARPNIAGLTSPVQQAEMTLILAGGWPPLKPLPVFKYETDEYRASIEFDKTRGEWVCR
Ga0062384_1001084491	3300004082	Bog Forest Soil	MRSNEHERAEPNVAGLTSPVQQAEMKLLVAGRWPPLKPLPVFKYET
Ga0062388_1007843212	3300004635	Bog Forest Soil	MKLNEHERAGPNVAGLTSAVQQAEIKLLLAGRWPPLKPLPVF
Ga0070699_1018155111	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPCPKCNSTRPNIAGLTSPMQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDK
Ga0070731_108575911	3300005538	Surface Soil	LGLVMKLNKHEHGKPNVAGLTSQVQQAEMKLILAGTWPPLKPLPVFKYGTN
Ga0070761_109229491	3300005591	Soil	MKWNEHERPWLNLAGLSSPVQQAEMKLLLAGRWPPLKPLPVFKYESDEYRASIDFDKLRGEWVC
Ga0070766_107146411	3300005921	Soil	MKLNKHEQAKPNVAGLTSQVQQAEMKLILADMWPPLKPLPVFKYGTDEYRAEIHFDRTR
Ga0075029_1005209693	3300006052	Watersheds	MKLNEQERARPNVAGLASPAQQAEMKLLLAGGWPPLKPLPVFKYET
Ga0075026_1006672792	3300006057	Watersheds	MKLNEYQRAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFKYE
Ga0075017_1008721042	3300006059	Watersheds	MKLNKHEQAKPNIAGLTSQVQQAEMRLILAGAWPALKPLPVFKYETDEYRASIDFD
Ga0070765_1010462781	3300006176	Soil	MDLPSPRPNIAGLTSPVQQAEMSLLLAGRWPPLKPLPVFKYETDEYRASIEFDKT
Ga0073928_109212481	3300006893	Iron-Sulfur Acid Spring	MKWNEHGRARPNLAGLASPVQQAEMKLLLAGRWPPLKPLPIFKYETDEYRASI
Ga0099791_102796001	3300007255	Vadose Zone Soil	MDVPCPKRNSTGPNTAGLTSPVQQAEMKLLLAGKWPPLKPLPVFKYETAEYRASIDFDKTRGEWVCRKTSL
Ga0099828_100025831	3300009089	Vadose Zone Soil	MDVPCPKYNSIRPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDKTRGE
Ga0116221_12948691	3300009523	Peatlands Soil	MKLNEHERARPNIAGLTSPLQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDK
Ga0116106_12689081	3300009645	Peatland	MKMHDHERSRPNLAGLASLVQQAEMKLLLAGRWPPLKPLPVFKYKTHEYRASIDFDKIR
Ga0074044_100792273	3300010343	Bog Forest Soil	MNASQHQQTRPNMAGLASPVQQAEMRLILAGKWPPLKPLPVFKYETGEFRAAIDFDK
Ga0137392_102179091	3300011269	Vadose Zone Soil	MKLNEHKRARPNIAGLTSPVQLAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDKTRG
Ga0137392_104505442	3300011269	Vadose Zone Soil	MKLNKCEQAKPNIAGLTSPVQRAEMKLILAGSWPALKPLPVFKYETDEYRASIDFDKTRGEWVCR
Ga0137392_105530031	3300011269	Vadose Zone Soil	MKLNKHEQAKPNIAGLTSPVQQAEMKLILAGAWPALKPLPVFKYETDEYRASIDFDKTRGEWVCRKTSLA
Ga0137389_112023051	3300012096	Vadose Zone Soil	MKLNKHEQAKPNIAGLTSPVQQAEMKLILAGAWPALKPLPVFKYETDEYRASIDFDKTRGEWVCRKTSL
Ga0137389_114229841	3300012096	Vadose Zone Soil	MKLNKHERARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDECRASIDFDKTRGEWVC
Ga0137388_117124211	3300012189	Vadose Zone Soil	MDVPCPKCNSTRPNIAGLASPVQQAEMKSLLAGRWPPLKPLPVFKYETDEY
Ga0137388_118905611	3300012189	Vadose Zone Soil	MKLNEHERARPNIAGLTSQVQQAEMKLILAGRWPPLKPLPVFKYETDEYRASIDFDKTRGEWVC
Ga0137363_117133631	3300012202	Vadose Zone Soil	MKWNEHEQARPNIAGLTSPVQLGEMKLLLAGRWPPLKPLPVFKYETDAYRATIHF
Ga0137362_105806123	3300012205	Vadose Zone Soil	MKYERAKPNVAGLTSQLQQNEMRLILADLWPPLKPLPVFKYGADEYRAEIHFD
Ga0137362_113976141	3300012205	Vadose Zone Soil	MKLNEHERARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYE
Ga0137360_102441502	3300012361	Vadose Zone Soil	MKLNKHEQAKPNIAGLTSHAQLAEMKLILTGAWPALKPLPGFKYETDEYRASIDFDKTRGEW
Ga0137361_119491382	3300012362	Vadose Zone Soil	MKLNKHEQAKPNIAGLTSHVQQAEMKLILAGAWPALKPLPVFKYETDEYRASIDFDKMRGEWVC
Ga0137359_102489913	3300012923	Vadose Zone Soil	MDVPCPKCINIAGLTSQVQQAEMKLILAGAWPALKPLPVFKYETDEYRASIDFDKTR
Ga0137407_119356722	3300012930	Vadose Zone Soil	MKLNAHERARPNIAGVTSPVQQTDMKLPLAGRWRALKPLPVFKYETAEYRASIDF
Ga0181521_101626633	3300014158	Bog	MKMHDHERSRPNLAGLASLVQQAEMKLLLAGRWPPLKPLPVFKYKTHEYRASIDFDKIRGEWVC
Ga0181532_100175794	3300014164	Bog	MKLHDEERARPNLAGLASPVQQAEMKSLLAGKWPPLKPLPVFKYETHEYRASIDFDKIRGEWVC
Ga0137403_108020341	3300015264	Vadose Zone Soil	MKLNAHERARPNIAGLTSPVQQTEMKLLLAGRWPAL
Ga0181505_111345511	3300016750	Peatland	MKLHDEERARPNLAGLASPVQQAEMKSLLAGKWPPLKPL
Ga0187869_101627051	3300018030	Peatland	MKMHDHERSRPNLAGLASLVQQAEMKLLLAGRWPPLKPLPVFKY
Ga0187869_102839161	3300018030	Peatland	MKLHEHERAKPNIAGRASPVQQAEMKLLLAGRWPPLKPLPVFKY
Ga0210399_106762791	3300020581	Soil	MKLNEHERARPNIAGLTSPVQQAEMKLLMAGRWPPLKPLPVFKYETREYRASIDFDKTRG
Ga0210399_113082231	3300020581	Soil	MKLNEHERPRPNLAGLTSPVQRAEMKLLLAGGWPPLKP
Ga0210399_113440761	3300020581	Soil	MNLHEHERPRSNPAGGVSPEQQAEMKMLLAGGWPPLKPLPVFK
Ga0210399_113884271	3300020581	Soil	MKLNEHERARPNIAGLSSPVQQAEMKLLLAGGWPPLKPLPVFKYETDEYRASIDFDKLRGEW
Ga0210395_112047491	3300020582	Soil	MKLHDHERTRPNLAGLASLVQQAEMKILLAGRWPAL
Ga0210395_114394292	3300020582	Soil	MKLNRHEPAKPNVAGLTSQAQQAELKLILAGKWPPLKPLPVFKYGTDEYRAEIH
Ga0210401_103253773	3300020583	Soil	MKLNEHERPRPNIAGFTSLGQQAEMNLLLAGRWPPLKPLPVFKYETDTYRASIEFDKTRGEWVC
Ga0210401_112091601	3300020583	Soil	MKLNEHERPRPNIAGLSSLAQQAEMKLLLAGRWPPLKPLPVFKFETVDYRFSIDFDKT
Ga0210401_112643241	3300020583	Soil	MKLNEHERARPNPAGLMPSAQQTEMKLLLSGAWPPLRPLPVFKYESPEYRASIEF
Ga0210404_102294882	3300021088	Soil	MDVPCPKSNSTRPNIAGLTSPVQQAELKLLLAGRWPPLKPLPVFKYETDEYRASIDFDKMRGEW
Ga0210404_105810961	3300021088	Soil	MKLNEHERPRPNSAGLTSSVQRAEMNLLLAGRWAPLKPLPVFKYETEEYRASIEFDKTRGEWVCRKTSVPS
Ga0210406_103281261	3300021168	Soil	MKLHEHERARANIAGLTSPVQQAEMKILLAGRWPALKPLPVFKYETDQYRASIDFDKLRGEWV
Ga0210406_108922861	3300021168	Soil	MKYEHAKPNVAGLTSQVQQNEMRLILAGMWPALKPLPVFKYGADEYRAEIHFDRTRGE
Ga0210400_100987421	3300021170	Soil	MKLNKHENVKPNLAGLMSQVQQAEMKLILAGTWPPLKPLPVFKYGAAEYRAEIHFDSTRG
Ga0210405_109250781	3300021171	Soil	MKSRDHEPANPNLAGLTSPVQQAEMKILLAGRWPALKPLPVFKYETAEY
Ga0210408_103891421	3300021178	Soil	MKLNEHVRARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIEFDKTRGEWVCHQTS
Ga0210408_109033362	3300021178	Soil	MKWNEYRRAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFKYETEEYRASIDFD
Ga0210408_110438831	3300021178	Soil	MKYEHAKPNVAGLTSQVQQDEMRLILAGMWPALKPLPVFKYGADEYRAEIHFDRTRGEWV
Ga0210396_109806862	3300021180	Soil	MKLNEHERARPNPAGLMPSAQQTEMKLLLSGAWPPLRPLPVFKYDSPEYRASIEF
Ga0210388_105409742	3300021181	Soil	MDVPSPKSHSTRPNTVGLASPVQQAELKLLLAGRWPPLKPLPVFKYETEEYRASIDF
Ga0210388_105535451	3300021181	Soil	MKWNEHQRTRPNIAGLASPVQQGELRILLAGRWPPLKPLPVFKYETDEYRASIDFD
Ga0210393_101643453	3300021401	Soil	MKLNCNEHVKPNFAGLTPAVQQAEMKLILADLWPALKPLPVFKYVTDDYRAEIHFDRTRGEW
Ga0210393_109169221	3300021401	Soil	MKWNESQRAGPNIAGLASPVQQAEMKLLLAGKWPPLKPLPVFKYETDEYRASIDFDKTRGEWVCHK
Ga0210393_116771251	3300021401	Soil	MKRNEHERARPNIAGLASPAQQSEMKLLLAGKWPPLKPLPVFKYETVEYRASIDFDKTRGEWV
Ga0210397_104444192	3300021403	Soil	MKLSQHERARPNLAGLTSPVQQAEMKLLLAGGWPPLKPLPVFKYEAD
Ga0210387_108144001	3300021405	Soil	MKDERASPNIAGLTSPVQQATMKLLLAGRWPPLKPLPIFKYETDEYRASIDFDK
Ga0210384_104888331	3300021432	Soil	MKLDEHERPRPNVAGLASPVQQAEMKLLLAGKWPPLKPLPVFKYETEEYRASIDFDKTRGEWACHKISLP
Ga0242655_102241692	3300022532	Soil	MKLNEHVRARPNIAGLTSPVQQAEIKLLLAGRWPPLKPLPVFKYETDDYRASIDFDKMRGEWVCH
Ga0242655_103348221	3300022532	Soil	MKRNEHERARPNLAGLTSPVQQAELRILLVGRWPALKPLPVFKYE
Ga0247676_10550601	3300024249	Soil	MKLNEHERPGPNIAGLMSPVQQDEMKLLLAGKWPPLRPLPVFKLE
Ga0209648_105923471	3300026551	Grasslands Soil	MKLNEHKRARPNIAGLTSPVQLAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDF
Ga0209418_10927121	3300027371	Forest Soil	MKYEHAKPNVAGLTSQVQQDEMRLILAGMWPPLKPLPVFKYGADEYRAEIHFDRTRGEW
Ga0209735_10300902	3300027562	Forest Soil	MNLNKHERPRPNIAGLSSLGQQAEMKLLLAGSWPPLKPLPVFKYETDAYRVSIDFDKLRG
Ga0208044_11005071	3300027625	Peatlands Soil	MKLNEHERARPNIAGLTSPLQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDKTRGEWVCR
Ga0209388_11954771	3300027655	Vadose Zone Soil	MKLNEHERARPNIAGLTSQVQQAEMKLILAGRWPPLKPLPVFKYETDEYRASIDFD
Ga0209011_10157391	3300027678	Forest Soil	MKLNGHERARPNIAGLTSPVQLAEMKLLLAGRWPPL
Ga0209446_10457352	3300027698	Bog Forest Soil	MKLHEQERAKRNLARAASPDQQAEINLLLAGRWPALKPLPVFKYEAHDYRASIDFDKTRGEWVCR
Ga0209180_107835651	3300027846	Vadose Zone Soil	MKLNEHERARPNIAGLTSQVQQAEMKLILAGRWPPLKPLPVFKYETDEYRASIDFDKTR
Ga0209701_100030051	3300027862	Vadose Zone Soil	MDVPCPKYNSIRPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDK
Ga0209701_100110894	3300027862	Vadose Zone Soil	MKLNEHERARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDK
Ga0209701_100427021	3300027862	Vadose Zone Soil	MKLNKHEQAKPNIAGLTSPVQQAEMKLILAGAWPALKPLPVFKYETDEYRASIDFDKTRGEWVCRKT
Ga0209488_106344381	3300027903	Vadose Zone Soil	MKLNEHERARPDIAGLTSPVQQAEMKLLLAGRWPPLKPLPV
Ga0209698_113154901	3300027911	Watersheds	MKLNEHERTRPNVAGLTSSVQQAEMKLILAGRWPPLKPLPIFKYETDEY
Ga0209526_106982471	3300028047	Forest Soil	MKLNEHERARPNIAGLTSPVQRAELRLLLGGKWPPLKPLPVFKYETDQYRASIDFDKTRG
Ga0308309_1000137011	3300028906	Soil	MKFDEHERSRPHIAGLTSPVQQAQLKLLLAGRWPPLKPLPVFKYETEEYRA
Ga0222749_107770081	3300029636	Soil	MKLNEHERARPNLAGLTSPVQQAEMKLLLAGGWPP
Ga0311356_100398281	3300030617	Palsa	MNLHEQAWPNIAGLAPVQQAEMKLLLARRWPPLKPLPVFKFETDEYRVSVDFDK
Ga0310038_103827081	3300030707	Peatlands Soil	MKLNEHERARPNIAGLTSPLQQAEMKLLLAGRWPPLKPLPVFKYETDEYR
Ga0310686_1022782641	3300031708	Soil	MKLNEHELAGPNIAGLTSAVQQAEIKLLLAGRWPPLKPLPVFKFETGEYRA
Ga0310686_1143283652	3300031708	Soil	MKLNEHERARPNLAGLTSPVQQAELKLLLVGRWPPLKPLPVFKY
Ga0307476_104640761	3300031715	Hardwood Forest Soil	MKLNEHERARPNIAGLTSPVQQAEMKLLLAGKWPPLKPLPVFKYETDEYRASIDFDKARGEWICHKTS
Ga0307469_104170333	3300031720	Hardwood Forest Soil	MDVPCPKRNSAGPNTAGLMSPVQQAEMRLLLAGKWPPLKPLPVFKYETDEYRASIDFDKT
Ga0307477_104809291	3300031753	Hardwood Forest Soil	MRLNKHEQAKPNIAGLTSQVQRAEMKLILAGAWPALKPLPVFKYETNEYRASI
Ga0307475_101194544	3300031754	Hardwood Forest Soil	MKLNEHQRAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFKYETEEYRASIDFDKARGEWVCRKISLP
Ga0307473_105462131	3300031820	Hardwood Forest Soil	MDVPCPKCNSTRPNIAGLTSPVQQAEMKSILAGAWPALKPLPVFKYETE
Ga0318530_103890872	3300031959	Soil	MKLDKHERARPNVAGLTSPVQRAEMDLLVAARWPALKP
Ga0307479_105995801	3300031962	Hardwood Forest Soil	MNLNERKRARPNIAGLTSPVQQAEMKLLLAGRWPPLKPLPVFKYEADEYRASIDFDKMRG
Ga0307479_111645691	3300031962	Hardwood Forest Soil	MKWNEHERAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFKYETDEYRASID
Ga0307479_115191191	3300031962	Hardwood Forest Soil	MKLNEHQRAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFKYETEE
Ga0310911_106309452	3300032035	Soil	MKLDKHERARPNVAGLTSPVQRAEMDLLVAARWPALKPLPVFRYESKDYRATIHFDKTRGEWVCRKTF
Ga0311301_102273684	3300032160	Peatlands Soil	MKLNEHESVRPNLAGLVSAVQRAEMKSLLAGRWPPLKPLPVFKYETDEYRASIDFDKT
Ga0307470_118269621	3300032174	Hardwood Forest Soil	MNLKEHERARPNVAGPVSPVQQAEMKLLLAGMWPPLKPLPVF
Ga0307471_1009171592	3300032180	Hardwood Forest Soil	MKLNEYQRAGPNIAGLTSPVQQAEMKLLLAGRWPALKPLPVFK
Ga0307471_1027819561	3300032180	Hardwood Forest Soil	MDVPCPKCNSTRPNIAGLTSPMQQAEMKLLLAGRWPPLKPLPVFKYETDEYRASIDFDKTRGEWV
Ga0307471_1033153761	3300032180	Hardwood Forest Soil	MKLNKHEQAKPNFAGLTSQVQQAEMKLILAGTWPPLKPLPVFKYGTAEYRAEIHFDGTRG
Ga0348332_105475192	3300032515	Plant Litter	MKWNGHERTRPNIAGLASPVQQAEMKLLLAGRWPPLKPLPVFKYE
Ga0310914_102155741	3300033289	Soil	MKLDKHERARPNVAGLTSPVQRAEMDLLVAARWPALKPLPVFRY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090645

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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