NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F090548

Metagenome Family F090548

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090548
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 99 residues
Representative Sequence MRLVPLTSIALACALGTAAARADDVTFTGFAHGSETVAFSLAAPNAVASGTVNAGGFATILNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHTFANN
Number of Associated Samples 85
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 95.37 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.52 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (53.704 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(73.148 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(84.259 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 12.60%    β-sheet: 12.60%    Coil/Unstructured: 74.80%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF12244DUF3606 36.11
PF00801PKD 6.48
PF00027cNMP_binding 3.70
PF07589PEP-CTERM 1.85
PF13448DUF4114 0.93
PF04357TamB 0.93
PF13442Cytochrome_CBB3 0.93
PF14247DUF4344 0.93
PF02769AIRS_C 0.93
PF02503PP_kinase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0855Polyphosphate kinaseInorganic ion transport and metabolism [P] 0.93
COG2911Phospholipid transport to the outer membrane protein TamBCell wall/membrane/envelope biogenesis [M] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A53.70 %
All OrganismsrootAll Organisms46.30 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005184|Ga0066671_10498890Not Available781Open in IMG/M
3300005327|Ga0070658_10615324All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404942Open in IMG/M
3300005331|Ga0070670_100321646All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041355Open in IMG/M
3300005331|Ga0070670_100399705Not Available1213Open in IMG/M
3300005333|Ga0070677_10408956All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005335|Ga0070666_11253963All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005337|Ga0070682_101799043All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005338|Ga0068868_100815149Not Available843Open in IMG/M
3300005339|Ga0070660_100269304All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041392Open in IMG/M
3300005344|Ga0070661_100230649All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041423Open in IMG/M
3300005355|Ga0070671_100523563All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300005356|Ga0070674_100527989All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404987Open in IMG/M
3300005438|Ga0070701_10966177All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → Methylotenera versatilis592Open in IMG/M
3300005456|Ga0070678_101094585All Organisms → cellular organisms → Bacteria → Proteobacteria736Open in IMG/M
3300005457|Ga0070662_100895537Not Available757Open in IMG/M
3300005539|Ga0068853_101047759Not Available786Open in IMG/M
3300005543|Ga0070672_100349295All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300005543|Ga0070672_102018174Not Available519Open in IMG/M
3300005547|Ga0070693_100822068All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300005578|Ga0068854_100026338All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3996Open in IMG/M
3300005616|Ga0068852_100229662All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041768Open in IMG/M
3300005616|Ga0068852_100970920Not Available868Open in IMG/M
3300005617|Ga0068859_100141345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM14172481Open in IMG/M
3300005718|Ga0068866_10420445Not Available867Open in IMG/M
3300005834|Ga0068851_10184788All Organisms → cellular organisms → Bacteria → Proteobacteria1156Open in IMG/M
3300005834|Ga0068851_10306048All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300005840|Ga0068870_11249918Not Available539Open in IMG/M
3300005841|Ga0068863_101291192All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404737Open in IMG/M
3300005841|Ga0068863_102575289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166518Open in IMG/M
3300006028|Ga0070717_10595371All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041003Open in IMG/M
3300006237|Ga0097621_100312785All Organisms → cellular organisms → Bacteria → Proteobacteria1390Open in IMG/M
3300006237|Ga0097621_101213628All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404711Open in IMG/M
3300009101|Ga0105247_11646298Not Available529Open in IMG/M
3300009148|Ga0105243_10966978All Organisms → cellular organisms → Bacteria → Proteobacteria852Open in IMG/M
3300009156|Ga0111538_10748345All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041238Open in IMG/M
3300009156|Ga0111538_13253884Not Available565Open in IMG/M
3300009177|Ga0105248_10732459All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041116Open in IMG/M
3300010301|Ga0134070_10477577Not Available503Open in IMG/M
3300010397|Ga0134124_11266391Not Available759Open in IMG/M
3300012531|Ga0136640_10272156Not Available723Open in IMG/M
3300013102|Ga0157371_10808205Not Available707Open in IMG/M
3300013102|Ga0157371_11588961Not Available512Open in IMG/M
3300013104|Ga0157370_10259709All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041605Open in IMG/M
3300013105|Ga0157369_12309469Not Available545Open in IMG/M
3300013296|Ga0157374_10228328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM14171828Open in IMG/M
3300013296|Ga0157374_10486577All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041237Open in IMG/M
3300013297|Ga0157378_10274438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax1623Open in IMG/M
3300013306|Ga0163162_12336693Not Available614Open in IMG/M
3300014326|Ga0157380_11452274All Organisms → cellular organisms → Bacteria → Proteobacteria738Open in IMG/M
3300014326|Ga0157380_12223920Not Available612Open in IMG/M
3300014968|Ga0157379_10132405All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4042244Open in IMG/M
3300014969|Ga0157376_10289804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041545Open in IMG/M
3300014969|Ga0157376_10390395All Organisms → cellular organisms → Bacteria → Proteobacteria1343Open in IMG/M
3300015371|Ga0132258_12440675Not Available1309Open in IMG/M
3300015372|Ga0132256_100849721Not Available1029Open in IMG/M
3300015373|Ga0132257_100154378All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4042692Open in IMG/M
3300015373|Ga0132257_104158696Not Available526Open in IMG/M
3300015374|Ga0132255_103780917Not Available643Open in IMG/M
3300017792|Ga0163161_10330417All Organisms → cellular organisms → Bacteria → Proteobacteria1207Open in IMG/M
3300018476|Ga0190274_12363542Not Available629Open in IMG/M
3300025321|Ga0207656_10198607Not Available968Open in IMG/M
3300025321|Ga0207656_10234905Not Available894Open in IMG/M
3300025321|Ga0207656_10385587Not Available703Open in IMG/M
3300025901|Ga0207688_10073692All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041941Open in IMG/M
3300025907|Ga0207645_10330772Not Available1017Open in IMG/M
3300025908|Ga0207643_10625090Not Available694Open in IMG/M
3300025909|Ga0207705_10337671All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041159Open in IMG/M
3300025923|Ga0207681_10219676All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041470Open in IMG/M
3300025925|Ga0207650_10170742All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041728Open in IMG/M
3300025925|Ga0207650_11670200Not Available540Open in IMG/M
3300025925|Ga0207650_11707714Not Available533Open in IMG/M
3300025926|Ga0207659_10228175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041500Open in IMG/M
3300025930|Ga0207701_10579109Not Available957Open in IMG/M
3300025931|Ga0207644_10264327Not Available1377Open in IMG/M
3300025931|Ga0207644_10583934All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404927Open in IMG/M
3300025933|Ga0207706_10457607Not Available1103Open in IMG/M
3300025935|Ga0207709_10542968Not Available913Open in IMG/M
3300025937|Ga0207669_10861277All Organisms → cellular organisms → Bacteria → Proteobacteria755Open in IMG/M
3300025939|Ga0207665_11065484Not Available644Open in IMG/M
3300025940|Ga0207691_10764091Not Available813Open in IMG/M
3300025944|Ga0207661_10429597Not Available1201Open in IMG/M
3300025945|Ga0207679_10695768Not Available922Open in IMG/M
3300025945|Ga0207679_11391261Not Available644Open in IMG/M
3300025945|Ga0207679_11408864Not Available639Open in IMG/M
3300025981|Ga0207640_10072697All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4042321Open in IMG/M
3300025981|Ga0207640_10338363All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041204Open in IMG/M
3300025986|Ga0207658_10023484All Organisms → cellular organisms → Bacteria → Proteobacteria4305Open in IMG/M
3300025986|Ga0207658_11625954Not Available591Open in IMG/M
3300026023|Ga0207677_11370477Not Available651Open in IMG/M
3300026067|Ga0207678_10134070All Organisms → cellular organisms → Bacteria → Proteobacteria2113Open in IMG/M
3300026088|Ga0207641_11560827Not Available662Open in IMG/M
3300026088|Ga0207641_12341854Not Available533Open in IMG/M
3300026089|Ga0207648_10320301All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041393Open in IMG/M
3300026121|Ga0207683_11075864Not Available746Open in IMG/M
3300026142|Ga0207698_12016655Not Available591Open in IMG/M
3300028587|Ga0247828_10638491Not Available655Open in IMG/M
3300028596|Ga0247821_10128180All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4041453Open in IMG/M
3300031152|Ga0307501_10231604Not Available542Open in IMG/M
3300031226|Ga0307497_10617013Not Available550Open in IMG/M
3300031740|Ga0307468_101787809Not Available581Open in IMG/M
3300031901|Ga0307406_10725588Not Available832Open in IMG/M
3300031908|Ga0310900_11726780Not Available532Open in IMG/M
3300031911|Ga0307412_10925758Not Available765Open in IMG/M
3300031938|Ga0308175_101483627All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium757Open in IMG/M
3300031938|Ga0308175_102330790Not Available600Open in IMG/M
3300032008|Ga0318562_10185994Not Available1202Open in IMG/M
3300032039|Ga0318559_10423315Not Available621Open in IMG/M
3300032261|Ga0306920_103328926Not Available598Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere11.11%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere11.11%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere9.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012531Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066671_1049889023300005184SoilMRLVPAASLAFACTLALVGQARADDVTFTGFAHGSESVNFSLVAPNVATSGSALAGGFATVLNGGPSFITYCVDVYQHIDFGVPYAEYGAPGTGHVFSNDRAYADLG
Ga0070658_1061532413300005327Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSFVSYCVDLYQHIAFGTVYPEYTAPRTTHVFANDRAYGDLGRLYA
Ga0070670_10032164613300005331Switchgrass RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATSLNGNPSFVSYCVDLYQHIAFGTLY
Ga0070670_10039970513300005331Switchgrass RhizosphereMRLVPLTSIALACALGTAAARADDVTFTGFAHGSETVAFSLAAPNAVASGTVNAGGFATILNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHTFANN
Ga0070677_1040895613300005333Miscanthus RhizosphereMRLATLTAIALACTLGSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFVSYCVDLYQHI
Ga0070666_1125396323300005335Switchgrass RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISF
Ga0070682_10179904323300005337Corn RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFV
Ga0068868_10081514913300005338Miscanthus RhizosphereMRHVPLTSIALACALGTTAARADDVTFTGFAHGSEVVSFSLVAPNAVASGTVNAGGFATILNGGPSFETYCVDLYQHISFGTLYPEYTAPGTTHVFANSRAYADLGR
Ga0070660_10026930413300005339Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSFVSYCVDLYQHIA
Ga0070661_10023064933300005344Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATILNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGTTHPFANNRAYGDLG
Ga0070671_10052356313300005355Switchgrass RhizosphereMRLVPIASVALACALGATTARGDNVTFPGFAHGSETVAFSLTAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISFGTLY
Ga0070674_10052798913300005356Miscanthus RhizosphereMRSVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATILNGNPSFVSYCVDLYQHIAFGTLYSEYTA
Ga0070701_1096617713300005438Corn, Switchgrass And Miscanthus RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVSYCVDLYQHIAFGTLYPEYTAPGTSHVFANNRAYADLGRLYANAGVVDTALEEAAFQI
Ga0070678_10109458513300005456Miscanthus RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVSYCVDLYQHIAFGTLYPEYTAPGTSHV
Ga0070662_10089553723300005457Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGTVYPEYTAPGTTHVFANNRAYADL
Ga0068853_10104775923300005539Corn RhizosphereMRSVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATSLNGNPSFVSYCVDLYQH
Ga0070672_10034929513300005543Miscanthus RhizosphereMRLIPIASVALACALGATAARGDNVTFPGFAHGSETVAFSLTAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISFGTL
Ga0070672_10201817413300005543Miscanthus RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFATILNGNPSFVSYCVDLYQHIAFGTLYP
Ga0070693_10082206813300005547Corn, Switchgrass And Miscanthus RhizosphereMRLVTLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVTYCVDLYQHIAFGTLYPEYTAPGTSHVFANNRAYADLGRLYANAGVVDTA
Ga0068854_10002633813300005578Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGT
Ga0068852_10022966213300005616Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATSLNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGTTH
Ga0068852_10097092013300005616Corn RhizosphereMLRFTPRLLALACVLAVTGQARADDVTFTGFANGSETVAFTLASPNAAASGSVYAGGFATVLNGGPSFVSYCVDLYQHISFG
Ga0068859_10014134533300005617Switchgrass RhizosphereMRTVPALSLALAFFALTGAGQAQAGDVTFTGFAHGSQSVNFTLASPNTATSGSAAAGGFATVLNGGPSFVSYCVDVYQHIAFGTLYPEYTGPGTSHVFSNARAYADLGRLYGVAGGVDTSVEEA
Ga0068866_1042044513300005718Miscanthus RhizosphereMRLVPLTAIALACTFGTATARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFATILNGGPSFVSYCVDLYQHI
Ga0068851_1018478813300005834Corn RhizosphereMRLATLTSIALACTLCSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFVSYCVDLYQHISFGTIYPEYTAPGASHVFANSRAYADIGRLYANAGVVDTSVEEAAFQ
Ga0068851_1030604833300005834Corn RhizosphereMRLAPLASIALACALGTAAARADNVTFTGFAHGSETVAFSLVAPNGPASGTVNAGGFATILNGSPSFVTYCVDLYQHI
Ga0068870_1124991813300005840Miscanthus RhizosphereMRHVPLTSIALACALGTTAARADDVTFTGFAHGSEVVSFSLVAPNAVASGTVNAGGFATILNGGPSFETYCVDLYQHISFGTLYPEYTAPGTTHVFANSRA
Ga0068863_10129119233300005841Switchgrass RhizosphereMRLVPIASVALACALGATTARGDNVTFPGFAHGSETVAFSLTAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISFGTLYSDYSAPGSTHVFANNRAYADLGRLYANA
Ga0068863_10257528913300005841Switchgrass RhizosphereMRLVPLTSVALACALGTSTARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFSTVLNGGPSFVSYCVDLYQHIGFGTLYPEYTAPGTTHVFANNRAYADLGRLYANA
Ga0070717_1059537113300006028Corn, Switchgrass And Miscanthus RhizosphereMRLVPLAPIALACALCAAPARADDVTFTGFAHGSETVSFSLVAPNAAASGTVNAGGFATILNGSPSFVTYCVD
Ga0097621_10031278513300006237Miscanthus RhizosphereMRLAPTSIALACGLALAAEARADTVTFTGFAHGAETVNFSLNYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGEPYAEYGSPGTGHVFANSRAYADLGRLYSVAGVVDTSVKEAAFQIAVW
Ga0097621_10121362813300006237Miscanthus RhizosphereMRLVPIASVALACALGATAARGDNVTFPGFAHGSETVAFSITAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISF
Ga0105247_1164629813300009101Switchgrass RhizosphereMRLVPLTSIALACTLGAATARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNRA
Ga0105243_1096697823300009148Miscanthus RhizosphereMRLAPLTSVALACGLALAAEARADNVTFTGFAHGAETVNFSVSYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGEPYAEYGSPGTGHVFANSRAYADLGRLYSVAGVVDTS
Ga0111538_1074834513300009156Populus RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVV
Ga0111538_1325388423300009156Populus RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGGPSF
Ga0105248_1073245933300009177Switchgrass RhizosphereMRLVPLTSIALACILGAATARADDVTFTGFAHGSETVAFTLVAPNAAASGTVNAGGFATILNGSPSFVSYCVDLYQHINFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVV
Ga0134070_1047757713300010301Grasslands SoilMRLVPLAPIALACALCGAPARADDVTFTGFAHGSETVHFSLVAPNVVASGDVNAGGFATVLNGGPSFVSYCVDLYQHISFG
Ga0134124_1126639113300010397Terrestrial SoilMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVSFSLVAPNAVASGSVSAGGFATVLNGGPSFVTYCVDLYQHISFGTLYSDYTAPGSTHV
Ga0136640_1027215623300012531Polar Desert SandMRKMTFSLFAAALTLGIASQARADSVLFTGFAGGSQSVHYQLLAPNAATSGNANAGGFATVLNGGPSFVSYCVDLYERIDFGTTYTNYTGPNTSHVFANASAYADLGRLYANVGTVSGAAQQAAFQIAVW
Ga0157371_1080820523300013102Corn RhizosphereMRLVPLASITLACALGTTAARADNVTFTGFAHGSETVAFSLVAPNGPASGTVNAGGFATILNGSPSFVTYCVDLYQHISFGPL
Ga0157371_1158896113300013102Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTAAGTVNAGGFATILNGSPSFVTYCVDLYQHINFGT
Ga0157370_1025970943300013104Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGTLYPEYTAPG
Ga0157369_1230946913300013105Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGTVYPEYTAPGTTHVFANN
Ga0157374_1022832833300013296Miscanthus RhizosphereMRIFRPSSIVAAALAFAASAPARADDVTFTGFAHGSQSVDYSLFAPNAVTSGSASAGGFETVLNGGPSFVSYCFDLYQHISFGTLYPMHSPPGTSHVFVNPRAYDDLGRLYNVAGVVD
Ga0157374_1048657743300013296Miscanthus RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVVDTAVE
Ga0157378_1027443833300013297Miscanthus RhizosphereMRLAPSASIALALGVAITGSARADNVTFTGFAHGAETVNFALNYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGELYPEYSAPGTSHVFANDRAYADLGRLYSVAGAVDTSVKEA
Ga0163162_1233669323300013306Switchgrass RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSFVSYCVDLYQHIAFGTVYPEYTAPGTTHVFANDRAYGDLGRLYAHAGV
Ga0157380_1145227413300014326Switchgrass RhizosphereMRLAPTSIALACGLALAAEARADTVTFTGFAHGAETVNFSLNYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGEPYAEYGSPGTGHVFANSRAYADLGRLYSVAGVVDTSVKEAAFQIA
Ga0157380_1222392023300014326Switchgrass RhizosphereMRLVPLTSIALACALGTATARADDVTFSGFAHGSETVAFSLVAPNAVASGTVNAGGFATVLNGGPSFVSYCVDLYQHI
Ga0157379_1013240553300014968Switchgrass RhizosphereMRLVPLASIALATALAATAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGGPSFVSYCVDLYQHITFGTLYPEYTAPGTSHVFANNSRAYADLGRLYANAGVVDTSVKEAAFQIAVWEIAYETT
Ga0157376_1028980443300014969Miscanthus RhizosphereMRLVPLTSVALACALGTSTARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFSTVLNGGPSFVSYCVDLYQHIG
Ga0157376_1039039523300014969Miscanthus RhizosphereMRLAPSASIALALGVAITGSARADNVTFTGFAHGAETVNFALNYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGELYPEYSAPGTSHVFANDRAYADLGTTIEYPFM
Ga0132258_1244067543300015371Arabidopsis RhizosphereMRLVPLTSIALACALGTTAARADDVTFTGFAHGSETVAFSLAAPNAVSSGLVNAGGFATVLNGGPSFVSYCVDLYQH
Ga0132256_10084972123300015372Arabidopsis RhizosphereMRTVHAPSIALAFFALTAAGQAQAGDDVTFTGFAHGSQSVNFTLVSPNTATSGSAAAGGFATVLNGGPSFVSYCIDVYQHIAFGTLYPEYPGPGPSHVFSNA
Ga0132257_10015437863300015373Arabidopsis RhizosphereMRLVPLASIALVTALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVTYCVDLYQHISFG
Ga0132257_10415869613300015373Arabidopsis RhizosphereMRVAPFTSIALALGLALAVEARADNVTFTGFAHGAETVNFALNYADPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHISFGSLYPEYTAPGTTHVFANNRAYGDLGRLYANAGVIDTSVKEAAFQIA
Ga0132255_10378091713300015374Arabidopsis RhizosphereMRLVPLASIALVTALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVTYCVDLYQHISFGTLYPEYTAPGTTHVFANSRAYADRGRLYAN
Ga0163161_1033041723300017792Switchgrass RhizosphereMRLAPLTSVALACGLALAAEARAENVTFTGFAHGAETVNFSVSYPDPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGELYTEYGSPGTGHVFANNRAYADLGRLYSVAGVVDTSVKEAAFQIAVWEI
Ga0190274_1236354223300018476SoilMRQFTLTSIALACALGTAAARADDVTFTGFAHGSQTVAFSLAAPNAGASGTVNAGGFSTILNGGPTFVSYCVDLYQ
Ga0207656_1019860713300025321Corn RhizosphereMRTVPALSLALAFFALTGAGQAQAGDVTFTGFAHGSQSVNFTLASPNTATSGSAAAGGFATVLNGGPSFASYCVDVYQHIAFGTLYPEYTGPGTSHVFSNARAYADL
Ga0207656_1023490523300025321Corn RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVF
Ga0207656_1038558713300025321Corn RhizosphereMRLAPLASIALACALGTAAARADNVTFTGFAHGSETVAFSLVAPNGPASGTVNAGGFATILNGSPSFVTYCVDLYQH
Ga0207688_1007369213300025901Corn, Switchgrass And Miscanthus RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNR
Ga0207645_1033077213300025907Miscanthus RhizosphereMRLATLTAIALACTLGSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFVSYCV
Ga0207643_1062509013300025908Miscanthus RhizosphereMRHVPLTSIALACALGTTAARADDVTFTGFAHGSEVVSFSLVAPNAVASGTVNAGGFATILNGGPSFETYCVDLYQHISFGTLYPEYTAPGTTHVFANSRAYADLG
Ga0207705_1033767113300025909Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGT
Ga0207681_1021967643300025923Switchgrass RhizosphereMRLVPLTSIALACALGTATARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFATVLNGGPSFVSYCVDLYQHIAFGTLYPEYTA
Ga0207650_1017074223300025925Switchgrass RhizosphereMRLVPIASVALACALGATTARGDNVTFPGFAHGSETVAFSLTAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISFGTLYSDYTAPGSTHVFANNRA
Ga0207650_1167020013300025925Switchgrass RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATSLNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGTTHVFANDRAYGDLGRLYAHAGVVDTSVEEAAFQI
Ga0207650_1170771413300025925Switchgrass RhizosphereMRLATLTSIALACTLCSAAARADDVTFTGFAHGSQTVSFSLAAPNAAASGTVNAGGFSTILNGGPTFVSYCVDLYQHISFGTLYPEYTAPGASHVFANSRAYADIGRLYANAGVVDTSVEEAAFQ
Ga0207659_1022817553300025926Miscanthus RhizosphereMRRATLTSIALACTLCSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNG
Ga0207701_1057910923300025930Corn, Switchgrass And Miscanthus RhizosphereMRLVPLTAIALACALGTATARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFATVLNGGPSFVSYCVDLYQHIGFGTLYPEYTAPGTTHLFANDRAYADLGRLYANAGVVDTSVEEAAFQIAV
Ga0207644_1026432713300025931Switchgrass RhizosphereMRLATLTSIALACTLCSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFVSYCVDLYQHISFGTLY
Ga0207644_1058393423300025931Switchgrass RhizosphereMRLVPIASVALACALGATTARGDNVTFPGFAHGSETVAFSLTAPNAVASGTVSAGGFATILNGSPSFVTYCVDLYQHISFGTLYPEYTAPGTTHTFANNRAYSDLGRLYANAGVIDTS
Ga0207706_1045760713300025933Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGTVYPEYTAPGTTHVFANNRAYADLGRLYANAGVVDTSVE
Ga0207709_1054296813300025935Miscanthus RhizosphereMRLVPLTSVALACALGTSTARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFSTVLNGGPSFVSYCVDLYQHIGFGTL
Ga0207669_1086127713300025937Miscanthus RhizosphereMRLAPLTSVALACGLALAAEARADNVTFTGFAHGAETVNFSVSYPALTKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGELYTEYGSPGTGHVFANNRAYADLGRLYSVAGVVDTSVKEAAFQIAV
Ga0207665_1106548423300025939Corn, Switchgrass And Miscanthus RhizosphereMRLVPLAPIALACALCAAPARANDVTFTDFAHGSETVHFSLVAPNVMASGDVSAGGFATVLNGGPSFVSYCVDLYQHI
Ga0207691_1076409113300025940Miscanthus RhizosphereMRLATLTAIALACTLGSAAARADDVTFTGFAHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFV
Ga0207661_1042959713300025944Corn RhizosphereMRLVPLASIALATALAATAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGGPSFVSYCVDLYQHITFGTLYPEYTAPGTSHVFANNSRAY
Ga0207679_1069576813300025945Corn RhizosphereMRLATLTSIALACTLCSAAARADDVTFTGFEHGSQTVSFSLVAPNAAASGTVNAGGFSTILNGGPTFVSYCV
Ga0207679_1139126113300025945Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFATILNGNPSFVSYCVDLYQHIAFGTLYSEYTASGTTHLFANS
Ga0207679_1140886413300025945Corn RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVVDT
Ga0207640_1007269713300025981Corn RhizosphereMRRLPLASITLACALGAAAARADNVTFTGFAHGSETVAFSLIAPNVTASGTVNAGGFATILNGSPSFVTYCVDLYQHINFGTVYP
Ga0207640_1033836313300025981Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSF
Ga0207658_1002348413300025986Switchgrass RhizosphereMRTVPALSLALAFFALTGAGQAQAGDVTFTGFAHGSQSVNFTLASPNTATSGSAAAGGFATVLNGGPSFVSYCVDVYQHIAFGTLYPEYTGPGTSHVFSNARAYADLGRL
Ga0207658_1162595413300025986Switchgrass RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGAETVNFSVSYPDPAKNASGYVWAGGFATVDGPASFVSYCVDLYQHIGFGEPYAEYGSPGTGHVFANSRAYADLG
Ga0207677_1137047713300026023Miscanthus RhizosphereMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTAP
Ga0207678_1013407063300026067Corn RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVTYCVDLYQHISFGTLYPEYTAPGTTHVFA
Ga0207641_1156082723300026088Switchgrass RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAMASGTVNAGGFATILNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGTTHLFANNRAYGDLGRLYAHA
Ga0207641_1234185413300026088Switchgrass RhizosphereMRLVPLTSVALACALGTSTARADDVTFTGFAHGSETVAFSLVAPNAVASGTVNAGGFSTVLNGGPSFVSYCVDLYQHIGFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVVDT
Ga0207648_1032030143300026089Miscanthus RhizosphereMRLVPLTSIALACALGTATARADDVTFTGFAHGSETVAFSLVAPNAIASGTVNAGGFATVLNGGPSFVSYCVDLYQHIAFGTLYPEYTAPGTTH
Ga0207683_1107586413300026121Miscanthus RhizosphereMRLVPLASIALATALAGTAARADDVTFTGFAHGSQTVHFSLVAPNAVASGDVNAGGFATILNGSPSFVSYCVDLYQHIAFGTLYPEYTAPGTSHVFANN
Ga0207698_1201665523300026142Corn RhizosphereMRFVPLTSIALACALGATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFGTILNGNPSFVSYCVDLYQHIAFGTLYSEYTAPGTTHPFANNRAYGDLGRLYAHA
Ga0247828_1063849113300028587SoilMRLVPITSVALACALGTIAARAENVTFTGFAHGSETVSFSLVAPNAVASGSVNAGGFATVLNGGPSFVSYCVDLYQ
Ga0247821_1012818033300028596SoilMRLVPLAAIALACALCATAARADNVTFTGFAHGSETVGFSLVAPNAVASGTVNAGGFATILNGGPSFVSYCVDLYQHIAFGTPFPEYTA
Ga0307501_1023160413300031152SoilMRLLPFTSIALACALGLAAESRANDVTFTGFAHGSETVAFSLVAPNAVASGTVSAGGFATILNGGPSFVSYCVDLYQHISFGSLYPEYGAPGT
Ga0307497_1061701313300031226SoilMRLVPLTSIALACALGTATAWADDVTFTGFAHGSETVAFSLVAPNGPASGTVNAGGFATILNGG
Ga0307468_10178780913300031740Hardwood Forest SoilMRLVHATSLALACTLGLVGHARANDVTFTGFAHGSESVNFSLGAPNVATSGSASAGGFATILNGGPSFETYCVDVYQHIGFGTLYPEYGAPGTGHVFSNDRAYADLGRLYANAGV
Ga0307406_1072558823300031901RhizosphereMRLVHASIALATCALAVSNPAHADDVTFTGFAHGSQTVGFSLSTPNAAGSGSVSAGGFATILNGGPSFVSYCVDLYQHISFGTLYPEYGAPGTGHVFINDRAYADLGRLYANAGIVD
Ga0310900_1172678013300031908SoilMRLVPLTSIALACALGTTAAGAENVTFTGFAHGSETVAFSLAAPNAVASGTVNAGGFATILNGGPSFVSYCVDLYQHISFGTLYPEYTAPGTTHVFANNRAYADLGRLYANAGVVDTAVEEA
Ga0307412_1092575823300031911RhizosphereMRLVHASIALATCALAVSHPAHADDVTFTGFAHGSQTVGFSLSAPNAAGSGSVNAGGFATILNGGPSFVSYCVDLYQHISFGTLYPEYGAPGTGHVFINDRAYADLGRLYANAGIVDTSV
Ga0308175_10148362723300031938SoilMRLLAFSSVALASAFALSSPARADNVTFTGFAHGSETVNFTLSAPNAVKSGFVNAGGFSTVLNGGPSFVSYCVDLYQTITF
Ga0308175_10233079013300031938SoilMRLFSAHLIALACAVTLSSQARADDVTFTGFAHGAETVTFSLLAPNASASGTVYAGGFATVLNGGPSFVSYCVDL
Ga0318562_1018599413300032008SoilMRTFHVSPIVIAALAFAASTPVLAGDDVTFTGFAHGSESVDYSIVAPDTPTSGSASAGGFATVLNGGPSFVSYCVDLYQHISFGTLYPEYTGPDTSHVFANSRAYDDLGRLYNVAGVVDT
Ga0318559_1042331513300032039SoilMRTFHVSSIVIAALAFAASTQVRAGDDVTFTGFAHGSESVDFSLVAPDTPTSGSASAGGFATVLNGGPSFVTYCVDLYQHISFGTLYPEYTGPDTSHVFANSRAYDDLGRLYNVAGVVDTSVEEAAFQIAVWEIAY
Ga0306920_10332892623300032261SoilMRTFHVSSIVIAALAFAASTQVRAGDDVTFTGFAHGSESVDFSLVAPDTPTSGSASAGGFATVLNGGPSFVTYCVDLYQHISFGTLYPEYTGPDTSHVFANSRAYDDLGRLYNVAGVVDTSVEE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.