NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090547

Metagenome / Metatranscriptome Family F090547

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090547
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 79 residues
Representative Sequence VSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA
Number of Associated Samples 94
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.41 %
% of genes near scaffold ends (potentially truncated) 37.96 %
% of genes from short scaffolds (< 2000 bps) 88.89 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (68.519 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.370 % of family members)
Environment Ontology (ENVO) Unclassified
(32.407 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.444 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.70%    β-sheet: 26.13%    Coil/Unstructured: 71.17%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF07080DUF1348 32.41
PF01176eIF-1a 12.96
PF04542Sigma70_r2 10.19
PF13376OmdA 5.56
PF12680SnoaL_2 4.63
PF05257CHAP 1.85
PF07690MFS_1 1.85
PF08281Sigma70_r4_2 1.85
PF01791DeoC 1.85
PF02894GFO_IDH_MocA_C 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG3558Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamilyFunction unknown [S] 32.41
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 12.96
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 10.19
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 10.19
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 10.19
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 10.19
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.52 %
UnclassifiedrootN/A31.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459017|G14TP7Y02IGQRPNot Available770Open in IMG/M
3300001538|A10PFW1_10250329Not Available1061Open in IMG/M
3300002568|C688J35102_120625250All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300003990|Ga0055455_10100771All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300003997|Ga0055466_10187613Not Available605Open in IMG/M
3300004006|Ga0055453_10196863Not Available631Open in IMG/M
3300004114|Ga0062593_101702394All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300004479|Ga0062595_101670270Not Available598Open in IMG/M
3300005163|Ga0066823_10017404All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300005168|Ga0066809_10030816All Organisms → cellular organisms → Bacteria → Terrabacteria group1134Open in IMG/M
3300005336|Ga0070680_100348646All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300005356|Ga0070674_100967308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M
3300005364|Ga0070673_100383169All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300005365|Ga0070688_100126797All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300005444|Ga0070694_100834347Not Available758Open in IMG/M
3300005467|Ga0070706_101699792Not Available575Open in IMG/M
3300005834|Ga0068851_10128663All Organisms → cellular organisms → Bacteria1367Open in IMG/M
3300005842|Ga0068858_102111126Not Available557Open in IMG/M
3300005874|Ga0075288_1002573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2297Open in IMG/M
3300005886|Ga0075286_1033906Not Available681Open in IMG/M
3300005888|Ga0075289_1061701Not Available601Open in IMG/M
3300006237|Ga0097621_100318542All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300006237|Ga0097621_101961087Not Available559Open in IMG/M
3300006573|Ga0074055_10003100All Organisms → cellular organisms → Bacteria1412Open in IMG/M
3300006573|Ga0074055_11837331All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300006575|Ga0074053_11946231Not Available621Open in IMG/M
3300006578|Ga0074059_11560302Not Available644Open in IMG/M
3300006581|Ga0074048_10064119Not Available607Open in IMG/M
3300006755|Ga0079222_10213621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1174Open in IMG/M
3300006852|Ga0075433_10129595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2241Open in IMG/M
3300006871|Ga0075434_100002067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria17455Open in IMG/M
3300006871|Ga0075434_101346549Not Available724Open in IMG/M
3300006904|Ga0075424_102719404Not Available516Open in IMG/M
3300006953|Ga0074063_14158669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria969Open in IMG/M
3300009098|Ga0105245_10991127All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300009176|Ga0105242_10056827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3202Open in IMG/M
3300009545|Ga0105237_10113018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2708Open in IMG/M
3300010136|Ga0127447_1087232All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300010375|Ga0105239_11386642All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300010400|Ga0134122_12706983Not Available548Open in IMG/M
3300012198|Ga0137364_10859251All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300012212|Ga0150985_107088859Not Available569Open in IMG/M
3300012398|Ga0134051_1069471All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012483|Ga0157337_1015335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria652Open in IMG/M
3300012951|Ga0164300_10504584Not Available692Open in IMG/M
3300012951|Ga0164300_10652536All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga niastensis630Open in IMG/M
3300012951|Ga0164300_10870914Not Available566Open in IMG/M
3300012955|Ga0164298_10218805All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300012957|Ga0164303_10227406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1053Open in IMG/M
3300012960|Ga0164301_10422024All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300012961|Ga0164302_10552722All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300012984|Ga0164309_10653888All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300012987|Ga0164307_10089080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1899Open in IMG/M
3300012989|Ga0164305_11279767Not Available640Open in IMG/M
3300013296|Ga0157374_10055484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3698Open in IMG/M
3300013772|Ga0120158_10169496Not Available1181Open in IMG/M
3300014311|Ga0075322_1130124All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300014326|Ga0157380_10784622All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300014497|Ga0182008_10750645Not Available562Open in IMG/M
3300015371|Ga0132258_10018113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria15240Open in IMG/M
3300015371|Ga0132258_10705067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2541Open in IMG/M
3300015372|Ga0132256_102340837Not Available637Open in IMG/M
3300015373|Ga0132257_101095475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1005Open in IMG/M
3300015373|Ga0132257_103920576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. SOSP1-52541Open in IMG/M
3300015374|Ga0132255_100235731All Organisms → cellular organisms → Bacteria2608Open in IMG/M
3300015374|Ga0132255_102453804All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300018051|Ga0184620_10321304Not Available523Open in IMG/M
3300020070|Ga0206356_11435207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1543Open in IMG/M
3300020082|Ga0206353_11565996All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300021445|Ga0182009_10349018All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300025552|Ga0210142_1037094All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300025556|Ga0210120_1028130All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300025904|Ga0207647_10179971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1228Open in IMG/M
3300025915|Ga0207693_10165295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1742Open in IMG/M
3300025917|Ga0207660_10037589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3374Open in IMG/M
3300025918|Ga0207662_10720565All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300025934|Ga0207686_10271624All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300025936|Ga0207670_10639535All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300025937|Ga0207669_10676945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria846Open in IMG/M
3300025939|Ga0207665_10542491Not Available903Open in IMG/M
3300025960|Ga0207651_12089860Not Available509Open in IMG/M
3300025961|Ga0207712_10371678All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300025993|Ga0208415_1002441All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300026035|Ga0207703_10107338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2377Open in IMG/M
3300026078|Ga0207702_10191882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1888Open in IMG/M
3300026078|Ga0207702_11437630All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300027560|Ga0207981_1017873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1275Open in IMG/M
3300027907|Ga0207428_10147040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1795Open in IMG/M
3300028592|Ga0247822_11447024Not Available579Open in IMG/M
3300028711|Ga0307293_10091507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria963Open in IMG/M
3300028719|Ga0307301_10091918All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300028799|Ga0307284_10052566All Organisms → cellular organisms → Bacteria1436Open in IMG/M
3300028799|Ga0307284_10394067Not Available563Open in IMG/M
3300028807|Ga0307305_10056936All Organisms → cellular organisms → Bacteria1801Open in IMG/M
3300028807|Ga0307305_10347392All Organisms → cellular organisms → Bacteria → Terrabacteria group673Open in IMG/M
3300028812|Ga0247825_10670879Not Available745Open in IMG/M
3300028880|Ga0307300_10116694Not Available818Open in IMG/M
3300028884|Ga0307308_10180952All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300030336|Ga0247826_10061493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2158Open in IMG/M
3300030336|Ga0247826_10148006All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300030336|Ga0247826_11501715Not Available546Open in IMG/M
3300031091|Ga0308201_10128974Not Available767Open in IMG/M
3300031184|Ga0307499_10010307All Organisms → cellular organisms → Bacteria1879Open in IMG/M
3300031184|Ga0307499_10041988All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1088Open in IMG/M
3300031716|Ga0310813_10152639All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300031938|Ga0308175_102654972Not Available560Open in IMG/M
3300031996|Ga0308176_10542786All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300033433|Ga0326726_10279372All Organisms → cellular organisms → Bacteria1562Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.48%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.56%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.63%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010136Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025993Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_043834502170459017Switchgrass, Maize And Mischanthus LitterMADAPSIWEDDLPVGTKVQITYSNGKHRDGIILEHRADGLLKLATNRNPALGGIFFANPRHIAEVEPIDDQRGTTGPELG
A10PFW1_1025032933300001538PermafrostLXXXXXXXXAFSSWEDVLPVGTKVQITYSNGKHRDGTILEHRPDGLLKLATNPNRTLGAIYYANRVHIAEIEVLGD*
C688J35102_12062525023300002568SoilMSGSPSIWEHDLPVGTKVQITYSNGKHRDGIVLEHRPDGLLKLATNRNPALGGIFFANPQHIAEVEPIDDQRGTTGTDPG*
Ga0055455_1010077123300003990Natural And Restored WetlandsMSGAPSIWDDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEIIDDQHVSSAPDPSTPA*
Ga0055466_1018761323300003997Natural And Restored WetlandsMSGAPSIWEDELPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPQHIAEVELIDDHHGTTAPDPP*
Ga0055453_1019686323300004006Natural And Restored WetlandsDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEIIDDQHVSSAPDPSTPA*
Ga0062593_10170239423300004114SoilVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0062595_10167027013300004479SoilMSDTRSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA*
Ga0066823_1001740423300005163SoilMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0066809_1003081613300005168SoilMSGAASIWEADLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGTTGSDPG*
Ga0070680_10034864623300005336Corn RhizosphereVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0070674_10096730813300005356Miscanthus RhizosphereHDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPADITEIEVIDDQRVNAEPAAPA*
Ga0070673_10038316913300005364Switchgrass RhizosphereSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA*
Ga0070688_10012679733300005365Switchgrass RhizosphereVSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0070694_10083434723300005444Corn, Switchgrass And Miscanthus RhizosphereSVRVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0070706_10169979213300005467Corn, Switchgrass And Miscanthus RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEIEVIDDQRVDTGAAPSTPA*
Ga0068851_1012866333300005834Corn RhizospherePSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0068858_10211112613300005842Switchgrass RhizosphereSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0075288_100257323300005874Rice Paddy SoilMSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDSGPEPGTPA*
Ga0075286_103390613300005886Rice Paddy SoilMSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPEHITEVEVIVDQRVDSGPEPGTPA*
Ga0075289_106170113300005888Rice Paddy SoilMSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRV
Ga0097621_10031854223300006237Miscanthus RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA*
Ga0097621_10196108723300006237Miscanthus RhizosphereYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA
Ga0074055_1000310033300006573SoilVPYSAWMGGAPSIWEEDLPIGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGSEPG*
Ga0074055_1183733123300006573SoilMSNAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0074053_1194623123300006575SoilGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGSEPG*
Ga0074059_1156030213300006578SoilMSGAPSIWEADLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGTFFANPRHIAEVELIDDQRGTTGPDPG*
Ga0074048_1006411913300006581SoilMSGAASIWEADLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELID
Ga0079222_1021362113300006755Agricultural SoilRSIWEDHLPVGTKVQITYSNGKHRDGIILEHRSDGPLKLATNRNPALSGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA*
Ga0075433_1012959513300006852Populus RhizosphereVSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAP
Ga0075434_100002067153300006871Populus RhizosphereVSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA*
Ga0075434_10134654923300006871Populus RhizosphereVSDAPSIWRDELPVGTKVQITYSNGKHRDGIVVEHRADGLLKLETNRNPALSVVFFANPAHISEVEIIDEQRPADDPEPPPPAR*
Ga0075424_10271940413300006904Populus RhizosphereVSDAPSIWRDELPVGTKVQITYSNGKHRDGIVVEHRADGLLKLETNRNPALSVVFFANPAHISEVEIIDEQR
Ga0074063_1415866913300006953SoilTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0105245_1099112733300009098Miscanthus RhizosphereETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0105242_1005682723300009176Miscanthus RhizosphereMNDVSTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0105237_1011301843300009545Corn RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVELIDDQRVDTGAAPGTPA*
Ga0127447_108723223300010136Grasslands SoilMSGARSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQR
Ga0105239_1138664233300010375Corn RhizosphereYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0134122_1270698323300010400Terrestrial SoilMSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0137364_1085925123300012198Vadose Zone SoilMSGARSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGAAGPDPG*
Ga0150985_10708885913300012212Avena Fatua RhizosphereMSGSPSIWEHDLPVGTKVQITYSNGKHRDGIVLEHRPDGLLKLATNRNPALGGIFFANPQHIAEVEPIDDQRGTTGTDSR*
Ga0134051_106947113300012398Grasslands SoilMSGARSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGAAGPDP
Ga0157337_101533523300012483Arabidopsis RhizosphereMGDAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0164300_1050458413300012951SoilMAEAPSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGTTGTEPG*
Ga0164300_1065253613300012951SoilMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAPITEFEVIDDQRVNAEPAAPA*
Ga0164300_1087091413300012951SoilVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGIFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0164298_1021880533300012955SoilVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHLTEVEVIDDQRVDTGAAPSTPA*
Ga0164303_1022740633300012957SoilMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGTEQG*
Ga0164301_1042202413300012960SoilQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA*
Ga0164302_1055272223300012961SoilMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVRYTNPKHITEIEVIDDQRVNAEPAAPA*
Ga0164309_1065388823300012984SoilVSGSPSIWENDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGTEQG*
Ga0164307_1008908053300012987SoilMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGGFYSKPEHITEIAVI
Ga0164305_1127976723300012989SoilVSGSPSIWENDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGTEPG*
Ga0157374_1005548463300013296Miscanthus RhizosphereVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA*
Ga0120158_1016949633300013772PermafrostMTDAFSSWEDVLPVGTKVQITYSNGKHRDGTILEHRPDGLLKLATNPNRTLGAIYYANRVHIAEIEVLGD*
Ga0075322_113012413300014311Natural And Restored WetlandsMSGAPSIWEDELPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGGRFTNTQHIAEVELIDDHHGTTAPDPP*
Ga0157380_1078462213300014326Switchgrass RhizosphereIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA*
Ga0182008_1075064523300014497RhizosphereMSDTQSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA*
Ga0132258_1001811353300015371Arabidopsis RhizosphereMGDAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVLDDQRVDSGPEPGTPA*
Ga0132258_1070506743300015371Arabidopsis RhizosphereMSKAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0132256_10234083713300015372Arabidopsis RhizospherePSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLVTNRNPALGGVFFSNPAHITEIEVIDDQQVSAGPSTPG*
Ga0132257_10109547523300015373Arabidopsis RhizosphereMSKAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFSNPAHITEIEVIDDQRVNAEPAAPA*
Ga0132257_10392057613300015373Arabidopsis RhizosphereLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGTTGPELG*
Ga0132255_10023573113300015374Arabidopsis RhizosphereTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFYANPAHIAEVEVIDDQRVDSASQPGTPA*
Ga0132255_10245380413300015374Arabidopsis RhizosphereMPEAPSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGTTGPELG*
Ga0184620_1032130413300018051Groundwater SedimentMGGAPSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDVAPTAAALL
Ga0206356_1143520733300020070Corn, Switchgrass And Miscanthus RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0206353_1156599633300020082Corn, Switchgrass And Miscanthus RhizosphereTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0182009_1034901823300021445SoilMSDTQSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA
Ga0210142_103709423300025552Natural And Restored WetlandsMSGAPSIWDDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEIIDDQHVSSAPDPSTPA
Ga0210120_102813013300025556Natural And Restored WetlandsDDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEIIDDQHVSSAPDPSTPA
Ga0207647_1017997113300025904Corn RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQR
Ga0207693_1016529513300025915Corn, Switchgrass And Miscanthus RhizosphereMNDVPTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQ
Ga0207660_1003758943300025917Corn RhizosphereVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207662_1072056513300025918Switchgrass RhizospherePVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207686_1027162433300025934Miscanthus RhizosphereMNDVSTIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA
Ga0207670_1063953513300025936Switchgrass RhizosphereSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207669_1067694513300025937Miscanthus RhizosphereITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPADITEIEVIDDQRVNAEPAAPA
Ga0207665_1054249113300025939Corn, Switchgrass And Miscanthus RhizosphereKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207651_1208986023300025960Switchgrass RhizospherePSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA
Ga0207712_1037167823300025961Switchgrass RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA
Ga0208415_100244133300025993Rice Paddy SoilMSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDSGPEPGTPA
Ga0207703_1010733823300026035Switchgrass RhizosphereVSDAQSIWETDLPDGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207702_1019188253300026078Corn RhizosphereVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRV
Ga0207702_1143763013300026078Corn RhizosphereVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0207981_101787333300027560SoilMSGAASIWEADLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPRHIAEVELIDDQRGTTGSDPG
Ga0207428_1014704043300027907Populus RhizosphereVSDAPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPGTPA
Ga0247822_1144702413300028592SoilVRMSDSQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0307293_1009150723300028711SoilMSGAPSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGLDPG
Ga0307301_1009191823300028719SoilVSDAPSIWETDLPIGTKVQITYSNGKHRDGIILEHRTDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVGSGTDPTAPA
Ga0307284_1005256623300028799SoilMSDAPSIWQDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFSNPAHITEIEIIDDQRVNAGSDPGAPA
Ga0307284_1039406713300028799SoilMSNTPSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNRALGGVFYANPAHITEVEVIDDQRVGSDPDPGPAA
Ga0307305_1005693633300028807SoilMSDAPSIWQDELPVGTKVQITYSNGKHRDGIILEHRTDGLLKLATNRNPALGGVFFSNPAHITEIEIIDDQRVNAGSDPGAPA
Ga0307305_1034739223300028807SoilGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGLDPG
Ga0247825_1067087933300028812SoilPRQYSVRVSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDTGAAPSTPA
Ga0307300_1011669413300028880SoilVSDAPSIWETDLPIGTKVQITYSNGKHRDGIILEHRTDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVGSGTDPAAPA
Ga0307308_1018095233300028884SoilMSDAPSIWQDELPVGTKVQITYSNGKHRDGIILEHRADGLLKLATNRNPALGGVFFSNPAHITEIEIIDDQRVNAGSDPGAPA
Ga0247826_1006149323300030336SoilMSGASSIWEDDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGITGSEPG
Ga0247826_1014800643300030336SoilVRGVSGSPSIWENDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGTEQG
Ga0247826_1150171523300030336SoilMSGSPSIWENDLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGVFFANPRHIAEVELIDDQRGTTGTEQG
Ga0308201_1012897423300031091SoilMSDSPTSWDDELPIGTKVQITYSNGKHRDGTILEHRPDGLLKLATNPNRTLGAIYFANPLHIAEIEILEG
Ga0307499_1001030743300031184SoilVSDTPSIWETDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFFANPAHITEIEVIDDQRVDTGAAPSTPA
Ga0307499_1004198823300031184SoilMSNAPSIWEDELPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEIEVIDDQRVNAEPAAPA
Ga0310813_1015263943300031716SoilLASAYSARMSDTRSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA
Ga0308175_10265497213300031938SoilYSAGMSDARSIWEDDLPVGTKVQITYSNGKHRDGIILEHRSDGLLKLATNRNPALGGVFYSNPAHITEVEIIDDQRVDPGTEPGTRA
Ga0308176_1054278623300031996SoilMSDAQSIWETDLPVGTKVQITYSNGKHRDGIILEHRTDGLLKLATNRNPALGGVFFANPAHITEVEVIDDQRVDSGAAPSTPA
Ga0326726_1027937223300033433Peat SoilMSGAPSIWEADLPVGTKVQITYSNGKHRDGIVLEHRADGLLKLATNRNPALGGIFFANPQHIAEVELIDDQRGTTGPDPG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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