Metagenome Family F090542

Basic Information
Family ID	F090542
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	84 residues
Representative Sequence	LATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLLAALIAIVAIKRMGGFSLAKLFNDVAPAPGHQKQQARPYQRLEVKP
Number of Associated Samples	90
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.33 %
% of genes near scaffold ends (potentially truncated)	31.48 %
% of genes from short scaffolds (< 2000 bps)	81.48 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (62.037 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.593 % of family members)
Environment Ontology (ENVO)	Unclassified (37.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 0.00% Coil/Unstructured: 72.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03741	TerC	37.96
PF02272	DHHA1	8.33
PF00795	CN_hydrolase	3.70
PF13184	KH_5	2.78
PF04456	DUF503	0.93
PF02576	RimP_N	0.93
PF01702	TGT	0.93
PF02355	SecD_SecF	0.93
PF01035	DNA_binding_1	0.93
PF08529	NusA_N	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	37.96
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.93
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	0.93
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	0.93
COG1550	Stress-induced protein YlxP, DUF503 family	Function unknown [S]	0.93
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
All Organisms	root	All Organisms	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
cellular organisms	root	All Organisms → cellular organisms	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	13.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	13.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6.48 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.70 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.70 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.70 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.70 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105467287	Not Available	665	Open in IMG/M
3300000891\|JGI10214J12806_13261818	Not Available	530	Open in IMG/M
3300002568\|C688J35102_118520253	Not Available	567	Open in IMG/M
3300004081\|Ga0063454_101426094	Not Available	588	Open in IMG/M
3300004157\|Ga0062590_100477399	Not Available	1054	Open in IMG/M
3300004463\|Ga0063356_101286177	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300004463\|Ga0063356_104087064	Not Available	628	Open in IMG/M
3300004643\|Ga0062591_101946101	Not Available	604	Open in IMG/M
3300004643\|Ga0062591_101997467	Not Available	598	Open in IMG/M
3300004643\|Ga0062591_102390799	Not Available	553	Open in IMG/M
3300005328\|Ga0070676_10061767	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300005329\|Ga0070683_100004829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11160	Open in IMG/M
3300005329\|Ga0070683_100156864	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300005329\|Ga0070683_100238659	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300005329\|Ga0070683_101093052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	766	Open in IMG/M
3300005330\|Ga0070690_100962745	Not Available	671	Open in IMG/M
3300005336\|Ga0070680_100814062	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005338\|Ga0068868_100166059	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300005338\|Ga0068868_100907239	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005339\|Ga0070660_100877453	Not Available	756	Open in IMG/M
3300005347\|Ga0070668_100021469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4877	Open in IMG/M
3300005353\|Ga0070669_100130329	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300005354\|Ga0070675_100151005	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300005364\|Ga0070673_100258652	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300005365\|Ga0070688_100134367	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300005456\|Ga0070678_101130325	Not Available	724	Open in IMG/M
3300005530\|Ga0070679_101364770	Not Available	655	Open in IMG/M
3300005563\|Ga0068855_101001321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300005614\|Ga0068856_102310751	Not Available	546	Open in IMG/M
3300005614\|Ga0068856_102629215	Not Available	509	Open in IMG/M
3300005616\|Ga0068852_101750144	Not Available	644	Open in IMG/M
3300005618\|Ga0068864_101641098	Not Available	647	Open in IMG/M
3300005713\|Ga0066905_101643278	Not Available	589	Open in IMG/M
3300005719\|Ga0068861_100838003	Not Available	866	Open in IMG/M
3300005836\|Ga0074470_10938285	Not Available	1246	Open in IMG/M
3300005842\|Ga0068858_102054453	Not Available	565	Open in IMG/M
3300006046\|Ga0066652_102064019	Not Available	506	Open in IMG/M
3300006237\|Ga0097621_100497580	Not Available	1104	Open in IMG/M
3300006358\|Ga0068871_100780454	Not Available	880	Open in IMG/M
3300006844\|Ga0075428_101670670	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006954\|Ga0079219_11489980	Not Available	612	Open in IMG/M
3300009094\|Ga0111539_10034424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6141	Open in IMG/M
3300010362\|Ga0126377_10625455	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300010366\|Ga0126379_11099598	Not Available	901	Open in IMG/M
3300010403\|Ga0134123_10573461	Not Available	1079	Open in IMG/M
3300011434\|Ga0137464_1129046	Not Available	756	Open in IMG/M
3300012353\|Ga0137367_10024648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4681	Open in IMG/M
3300012469\|Ga0150984_105515171	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012896\|Ga0157303_10048765	Not Available	860	Open in IMG/M
3300012914\|Ga0157297_10029879	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300012914\|Ga0157297_10408012	Not Available	546	Open in IMG/M
3300012915\|Ga0157302_10137605	Not Available	816	Open in IMG/M
3300012916\|Ga0157310_10116787	Not Available	880	Open in IMG/M
3300012916\|Ga0157310_10232779	Not Available	688	Open in IMG/M
3300012955\|Ga0164298_10284373	Not Available	1016	Open in IMG/M
3300012957\|Ga0164303_10624998	Not Available	713	Open in IMG/M
3300012961\|Ga0164302_10375935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	960	Open in IMG/M
3300012987\|Ga0164307_10884032	Not Available	717	Open in IMG/M
3300013296\|Ga0157374_11163805	Not Available	792	Open in IMG/M
3300013296\|Ga0157374_11912938	Not Available	619	Open in IMG/M
3300013308\|Ga0157375_10744555	Not Available	1132	Open in IMG/M
3300013308\|Ga0157375_11089224	Not Available	935	Open in IMG/M
3300014166\|Ga0134079_10756689	Not Available	502	Open in IMG/M
3300014318\|Ga0075351_1034122	Not Available	873	Open in IMG/M
3300014969\|Ga0157376_10799291	Not Available	956	Open in IMG/M
3300015371\|Ga0132258_10147038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5646	Open in IMG/M
3300015371\|Ga0132258_11304214	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300015371\|Ga0132258_13487171	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300018073\|Ga0184624_10466855	Not Available	552	Open in IMG/M
3300018083\|Ga0184628_10003871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	7122	Open in IMG/M
3300018469\|Ga0190270_11245793	Not Available	784	Open in IMG/M
3300018481\|Ga0190271_10009866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6684	Open in IMG/M
3300019356\|Ga0173481_10535145	Not Available	604	Open in IMG/M
3300019361\|Ga0173482_10059878	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300020000\|Ga0193692_1048418	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300022756\|Ga0222622_10236828	Not Available	1230	Open in IMG/M
3300024055\|Ga0247794_10337906	Not Available	513	Open in IMG/M
3300024317\|Ga0247660_1002918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2421	Open in IMG/M
3300025315\|Ga0207697_10187738	Not Available	907	Open in IMG/M
3300025912\|Ga0207707_10076223	All Organisms → cellular organisms → Bacteria	2926	Open in IMG/M
3300025916\|Ga0207663_10307325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300025919\|Ga0207657_10357192	Not Available	1152	Open in IMG/M
3300025923\|Ga0207681_11370346	Not Available	594	Open in IMG/M
3300025930\|Ga0207701_10042844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4199	Open in IMG/M
3300025930\|Ga0207701_10284636	Not Available	1438	Open in IMG/M
3300025935\|Ga0207709_10615336	Not Available	861	Open in IMG/M
3300025936\|Ga0207670_11700062	Not Available	537	Open in IMG/M
3300025944\|Ga0207661_10000960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	18978	Open in IMG/M
3300025944\|Ga0207661_10078293	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300025944\|Ga0207661_10433035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1196	Open in IMG/M
3300025944\|Ga0207661_11826882	Not Available	553	Open in IMG/M
3300026023\|Ga0207677_10799779	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300026078\|Ga0207702_10682531	Not Available	1011	Open in IMG/M
3300026116\|Ga0207674_10848758	Not Available	881	Open in IMG/M
3300026118\|Ga0207675_100009440	All Organisms → cellular organisms → Bacteria	9130	Open in IMG/M
3300026142\|Ga0207698_12466994	Not Available	530	Open in IMG/M
3300027717\|Ga0209998_10024175	Not Available	1317	Open in IMG/M
3300027907\|Ga0207428_10013674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7079	Open in IMG/M
3300028145\|Ga0247663_1054978	Not Available	675	Open in IMG/M
3300028293\|Ga0247662_1001633	All Organisms → cellular organisms → Bacteria	2966	Open in IMG/M
3300028712\|Ga0307285_10143469	Not Available	651	Open in IMG/M
3300028782\|Ga0307306_10177024	Not Available	603	Open in IMG/M
3300031366\|Ga0307506_10421264	Not Available	551	Open in IMG/M
3300031716\|Ga0310813_10841767	Not Available	828	Open in IMG/M
3300031938\|Ga0308175_101171118	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.11%
Host-Associated	Host-Associated	38.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.56%
Plants	Host-Associated → Plants	38.89%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Sediment	Environmental → Aquatic → Sediment	5.56%
Roots	Host-Associated → Plants → Roots	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.96%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	10.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054672872	3300000364	Soil	LATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLLAALIAIVAIKRMGGFSLAKLFNDVAPVPGQQKQQARPYQRLEVKP*
JGI10214J12806_132618181	3300000891	Soil	MCPWIRPPRDPRISFGASLATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQ
JGI1027J12803_1093910991	3300000955	Soil	DPSDKLRAPLATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLLAALIAIVAIKRMGGFSLAKLFNDVAPVPGQQ
C688J35102_1185202532	3300002568	Soil	LATPDKDQERLPPRAPPPEKSFWALLPRRNFRRAFFLLVALIAIIVIKRMGGFSFAKLFNDVAPPGPQKHQTR
Ga0063454_1014260941	3300004081	Soil	LATPDKDQERLPPRAPPPEKSFWALLPRRNFRRAFFLLVALIAIIVIKRMGGFSFAKLFNDVAPSGPQKHQTRPYQHLEVKP*
Ga0062590_1004773991	3300004157	Soil	RRRRHPGTPWHFEMCPWIRPPRDPRISFGASLATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP*
Ga0063356_1012861772	3300004463	Arabidopsis Thaliana Rhizosphere	LPTNDHEPGPPREAPTEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLARMFDGVAPPPAAARDAQPPFQHLEVKPR*
Ga0063356_1040870641	3300004463	Arabidopsis Thaliana Rhizosphere	LQTHDHDSADPSRPPREPPAEKSFWALLPKRNLRYALFLIAALAAILVIKRMGGFSLAKLFNDVAPTPAPPSKAQQPPFQHLEVKPR*
Ga0062591_1019461012	3300004643	Soil	MCPWIRPPRDPRISFGASLATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP*
Ga0062591_1019974671	3300004643	Soil	EDHDPAEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRHLEVNPR*
Ga0062591_1023907991	3300004643	Soil	VSAEVNESGRRPEPPAEKSFWALLPRRNLRRALFLLAALIAIVAIKRMGGFSFAKLFNDVAPPPRPVPQPQRQFQHLEVRP*
Ga0070676_100617673	3300005328	Miscanthus Rhizosphere	LATQDHDPAEPGQPPRRPPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRRLEVKPR*
Ga0070683_1000048298	3300005329	Corn Rhizosphere	MCPWISHGPIPRISFAASLATQDKDEPRQDEPRLPPREPPPEKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKP*
Ga0070683_1001568642	3300005329	Corn Rhizosphere	VATHDQDRLDHPRRPFPEPPGDKNFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNDVAPPPAPARQSQPFRHLEVKP*
Ga0070683_1002386592	3300005329	Corn Rhizosphere	LATHDDEQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPSRQQGQPFRHLEVKP*
Ga0070683_1010930522	3300005329	Corn Rhizosphere	VATPDEERPAHPRNPPAEKTFWEMLPRRNFRRALFLLAALIAIVAIKRMGGFSLAKLFNDVAPAPAPAPQSQPPFRHLEVKPK*
Ga0070690_1009627452	3300005330	Switchgrass Rhizosphere	SLATPDKDPDRLPPREPPPEKSFWALLPQRNFRRALFLLAALIAIVAIKRMGGFSLAKLFNDVAPARGPQKQQAQPYRHLEVKP*
Ga0070680_1008140622	3300005336	Corn Rhizosphere	VATHDQDRLAPPRRPFPEPPGDKNFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNDVAPPPAPARQSQPFRHLEVKP*
Ga0068868_1001660591	3300005338	Miscanthus Rhizosphere	LATHDDDQQRQPPAEKSYWSLLPRRNFRRVVFLIAALLAIVVIKRMGGFSLAKLFNDVAPPPPAPSRQQGQPFQHLEVKP*
Ga0068868_1009072392	3300005338	Miscanthus Rhizosphere	MCPWISHGPIPRISFAASLATQDKDEPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP*
Ga0070660_1008774532	3300005339	Corn Rhizosphere	LATQDHDPVEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRRLEVKPR*
Ga0070668_1000214693	3300005347	Switchgrass Rhizosphere	LATQDHDPAEPGQPPRRPPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRHLEVNPR*
Ga0070669_1001303291	3300005353	Switchgrass Rhizosphere	LATQDHDPAEPGQPPRRPPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPF
Ga0070675_1001510053	3300005354	Miscanthus Rhizosphere	LPTHDHERPREPPAEQSFWALVPKRNLRRALFLIVALGAILFIKRMGGFSLSKLFNDVAGGGPPPASKAEPPFQRLEVKPR*
Ga0070673_1002586522	3300005364	Switchgrass Rhizosphere	LSTNDHEPGHPREAPAEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLVRLFDGVAPPPAAARDAEPQFQHLEVKPR*
Ga0070688_1001343672	3300005365	Switchgrass Rhizosphere	LSTNDHDPGYTRAAPAEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLVRLFDGVAPPPAAARDAEPQFQHLEVKPR*
Ga0070678_1011303251	3300005456	Miscanthus Rhizosphere	MCPWISLGPIPRISFAASLATEDKDGPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP*
Ga0070679_1013647702	3300005530	Corn Rhizosphere	VATHDQDRLAHPRRPFLEPAGDKSFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNQVAPAPAQQSRRPYQHLEVKP
Ga0068855_1010013211	3300005563	Corn Rhizosphere	MCPWISLGPIPRISFAASLATEDKDGPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFN
Ga0068856_1023107512	3300005614	Corn Rhizosphere	APLATPDKDQERLPSRAPPPEKSFWALLPRRNFRRAFFLLAALIAIIVIKRMGGFSFAKLFNDVAPPGPQKHQTRPYQHLEVKP*
Ga0068856_1026292151	3300005614	Corn Rhizosphere	VATHDQDRLDHPRRPFPEPPGDKNFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNDVAPPAPAPKSQQPYRHLEVKP*
Ga0068852_1017501442	3300005616	Corn Rhizosphere	GPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP*
Ga0068864_1016410982	3300005618	Switchgrass Rhizosphere	MCPWISHGPIPRISFAASLATQDKDEPRQDEPRLPPREPPPEKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLE
Ga0066905_1016432782	3300005713	Tropical Forest Soil	MLISQRPVPRISFAAPLSTHDQVSDRPREPPAEKSFWALLPRRNLRRALFLLAALVAILAIKRMGGFSLAKLFNDVAPARPPASETEPPVRHLEVKPR*
Ga0068861_1008380031	3300005719	Switchgrass Rhizosphere	PPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP*
Ga0074470_109382852	3300005836	Sediment (Intertidal)	LATPDKDPDRLPPREPPPEKSFWALLPYRNFRRAFFLLAALIAIVAIKRMGGFSLAKLFNDVAPARGPQKQQPQPYRHLEVKP*
Ga0068858_1020544532	3300005842	Switchgrass Rhizosphere	LATPDKDPDRLPPREPPPEKSFWALLPQRNFRRALFLLAALIAIVAIKRMGGFSLAKLFNDVAPARGPQKQQAQPYRHLEVKP*
Ga0066652_1020640191	3300006046	Soil	QPLADQGQKSFWALVPRRNFRRALFLLAALIAILAIKRMGGFSLAKLFNDVAPAPAPQAQPPLRHLEVKP*
Ga0097621_1004975802	3300006237	Miscanthus Rhizosphere	EKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKP*
Ga0068871_1007804542	3300006358	Miscanthus Rhizosphere	PDRLPPREPPPEKSFWALLPQRNFRRALFLLAALIAIVAIKRMGGFSLAKLFNDVAPARGPQKQQAQPYRHLEVKP*
Ga0075428_1016706702	3300006844	Populus Rhizosphere	VPPERSFWALLPRRNFRRALFLLAALIAVLAIKRMGGFSLSRLFDGVAPAPAPAPAPDSHAQPPFQHLEVKPR*
Ga0079219_114899801	3300006954	Agricultural Soil	LATEDKDDERLPPREPAPEKNFWALLPRRNFRRALFLIAALVAIIVIKRMGGFSLAKLFNDVAPPSQKQTGRGFQHLEVKP*
Ga0111539_100344245	3300009094	Populus Rhizosphere	LPSHDHVSRRPPEPPPEQSFWALLPKRNLRYALFLIAALVAILVIKRMGGFSLAKLFNDVAPAPAPPSKAQQPPFQHLEVKPR*
Ga0126377_106254552	3300010362	Tropical Forest Soil	VSAHVNESGRRPEAPAEKTFWALLPRRNFRRALFLLAALIAIIAIKRMGGFSLAKLFNDVAPAPAPAQHTQRPFQRLEVKP*
Ga0126379_110995982	3300010366	Tropical Forest Soil	VATHDGDRLVDPRHPPREAPAEKSFWAMLPRRNFRRALFLLAALIAILVIKRMGGFSLAKLFNDVAPTPAPQSQPPLRHLEVKP*
Ga0134123_105734611	3300010403	Terrestrial Soil	LATQDHDPVEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFR
Ga0137436_11352892	3300011423	Soil	AEQSFWALLPKRNLRYALFLIAALVAILVIKRMGGFSLSKLFNDVAPPPAPRSEPPFQRLEVKPR*
Ga0137464_11290462	3300011434	Soil	FPRISFAASLPTHDHESRTREPPAERSFWALLPKRNLRYALFLIAALAAILVIKRMGGFSLAKLFNDVAPPPAPQSEPPFQRLEVKPR*
Ga0137367_100246482	3300012353	Vadose Zone Soil	LANPDKDQQRLPPRAPPPEKSFWALLPRRNFRRAFFLLAALIAIIVIKRMGGFSFAKLFNDVAPPGPQKHQARPYQHLEVKP*
Ga0150984_1055151711	3300012469	Avena Fatua Rhizosphere	TPDKDHERLPPRAPPPDKSFWALLPRRNFRRAFFLLAALIAIVAIKRMGGFSFAKLFNDVAPPRPQKHQTRPYQHLEVKP*
Ga0157303_100487652	3300012896	Soil	LATHDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP*
Ga0157297_100298792	3300012914	Soil	LPTHDHEPGQNREPPAEQSFWALLPRRNLRRALFLLVALVAIIAIKRMGGFSLGKLFDGVAPGPARQPEPGFQHLDVKKPR*
Ga0157297_104080122	3300012914	Soil	LATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP*
Ga0157302_101376052	3300012915	Soil	LATQDKDEPRQDEPRLPPREPPPEKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKP*
Ga0157310_101167871	3300012916	Soil	LATHDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIVVIKRMGGFSLAKLFNDVAPPAPAPNRQQGQPFQHLEVKP*
Ga0157310_102327792	3300012916	Soil	LPTLDHEPGQNREPPAEQSFWALLPRRNLRRALFLLVALVAIIAIKRMGGFSLGKLFDGVAPGPARQPEPGFQHLD
Ga0164298_102843732	3300012955	Soil	LATHDEQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIVVIKRMGGFSLAKLFNDVAPPPPAPSRQQGQPFQHLEVKP*
Ga0164303_106249982	3300012957	Soil	PPEKSFWALLPRRNFRHALFLLAALIAIVAIKRMGGFSLAKLFNDVAPAPGQQKQQARPYQRLEVKP*
Ga0164302_103759352	3300012961	Soil	LATPDKDPDRLPPREPPPEKSFWALLPRRNFRHALFLIAALIAIVAIKRMGGFSLAKLFNDVAPARGPQTQQAQPYRHLEVKP*
Ga0164307_108840321	3300012987	Soil	DQQRQPPAEKSYWSLLPRRNFRRVVFLIAALLAIVVIKRMGGFSLAKLFNDVAPPPPAPSRQQGQPFQHLEVKP*
Ga0157374_111638052	3300013296	Miscanthus Rhizosphere	LATPDKDQERLPSRAPPPEKSFWALLPRRNFRRAFFLLAALIAIIVIKRMGGFSFAKLFNDVAPPGPQKHQTRPYQHLEVKP*
Ga0157374_119129381	3300013296	Miscanthus Rhizosphere	LATEDKDGPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKP*
Ga0157375_107445551	3300013308	Miscanthus Rhizosphere	QDHDPAEPGQPPRRPPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRHLEVNPR*
Ga0157375_110892241	3300013308	Miscanthus Rhizosphere	LATQDKDEPRQDEPRLPPREPPPEKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKH*
Ga0134079_107566892	3300014166	Grasslands Soil	VPTQDQESGRPPPPAAEKNFWALLPRRNFRRAVFLIAALIAIIVIKRMGGFSLAKLFDGVAPAPAGQSQPRFQHLEVKPR*
Ga0075351_10341221	3300014318	Natural And Restored Wetlands	PAEKSFWALLPRRNFRRALFLLLALVAIIVIKRMGGFSLTRLFDGVAPAPQPAPRQDQPFRRLEVKPR*
Ga0157376_107992912	3300014969	Miscanthus Rhizosphere	VAIHPEDPQANPRDRPPEPPAEKTFWQLLPRRNFRRALFLIAALAAIVAIKRMGGFSFAKLFNDVAPPPAHQTEPPLRHLEVKP*
Ga0132258_101470383	3300015371	Arabidopsis Rhizosphere	LATQDHDPVEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRHLEVNPR*
Ga0132258_113042142	3300015371	Arabidopsis Rhizosphere	LPTIDHDPGRRPPPPPEKTFWELLPRRNLRRALFLIAALIAVVVIKRMGGFSFAKLFDGVAPAPPRAPADRQAAPFQHLEVKPR*
Ga0132258_134871712	3300015371	Arabidopsis Rhizosphere	LATEDKEDERLPPRDPAPEKSFWALLPRRNFRRVVFLIAALVAIIVIKRMGGFSLAKLFNDVAPPAPAPSRKQGQPFQHLEVKP*
Ga0184624_104668551	3300018073	Groundwater Sediment	LATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLIAALIAIVAIKRMGGFSLAKLFNDVAPAPGQQKQQARPYQRLEVKP
Ga0184628_100038713	3300018083	Groundwater Sediment	LPTQDHDSADPSRPPRQPPAEQSFWALLPKRNLRYALFLIVALAAILVIKRMGGFSLAKLFNDVAPAPAPRSEPQQPSFQHLEVKPR
Ga0190270_112457932	3300018469	Soil	FPRISFAASLSTHDHESRRKPPAEQSFWALVPRRNLRRALFLILALGAILFIKRMGGFSLSKVFNDVAPPPAPQSEPPFQRLEVKPR
Ga0190271_100098663	3300018481	Soil	LSTHDHESRPRDPPAEQSFWALLPKRNLRRALFLIVALAAIVFIKRMGGFSLSKLFNDVAPPPQSEPPFQRLEVKPR
Ga0173481_105351452	3300019356	Soil	MCPWIRPLPDPRISFGASLATHDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPSRKQGQPFQHLEVKP
Ga0173482_100598782	3300019361	Soil	MCPWIRPPGDPRISFGASLATHDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIVVIKRMGGFSLAKLFNDVAPPAPAPSRQQGQPFQHLEVKP
Ga0193692_10484182	3300020000	Soil	LATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLIAALIAIVAIKRMGGFSLAKLFNDVAPVPGQQKQQARPYQRLEVKP
Ga0222622_102368282	3300022756	Groundwater Sediment	LPTHDHESRRPPEPPAEQSYWALLPKRNLRYALFLIAALAAILVIKRMGGFSLAKLFNDVAPPPAPQSEPPFQRLEVKPR
Ga0247794_103379061	3300024055	Soil	FEMCPWIRPPRDPRISFGASLATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP
Ga0247660_10029181	3300024317	Soil	LATLDHAPGDPRQPPRAPPAEKNFWALLPRRNFRRALFLLIALIAIIVIKRMGGFSLAKLFDGVAPAPQTAPQTQTPFRHLEVKPR
Ga0207666_10125501	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	PAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRRLEVKPR
Ga0207697_101877381	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	PREAPAEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLVRLFDGVAPPPAAARDAEPQFQHLEVKPR
Ga0207707_100762232	3300025912	Corn Rhizosphere	VATHDQDRLAPPRRPFPEPPGDKNFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNDVAPPPAPARQSQPFRHLEVKP
Ga0207663_103073252	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VATHDGERLSDPRQPLADPRQPSRSPPGEKNFWALLPRRNFRRALFLLAALIAIVAIKRMGGFSFAKLFDGVAPPVPAPQSQPPLRHLEVKP
Ga0207657_103571922	3300025919	Corn Rhizosphere	LATQDHDPVEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRRLEVKPR
Ga0207681_113703461	3300025923	Switchgrass Rhizosphere	MCPWISLGPIPRISFAASLATEDKDGPRQDEPRLPTREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP
Ga0207701_100428445	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MCPWISLGPIPRISFAASLATEDKDGPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP
Ga0207701_102846362	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LSTNDHEPGHPREAPAEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLVRLFDGVAPPPAAARDAEPQFQHLEVKPR
Ga0207709_106153362	3300025935	Miscanthus Rhizosphere	LATQDHDPAEPGQPPRRPPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRRLEVKPR
Ga0207670_117000622	3300025936	Switchgrass Rhizosphere	VSAEVNESGRRPEPPAEKSFWALLPRRNLRRALFLLAALIAIVAIKRMGGFSFAKLFNDVAPPPRPVPQPQRQFQHLEVRP
Ga0207661_100009607	3300025944	Corn Rhizosphere	MCPWISHGPIPRISFAASLATQDKDEPRQDEPRLPPREPPPEKSFWALLPRRDLRRALFLLAALIAIIAIKQMSGFSLAKLFNNVAPPPATQKQPGRPFQHLEVKP
Ga0207661_100782932	3300025944	Corn Rhizosphere	VATHDQDRLDHPRRPFPEPPGDKNFWQLMPRRNLRRALFLLVALFAILVIKRMGGFSFAKLFNDVAPPPAPARQSQPFRHLEVKP
Ga0207661_104330351	3300025944	Corn Rhizosphere	LATHDDEQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPSRQQGQPFRHLEVKP
Ga0207661_118268822	3300025944	Corn Rhizosphere	ADPRQPPRPPPAEKSFWALLPRRNFRRAVFLLLALVAIIVIKRMGGFSLTRLFDGVAPAPQPAPRQDQPFRHLEVKPR
Ga0207677_107997792	3300026023	Miscanthus Rhizosphere	MCPWISHGPIPRISFAASLATQDKDEPRQDEPRLPPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP
Ga0207702_106825311	3300026078	Corn Rhizosphere	LLDSSAVGPSDKLRAPLATPDKDQERLPPRAPPPEKSFWALLPRRNFRRAFFLLAALIAIIVIKRMGGFSFAKLFNDVAPPGPQNHQTRPYQHLEVKP
Ga0207674_108487582	3300026116	Corn Rhizosphere	LPTHDHERPREPPAEQSFWALVPKRNLRRALFLIVALGAILFIKRMGGFSLSKLFNDVAGGGPPPASKAEPPFQRLEVKPR
Ga0207675_1000094402	3300026118	Switchgrass Rhizosphere	LATQDHDPVEPGQPPRRVPAEKSFWAMLPRRNFRRALFLLAALVAIIVIKRMGGFSLAKLFDGVAPAPQPAPKQDQPFRHLEVNPR
Ga0207698_124669941	3300026142	Corn Rhizosphere	PPREPPPEKSFWARLPRRDLRRALFLLAALIAIIAIKQMGGFSLAKLFNDVAPPPATHKQPGRPFQHLEVKP
Ga0209998_100241751	3300027717	Arabidopsis Thaliana Rhizosphere	LPTNDHEPGPPREAPTEKSFWALLPRRNFRRVVFLLAALVAIIAIKRMGGFSLARMFDGVAPPPAAARDAQPPFQHLEVKPR
Ga0207428_100136742	3300027907	Populus Rhizosphere	LPSHDHVSRRPPEPPPEQSFWALLPKRNLRYALFLIAALVAILVIKRMGGFSLAKLFNDVAPAPAPPSKAQQPPFQHLEVKPR
Ga0247663_10549782	3300028145	Soil	LATLDHDPGDPRQPPRAPPAEKNFWALLPRRNFRRALFLLIALIAIIVIKRMGGFSLAKLFDGVAPAPQTAPQTQT
Ga0247662_10016332	3300028293	Soil	LATLDHDPGDPRQPPRAPPAEKNFWALLPRRNFRRALFLLIALIAIIVIKRMGGFSLAKLFDGVAPAPQTAPQTQTPFRHLEVKPR
Ga0307285_101434692	3300028712	Soil	LPTHDHEPGQKREPRAEQSFWALLPRRNFRRVLFLIAALVAIIAIKRMGGSSLGKLFDGVAPAPAPQQEPAFRHLEVKKPR
Ga0307306_101770241	3300028782	Soil	TPDKDQERMPPRAPPPEKSFWALLPRRNFRRAFFLLVALIAIIVIKRMGGFSFAKLFNDVAPPGPQKHQTRPYQHLEVKP
Ga0307506_104212642	3300031366	Soil	LATPDKDEPRLPPREPPPEKSFWALLPRRNFRHALFLLAALIAIVAIKRMGGFSLAKLFNDVAPAPGHQKQQARPYQRLEVKP
Ga0310813_108417672	3300031716	Soil	MCPWIRPPRDPRISFGASLATHDDDQQRQPPAEKSYWALLPRRNFRRVVFLIAALLAIIVIKRMGGFSLAKLFNDVAPPAPAPGRQQGQPFQHLEVKP
Ga0308175_1011711182	3300031938	Soil	VISQPAIPRISFAAALATHDEDRLAHPQQRVRETRADKSFWDLLPRRNFRRALFLLAALIAIITIKRMGGFSLAKLFNDVAPPPAPARQSERPFQRLEVKP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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