Metagenome Family F090519

Basic Information
Family ID	F090519
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	46 residues
Representative Sequence	MSAVQKFIASARKLHAEETDPAKRWEKMTPLLQELLADPSVKEQSK
Number of Associated Samples	102
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.13 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Unclassified (72.222 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.185 % of family members)
Environment Ontology (ENVO)	Unclassified (37.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.259 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF05221	AdoHcyase	36.11
PF00670	AdoHcyase_NAD	25.00
PF12773	DZR	2.78
PF14213	DUF4325	1.85
PF14076	DUF4258	1.85
PF04909	Amidohydro_2	0.93
PF00581	Rhodanese	0.93
PF02630	SCO1-SenC	0.93
PF06835	LptC	0.93
PF02482	Ribosomal_S30AE	0.93
PF00702	Hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	61.11
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.93
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
All Organisms	root	All Organisms	27.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
cellular organisms	root	All Organisms → cellular organisms	27.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.85 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	13.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	13.89 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	11.11 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	0.93 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	0.93 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Pluteineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Amanitaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae → Amanitaceae	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Amanita	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae → Amanitaceae → Amanita	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Amanita muscaria	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae → Amanitaceae → Amanita → Amanita muscaria	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.11 %
Amanita muscaria Koide BX008	strain	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae → Amanitaceae → Amanita → Amanita muscaria → Amanita muscaria Koide BX008	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01EXYXP	Not Available	637	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14580079	Not Available	832	Open in IMG/M
3300000890\|JGI11643J12802_11872225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1120	Open in IMG/M
3300000956\|JGI10216J12902_105633481	Not Available	615	Open in IMG/M
3300003996\|Ga0055467_10114899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300004019\|Ga0055439_10036156	Not Available	1281	Open in IMG/M
3300004070\|Ga0055488_10097000	Not Available	713	Open in IMG/M
3300004643\|Ga0062591_100088057	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300004778\|Ga0062383_10117474	Not Available	1158	Open in IMG/M
3300005206\|Ga0068995_10119031	Not Available	553	Open in IMG/M
3300005289\|Ga0065704_10624102	Not Available	595	Open in IMG/M
3300005295\|Ga0065707_10391848	Not Available	863	Open in IMG/M
3300005332\|Ga0066388_104559865	Not Available	705	Open in IMG/M
3300005347\|Ga0070668_100753705	Not Available	862	Open in IMG/M
3300005406\|Ga0070703_10164578	Not Available	844	Open in IMG/M
3300005444\|Ga0070694_101935910	Not Available	503	Open in IMG/M
3300005546\|Ga0070696_100358150	Not Available	1131	Open in IMG/M
3300005554\|Ga0066661_10533332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300005556\|Ga0066707_10009899	All Organisms → cellular organisms → Bacteria	4632	Open in IMG/M
3300005586\|Ga0066691_10104217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1596	Open in IMG/M
3300005617\|Ga0068859_100738810	Not Available	1073	Open in IMG/M
3300005713\|Ga0066905_102066132	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_105704777	Not Available	654	Open in IMG/M
3300005843\|Ga0068860_100445319	Not Available	1287	Open in IMG/M
3300005981\|Ga0081538_10002997	All Organisms → cellular organisms → Bacteria → Proteobacteria	16089	Open in IMG/M
3300006032\|Ga0066696_10622618	Not Available	699	Open in IMG/M
3300006237\|Ga0097621_102228875	Not Available	524	Open in IMG/M
3300007076\|Ga0075435_101512872	Not Available	589	Open in IMG/M
3300007076\|Ga0075435_101948333	Not Available	516	Open in IMG/M
3300009088\|Ga0099830_11288910	Not Available	607	Open in IMG/M
3300009100\|Ga0075418_10558187	Not Available	1231	Open in IMG/M
3300009100\|Ga0075418_11708898	Not Available	684	Open in IMG/M
3300009100\|Ga0075418_11928000	Not Available	643	Open in IMG/M
3300009147\|Ga0114129_10339663	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300009157\|Ga0105092_10188580	Not Available	1150	Open in IMG/M
3300009176\|Ga0105242_11956434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300009176\|Ga0105242_12348961	Not Available	580	Open in IMG/M
3300009176\|Ga0105242_12794986	Not Available	538	Open in IMG/M
3300009792\|Ga0126374_10005155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4563	Open in IMG/M
3300010037\|Ga0126304_10499031	Not Available	817	Open in IMG/M
3300010043\|Ga0126380_11414123	Not Available	612	Open in IMG/M
3300010360\|Ga0126372_10039712	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300010360\|Ga0126372_12769162	Not Available	542	Open in IMG/M
3300010366\|Ga0126379_11242533	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300010371\|Ga0134125_12738545	Not Available	536	Open in IMG/M
3300012140\|Ga0137351_1050539	Not Available	590	Open in IMG/M
3300012179\|Ga0137334_1148206	Not Available	531	Open in IMG/M
3300012210\|Ga0137378_11580926	Not Available	565	Open in IMG/M
3300012211\|Ga0137377_11255079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300012354\|Ga0137366_10374855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1039	Open in IMG/M
3300012486\|Ga0157331_1002814	Not Available	923	Open in IMG/M
3300012582\|Ga0137358_10081241	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300012922\|Ga0137394_11333575	Not Available	579	Open in IMG/M
3300012924\|Ga0137413_11538246	Not Available	542	Open in IMG/M
3300012944\|Ga0137410_11291654	Not Available	631	Open in IMG/M
3300012971\|Ga0126369_13273410	Not Available	531	Open in IMG/M
3300014255\|Ga0075320_1049270	Not Available	756	Open in IMG/M
3300014272\|Ga0075327_1000076	All Organisms → cellular organisms → Bacteria	22480	Open in IMG/M
3300014311\|Ga0075322_1180096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300014317\|Ga0075343_1179952	Not Available	540	Open in IMG/M
3300015373\|Ga0132257_100942583	Not Available	1084	Open in IMG/M
3300015374\|Ga0132255_106200095	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300016319\|Ga0182033_10810175	Not Available	825	Open in IMG/M
3300016422\|Ga0182039_10144360	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300017654\|Ga0134069_1313560	Not Available	558	Open in IMG/M
3300018054\|Ga0184621_10266357	Not Available	608	Open in IMG/M
3300018063\|Ga0184637_10328316	Not Available	923	Open in IMG/M
3300018084\|Ga0184629_10076046	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300018422\|Ga0190265_12816736	Not Available	581	Open in IMG/M
3300018466\|Ga0190268_10110878	Not Available	1303	Open in IMG/M
3300018481\|Ga0190271_11618447	Not Available	763	Open in IMG/M
3300019881\|Ga0193707_1000526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	13306	Open in IMG/M
3300020004\|Ga0193755_1011861	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300020018\|Ga0193721_1139171	Not Available	595	Open in IMG/M
3300021178\|Ga0210408_11476506	Not Available	510	Open in IMG/M
3300022563\|Ga0212128_10084010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	2054	Open in IMG/M
3300022756\|Ga0222622_10314462	Not Available	1082	Open in IMG/M
3300025002\|Ga0209001_1062969	Not Available	595	Open in IMG/M
3300025159\|Ga0209619_10106952	Not Available	1664	Open in IMG/M
3300025164\|Ga0209521_10416686	Not Available	727	Open in IMG/M
3300025319\|Ga0209520_10657040	Not Available	596	Open in IMG/M
3300025327\|Ga0209751_10530465	Not Available	957	Open in IMG/M
3300025567\|Ga0210076_1103153	Not Available	624	Open in IMG/M
3300025921\|Ga0207652_11298246	Not Available	630	Open in IMG/M
3300025938\|Ga0207704_11163391	Not Available	657	Open in IMG/M
3300025962\|Ga0210070_1034752	Not Available	605	Open in IMG/M
3300026111\|Ga0208291_1015657	Not Available	1391	Open in IMG/M
3300026542\|Ga0209805_1233871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	748	Open in IMG/M
3300027006\|Ga0209896_1010418	Not Available	1001	Open in IMG/M
3300027526\|Ga0209968_1026130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300027657\|Ga0256865_1226978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300027722\|Ga0209819_10271260	Not Available	587	Open in IMG/M
3300027875\|Ga0209283_10521176	Not Available	762	Open in IMG/M
3300030006\|Ga0299907_11088542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300030606\|Ga0299906_10125043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2044	Open in IMG/M
3300031231\|Ga0170824_101335896	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Pluteineae → Amanitaceae → Amanita → Amanita muscaria → Amanita muscaria Koide BX008	536	Open in IMG/M
3300031538\|Ga0310888_10485197	Not Available	737	Open in IMG/M
3300031720\|Ga0307469_12119415	Not Available	547	Open in IMG/M
3300031740\|Ga0307468_100060345	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300032012\|Ga0310902_10975455	Not Available	587	Open in IMG/M
3300032174\|Ga0307470_10298639	Not Available	1091	Open in IMG/M
3300032211\|Ga0310896_10628850	Not Available	602	Open in IMG/M
3300032770\|Ga0335085_12199763	Not Available	554	Open in IMG/M
3300032828\|Ga0335080_11286262	Not Available	731	Open in IMG/M
3300033417\|Ga0214471_10185091	Not Available	1712	Open in IMG/M
3300033419\|Ga0316601_102586774	Not Available	510	Open in IMG/M
3300034149\|Ga0364929_0229268	Not Available	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.48%
Host-Associated	Host-Associated	17.59%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	17.59%
Aquatic	Environmental → Aquatic	14.81%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.48%
Marine	Environmental → Aquatic → Marine	5.56%
Sediment	Environmental → Aquatic → Sediment	5.56%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Roots	Host-Associated → Plants → Roots	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.41%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.41%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025002	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 2 (SPAdes)	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_02761080	2170459016	Switchgrass, Maize And Mischanthus Litter	MPQNAVQKFIAATRALFAAEAEPVRRWEKMRPRASQ
ICChiseqgaiiFebDRAFT_145800791	3300000363	Soil	MSALKKFIDSARKLHAEEADPAKRWEKMTPLLQELIADPAVKEQ
JGI11643J12802_118722252	3300000890	Soil	MSQSAMQRFIDSTRELFAAETDPVKRWAKMPPLLRELL
JGI10216J12902_1056334812	3300000956	Soil	MSAVQKFIASARQLHAEEKDAAKRWEKMTPLLQELLADPSIK
Ga0055467_101148992	3300003996	Natural And Restored Wetlands	MSQSAVQKFIVSTRDLFAAEADPARRWERMPPLLQELLADPSIKEQAK
Ga0055439_100361562	3300004019	Natural And Restored Wetlands	MSAVQKFIASARKLHAEETDPAKRWEKMTPLLQELLADPSVKEQSK
Ga0055488_100970001	3300004070	Natural And Restored Wetlands	MSAVQRFIASARKLHAEETDPAKRWEKMTPLLQELIADPAVREQSKQWPD
Ga0062591_1000880573	3300004643	Soil	MSALKKFIDSARKLHAEEADPAKRWEKMTPLLQELIADPAVKEQS
Ga0062383_101174741	3300004778	Wetland Sediment	MMSKEVPMSAVKKFIDSARKIHAEETDPAKRWEKMTPLLQ
Ga0068995_101190312	3300005206	Natural And Restored Wetlands	MNAVQKFIVSARKLHAEEKDAVKRWEKMTPLLQELITDPAVREQ
Ga0065704_106241022	3300005289	Switchgrass Rhizosphere	MSQNAVQKFIGATRTLFATEADPAKRWEKMPPLLQELLADPWVKE
Ga0065707_103918482	3300005295	Switchgrass Rhizosphere	MSAVQKFIAAARKLHAEEKDPAIRWEKMTPLLQQLLADPS
Ga0066388_1045598652	3300005332	Tropical Forest Soil	MGALQKFIESARKLHAEEKNPAKRWEKMTPLLQELLADPSIGEQSKNWP
Ga0070668_1007537051	3300005347	Switchgrass Rhizosphere	MSQNAVQKFIGATRTLFATEADPAKRWEKMPPLLQELLAD
Ga0070703_101645782	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSQNAVQKFIVATRTLFATEADPAKRWEKMPPLLQELLADPWVK
Ga0070694_1019359101	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSKTAVTKFIAAARQLCAEEPDPATRWQKMTPLLQDLLAEPSVREQSKYWP
Ga0070696_1003581501	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSQNAVQKFIVATRTLCATEADPAKRWEKMPPLLQELLADPWVKEQS
Ga0066661_105333322	3300005554	Soil	MSVEPTSAVQKFIASARELHAEENDPAKRWEKMIPLLQQLLADPSV
Ga0066707_100098998	3300005556	Soil	MSVEPTSPVQKFIASARELHAGENGPAKRWEKMIPLLQQL
Ga0066691_101042171	3300005586	Soil	MSVEPTSPVQKFIASARELHAGENGPAKRWEKMIPLLQQLLADPSVKEQ
Ga0068859_1007388101	3300005617	Switchgrass Rhizosphere	MSQNAVQKFIVATRTLFATEADPAKRWEKMPPLLQELLADPWVKEQSRHW
Ga0066905_1020661321	3300005713	Tropical Forest Soil	MGALQKFIESARKLHAEEKSPAKRWEKMTPLLQELLADPSIREQSKSWPTCSQAER
Ga0066903_1057047772	3300005764	Tropical Forest Soil	MGALQKFIESARKLHAEERNPARRWEKMTPLLRELLADPSIREQSKSWPTCSQAERAQNLLF
Ga0068860_1004453191	3300005843	Switchgrass Rhizosphere	MSQNAVQKFIVATRTLFATEADPAKRWEKMPPLLQEL
Ga0081538_1000299719	3300005981	Tabebuia Heterophylla Rhizosphere	MSALQKFIDSARKLHAEENDPAKRWQKMTPLLQELLADPSIREQSKSWPTCSQADRAQ
Ga0066696_106226181	3300006032	Soil	MSQSAVQKFIDATRALFAVESDSAKRWQKMPPLLEELLANPALKEQSKTWPDCSQGS
Ga0097621_1022288752	3300006237	Miscanthus Rhizosphere	MSQNAVQKFIVATRTLFATEADPAKRWEKMPPLLQELLADPWVKEQSRHWP
Ga0075435_1015128721	3300007076	Populus Rhizosphere	MNAVQKFILSARKLHVEEKDAVKRWEKMTPLLQELIA
Ga0075435_1019483332	3300007076	Populus Rhizosphere	MSQTAVQKFVAATRTLFATETDPAKRWEKMPPLLQELLADPSV
Ga0099830_112889102	3300009088	Vadose Zone Soil	MPGSKSAVQSFIESARQLFAEEKDAAKRWEKMSPLLQVLL
Ga0075418_105581872	3300009100	Populus Rhizosphere	MNAVQKFILSARKLHAEEKDAAKRWEKMTPLLQELISDPAVKEQSKSWPACRQSD*
Ga0075418_117088982	3300009100	Populus Rhizosphere	MSAVQKFIDSARKLHAEEKDDAKRWEKMTPLLQELIADPAVKEQSKSWPACRQSDRAQ
Ga0075418_119280002	3300009100	Populus Rhizosphere	MSAVQKFIDSARKLHAEEKDAAKRWEKMTPLLQELIADPAVKEQSK
Ga0114129_103396633	3300009147	Populus Rhizosphere	MSAVQKFIDSARKLHAEEKDAAKRWEKMTPLLQELIADPAVKEQSKSW
Ga0105092_101885801	3300009157	Freshwater Sediment	MNALQKFIESARKLHAEEKDPAKRWEKMTPRLQELLADPSIREQSKSWPTCSQ
Ga0105242_119564341	3300009176	Miscanthus Rhizosphere	MSAVQRFIASARKVHAEESDPGKRWEKMTPLLQELIADPTVREQ
Ga0105242_123489612	3300009176	Miscanthus Rhizosphere	MSQSAVRKFIADARALFADESDPAKRWERLSPLLQELLADAS
Ga0105242_127949861	3300009176	Miscanthus Rhizosphere	MSKTAVTKFIAAARQLCAEEPDPATRWQKMTPLLQDLLAESSVREQSKYWPDCSQ
Ga0126374_100051551	3300009792	Tropical Forest Soil	MGALQKFIESARKLHAEEKSPAKRWEKMTPLLRELLAD
Ga0126304_104990311	3300010037	Serpentine Soil	MSAVQKFIASARELHAQETDPVKRWEKMTPLLQELISDPEVKEQSKHW
Ga0126380_114141232	3300010043	Tropical Forest Soil	MSGQSAVEKFIVSARRLHAEEQNPAKRWEKMTPLLQALLADPTVKEQSK
Ga0126372_100397124	3300010360	Tropical Forest Soil	MGALQKFIESVRKLHAEEKSPAKRWEKMTPLLRELLA
Ga0126372_127691621	3300010360	Tropical Forest Soil	MGALQKFIESARKLHAEEKSPAKRWEKMTPLLRELLADPSIREQSKSWPTCSQ
Ga0126379_112425332	3300010366	Tropical Forest Soil	MGALQKFIESARKLHAEERNPARRWEKMTPLLQEL
Ga0134125_127385451	3300010371	Terrestrial Soil	MPQSAVQKFIAATRALFAAEADPARRWEKLRPLLQELLADPAVKEQ
Ga0137351_10505392	3300012140	Soil	MSAVQTFIASARKLHAEEKDPAKRWEKMTPLLQELLADP
Ga0137334_11482062	3300012179	Soil	MGTETAVRKFIAAARKLHAEEEDAAKRWEKMTPLLQELLADA*
Ga0137378_115809262	3300012210	Vadose Zone Soil	MSQSAVQKFIDATRALFAVESDPAKRWQKMPSLLEELLANPAIK
Ga0137377_112550792	3300012211	Vadose Zone Soil	MSVEPTSAVQKFIASARELHAEENDPAKRWEKMIPLLQQLLADPSVKEQSTKWPDCS*
Ga0137366_103748552	3300012354	Vadose Zone Soil	MSVEPTSAVQKFIASARELHAEENDPAKRWEKMIPLLQQLLADPSVKEQSTKWPDCSQGGERAE
Ga0157331_10028141	3300012486	Soil	MSQSAVQKFIADARALFADESDPAKRWERMSPLLQELLADA
Ga0137358_100812413	3300012582	Vadose Zone Soil	MSHSAVQTFIDATRALFAVESDPAKRWQKMPPLLEEL
Ga0137394_113335752	3300012922	Vadose Zone Soil	MNAVQKFILSARKLHVEEKDAVKRWEKMTPLLQELIADPAVRE
Ga0137413_115382461	3300012924	Vadose Zone Soil	MSQSAVQKFIADARALFAVESDPAERWERMSPLLQ
Ga0137410_112916541	3300012944	Vadose Zone Soil	MSHSAVQTFIDATRALFAVESDPAKRWQKMPSLLEELL
Ga0126369_132734101	3300012971	Tropical Forest Soil	MGALQKFIESARKLHAEERNPARRWEKMTPLLRELLADPSIREQSGSWPTCSQAERA
Ga0075320_10492701	3300014255	Natural And Restored Wetlands	MSQSAVQRFIDSTRELFSAETDPVRRWEKMSPLLQELLADPSVKEQSKS
Ga0075327_10000761	3300014272	Natural And Restored Wetlands	MSQSAVQRFIDSTRELFSAETDPVRRWEKMSPLLQELLAD
Ga0075322_11800962	3300014311	Natural And Restored Wetlands	MSQFALKKFIASTRALFEQEADPASRWQKMTPILQELL
Ga0075343_11799521	3300014317	Natural And Restored Wetlands	MSQTAVQKFIEGARRLHADEKDDAKRWEKMAPLLQELLADPMVKEQSKRWPDCSQGSER
Ga0132257_1009425831	3300015373	Arabidopsis Rhizosphere	MSQSAVQKFIADARALFADESDPAKRWERMSPLLQELL
Ga0132255_1062000952	3300015374	Arabidopsis Rhizosphere	MPQSAVQKFIAATRVLFAAEADPARRWEKMRPLLQ
Ga0182033_108101751	3300016319	Soil	MSAVQKFIVSAGKLHAEEKDPAKRWKKMTALLQELLVDP
Ga0182039_101443603	3300016422	Soil	MSAVQRFIVSARKLHAEEKDSAKRWKKMTALLQELLVDPSL
Ga0134069_13135601	3300017654	Grasslands Soil	MSVEPTSAVQKFIASARELHAEENDPAKRWEKMIPLLQQLLADPSVKEQSTKWPDCS
Ga0184621_102663571	3300018054	Groundwater Sediment	MSAVQKFIASARQLHAEEKDAAKHWEKMTPLLQELLADPS
Ga0184637_103283162	3300018063	Groundwater Sediment	MSAVQKFIASARKLHAEENDPAKRWEKMIPLLQELLADPSVKEQSRNWPGCSQGGERAEN
Ga0184629_100760463	3300018084	Groundwater Sediment	MGSHSAVQKFIASARRLHAEERDSKKRWEKMTPLLQ
Ga0190265_128167361	3300018422	Soil	MSQPAVQKFIDSTRDLFAAETDPAKRWAKMPPLLQELLADPSLKEQSR
Ga0190268_101108782	3300018466	Soil	MSAVQKFIASARQLHAEETDPAKRWEKMTPLLEELIADP
Ga0190271_116184472	3300018481	Soil	MSAVQKFIASARQLHAEETDPATRWEKMTPLLEELIADPAVREQSKHW
Ga0193707_100052617	3300019881	Soil	MSHSAVQKFIDATRALFAVESDPAKRWQKMPSLLEELLANPAIKEQ
Ga0193755_10118611	3300020004	Soil	MSQSAVQKFIADARALFAVESDPAKRWEGMSPLLREL
Ga0193721_11391711	3300020018	Soil	MSHSAVQKFIDATRALFAVESDPAKRWQKMPSLLEELLAN
Ga0210408_114765061	3300021178	Soil	MSGSKTAVQNFIESARQLFAEENDPVKRWEKMSPLLQVLLADKSVKEQSRN
Ga0212128_100840101	3300022563	Thermal Springs	MAGPTAIQKFITRARQLHAAETNLSKRWEKMTPLLEDLLSDPSVKEQSKSW
Ga0222622_103144621	3300022756	Groundwater Sediment	MSALQKFIASARKLHAEEKDSAKRWQKMKPLLQELLADPSVKEQSRCWPDC
Ga0209001_10629692	3300025002	Soil	MAGQSAVQKFIASARQLHAEEKDPAKRWENLTPLLQELLADPLVKEQSTKWPDCSQ
Ga0209619_101069521	3300025159	Soil	MAGQSAVQKFIASARQLHAEEKDPAKRWENLTPLLQELLADPLVKEQSTKW
Ga0209521_104166861	3300025164	Soil	MGQQPAVQKFIASARALFAQEREPAARWRQMTPLLQELLADP
Ga0209520_106570402	3300025319	Soil	MGIQTAVQRFIASARQLHTEEKDPAKRWARMTPLLQELLADPAVKEQSTKWPDCSQGGEH
Ga0209751_105304651	3300025327	Soil	MAGQSAVQKFIASARQLHAEEKDPAKRWENLTPLLQELLADPLVKEQS
Ga0210076_11031531	3300025567	Natural And Restored Wetlands	MSQTAVQKFIEGARRLHADEKDDAKRWEKMAPLLQELLAD
Ga0207652_112982462	3300025921	Corn Rhizosphere	MSQSAVQKFIASTRALFAAEADPAKRWERMPPLLQELLADPSVKEQSKS
Ga0207704_111633911	3300025938	Miscanthus Rhizosphere	MSQSSVQKFIADARALFAVESDPAKRWERMSPLLQ
Ga0210070_10347521	3300025962	Natural And Restored Wetlands	MNAVQKFIVSARKLHAEEKDAVKRWEKMTPLLQELITDPAVREQSMSW
Ga0208291_10156574	3300026111	Natural And Restored Wetlands	MSQSAVQRFIDSTRELFSAETDPVRRWEKMSPLLQELLADP
Ga0209805_12338711	3300026542	Soil	MSVEPTSAVQKFIASARELHAEENDPAKRWEKMIPLLQQLLADPSVKEQSTKWPDCSQGGERAEN
Ga0209896_10104182	3300027006	Groundwater Sand	MNAVQKFIVSARKLHAEEKDAAKRWEKMIPVLQELIADPAVKEQSKSWPA
Ga0209968_10261301	3300027526	Arabidopsis Thaliana Rhizosphere	MSQSAVQKFIASTRDLFAAEADPARRWERMPPLLQELLADP
Ga0256865_12269781	3300027657	Soil	MSQSAVQKFIAAARDLFAAEADPAKRWEKMSPLLQELLADPSIQEQSKKWPDC
Ga0209819_102712601	3300027722	Freshwater Sediment	MSALQKFIESARKLHAEEKDPAKRWEKMTPRLQELLADP
Ga0209283_105211762	3300027875	Vadose Zone Soil	MPGSKTAFQSFIESARRLFAEEKDAAKRWEKMSPLLQVLLADESIKEQSKSWPGCSQGSDRA
Ga0299907_110885422	3300030006	Soil	MSQSAMQKFIDSTRDLFAAESDPAKRWAKMPPLLQELLADP
Ga0299906_101250434	3300030606	Soil	MSQSAVQKFIAAARDLFAAEADPAKRWEKMSPLLQELLADPS
Ga0170824_1013358961	3300031231	Forest Soil	VSARKLHAEEKDPAKRWEKMPPLLQELLADPSVKEQSNGWPTLW
Ga0310888_104851971	3300031538	Soil	MSQSAVQKFIADARALFAVESDPAKRWQRMSPLLQELLADASIRAQSKNWPNCSQGSERA
Ga0307469_121194152	3300031720	Hardwood Forest Soil	MSAVQKFIDSARKLHAEEKDAAKRWEKMTPLLQELIADPAVKEQSKRWPACRQSDRAQ
Ga0307468_1000603453	3300031740	Hardwood Forest Soil	MSGSKTAVQNFIESARGLFAEEKDPAKRWEKMSPLLQVLLADESLKEQSRNWP
Ga0326597_106446592	3300031965	Soil	MSSQTAVQRFIASARQLHAEEKEPAKRWQRMTPLLEELLADPLV
Ga0310902_109754552	3300032012	Soil	MNAVQKFIVSARKLHAEEKDASKRWEKMIPLLQELI
Ga0307470_102986391	3300032174	Hardwood Forest Soil	MNAVQKFILSARKLHVEEKDAVKRWEKMTPLLQELIADPTVREQSRSWP
Ga0310896_106288502	3300032211	Soil	MPQSAVQKFIAATRALFAAEADPVRRWEKMRPLLQELLADPAVKEESR
Ga0335085_121997631	3300032770	Soil	MPESKTAVQTFIESTRRLFAEEKDPAKRWAKMSPLLEVLLADESVKQQSKNWPGCAQGSDRAE
Ga0335080_112862621	3300032828	Soil	MPESKTAVQTFIESTRRLFAREQDPAKRWAKMSPLL
Ga0214471_101850911	3300033417	Soil	MSSQSAVQKFIASARSLHAEEKDAAKRWEKMTPHLQELLADPSV
Ga0316601_1025867741	3300033419	Soil	MSAVKKFIASARMLHAEEADPAKRWEKMTPLLQELIADPAV
Ga0364929_0229268_1_105	3300034149	Sediment	MSAVQKFIASARQLHAEEKDAAKRWEKMTPLLQEL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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