Basic Information | |
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Family ID | F090480 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 108 |
Average Sequence Length | 93 residues |
Representative Sequence | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Number of Associated Samples | 97 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 3.70 % |
% of genes near scaffold ends (potentially truncated) | 49.07 % |
% of genes from short scaffolds (< 2000 bps) | 78.70 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.24 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (54.630 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (12.963 % of family members) |
Environment Ontology (ENVO) | Unclassified (27.778 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (40.741 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 17.07% β-sheet: 13.01% Coil/Unstructured: 69.92% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.24 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 108 Family Scaffolds |
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PF00975 | Thioesterase | 14.81 |
PF07452 | CHRD | 9.26 |
PF01476 | LysM | 6.48 |
PF12697 | Abhydrolase_6 | 1.85 |
PF01546 | Peptidase_M20 | 1.85 |
PF01494 | FAD_binding_3 | 0.93 |
PF04909 | Amidohydro_2 | 0.93 |
PF00160 | Pro_isomerase | 0.93 |
COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
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COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.85 |
COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.93 |
COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.93 |
COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | Posttranslational modification, protein turnover, chaperones [O] | 0.93 |
COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 54.63 % |
All Organisms | root | All Organisms | 45.37 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300002244|JGI24742J22300_10116031 | Not Available | 526 | Open in IMG/M |
3300003995|Ga0055438_10038986 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1183 | Open in IMG/M |
3300004020|Ga0055440_10005436 | Not Available | 2111 | Open in IMG/M |
3300004025|Ga0055433_10066217 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 765 | Open in IMG/M |
3300004052|Ga0055490_10179208 | All Organisms → cellular organisms → Bacteria | 634 | Open in IMG/M |
3300004156|Ga0062589_100033390 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2660 | Open in IMG/M |
3300004156|Ga0062589_100077461 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2011 | Open in IMG/M |
3300004157|Ga0062590_100081394 | All Organisms → cellular organisms → Bacteria | 1964 | Open in IMG/M |
3300004157|Ga0062590_100106331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1794 | Open in IMG/M |
3300004463|Ga0063356_102065630 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 864 | Open in IMG/M |
3300004463|Ga0063356_103538614 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 673 | Open in IMG/M |
3300004643|Ga0062591_102085772 | Not Available | 587 | Open in IMG/M |
3300005093|Ga0062594_100014927 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3012 | Open in IMG/M |
3300005093|Ga0062594_100339887 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1171 | Open in IMG/M |
3300005159|Ga0066808_1005770 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1043 | Open in IMG/M |
3300005162|Ga0066814_10003510 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1544 | Open in IMG/M |
3300005290|Ga0065712_10097346 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2147 | Open in IMG/M |
3300005293|Ga0065715_10197936 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1377 | Open in IMG/M |
3300005331|Ga0070670_100583877 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 999 | Open in IMG/M |
3300005332|Ga0066388_101139092 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1326 | Open in IMG/M |
3300005332|Ga0066388_101818651 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1084 | Open in IMG/M |
3300005332|Ga0066388_101973889 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1045 | Open in IMG/M |
3300005332|Ga0066388_108174458 | Not Available | 522 | Open in IMG/M |
3300005334|Ga0068869_100087229 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2341 | Open in IMG/M |
3300005335|Ga0070666_10657985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 767 | Open in IMG/M |
3300005343|Ga0070687_101300046 | Not Available | 540 | Open in IMG/M |
3300005444|Ga0070694_100974914 | Not Available | 703 | Open in IMG/M |
3300005455|Ga0070663_100011368 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 5585 | Open in IMG/M |
3300005458|Ga0070681_10435109 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1224 | Open in IMG/M |
3300005459|Ga0068867_101121897 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 719 | Open in IMG/M |
3300005549|Ga0070704_102284658 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. 117 | 503 | Open in IMG/M |
3300005764|Ga0066903_104950231 | Not Available | 707 | Open in IMG/M |
3300005843|Ga0068860_101056414 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 831 | Open in IMG/M |
3300005937|Ga0081455_10000036 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 136303 | Open in IMG/M |
3300006048|Ga0075363_100798824 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 574 | Open in IMG/M |
3300006353|Ga0075370_10374676 | Not Available | 852 | Open in IMG/M |
3300006581|Ga0074048_12742824 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1165 | Open in IMG/M |
3300006881|Ga0068865_100837898 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 796 | Open in IMG/M |
3300009094|Ga0111539_10026368 | All Organisms → cellular organisms → Bacteria | 7106 | Open in IMG/M |
3300009100|Ga0075418_11851099 | Not Available | 657 | Open in IMG/M |
3300009101|Ga0105247_10643416 | Not Available | 791 | Open in IMG/M |
3300010046|Ga0126384_10355443 | Not Available | 1222 | Open in IMG/M |
3300010047|Ga0126382_10009815 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 4538 | Open in IMG/M |
3300010359|Ga0126376_10441165 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1186 | Open in IMG/M |
3300010362|Ga0126377_10116294 | Not Available | 2464 | Open in IMG/M |
3300010373|Ga0134128_10620161 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1203 | Open in IMG/M |
3300010400|Ga0134122_10188097 | All Organisms → cellular organisms → Bacteria | 1705 | Open in IMG/M |
3300010400|Ga0134122_10201526 | Not Available | 1651 | Open in IMG/M |
3300010403|Ga0134123_11526737 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 713 | Open in IMG/M |
3300012501|Ga0157351_1011064 | Not Available | 829 | Open in IMG/M |
3300012508|Ga0157315_1063903 | Not Available | 525 | Open in IMG/M |
3300012514|Ga0157330_1023727 | Not Available | 721 | Open in IMG/M |
3300012897|Ga0157285_10314983 | Not Available | 537 | Open in IMG/M |
3300012898|Ga0157293_10107179 | Not Available | 730 | Open in IMG/M |
3300012907|Ga0157283_10001639 | All Organisms → cellular organisms → Bacteria | 3179 | Open in IMG/M |
3300012943|Ga0164241_11353606 | Not Available | 525 | Open in IMG/M |
3300012948|Ga0126375_10005500 | All Organisms → cellular organisms → Bacteria | 4861 | Open in IMG/M |
3300012985|Ga0164308_11183789 | Not Available | 689 | Open in IMG/M |
3300014308|Ga0075354_1009792 | Not Available | 1370 | Open in IMG/M |
3300014318|Ga0075351_1165753 | Not Available | 537 | Open in IMG/M |
3300014320|Ga0075342_1092010 | Not Available | 782 | Open in IMG/M |
3300015371|Ga0132258_12853940 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1202 | Open in IMG/M |
3300015374|Ga0132255_100224542 | Not Available | 2671 | Open in IMG/M |
3300015374|Ga0132255_102165390 | Not Available | 848 | Open in IMG/M |
3300019356|Ga0173481_10004772 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3579 | Open in IMG/M |
3300022737|Ga0247747_1003026 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1605 | Open in IMG/M |
3300022889|Ga0247785_1015791 | Not Available | 810 | Open in IMG/M |
3300022889|Ga0247785_1050639 | Not Available | 524 | Open in IMG/M |
3300022915|Ga0247790_10007216 | Not Available | 2200 | Open in IMG/M |
3300023261|Ga0247796_1007282 | Not Available | 1531 | Open in IMG/M |
3300025271|Ga0207666_1001748 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2578 | Open in IMG/M |
3300025521|Ga0210083_1030902 | Not Available | 778 | Open in IMG/M |
3300025549|Ga0210094_1003130 | Not Available | 2394 | Open in IMG/M |
3300025912|Ga0207707_10667656 | Not Available | 875 | Open in IMG/M |
3300025917|Ga0207660_11014951 | Not Available | 676 | Open in IMG/M |
3300025919|Ga0207657_11238576 | Not Available | 566 | Open in IMG/M |
3300025925|Ga0207650_10401945 | Not Available | 1134 | Open in IMG/M |
3300025930|Ga0207701_10809918 | Not Available | 788 | Open in IMG/M |
3300025942|Ga0207689_10052350 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3364 | Open in IMG/M |
3300026035|Ga0207703_12320629 | Not Available | 512 | Open in IMG/M |
3300026054|Ga0208659_1014305 | Not Available | 602 | Open in IMG/M |
3300026741|Ga0207510_103726 | Not Available | 540 | Open in IMG/M |
3300026753|Ga0207528_101178 | Not Available | 822 | Open in IMG/M |
3300026787|Ga0207633_103855 | Not Available | 537 | Open in IMG/M |
3300026807|Ga0207547_102647 | Not Available | 724 | Open in IMG/M |
3300026853|Ga0207443_1011476 | Not Available | 522 | Open in IMG/M |
3300027397|Ga0207463_101256 | Not Available | 769 | Open in IMG/M |
3300027401|Ga0208637_1012621 | Not Available | 875 | Open in IMG/M |
3300027435|Ga0207553_1007012 | Not Available | 581 | Open in IMG/M |
3300027560|Ga0207981_1002450 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3324 | Open in IMG/M |
3300027682|Ga0209971_1108860 | Not Available | 679 | Open in IMG/M |
3300027717|Ga0209998_10071999 | Not Available | 827 | Open in IMG/M |
3300027876|Ga0209974_10218473 | Not Available | 709 | Open in IMG/M |
3300028381|Ga0268264_11626195 | Not Available | 657 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1020061 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1374 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10023109 | All Organisms → cellular organisms → Bacteria | 1602 | Open in IMG/M |
3300031226|Ga0307497_10489637 | Not Available | 605 | Open in IMG/M |
3300031716|Ga0310813_10002343 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 11472 | Open in IMG/M |
3300031720|Ga0307469_10523931 | Not Available | 1044 | Open in IMG/M |
3300031820|Ga0307473_10965422 | Not Available | 620 | Open in IMG/M |
3300031847|Ga0310907_10254862 | Not Available | 865 | Open in IMG/M |
3300032000|Ga0310903_10477894 | Not Available | 647 | Open in IMG/M |
3300032012|Ga0310902_10000245 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462 | 14099 | Open in IMG/M |
3300032013|Ga0310906_10065219 | Not Available | 1863 | Open in IMG/M |
3300032013|Ga0310906_10696054 | Not Available | 709 | Open in IMG/M |
3300032205|Ga0307472_101982576 | Not Available | 583 | Open in IMG/M |
3300032211|Ga0310896_10355787 | Not Available | 771 | Open in IMG/M |
3300033004|Ga0335084_10087041 | All Organisms → cellular organisms → Bacteria | 3242 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 12.96% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.33% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 5.56% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 5.56% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.63% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.63% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.63% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 4.63% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 4.63% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.70% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 3.70% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.70% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.78% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.78% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.78% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.78% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.78% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.85% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.85% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 1.85% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.85% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.85% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.93% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.93% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.93% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002244 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 | Host-Associated | Open in IMG/M |
3300003995 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 | Environmental | Open in IMG/M |
3300004020 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 | Environmental | Open in IMG/M |
3300004025 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300004052 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005159 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPB | Environmental | Open in IMG/M |
3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
3300006353 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Host-Associated | Open in IMG/M |
3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012501 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610 | Environmental | Open in IMG/M |
3300012508 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510 | Host-Associated | Open in IMG/M |
3300012514 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510 | Environmental | Open in IMG/M |
3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
3300012943 | Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300014308 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 | Environmental | Open in IMG/M |
3300014318 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd | Environmental | Open in IMG/M |
3300014320 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300022737 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5 | Environmental | Open in IMG/M |
3300022889 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4 | Environmental | Open in IMG/M |
3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
3300023261 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6 | Environmental | Open in IMG/M |
3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025521 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025549 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026054 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes) | Environmental | Open in IMG/M |
3300026741 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-C (SPAdes) | Environmental | Open in IMG/M |
3300026753 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-12 (SPAdes) | Environmental | Open in IMG/M |
3300026787 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09K5-12 (SPAdes) | Environmental | Open in IMG/M |
3300026807 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes) | Environmental | Open in IMG/M |
3300026853 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5w-12 (SPAdes) | Environmental | Open in IMG/M |
3300027397 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-11 (SPAdes) | Environmental | Open in IMG/M |
3300027401 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes) | Environmental | Open in IMG/M |
3300027435 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K3-12 (SPAdes) | Environmental | Open in IMG/M |
3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
3300032000 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3 | Environmental | Open in IMG/M |
3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24742J22300_101160312 | 3300002244 | Corn, Switchgrass And Miscanthus Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMV |
Ga0055438_100389861 | 3300003995 | Natural And Restored Wetlands | GCEMNKIIACVVLAAAFGFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0055440_100054364 | 3300004020 | Natural And Restored Wetlands | MNKIIACVVLAAAFGFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0055433_100662172 | 3300004025 | Natural And Restored Wetlands | FSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0055490_101792082 | 3300004052 | Natural And Restored Wetlands | MNKIIACVVLAAAFGFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLY |
Ga0062589_1000333903 | 3300004156 | Soil | MNKIIACIVFATASGFSLAAATAMPLVPIVTEQAGPTIPVADGCGFNRYRDARGICRKKYVINRHRAPQPLYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0062589_1000774612 | 3300004156 | Soil | MTKMIACIALAAAVALPIADTKAMPLAPIGTGQAALALPVADGCGINRYRDARGICRKKYVINRHQGPQPFYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0062590_1000813943 | 3300004157 | Soil | MTKMIACIALAAALALPIADTKAMPLAPIGTGQAALALPVADGCGINRYRDARGICRKKYVINRHQGPQPFYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0062590_1001063312 | 3300004157 | Soil | MNKIIACIVFATASGFSLAAATAMPLVPIVKEQAGPTIPVADGCGFNRYRDARGICRKKYVINRHRAPQPLYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0063356_1020656301 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTKMFFCIVLASSSVLSIVAARAMPFAPIGAEPVKLAIPVADGCGFNRYRDARGICRKKYVITRHRGRQPFYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0063356_1035386142 | 3300004463 | Arabidopsis Thaliana Rhizosphere | VGMNRIGFCVLFAAALCLSIVDAKAMPHAPIGTAWARLTVPAADGCGFNRYRDARGVCRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0062591_1020857722 | 3300004643 | Soil | MTKIFFCIVLASSSVLSIVAAKAMPFSPIGAEPLKLATPVADGCGFNRYRDARGICRKKYVMTRHRGRQPFYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0062594_1000149272 | 3300005093 | Soil | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0062594_1003398872 | 3300005093 | Soil | MTKIFFCIVLASSSVLSIVAAKAMPFSPIGAEPLKLATPVADGCGFNRYRDARGICRKKYVMTRHRGQQPFYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0066808_10057702 | 3300005159 | Soil | MNKKFACIVLAAASGFSLTVAKAMPLAPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0066814_100035102 | 3300005162 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0065712_100973463 | 3300005290 | Miscanthus Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0065715_101979364 | 3300005293 | Miscanthus Rhizosphere | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLN |
Ga0070670_1005838771 | 3300005331 | Switchgrass Rhizosphere | VVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0066388_1011390923 | 3300005332 | Tropical Forest Soil | MTKMIACSALAAAFGLSIACAKALPLAPVSNGEVALPIPVADGCGFNRHRDARGICRKKYVITRHQGRQPFYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0066388_1018186512 | 3300005332 | Tropical Forest Soil | MTKILICIALVAMSGLLIAGARAMPLTSIGVGQVALAIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0066388_1019738892 | 3300005332 | Tropical Forest Soil | MTKMIACIALAAASGLSIAGAKGMPLSPISMGQAALAVPVADGCGFNRYRDARGICRKKYVITRHQGRQPFYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0066388_1081744582 | 3300005332 | Tropical Forest Soil | RISTGRKMTKLMTCIALAATSGLLIVGATAMPLAPVASGQAALAIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0068869_1000872292 | 3300005334 | Miscanthus Rhizosphere | MNKIITCIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0070666_106579851 | 3300005335 | Switchgrass Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCN |
Ga0070687_1013000461 | 3300005343 | Switchgrass Rhizosphere | KMNKIIACIVFATASGFSLAAATAMPLVPIVKEQAGPTIPVADGCGFNRYRDARGICRKKYVINRHRAPQPLYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0070694_1009749142 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MFFFIVLASSSVLSIVAAKAVPFAPIGAEPVKLASPVADGCGFNRYRDARGICRKKYVMTRHRGQQPFYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0070663_1000113681 | 3300005455 | Corn Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQC |
Ga0070681_104351091 | 3300005458 | Corn Rhizosphere | IVGMNRIGFCVLFAAALCLSIVDAKAMPHAPIGTAWARLTVPAADGCGFNRYRDARGVCRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0068867_1011218972 | 3300005459 | Miscanthus Rhizosphere | GCAMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0070704_1022846581 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | VLASSSVLSIVAAKAVPFAPIGAEPVKLASPVADGCGFNRYRDARGICRKKYVMTRHRGQQPFYTGCGGLNSHRVCNLYGHCWM |
Ga0066903_1049502312 | 3300005764 | Tropical Forest Soil | MTKMIACIALAVVSSLSVVGAQAMPLAPPVSTAEAALAIPVADGCGFNRYRDARGICRKKYVITRHQGPQPFYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0068860_1010564142 | 3300005843 | Switchgrass Rhizosphere | SGFSLAAATAMPLVPIVKEQAGPTIPVADGCGFNRYRDARGICRKKYVINRHRAPQPLYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0081455_1000003691 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MTKLMTCIALAATSGLLIAGARAMPLTPIGAGQAALAIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0075363_1007988242 | 3300006048 | Populus Endosphere | GFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0075370_103746762 | 3300006353 | Populus Endosphere | CKMNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0074048_127428242 | 3300006581 | Soil | MNKKFACIVLAAASGFSLTVAKAMPLAPIGTEQARLTVPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0068865_1008378982 | 3300006881 | Miscanthus Rhizosphere | GFAMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0111539_100263684 | 3300009094 | Populus Rhizosphere | MIICIALAAASGLSVAGAKAMPLVPTGAERATLVIPIADGCGFNRYRDARGICRKKYVITRQQGRQPVYTGCGGINSHRVCNLYGHCWMVCD* |
Ga0075418_118510991 | 3300009100 | Populus Rhizosphere | MTCIALAATSKLLIVGATAMPLAPNATGKAALAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0105247_106434161 | 3300009101 | Switchgrass Rhizosphere | IVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0126384_103554432 | 3300010046 | Tropical Forest Soil | SIAGAKGMPLSPISMGQAALAVPVADGCGFNRYRDARGICRKKYVITRHQGRQPFYTGCGGVNSHRVCNLYGRCWMVCD* |
Ga0126382_100098153 | 3300010047 | Tropical Forest Soil | MTCIALAATSGLLIVGATAMPLAPVASGQAALAIPIADGCGFNRYRDARGICRKKYVVTRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0126376_104411653 | 3300010359 | Tropical Forest Soil | MTKMIACIALAAASGLSIAGAKGTPLSPISMGQAALAVPVADGCGFNRYRDARGICRKKYVITRHQGRQPFYTGCGGVNSHRVCNL |
Ga0126377_101162942 | 3300010362 | Tropical Forest Soil | LIVGATAMPLAPVASGQAALAIPVADGCGFNRYRDARGICRKKYVVTRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0134128_106201611 | 3300010373 | Terrestrial Soil | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHR |
Ga0134122_101880971 | 3300010400 | Terrestrial Soil | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADVCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNL |
Ga0134122_102015263 | 3300010400 | Terrestrial Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRLRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0134123_115267371 | 3300010403 | Terrestrial Soil | HPAIRNSVGCAMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0157351_10110642 | 3300012501 | Unplanted Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVMTRHQGRQPFYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0157315_10639031 | 3300012508 | Arabidopsis Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRDRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0157330_10237271 | 3300012514 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCW |
Ga0157285_103149831 | 3300012897 | Soil | VGFAMNKIIACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0157293_101071791 | 3300012898 | Soil | MVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0157283_100016396 | 3300012907 | Soil | VSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0164241_113536062 | 3300012943 | Soil | MNRVVFCIMFVVAPCLSMVDAKAMPHAPIATERARLTIPVADGCGFNRYRDARGVCRKKYVITRHQGRQPVYTGCG |
Ga0126375_100055007 | 3300012948 | Tropical Forest Soil | LTVGATAMPLAPVASGQAALAIPVADGCGFNRYRDARGICRKKYVVTRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD* |
Ga0164308_111837891 | 3300012985 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCDGY* |
Ga0075354_10097923 | 3300014308 | Natural And Restored Wetlands | MNKIIACAVLAAEFGFSFTIAKAMPLVPIGMEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHWGRQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0075351_11657531 | 3300014318 | Natural And Restored Wetlands | MNKIIACAVLAAEFGFSFTIAKAMPLVPIGMEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHWGRKPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0075342_10920101 | 3300014320 | Natural And Restored Wetlands | MNKIIACVVLAAAFSFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0132258_128539403 | 3300015371 | Arabidopsis Rhizosphere | MNRIIACIVLAAAFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0132255_1002245423 | 3300015374 | Arabidopsis Rhizosphere | MNKKFACIVLAAASGFSLTVAKAMPLVPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD* |
Ga0132255_1021653902 | 3300015374 | Arabidopsis Rhizosphere | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQISLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD* |
Ga0173481_100047726 | 3300019356 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0247747_10030264 | 3300022737 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0247785_10157912 | 3300022889 | Soil | KMNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0247785_10506391 | 3300022889 | Soil | HPAIRNSVGCAMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0247790_100072161 | 3300022915 | Soil | IRNSVGFAMNKIIACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0247796_10072823 | 3300023261 | Soil | YHPAIRNSVGFAMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207666_10017485 | 3300025271 | Corn, Switchgrass And Miscanthus Rhizosphere | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVC |
Ga0210083_10309022 | 3300025521 | Natural And Restored Wetlands | MNKIIACAVLAAEFGFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQPGRQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0210094_10031303 | 3300025549 | Natural And Restored Wetlands | MNKIIACVVLAAAFGFSFTIAKAMPLVPIGMEQARLAIPVADGCGFNRYRDPRGICRKKYVITRQRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207707_106676562 | 3300025912 | Corn Rhizosphere | IVGMNRIGFCVLFAAALCLSIVDAKAMPHAPIGTAWARLTVPAADGCGFNRYRDARGVCRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD |
Ga0207660_110149512 | 3300025917 | Corn Rhizosphere | MTKMLFCIVLASSSVLSIVAAEAVPFAPIGAESVKLASPVADGCGFNRYRDARGICRKKYVMTRHRGQQPFYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0207657_112385762 | 3300025919 | Corn Rhizosphere | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMV |
Ga0207650_104019452 | 3300025925 | Switchgrass Rhizosphere | VVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207701_108099182 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | QDTAGRYHLAVRKSVGYEMNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207689_100523505 | 3300025942 | Miscanthus Rhizosphere | MNKIITCIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207703_123206291 | 3300026035 | Switchgrass Rhizosphere | CIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRDRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0208659_10143052 | 3300026054 | Natural And Restored Wetlands | MNKIIACAVLAAEFGFSFTIAKAMPLVPIGMEQAGLAIPVADGCGFNRYRDARGICRKKYVITRHWGRQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207510_1037262 | 3300026741 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNL |
Ga0207528_1011781 | 3300026753 | Soil | FTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0207633_1038551 | 3300026787 | Soil | NKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0207547_1026472 | 3300026807 | Soil | MNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNS |
Ga0207443_10114761 | 3300026853 | Soil | QGAAGRYHSAIRCSVDCKMNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0207463_1012561 | 3300027397 | Soil | VDCKMNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0208637_10126212 | 3300027401 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGQCWMVCD |
Ga0207553_10070121 | 3300027435 | Soil | TVGRYHPAIRNSVGFAMNKIIACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0207981_10024505 | 3300027560 | Soil | MNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0209971_11088602 | 3300027682 | Arabidopsis Thaliana Rhizosphere | IACIVLAVVSGFSFTVARAMPLAPICTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0209998_100719991 | 3300027717 | Arabidopsis Thaliana Rhizosphere | MFFCIVLASSSVLSIVAARAMPFAPIGAEPVKLAIPVADGCGFNRYRDARGICRKKYVITRHRGRQPFYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0209974_102184731 | 3300027876 | Arabidopsis Thaliana Rhizosphere | MNKVFALGLLAAVIGLPIGAAEAMPLAPIGAEQARLAIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVC |
Ga0268264_116261951 | 3300028381 | Switchgrass Rhizosphere | IACIVFATASGFSLAAATAMPLVPIVKEQAGPTIPVADGCGFNRYRDARGICRKKYVINRHRAPQPLYTGCGGVNSHRVCNLYGRCWMVCD |
(restricted) Ga0255311_10200611 | 3300031150 | Sandy Soil | MDKEQQATIILRNRNATGRKMTKMFFCIVLTLSSGFSIAAAKAIPVAPIGAEPAKLATPVADGCGFNRYRDARGICRKKYAITRHRGRQPFYTGCGGLNSHRVCNLYGQCWMVCD |
(restricted) Ga0255310_100231091 | 3300031197 | Sandy Soil | MNKIIACIALAVVSGFSFTVARAMPLAPIWTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0307497_104896371 | 3300031226 | Soil | MNKIIACIALAVVSGFSFTVARAMPLAPIWTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310813_100023438 | 3300031716 | Soil | MNKIIACIVLAAAFGFSFTFSFTNAKAMPLAPIGTEHAGPAIPVADGCGFNRYRDARGICRKKYVITRHPGRRPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0307469_105239312 | 3300031720 | Hardwood Forest Soil | MTKLMTCIALAATSGLLIVGATAMPLAPIATGQAALAIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD |
Ga0307473_109654221 | 3300031820 | Hardwood Forest Soil | MNKIFACIVFTATSGFSFAVATAMPLVPMGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310907_102548621 | 3300031847 | Soil | MNKKFASIVLAAASGFSLTVAKAMPLAPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310903_104778941 | 3300032000 | Soil | RNLAGRKMNKKFAYIVLAAASGFSLTVAKAMPLAPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310902_100002451 | 3300032012 | Soil | MNKKFACIVLAAASGFSLTVAKAMPLAPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310906_100652193 | 3300032013 | Soil | GRKMNKKFACIVLAAASGFSLTVAKAMPLAPIGTEQARLTVPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLNSHRVCNLYGHCWMVCD |
Ga0310906_106960541 | 3300032013 | Soil | MNKKFAYIVLAAASGFSLTVAKAMPLAPIGTEQARLTIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGLN |
Ga0307472_1019825761 | 3300032205 | Hardwood Forest Soil | MTKLMTCIALAATSGLLIVDATAMPLAPVATGQAALAIPVADGCGFNRYRDARGICRKKYVITRHQGRQPVYTGCGGVNSHRVCNLYGHCWMVCD |
Ga0310896_103557871 | 3300032211 | Soil | AMNKIIACIVLAVVSGFSFTVARAMPLAPIWTEQAGLTIPVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
Ga0335084_100870415 | 3300033004 | Soil | MNKIIACIVLAAVFGFSFTLAKAMPIVPIGTEQAGLAILVADGCGFNRYRDARGICRKKYVITRHRGPQPFYTGCGGLNSHRVCNLYGQCWMVCD |
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