Metagenome / Metatranscriptome Family F090285

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090285
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	56 residues
Representative Sequence	VNAELPPARDSQSKSPEWHERQKSRERIKLIGLLVIALLILLIAFLRFGKTIPWGAR
Number of Associated Samples	78
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.44 %
% of genes near scaffold ends (potentially truncated)	8.33 %
% of genes from short scaffolds (< 2000 bps)	76.85 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.148 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (14.815 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01715	IPPT	32.41
PF13103	TonB_2	29.63
PF01745	IPT	12.04
PF03544	TonB_C	6.48
PF00933	Glyco_hydro_3	2.78
PF00009	GTP_EFTU	2.78
PF09106	SelB-wing_2	1.85
PF14714	KH_dom-like	0.93
PF03144	GTP_EFTU_D2	0.93
PF13207	AAA_17	0.93
PF00011	HSP20	0.93
PF01609	DDE_Tnp_1	0.93
PF00155	Aminotran_1_2	0.93
PF00156	Pribosyltran	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	32.41
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	6.48
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	2.78
COG3276	Selenocysteine-specific translation elongation factor SelB	Translation, ribosomal structure and biogenesis [J]	1.85
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.26 %
Unclassified	root	N/A	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	52.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.26 %
Unclassified	root	N/A	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	52.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.26 %
Unclassified	root	N/A	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	51.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.26 %
Unclassified	root	N/A	1.85 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	20.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.26 %
Unclassified	root	N/A	1.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	17.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.26 %
Unclassified	root	N/A	1.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104061163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	569	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105019698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300003218\|JGI26339J46600_10063622	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300003369\|JGI24140J50213_10079605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300003369\|JGI24140J50213_10270965	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300004091\|Ga0062387_100843316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	687	Open in IMG/M
3300004091\|Ga0062387_100891056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	672	Open in IMG/M
3300004152\|Ga0062386_100002880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11733	Open in IMG/M
3300004152\|Ga0062386_100131889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1939	Open in IMG/M
3300004152\|Ga0062386_101020767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	685	Open in IMG/M
3300004268\|Ga0066398_10178986	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300005602\|Ga0070762_11147715	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300005995\|Ga0066790_10253094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	751	Open in IMG/M
3300006052\|Ga0075029_100201411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1243	Open in IMG/M
3300006055\|Ga0097691_1000168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	59362	Open in IMG/M
3300006055\|Ga0097691_1035362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1902	Open in IMG/M
3300006086\|Ga0075019_10646156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300006642\|Ga0075521_10000646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10538	Open in IMG/M
3300006642\|Ga0075521_10396996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	671	Open in IMG/M
3300006642\|Ga0075521_10437809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	638	Open in IMG/M
3300006642\|Ga0075521_10499678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	596	Open in IMG/M
3300009525\|Ga0116220_10056616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1638	Open in IMG/M
3300009698\|Ga0116216_10522427	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300009826\|Ga0123355_10315268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2114	Open in IMG/M
3300010048\|Ga0126373_10366151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1458	Open in IMG/M
3300010048\|Ga0126373_10958365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	920	Open in IMG/M
3300010048\|Ga0126373_11412151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	762	Open in IMG/M
3300010358\|Ga0126370_10669061	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300010359\|Ga0126376_11500122	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300010361\|Ga0126378_10037569	All Organisms → cellular organisms → Bacteria → Acidobacteria	4403	Open in IMG/M
3300010361\|Ga0126378_11455157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	776	Open in IMG/M
3300010361\|Ga0126378_13056569	Not Available	533	Open in IMG/M
3300010361\|Ga0126378_13160435	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300010362\|Ga0126377_12992782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	545	Open in IMG/M
3300010366\|Ga0126379_10183321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1993	Open in IMG/M
3300010376\|Ga0126381_100305140	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300010376\|Ga0126381_103379391	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300010880\|Ga0126350_11743920	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300014200\|Ga0181526_10088252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1979	Open in IMG/M
3300015371\|Ga0132258_10937562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2186	Open in IMG/M
3300016294\|Ga0182041_10158955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1754	Open in IMG/M
3300016319\|Ga0182033_10796603	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300016387\|Ga0182040_10213729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1426	Open in IMG/M
3300016422\|Ga0182039_11239879	Not Available	674	Open in IMG/M
3300020579\|Ga0210407_11184602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	575	Open in IMG/M
3300021405\|Ga0210387_11011492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300021407\|Ga0210383_10011157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7632	Open in IMG/M
3300021560\|Ga0126371_10598527	All Organisms → cellular organisms → Bacteria → Proteobacteria	1251	Open in IMG/M
3300021560\|Ga0126371_13763063	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300025427\|Ga0208077_1009861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1370	Open in IMG/M
3300025484\|Ga0208587_1041653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1176	Open in IMG/M
3300025509\|Ga0208848_1062469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	782	Open in IMG/M
3300025579\|Ga0207927_1012323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2835	Open in IMG/M
3300025579\|Ga0207927_1024319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1805	Open in IMG/M
3300025619\|Ga0207926_1058928	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300026294\|Ga0209839_10203551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	635	Open in IMG/M
3300027654\|Ga0209799_1139624	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300027812\|Ga0209656_10003348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10375	Open in IMG/M
3300027812\|Ga0209656_10023112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3777	Open in IMG/M
3300027812\|Ga0209656_10050239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2359	Open in IMG/M
3300027812\|Ga0209656_10132355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300027824\|Ga0209040_10245110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	902	Open in IMG/M
3300027889\|Ga0209380_10017567	All Organisms → cellular organisms → Bacteria → Acidobacteria	4061	Open in IMG/M
3300027894\|Ga0209068_10814842	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300028649\|Ga0302162_10075371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	771	Open in IMG/M
3300028868\|Ga0302163_10081135	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300028869\|Ga0302263_10089466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300029980\|Ga0302298_10274681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	559	Open in IMG/M
3300029987\|Ga0311334_10097179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2166	Open in IMG/M
3300029987\|Ga0311334_10176690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1624	Open in IMG/M
3300029989\|Ga0311365_10391370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1202	Open in IMG/M
3300029990\|Ga0311336_10027069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4400	Open in IMG/M
3300029995\|Ga0302210_10005471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4745	Open in IMG/M
3300030003\|Ga0302172_10063569	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300031232\|Ga0302323_100011855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7370	Open in IMG/M
3300031232\|Ga0302323_101635741	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031521\|Ga0311364_11416973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	687	Open in IMG/M
3300031545\|Ga0318541_10145543	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300031546\|Ga0318538_10040369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2237	Open in IMG/M
3300031573\|Ga0310915_10100300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1956	Open in IMG/M
3300031681\|Ga0318572_10297100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	954	Open in IMG/M
3300031681\|Ga0318572_10838033	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031726\|Ga0302321_100295407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1731	Open in IMG/M
3300031726\|Ga0302321_100742841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300031792\|Ga0318529_10624492	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300031819\|Ga0318568_10361355	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300031833\|Ga0310917_10448933	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031879\|Ga0306919_10214048	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300031879\|Ga0306919_10820085	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031890\|Ga0306925_10034024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5227	Open in IMG/M
3300031890\|Ga0306925_10133921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2660	Open in IMG/M
3300031902\|Ga0302322_101853953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	739	Open in IMG/M
3300031912\|Ga0306921_10154570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2685	Open in IMG/M
3300031954\|Ga0306926_10602523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300032076\|Ga0306924_11112580	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300032160\|Ga0311301_10620742	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300032205\|Ga0307472_100822012	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300032261\|Ga0306920_103537478	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032261\|Ga0306920_104257098	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300032770\|Ga0335085_10057120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5235	Open in IMG/M
3300032782\|Ga0335082_10267997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1587	Open in IMG/M
3300032782\|Ga0335082_11274924	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300032783\|Ga0335079_10238112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2006	Open in IMG/M
3300032829\|Ga0335070_10010958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10607	Open in IMG/M
3300032829\|Ga0335070_10187360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2070	Open in IMG/M
3300032954\|Ga0335083_10288701	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300032954\|Ga0335083_10461920	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300033289\|Ga0310914_10617207	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.26%
Aquatic	Environmental → Aquatic	13.89%
Arthropoda	Host-Associated → Arthropoda	0.93%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.44%
Peat	Environmental → Terrestrial → Peat	14.81%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Sediment	Environmental → Aquatic → Sediment	2.78%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.26%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	14.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1040611632	3300000364	Soil	VSAELPSARDPHSKSADWYERQKSRERVKLVGLLVIALLILLIALVRFGKTIPWGAR*
INPhiseqgaiiFebDRAFT_1050196982	3300000364	Soil	VSAELPSSRDQQSKSPEWYERQNARDRVKLIGLIAIALLILLIAFLRLGKTIPWGAR*
JGI26339J46600_100636222	3300003218	Bog Forest Soil	VAPELPAPDEQQSRSPEWYERQKSRERAKLTGILILALVILLIAFLRFGKTIPWGAR*
JGI24140J50213_100796052	3300003369	Arctic Peat Soil	VAPEPPASREQQPRTSDWYERQKSREPMKLTGLVILALVILLIAFLRFGKTIPWGAR*
JGI24140J50213_102709651	3300003369	Arctic Peat Soil	VASGPPPSREQQPRTPEWYERQKSRERLKLTGLLVLALVILLIAFVRFGKTIPWGAR*
Ga0062387_1008433162	3300004091	Bog Forest Soil	VNAELPPARDPHSKSPDWHERQKSRERVKLIGLLAIALLILLIAFFRFGRTIPWGAR*
Ga0062387_1008910562	3300004091	Bog Forest Soil	VELGSPESREHQTRTPEWYERQKSRERVKLTGLLILALIILVIAFVRFGKTIPWGAR*
Ga0062386_10000288010	3300004152	Bog Forest Soil	VELGSPESREQQTRSPEWYERQKSRERVKLTGLLLLALIILLIAFVRFGKTIPWGAR*
Ga0062386_1001318892	3300004152	Bog Forest Soil	VNAELPSTRDSQSKTPEWYERQKSRERVKLIGLLAIALLILLIAFFRFGKTIPWGAR*
Ga0062386_1010207672	3300004152	Bog Forest Soil	VSADLPSPSDSPSKPPEWYERQKLAERIKLIGLLALAVIILLIAFLRFGLTIPWGAR*
Ga0066398_101789862	3300004268	Tropical Forest Soil	VSAELPCSRAQRSKSPEWYERQKSRERVKLIGLIAIALLTLLIALLRLGKTIPWGTR*
Ga0070762_111477151	3300005602	Soil	VDIGSPESREQQTRTPEWYERQKSRERVKLMGLLILAVIILLIAFVRFGRTIPWGAR*
Ga0066790_102530942	3300005995	Soil	VNAELPSARDQNSKTSEWYERQKSRERVKLVGLLVIGLLILLIAFLRFGKTIPWGAR*
Ga0075029_1002014112	3300006052	Watersheds	VSTGLPSSRNRIQKSADWYERQKSRERFKLIGLFTLALLILLIAFLRFGRTIPWGAR*
Ga0097691_100016837	3300006055	Arctic Peat Soil	VASEPPASREQQPQTPEWYERQKSRERMKLTGLLVLALVILLIAFVRFGKTIPWGAR*
Ga0097691_10353623	3300006055	Arctic Peat Soil	VATEPPASREQQLRTPEWYERQKSRERMKLTGLLILALVILLIAFVRFGKTIPWGAR*
Ga0075019_106461561	3300006086	Watersheds	VASEPPASREQQARTPEWYERQKSRERMKLTGLLVLALVILLIAFLRFGKTIPWGAR*
Ga0075521_100006464	3300006642	Arctic Peat Soil	VANEPPAAREQQTRTPEWYERQKSRERMKLTGLLILVLVILLIAFVRFGKTIPWGAG*
Ga0075521_103969962	3300006642	Arctic Peat Soil	VSANLPSRGPHSKTPEWHERQNSRERVKLVGLLVIALLILIIAFVRFGKTIPWGAR*
Ga0075521_104378092	3300006642	Arctic Peat Soil	VSAEPPSARDPHSKSPDWYERQKSRERVKLVGLLVIALLILLIGFVRFGKTIPWGAR*
Ga0075521_104996782	3300006642	Arctic Peat Soil	VPPDQPAARDRQSRTPEWYERQKSRERVKLTGLLIIALIILLIAFARFGKTIPWGAR*
Ga0116220_100566162	3300009525	Peatlands Soil	VNAELPSARDQQSKSREWYERQKLRERIKLVGLLVIALLILLIAFLRFGKTIPGSAQ*
Ga0116216_105224272	3300009698	Peatlands Soil	VNAELPSARDHHSKSREWYERQKLRERIKLVGLLVIALLILLIAFLRFGKTIPGSAQ*
Ga0123355_103152683	3300009826	Termite Gut	VNAELPSARDSRSKSPECYERQKSRERIKLVGLLVIALLILWVGFPRVGKTIPWGAR*
Ga0126373_103661512	3300010048	Tropical Forest Soil	VNAELPHPHDNKSRSSEWYERQKGGERLKLIGILVIALVILAIAFLRFGKTIPWGAR*
Ga0126373_109583652	3300010048	Tropical Forest Soil	VNAELPSFLDSRSKSPQWYERQKSREHIKLVGMLVFALLILLIGFLRFGKTIPWGAW*
Ga0126373_114121512	3300010048	Tropical Forest Soil	VNAELPSARDSRSQSLEGYERQKSREPIKLVGLLVIALFLLLIGFPRFGKTIPWGAR*
Ga0126370_106690611	3300010358	Tropical Forest Soil	MGGVSAELPSNRDPKGKSPEWYERQKSRELLKLIGILAIALLILLIGFLRFGKTIPW
Ga0126376_115001222	3300010359	Tropical Forest Soil	SRAQRSKSPEWYQRQKSRERVKLIGLIAIALLTLLIALLRLGKTIPWGTR*
Ga0126378_100375693	3300010361	Tropical Forest Soil	VSAELPSSRAQRSKSPEWYQRQKSRERVKLIGLIAIALLTLLIALLRLGKTIPWGTR*
Ga0126378_114551572	3300010361	Tropical Forest Soil	VNAELPSARDSRSQSFEGYERQKSREPIKLVGLLVIALFLLLIGFPRFGKTIPWGAR*
Ga0126378_130565691	3300010361	Tropical Forest Soil	VNAELPSPRDTQSRSPEWYERQKSRERIKLIGLLVIALLILLTAFLRFGKTIPWGAR*
Ga0126378_131604352	3300010361	Tropical Forest Soil	VNAQLPSTRDPESKSPEWYERQKSRERIKLTGILVIALLILLIAFLRFGKTIPWGAR*
Ga0126377_129927822	3300010362	Tropical Forest Soil	VSAELPSSRAQRSRSPEWYQRQKSRERVKLIGLIAIALLTLLIALLRLGKTIPWGTR*
Ga0126379_101833213	3300010366	Tropical Forest Soil	MGGVSAELPSNRDPKGKSPEWYERQKSRERLKLIGILAIALLILLIGFLRFGKTIPWGAR
Ga0126381_1003051403	3300010376	Tropical Forest Soil	VNAELPSARDSRSKSPAWYERQKSPERIKLVGLLAIALLILLIGFLRFGKTIPWGAR*
Ga0126381_1033793912	3300010376	Tropical Forest Soil	VNAERPSARDSRSKYLQWYERQKSRERINLVGLLVIALLILLIGFLRFGKTIPWGAR*
Ga0126350_117439201	3300010880	Boreal Forest Soil	VDIGSPEPREQQSRTPEWYERQKSRERVKLTGLLILALIILAIAFVRFG
Ga0181526_100882522	3300014200	Bog	VSAELPTPRDQQSKSPEWYERQKSRERIKLIGLLAIALLVLLIAFVRFGKTIPWGAR*
Ga0132258_109375623	3300015371	Arabidopsis Rhizosphere	VALEPPAPRDQPSRSSEWYERQKSRERIKLIGLLVVAFIILIIAFVRFGRTIPWGAR*
Ga0182041_101589552	3300016294	Soil	VKAELPSARDSRSKSPAWCERQKSHERIKLVGLLGIALLLLLISFLRFGNTIPWGAR
Ga0182033_107966032	3300016319	Soil	VNAELPPARDSQSKPPAWYERQKSRERIKLIGLLVIALLILLVAFLRFGKTIPWGAR
Ga0182040_102137292	3300016387	Soil	VNFELPSARDSQSKPSAWCERQKLRERIKLVGLLGIALLLLLISFLRFGNTIPWGAR
Ga0182039_112398791	3300016422	Soil	VNAELPSAHDSRSKSPEWYERQKSRERNKLIGLLVIALLILLIAFVRFGKTIPWGAR
Ga0210407_111846022	3300020579	Soil	VDIGSPESHEQQSRTPEWYERQKSRERLKLTGLLIIALLTLLIAFVRFGKTIPRGAR
Ga0210387_110114922	3300021405	Soil	VDIGSPEPRDKLTRTPEWYERQKSHERVKLTGLLILALIILIIAFVRFGRTIPWGAR
Ga0210383_100111578	3300021407	Soil	VSAELLSPRDQQSKSPEWYERQKSRERIKLIGLLAIALLILLIAFARFGKTIPWGAR
Ga0126371_105985273	3300021560	Tropical Forest Soil	VNPELPPGQDLQSKSPEWYERQKSRERIKLIGLLVIALLILLVAFLRFGKTIPWGAR
Ga0126371_137630631	3300021560	Tropical Forest Soil	VSAGFPTSRDANSKSEEWYERQKSRERVKLIGLLAAAILILLIALVRFGRTIPWGAR
Ga0208077_10098612	3300025427	Arctic Peat Soil	VAPEPPASREQQPRTSDWYERQKSREPMKLTGLVILALVILLIAFLRFGKTIPWGAR
Ga0208587_10416532	3300025484	Arctic Peat Soil	VASEPPASREQQPQTPEWYERQKSRERMKLTGLLVLALVILLIAFVRFGKTIPWGAR
Ga0208848_10624692	3300025509	Arctic Peat Soil	VANEPPAAREQQTRTPEWYERQKSRERMKLTGLLILVLVILLIAFVRFGKTIPWGAR
Ga0207927_10123233	3300025579	Arctic Peat Soil	VATEPPASREQQLRTPEWYERQKSRERMKLTGLLILALVILLIAFVRFGKTIPWGAR
Ga0207927_10243192	3300025579	Arctic Peat Soil	VANEPPAAREQLPRTPEWYERQKSRERMKLTGLLILALVILIVAFVRFGKTIPWGAR
Ga0207926_10589282	3300025619	Arctic Peat Soil	VASGPPPSREQQPRTPEWYERQKSRERLKLTGLLVLALVILLIAFVRFGKTIPWGAR
Ga0209839_102035512	3300026294	Soil	VNAELPSARDQNSKTSEWYERQKSRERVKLVGLLVIGLLILLIAFLRFGKTIPWGAR
Ga0209799_11396241	3300027654	Tropical Forest Soil	VSAELPCSRAQRSKSPEWYERQKSRERVKLIGLIAIALLTLLIALLRLGKTIPWGTR
Ga0209656_100033488	3300027812	Bog Forest Soil	VELGSPESREQQTRSPEWYERQKSRERVKLTGLLLLALIILLIAFVRFGKTIPWGAR
Ga0209656_100231122	3300027812	Bog Forest Soil	VNAELPSTRDSQSKTPEWYERQKSRERVKLIGLLAIALLILLIAFFRFGKTIPWGAR
Ga0209656_100502392	3300027812	Bog Forest Soil	VAPELPAPDEQQSRSPEWYERQKSRERAKLTGILILALVILLIAFLRFGKTIPWGAR
Ga0209656_101323552	3300027812	Bog Forest Soil	VAAQQPPSRDPLTKSADWYERQKSRERIKLIGLLVIALVILIIAFVRFGRTIPWGAR
Ga0209040_102451102	3300027824	Bog Forest Soil	VNAELPSAHDQRSKSPAWYERQKLRERIKLIGLLVIALVILLIAFIRFGKTIPWGAR
Ga0209380_100175672	3300027889	Soil	VDIGSPESREQQTRTPEWYERQKSRERVKLMGLLILAVIILLIAFVRFGRTIPWGAR
Ga0209068_108148421	3300027894	Watersheds	VNADLPSSRDRSQKSQEWYERQKPRERLKLVGLLAIALVILFIAFLRFGHTIPWGAR
Ga0302162_100753712	3300028649	Fen	VNANLPSARGPSSKTPEWQERQNSRERVKLVGLLVIALLILIIAFVRFGRTIPWGAR
Ga0302163_100811352	3300028868	Fen	VNANLPSARGPSSKTPEWQERQNSRERVKLVGLLVIALLILIIAFVRFGRTIPWGA
Ga0302263_100894661	3300028869	Fen	VNANLPSARGPSSKTPEWQERQNSRERVKQVGLLVIALLILIIAFVRFGRTIPWGAR
Ga0302298_102746812	3300029980	Fen	VANEPPAAREQQPRTPEWYERQKSRERVKLTGLLILALLILLIAFVRFGKTIPWGAR
Ga0311334_100971792	3300029987	Fen	VSAELQTFRERIQKSEEWYARQKSRERLKLVGLLVIAAAILLIALVRFGKTIPWGAR
Ga0311334_101766902	3300029987	Fen	VAPDQPSLREQQPRTPEWYERQKSRERVKLTGLLILALLILLIAFVRFGKTIPWGAR
Ga0311365_103913702	3300029989	Fen	VAPDLPASREQQPRTPEWYARQKARERVKLTGLLILALLILLIAFVRFGKTIPWGAR
Ga0311336_100270693	3300029990	Fen	VSAELQTFRERIQKSEEWYERQKSRERLKLVGLLVIAAAILLIALVRFGKTIPWGAR
Ga0302210_100054715	3300029995	Fen	VSANLPSARGPSSKTPEWHERQNSRERVKLVGLLVIALLILIIAFVRFGRTIPWGAR
Ga0302172_100635691	3300030003	Fen	PAAREQQPRTPEWYERQKSRERVKLTGLLILALLILLIAFVRFGKTIPWGAR
Ga0302323_1000118551	3300031232	Fen	VNANLPSARGPSSKTPEWQERQNSRERVKLVGLLVIALLILIIAFVRF
Ga0302323_1016357412	3300031232	Fen	VAPDLPASREQQPRTPEWYARQKARERFKLTGLLILAVIILLIAFVRFGKTIPWGAR
Ga0311364_114169732	3300031521	Fen	VSAELQTFRERIQKSEEWYERQKSRERLKLVGLLVIAVAILLIALVRFGKTIPWGAR
Ga0318541_101455432	3300031545	Soil	VAPELLAPRDPHSKTPEWYQRQKSRERIRLIGLLVLALLILLIAFVR
Ga0318538_100403693	3300031546	Soil	VNAELPSARDSRSKSPAWCERQKSHERIKLVGLLGIALLLLLISFLRFGNTIPWGAR
Ga0310915_101003002	3300031573	Soil	VAPELLAPRDPHSKTPEWYQRQKSRERIRVIGLLVLALLILLIAFVRFGKTIPWGAR
Ga0318572_102971002	3300031681	Soil	VSADLPSVRDRVEKSEEWYERQKSRERLKLLGLLVIALAILAIAFLRFGKTIPWGAR
Ga0318572_108380332	3300031681	Soil	MSDVRNDLPAIRDRVEKSEEWYERQKSRERLKLVGLLVVALLILAIAFLRFGRTIPWGAR
Ga0302321_1002954072	3300031726	Fen	VNANLPSARGPSSKTPEWHERQNSRERVKLVGLLVIALLILIIAFVRFGRTIPWGAR
Ga0302321_1007428412	3300031726	Fen	VAPDQPSLREQQPRTPEWYERQKSRERVKLTGLLIVALLILLIAFLRFGKTIPWGAR
Ga0318529_106244921	3300031792	Soil	VNAELPPARDSQSKPPAWYERQKSRERIKLIGLLVIALLILLIGFLRFGKTIPWGAR
Ga0318568_103613552	3300031819	Soil	VNAELPSAHDSRSKSPEWYERQKSRERIKLIGLLVIALLILLVAFLRFGKTIPWGAR
Ga0310917_104489332	3300031833	Soil	VNAELPPARDSQSKPPAWYERQKSRERIKLIGFLRFGKTIP
Ga0306919_102140483	3300031879	Soil	VAPELPAPRDPHSKTPEWYQRQKSRERIRLIGLLVLALLILLIAFVRFGKTIPWGAR
Ga0306919_108200851	3300031879	Soil	VNAELPSAHDSRSKSPEWYERQKSRERIKLIGFLRFGKTIPWGAR
Ga0306925_100340243	3300031890	Soil	VAPELLAPRDPHSKTPEWYQRQKSRERIRLIGLLVLALLILLIAFVRFGKTIPWGAR
Ga0306925_101339212	3300031890	Soil	VNAELPSAHDSRSKSPEWYERQKSRERIKLIGLLVIALLILLIGFLRFGKTIPWGAR
Ga0302322_1018539532	3300031902	Fen	VSAELPTFRERIQKSEEWYERQKSRERLKLVGLLAIALLILLIALVRFGKTIPWGAR
Ga0306921_101545703	3300031912	Soil	VNAELPPARDSQSKPPAWYERQKSRERIKLIGFLRFGKTIPWGAR
Ga0306926_106025232	3300031954	Soil	VNAELPSAHDSRSKSPEWYERQKSRERLKLIGILVIALLILLVAFLRFGKTIPWGAR
Ga0306924_111125801	3300032076	Soil	ELLALRDPHSKTPEWYQRQKSRERIRLIGLLVLALLILLIAFVRFGKTIPWGAR
Ga0311301_106207421	3300032160	Peatlands Soil	VNAELPSARDQQSKSREWYERQTLRERIKLIGLLVIALLILLIAFLRFGKTIPGSAQ
Ga0307472_1008220122	3300032205	Hardwood Forest Soil	VSAGLPSSRDANSKSAEWYERQKLRERVKLIGLLALAILILVIALLRFGRTIPWGAR
Ga0306920_1035374781	3300032261	Soil	MSDVRNDLPAIRDRVEKSEEWYERQKSRERLKLVGLLVIAFLILAIAFLRFGKTIPWGAR
Ga0306920_1042570981	3300032261	Soil	VNSKFPSARDSRSKSPEWYERQKSRERNKLIGLLVIALLILLIAFVRFGKTIPWGAR
Ga0335085_100571203	3300032770	Soil	MAELPSSRGPAQKSAEWYERQKSRERIKLIGLLAIALLILLIAFLRFGKTIPWGAR
Ga0335082_102679972	3300032782	Soil	VALEPPAPRDQPSRSSEWYERQKSRERIKLIGLLIVAFIILIIAFVRFGKTIPWGAR
Ga0335082_112749241	3300032782	Soil	VSAELPSLRQQSKTPEWYEHQKSRERKKLVGLLVVALVILAIAFARFGKTIPWGAR
Ga0335079_102381122	3300032783	Soil	VNAELPSSRDSQSKSPEWYERQKSRERIKLIGLLVIALLILLIGWLRFGKTIPWGAR
Ga0335070_100109588	3300032829	Soil	VSGELPSRRDHVQKTSEWYERQKSRERVKLVGLLVVALVILAIALARFGKTIPWGAR
Ga0335070_101873603	3300032829	Soil	VNAELPPSRNRLQKSDEWYERQKSRERVKLIGLLAIALLILLIAFLRFGRTIPWGAR
Ga0335083_102887011	3300032954	Soil	VNAELPPARDSQSKSPEWHERQKSRERIKLIGLLVIALLILLIAFLRFGKTIPWGAR
Ga0335083_104619201	3300032954	Soil	VNAELPSSLDSSKSPEWYERQKSRERIKLIGLLVVALLTLLIGFLRFGKTIPWAAR
Ga0310914_106172072	3300033289	Soil	VNAELPSAHDSRSKSPEWYERQKSRERLKLIGLLVIALLILLVAFLRFGKTIPWGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090285

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences