Metagenome Family F090217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090217
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	49 residues
Representative Sequence	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Number of Associated Samples	71
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.81 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (62.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.815 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.80% β-sheet: 0.00% Coil/Unstructured: 10.20%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04392	ABC_sub_bind	7.41
PF00497	SBP_bac_3	4.63
PF08818	DUF1801	4.63
PF07731	Cu-oxidase_2	4.63
PF01557	FAA_hydrolase	3.70
PF04280	Tim44	3.70
PF13187	Fer4_9	2.78
PF09084	NMT1	1.85
PF00239	Resolvase	1.85
PF04828	GFA	1.85
PF03625	DUF302	1.85
PF03401	TctC	0.93
PF09334	tRNA-synt_1g	0.93
PF14437	MafB19-deam	0.93
PF03480	DctP	0.93
PF02371	Transposase_20	0.93
PF02313	Fumarate_red_D	0.93
PF00211	Guanylate_cyc	0.93
PF09361	Phasin_2	0.93
PF00672	HAMP	0.93
PF00313	CSD	0.93
PF11159	DUF2939	0.93
PF05231	MASE1	0.93
PF05973	Gp49	0.93
PF01047	MarR	0.93
PF14684	Tricorn_C1	0.93
PF12833	HTH_18	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.41
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	4.63
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	4.63
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	4.63
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	4.63
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	3.70
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.85
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	1.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.85
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.85
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG3080	Fumarate reductase subunit D	Energy production and conversion [C]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.93
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.93
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.93 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.67 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.15 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.11 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.93 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.26 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.85 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.04 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.93 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.93 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.93 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	0.93 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.04 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	0.93 %
Methylocystis sp. SC2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SC2	0.93 %
Methylobacterium sp. B34	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	0.93 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.93 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1050190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	747	Open in IMG/M
3300004633\|Ga0066395_10346381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	824	Open in IMG/M
3300004633\|Ga0066395_10400208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300005332\|Ga0066388_100071615	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300005332\|Ga0066388_100326631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2180	Open in IMG/M
3300005576\|Ga0066708_10545460	Not Available	747	Open in IMG/M
3300005764\|Ga0066903_101275461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1370	Open in IMG/M
3300005764\|Ga0066903_102383777	Not Available	1023	Open in IMG/M
3300005764\|Ga0066903_105121147	Not Available	694	Open in IMG/M
3300005764\|Ga0066903_105689489	Not Available	655	Open in IMG/M
3300005764\|Ga0066903_106796788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SC2	594	Open in IMG/M
3300005764\|Ga0066903_107208738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	575	Open in IMG/M
3300005764\|Ga0066903_108470878	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006046\|Ga0066652_101933547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	528	Open in IMG/M
3300006057\|Ga0075026_100265506	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300006755\|Ga0079222_11264231	Not Available	668	Open in IMG/M
3300010046\|Ga0126384_11821450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	578	Open in IMG/M
3300010358\|Ga0126370_10332340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300010359\|Ga0126376_10345270	Not Available	1317	Open in IMG/M
3300010359\|Ga0126376_10817838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	911	Open in IMG/M
3300010359\|Ga0126376_13108248	Not Available	513	Open in IMG/M
3300010360\|Ga0126372_10295910	Not Available	1419	Open in IMG/M
3300010360\|Ga0126372_11415821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	728	Open in IMG/M
3300010361\|Ga0126378_11463333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	774	Open in IMG/M
3300010366\|Ga0126379_10595156	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010366\|Ga0126379_12409465	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010366\|Ga0126379_12448184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300010366\|Ga0126379_12881845	Not Available	575	Open in IMG/M
3300010376\|Ga0126381_101612151	Not Available	938	Open in IMG/M
3300010398\|Ga0126383_11010747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	920	Open in IMG/M
3300010398\|Ga0126383_12244682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300012971\|Ga0126369_11011873	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300016270\|Ga0182036_10557110	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300016270\|Ga0182036_11729021	Not Available	528	Open in IMG/M
3300016294\|Ga0182041_12257558	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300016319\|Ga0182033_11734822	Not Available	566	Open in IMG/M
3300016319\|Ga0182033_12114804	Not Available	513	Open in IMG/M
3300016341\|Ga0182035_11005287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300016371\|Ga0182034_10989061	Not Available	726	Open in IMG/M
3300016371\|Ga0182034_11468866	Not Available	597	Open in IMG/M
3300016387\|Ga0182040_10496822	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300016387\|Ga0182040_10680668	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300016404\|Ga0182037_10033404	All Organisms → cellular organisms → Bacteria → Proteobacteria	3295	Open in IMG/M
3300016404\|Ga0182037_10715412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	858	Open in IMG/M
3300016404\|Ga0182037_11257118	Not Available	652	Open in IMG/M
3300016422\|Ga0182039_10133399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1895	Open in IMG/M
3300016422\|Ga0182039_10318341	Not Available	1295	Open in IMG/M
3300016445\|Ga0182038_10996952	Not Available	741	Open in IMG/M
3300017974\|Ga0187777_10732431	Not Available	703	Open in IMG/M
3300020579\|Ga0210407_10503604	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300021560\|Ga0126371_13560140	Not Available	526	Open in IMG/M
3300025929\|Ga0207664_11962389	Not Available	508	Open in IMG/M
3300027874\|Ga0209465_10300065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031474\|Ga0170818_102097219	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031544\|Ga0318534_10018585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3652	Open in IMG/M
3300031546\|Ga0318538_10489555	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300031549\|Ga0318571_10240866	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031561\|Ga0318528_10034212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2512	Open in IMG/M
3300031561\|Ga0318528_10049106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2129	Open in IMG/M
3300031679\|Ga0318561_10302980	Not Available	874	Open in IMG/M
3300031680\|Ga0318574_10219537	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300031719\|Ga0306917_10577888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	883	Open in IMG/M
3300031719\|Ga0306917_11517749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300031723\|Ga0318493_10310892	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300031747\|Ga0318502_10403939	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300031763\|Ga0318537_10004744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4419	Open in IMG/M
3300031764\|Ga0318535_10015392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2843	Open in IMG/M
3300031768\|Ga0318509_10059390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1974	Open in IMG/M
3300031771\|Ga0318546_10176811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300031778\|Ga0318498_10117852	Not Available	1207	Open in IMG/M
3300031778\|Ga0318498_10545730	Not Available	509	Open in IMG/M
3300031793\|Ga0318548_10117439	Not Available	1284	Open in IMG/M
3300031793\|Ga0318548_10675032	Not Available	501	Open in IMG/M
3300031794\|Ga0318503_10233120	Not Available	597	Open in IMG/M
3300031794\|Ga0318503_10268389	Not Available	554	Open in IMG/M
3300031819\|Ga0318568_10834019	Not Available	571	Open in IMG/M
3300031833\|Ga0310917_10085217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2009	Open in IMG/M
3300031835\|Ga0318517_10156439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1020	Open in IMG/M
3300031879\|Ga0306919_10130649	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300031879\|Ga0306919_10172224	Not Available	1593	Open in IMG/M
3300031879\|Ga0306919_10194682	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300031879\|Ga0306919_10344425	Not Available	1138	Open in IMG/M
3300031880\|Ga0318544_10044332	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300031890\|Ga0306925_10032243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5359	Open in IMG/M
3300031890\|Ga0306925_10862328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	934	Open in IMG/M
3300031893\|Ga0318536_10222056	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300031910\|Ga0306923_10044289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4879	Open in IMG/M
3300031912\|Ga0306921_12260502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031945\|Ga0310913_11050160	Not Available	570	Open in IMG/M
3300031946\|Ga0310910_10246564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1396	Open in IMG/M
3300031946\|Ga0310910_10579094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	890	Open in IMG/M
3300031954\|Ga0306926_10101813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3522	Open in IMG/M
3300031954\|Ga0306926_12666917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300032001\|Ga0306922_10056033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4089	Open in IMG/M
3300032001\|Ga0306922_11080663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300032009\|Ga0318563_10702608	Not Available	543	Open in IMG/M
3300032025\|Ga0318507_10368765	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300032039\|Ga0318559_10464184	Not Available	591	Open in IMG/M
3300032042\|Ga0318545_10362123	Not Available	522	Open in IMG/M
3300032044\|Ga0318558_10044737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1934	Open in IMG/M
3300032054\|Ga0318570_10414571	Not Available	614	Open in IMG/M
3300032059\|Ga0318533_10306088	Not Available	1154	Open in IMG/M
3300032076\|Ga0306924_11286354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300032076\|Ga0306924_12606383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300032261\|Ga0306920_100959153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.07%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.07%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10501901	3300000655	Forest Soil	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP*
Ga0066395_103463811	3300004633	Tropical Forest Soil	AILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP*
Ga0066395_104002081	3300004633	Tropical Forest Soil	AILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0066388_1000716158	3300005332	Tropical Forest Soil	LDKLLWLGAVFVALPSANLLLGMIPLIEFTIGVMIYGAGP*
Ga0066388_1003266311	3300005332	Tropical Forest Soil	LSLLAQQLIFPPLAVAAIVLARLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF*
Ga0066708_105454602	3300005576	Soil	VFAPLAVAAIVLAYLDRLLWLAALFVALPSANLLLGMIMFTIGIMIYGF*
Ga0066903_1012754611	3300005764	Tropical Forest Soil	AIVLAILDKLLWLGAVFVALPSANLLLGMIPMILFTIGVMIYGAAP*
Ga0066903_1023837772	3300005764	Tropical Forest Soil	LLAQQVIFGPLAVTAIVLAILDKFLWLGAVFVAVPSANLLMGIIPLIEFTIGVMIYGAAP
Ga0066903_1028720611	3300005764	Tropical Forest Soil	SVVGLSLFAEQLLFPALAAAAIVLAYLDRHLWLGAVFVALPPLNFLVSMVAFTIAVMIYGF*
Ga0066903_1051211471	3300005764	Tropical Forest Soil	LAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP*
Ga0066903_1056894891	3300005764	Tropical Forest Soil	PLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPMILFTIGVMIYGGPPNRPLFHL*
Ga0066903_1067967882	3300005764	Tropical Forest Soil	LGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0066903_1072087382	3300005764	Tropical Forest Soil	VLAILDKLLWLGTVFVALPSANLLLGMIPLIEFTIGVMIYGAGP*
Ga0066903_1084708781	3300005764	Tropical Forest Soil	IFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPIILFTIGVMIYGYGP*
Ga0066652_1019335472	3300006046	Soil	LGLMLLAQELVFAPLAVTAIVLAYLDRHLWLAALFVALPPANLLLGMIMFTIGIMIYGF*
Ga0075026_1002655061	3300006057	Watersheds	AYLDRHLWLAALFVALPPANLLLGMIMFTIGIMIYGF*
Ga0079222_112642312	3300006755	Agricultural Soil	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVIIYGAGP*
Ga0126384_118214502	3300010046	Tropical Forest Soil	DKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP*
Ga0126370_103323401	3300010358	Tropical Forest Soil	KLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126376_103452703	3300010359	Tropical Forest Soil	FGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126376_108178381	3300010359	Tropical Forest Soil	QLIFPPLAVAAIVLARLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF*
Ga0126376_131082482	3300010359	Tropical Forest Soil	FGPLAVSAIVLAILDKLLWSGAVFVALPSANLLLGMIPLIRFTIGVMIYGAAP*
Ga0126372_102959101	3300010360	Tropical Forest Soil	VLAILDKLLWLAAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126372_114158211	3300010360	Tropical Forest Soil	QVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPMILFTIGVMIYGAAP*
Ga0126378_114633332	3300010361	Tropical Forest Soil	GPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPMILFTIGVMIYGAAP*
Ga0126379_105951562	3300010366	Tropical Forest Soil	PLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126379_124094652	3300010366	Tropical Forest Soil	AILDKLLWLGAVFVALPSANLLLGMIPMILFTIGVMIYGAAP*
Ga0126379_124481841	3300010366	Tropical Forest Soil	IFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126379_128818452	3300010366	Tropical Forest Soil	FGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLIRFTIGVMIYGAAP*
Ga0126381_1016121512	3300010376	Tropical Forest Soil	LAQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANMLLGMLPIILFTIAVIISGRAAP
Ga0126383_110107473	3300010398	Tropical Forest Soil	LWLGAVFVALPSANLLLGMIPLILFTIAVIFSGRAAP*
Ga0126383_122446822	3300010398	Tropical Forest Soil	LAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0126369_110118731	3300012971	Tropical Forest Soil	ILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP*
Ga0182036_105571102	3300016270	Soil	IVLAILDKLLWLGAVFVALPSANLLLGMVPLILFTIGVMIYGAAP
Ga0182036_117290212	3300016270	Soil	AIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGTAP
Ga0182041_122575582	3300016294	Soil	WLGVVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0182033_117348221	3300016319	Soil	VLAILDKLLWLGAVFVALPSANLLLGMIPLIEFTIGNIIYGAGP
Ga0182033_121148041	3300016319	Soil	ILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAGP
Ga0182035_110052872	3300016341	Soil	AQQVIFGPLAVTAIVLAILDKLLWLGAGFVALPSANLLLGMIPLILFTIGVMIYGAGP
Ga0182034_109890612	3300016371	Soil	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLIEFTIGVMIYWAAP
Ga0182034_114688661	3300016371	Soil	QQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVIIYGAAP
Ga0182040_104968221	3300016387	Soil	LAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0182040_106806682	3300016387	Soil	DFALGGLSLLAQQVIFGPLAVTAIVLAILDKLLWLGAVFVAVPSANLLWGMIPLILFTMG
Ga0182037_100334048	3300016404	Soil	QVIFGPLAVTAIVLAILDKLLWLGAVFVAVPSANLLLGMIPLILFTIGVMIYGAAP
Ga0182037_107154122	3300016404	Soil	GPLAVTAIVLAVLDKLLWLGAVFVALPSPNLLLGMIPLILFTIGVIIYGAAP
Ga0182037_112571181	3300016404	Soil	IFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIAVIILGRAAP
Ga0182039_101333993	3300016422	Soil	AILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAGP
Ga0182039_103183411	3300016422	Soil	LLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAGP
Ga0182038_109969521	3300016445	Soil	AIVLAISDKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAAP
Ga0187777_101925161	3300017974	Tropical Peatland	QLIFPLLAVAAIVLARLDRHLWLGAIFVALPPTNLILGVIMFTIGIMIYGF
Ga0187777_107324312	3300017974	Tropical Peatland	SAQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGTIPLILFTIGVMIYGAAP
Ga0210407_105036042	3300020579	Soil	SLLGEELVFAPLAVTAIVLACLDRNLWLAALFVALPPANLLLGMIMFTIGIMIYGF
Ga0126371_135601402	3300021560	Tropical Forest Soil	FGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLIRFTIGVMIYGAAP
Ga0207664_119623891	3300025929	Agricultural Soil	VTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAGP
Ga0209465_103000651	3300027874	Tropical Forest Soil	LAILDKLLWLAAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0170818_1020972191	3300031474	Forest Soil	AIVLACLDRNLWLAALFVALPPANLLLGMIMFTIGIMIYGF
Ga0318534_100185855	3300031544	Soil	SLLAQQVIFGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAA
Ga0318538_104895551	3300031546	Soil	AQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318571_102408662	3300031549	Soil	IVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318528_100342124	3300031561	Soil	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318528_100491063	3300031561	Soil	IVLACLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0318561_103029802	3300031679	Soil	VTAIVLAILDKLLWLGAVFVAVPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318574_102195372	3300031680	Soil	AIVLAILDKLLWLGAVFVAVPSANLLLGMIPLILFTIGVMIYGAAP
Ga0306917_105778883	3300031719	Soil	KLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP
Ga0306917_115177492	3300031719	Soil	LDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0318493_103108921	3300031723	Soil	LLWLGAVFVAVPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318502_104039391	3300031747	Soil	LTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318537_100047445	3300031763	Soil	LALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318535_100153921	3300031764	Soil	FGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318509_100593903	3300031768	Soil	TAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318546_101768111	3300031771	Soil	LAQQLIFPPLAVAAIVLARLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0318498_101178521	3300031778	Soil	LSLLAQQVIFGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318498_105457302	3300031778	Soil	QQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318548_101174393	3300031793	Soil	VTAIVLAILDKLLWLAAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318548_106750322	3300031793	Soil	VLACLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0318503_102331202	3300031794	Soil	QQVIFGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318503_102683892	3300031794	Soil	LLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318568_108340192	3300031819	Soil	RLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0310917_100852171	3300031833	Soil	LSLLAQQVIFGLAAVTAIVLAILDKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAAPYAKLGAGKIV
Ga0318517_101564393	3300031835	Soil	VLARLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0306919_101306494	3300031879	Soil	LAQQVIFGPLAVTTIVLAILDKLLWLGAVFVALPSANLLLGMVPLILFTIGVMIYGAAP
Ga0306919_101722241	3300031879	Soil	GPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVIIYGAAP
Ga0306919_101946823	3300031879	Soil	AVTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0306919_103444252	3300031879	Soil	VTAIVLAISDKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAAP
Ga0318544_100443325	3300031880	Soil	LLWLAAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0306925_100322437	3300031890	Soil	LAVTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0306925_108623283	3300031890	Soil	AQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP
Ga0318536_102220562	3300031893	Soil	GPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0306923_100442897	3300031910	Soil	AIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0306921_122605021	3300031912	Soil	AQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0310913_110501602	3300031945	Soil	SLLAQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLFLGMIPIILSTIGVMIYGYG
Ga0310910_102465641	3300031946	Soil	DKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAAP
Ga0310910_105790942	3300031946	Soil	LAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP
Ga0306926_101018137	3300031954	Soil	LDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0306926_126669171	3300031954	Soil	VTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0306922_100560336	3300032001	Soil	SLLAQQVIFGLAAVTAIVLAISDKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAA
Ga0306922_110806631	3300032001	Soil	LAQQVIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0318563_107026081	3300032009	Soil	AVTAIVLAILDKLLWLGAVFVAVPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318507_103687651	3300032025	Soil	LLAQQVIFGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318559_104641842	3300032039	Soil	VTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318545_103621231	3300032042	Soil	SLLAQQVIFGPLAVTAIVLAILDKLLWLGAGFVALPSANLLLGMIPLILFTIGVMIYGAG
Ga0318558_100447371	3300032044	Soil	LAQQVIFGPLALTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP
Ga0318532_102441511	3300032051	Soil	LALLAQQLIFPPLAVAAIVLARLDKRLWLGAIFVALPSANLLLGVIIFTIAIMIYGF
Ga0318570_104145712	3300032054	Soil	VLAISDKLLWLGAVFVALPSAKLLLGMIPLILFTIGNIIYGAAP
Ga0318533_103060881	3300032059	Soil	FGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMIPLIEFTIGVMIYGAAP
Ga0306924_112863542	3300032076	Soil	IVLAILDKLLWLGAVFVALPSANLLLGMIPLILFTIGVMIYGGAP
Ga0306924_126063831	3300032076	Soil	VIFGPLAVTAIVLAILDKLLWLGAVFVALPSANLLLGMTPLILFTIGVMIYGAAP
Ga0306920_1009591531	3300032261	Soil	WLGAVFVALPSANLLLGMIPLILFTIGVMIYGAAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences