NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090212

Metagenome / Metatranscriptome Family F090212

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090212
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 99 residues
Representative Sequence PLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG
Number of Associated Samples 82
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.94 %
% of genes near scaffold ends (potentially truncated) 93.52 %
% of genes from short scaffolds (< 2000 bps) 86.11 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.148 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(46.296 % of family members)
Environment Ontology (ENVO) Unclassified
(67.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(70.370 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 5.26%    β-sheet: 26.32%    Coil/Unstructured: 68.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF13570PQQ_3 18.52
PF13360PQQ_2 12.04
PF00462Glutaredoxin 7.41
PF04185Phosphoesterase 4.63
PF01258zf-dskA_traR 2.78
PF04828GFA 1.85
PF13229Beta_helix 1.85
PF00535Glycos_transf_2 0.93
PF02036SCP2 0.93
PF07311Dodecin 0.93
PF01329Pterin_4a 0.93
PF01636APH 0.93
PF00528BPD_transp_1 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 4.63
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 2.78
COG3791Uncharacterized conserved proteinFunction unknown [S] 1.85
COG2154Pterin-4a-carbinolamine dehydrataseCoenzyme transport and metabolism [H] 0.93
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.15 %
UnclassifiedrootN/A1.85 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005166|Ga0066674_10026411All Organisms → cellular organisms → Bacteria2544Open in IMG/M
3300005166|Ga0066674_10549792All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300005178|Ga0066688_10347783All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300005178|Ga0066688_10541845All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300005179|Ga0066684_10575246All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium756Open in IMG/M
3300005181|Ga0066678_10857487All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium597Open in IMG/M
3300005186|Ga0066676_11156647All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium508Open in IMG/M
3300005447|Ga0066689_10226400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1143Open in IMG/M
3300005450|Ga0066682_10062560All Organisms → cellular organisms → Bacteria2282Open in IMG/M
3300005451|Ga0066681_10147035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1382Open in IMG/M
3300005451|Ga0066681_10608300All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300005536|Ga0070697_100780952All Organisms → cellular organisms → Bacteria → Proteobacteria845Open in IMG/M
3300005552|Ga0066701_10069677All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1989Open in IMG/M
3300005552|Ga0066701_10286290All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1021Open in IMG/M
3300005554|Ga0066661_10417800All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium822Open in IMG/M
3300005555|Ga0066692_10053744All Organisms → cellular organisms → Bacteria2248Open in IMG/M
3300005556|Ga0066707_10101467All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1767Open in IMG/M
3300005556|Ga0066707_10379658All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium922Open in IMG/M
3300005557|Ga0066704_10123187All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1721Open in IMG/M
3300005557|Ga0066704_10575074All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium729Open in IMG/M
3300005557|Ga0066704_10704676All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium636Open in IMG/M
3300005558|Ga0066698_10261108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1196Open in IMG/M
3300005558|Ga0066698_10275522All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1164Open in IMG/M
3300005558|Ga0066698_10625664All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium722Open in IMG/M
3300005561|Ga0066699_10911709All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium613Open in IMG/M
3300005568|Ga0066703_10838793All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium525Open in IMG/M
3300005569|Ga0066705_10294690All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1028Open in IMG/M
3300005569|Ga0066705_10965097All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005586|Ga0066691_10617804All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium644Open in IMG/M
3300005586|Ga0066691_10667261All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium616Open in IMG/M
3300005586|Ga0066691_10871154All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005598|Ga0066706_10242748All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300005598|Ga0066706_11364613All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005764|Ga0066903_104980976All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium705Open in IMG/M
3300006031|Ga0066651_10096357All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300006031|Ga0066651_10285089All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium879Open in IMG/M
3300006032|Ga0066696_10831267All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium589Open in IMG/M
3300006046|Ga0066652_100243121All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1572Open in IMG/M
3300006755|Ga0079222_12240555All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300006852|Ga0075433_11076233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium699Open in IMG/M
3300006852|Ga0075433_11684982All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300006903|Ga0075426_11476342All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium517Open in IMG/M
3300007076|Ga0075435_100835973All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium802Open in IMG/M
3300007255|Ga0099791_10531072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium572Open in IMG/M
3300009012|Ga0066710_100448964All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1933Open in IMG/M
3300009012|Ga0066710_100506212All Organisms → cellular organisms → Bacteria1821Open in IMG/M
3300009038|Ga0099829_11514779All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium554Open in IMG/M
3300009137|Ga0066709_100936898All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1264Open in IMG/M
3300009137|Ga0066709_104316107All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009147|Ga0114129_10470981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1645Open in IMG/M
3300010303|Ga0134082_10016081All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2724Open in IMG/M
3300010320|Ga0134109_10392383All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300010326|Ga0134065_10341721All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium585Open in IMG/M
3300010329|Ga0134111_10271450All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium701Open in IMG/M
3300010337|Ga0134062_10356437All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300012189|Ga0137388_12019148All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012189|Ga0137388_12041469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium501Open in IMG/M
3300012200|Ga0137382_10174868All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300012205|Ga0137362_11501382All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012208|Ga0137376_11659329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium530Open in IMG/M
3300012211|Ga0137377_10616879All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300012361|Ga0137360_11556905All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium566Open in IMG/M
3300012362|Ga0137361_10464272All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1163Open in IMG/M
3300012407|Ga0134050_1134690All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium611Open in IMG/M
3300012582|Ga0137358_10031069All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3504Open in IMG/M
3300012582|Ga0137358_10807732All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300012923|Ga0137359_10161012All Organisms → cellular organisms → Bacteria2002Open in IMG/M
3300012923|Ga0137359_11635858All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300012929|Ga0137404_10868197All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300012929|Ga0137404_11971730All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300012930|Ga0137407_11529891All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium635Open in IMG/M
3300012944|Ga0137410_10021277All Organisms → cellular organisms → Bacteria4466Open in IMG/M
3300012972|Ga0134077_10338617All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium639Open in IMG/M
3300012972|Ga0134077_10490333All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300014150|Ga0134081_10000363All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium9163Open in IMG/M
3300014154|Ga0134075_10469371All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300015245|Ga0137409_10130727All Organisms → cellular organisms → Bacteria2308Open in IMG/M
3300015357|Ga0134072_10378988All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300015358|Ga0134089_10284472All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium683Open in IMG/M
3300017656|Ga0134112_10116347All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300017659|Ga0134083_10048009All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300018431|Ga0066655_10517207All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium793Open in IMG/M
3300018433|Ga0066667_10209126All Organisms → cellular organisms → Bacteria1442Open in IMG/M
3300018433|Ga0066667_10452906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1048Open in IMG/M
3300018468|Ga0066662_11275220All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium750Open in IMG/M
3300019789|Ga0137408_1379986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1805Open in IMG/M
3300020170|Ga0179594_10366326All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium547Open in IMG/M
3300025905|Ga0207685_10090530All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1287Open in IMG/M
3300025910|Ga0207684_11566056All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium534Open in IMG/M
3300025922|Ga0207646_11765164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium530Open in IMG/M
3300026316|Ga0209155_1167796All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300026323|Ga0209472_1024289All Organisms → cellular organisms → Bacteria2848Open in IMG/M
3300026323|Ga0209472_1213501All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium638Open in IMG/M
3300026324|Ga0209470_1378399All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300026328|Ga0209802_1026709All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3084Open in IMG/M
3300026329|Ga0209375_1264930All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium569Open in IMG/M
3300026333|Ga0209158_1235612All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300026523|Ga0209808_1063666All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1635Open in IMG/M
3300026524|Ga0209690_1291872All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300026528|Ga0209378_1048524All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300026530|Ga0209807_1144661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria919Open in IMG/M
3300026537|Ga0209157_1061530All Organisms → cellular organisms → Bacteria1928Open in IMG/M
3300026548|Ga0209161_10028225All Organisms → cellular organisms → Bacteria3908Open in IMG/M
3300027748|Ga0209689_1101326All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300031720|Ga0307469_10147910All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300031720|Ga0307469_10807508All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium861Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil46.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil12.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066674_1002641113300005166SoilAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066674_1054979213300005166SoilGMDVGSDGTLYYAELNLNADTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGITVIDSSQVHVNFPRLAPAPEPSPTTCNGGG*
Ga0066688_1034778333300005178SoilLNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066688_1054184513300005178SoilNEYDANGVLVRNIVPTNMLKNPIGMDVGSDGTVYYAELNLNPDFSTGCGRVSMARFVGGTPQAPEILGKNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCNGEGSPSGAFIDGSPFAG*
Ga0066684_1057524623300005179SoilNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFVSGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG*
Ga0066678_1085748713300005181SoilGQGGGSIVEYDANGVVVQSIVENVPPGTLLNPLGIDVGSDGTLYFAELNLNADTSTGCGRTSMVRFVNGAPQAPQVLGQNLSFPDGVTVVDSSQVGVNFLRLPVAVEPDPSTCNGSG*
Ga0066676_1115664723300005186SoilGGGIINEYDANGVLVQTIAQNVPPGTLLNPLGMDVSSDGTLYFAELNLNPDTSTGCGRVSMVRFVGGAPQAPQVLGQNLSFPDGITVIDSSQVHVNFQRLAPAPEPSPTSCNGGG*
Ga0066689_1022640023300005447SoilDGTLYYAELNLNSDLSTGCGRVSMVQFVGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0066682_1006256033300005450SoilLVRNIVPSNMLKNPLGMDVGTDGTLYYAELNLNPDFSTGCGRVSMVRFVGGMPQAPEVLGRNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCSGGGGSPSGAFID*
Ga0066681_1014703513300005451SoilLNLNSDFSTGCGRVSMVRFVGGVPQAPQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG*
Ga0066681_1060830013300005451SoilDANGVLVQNIVQNVPPGTLLNPIGPDVGSDGTLYYAELNLDMQTSTGCGRVSMVRFVNGSPQAPEVRGQNLSFPDGVTVVDSSQIGVNFTRLPVAVEPAPSTCDGSG*
Ga0070697_10078095213300005536Corn, Switchgrass And Miscanthus RhizosphereGMDVGSDGTLYYAELNLNTDTSTGCGRVSMVRFVGGTPQAPQVLGKNLSFPDGVTVVDSKQLRVNFSRLPPAPEPAPSTCNGEGSPSGAFLN*
Ga0066701_1006967723300005552SoilVQNVPPGTLLNPLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0066701_1028629013300005552SoilTLYYAELNLNSDLSTGCGRVSMVRFVGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0066661_1041780013300005554SoilNIVPSNLLLNPLGMDVGSDGTLYYAELNLNSDTSTGCGRVSMVRFVNGIPQPPQVLGQNLSFPDGVTVVDSAQIGVDFMKLPVAVEPDPSTCNGSG*
Ga0066692_1005374483300005555SoilSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066707_1010146723300005556SoilPLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0066707_1037965823300005556SoilDGTLYYAELNLNPDFSTGCGRVSMVRFVGGMPQAPEVLGRNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCSGGGGSPSGAFID*
Ga0066704_1012318713300005557SoilGVVVQSIVENVPPGTLLNPLGIDVGSDGTLYYAELNLNADTSTGCGRTSMVQFINGAPQAPQVRGQNLSFPDGVTVVDSSQVGVNFLRLPVAVEPDPSTCNGSG*
Ga0066704_1057507423300005557SoilYYAELNLNSDLSTGCGRVSMVRFVSGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG*
Ga0066704_1070467613300005557SoilPPGTVKNPIGMAVGSDGTLYFAELNLNADFSTGCGRVSMVRFVGGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGEGSPSGAFIDRSAY*
Ga0066698_1026110823300005558SoilTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFVGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPRASEPDPSTCSGGG*
Ga0066698_1027552223300005558SoilSPTPAAIVRVPGTDRSYISSVLLPGVPGQGGGSIDEYDANGVLVQNIVQNVPPGTLLNPIGPDVGSDGTLYYAELNLDMQTSTGCGRVSMVRFVNGSPQAPEVLGQNLSFPDGVTVVDSSQIGVNFTRLPVAVEPAPSTCDGSG*
Ga0066698_1062566413300005558SoilMAVGSDGTLYFAELNLNPDLSTGCGRVSMIRFVGGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGEGSPSGAFIDRSAY*
Ga0066699_1091170913300005561SoilFVQTIVQNVPPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVQFVGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0066703_1083879313300005568SoilPGVPGTGGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066705_1029469013300005569SoilPTNMLKNPIGMDVGSDGTVYYAELNLNPDFSTGCGRVSMARFVGGTPQAPEILGKNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCNGEGSPSGAFIDGSPFAG*
Ga0066705_1096509713300005569SoilGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066691_1061780423300005586SoilPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGRTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0066691_1066726113300005586SoilPIGMAVGSDGTLYFAELNLNADLSTGCGRVSMIRFVGGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGEGSPSGAFIDRSAY*
Ga0066691_1087115413300005586SoilGIINEYDANGVLVRNIVPTNMLKNPIGMDVGSDGTVYYAELNLKPDFSTGCGRVSMARFVGGTPQAPEILGKNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCNGEGSPSGAFIDGYPFAG*
Ga0066706_1024274823300005598SoilELNLNPDTSTGCGRVSMVRFVGGTPEPPQVLGKNLSFPDGVTVMDSSRFRVDFLKLPPAPEPDPRTCNGGGGSPSGAFID*
Ga0066706_1136461313300005598SoilPGGIINEYDANGVLVRNIVPTNMLKNPIGMDVGSDGTVYYAELNLNPDFSTGCGRVSMARFVGGTPQAPEILGKNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCNGEGSPSGAFIDGSPFAG*
Ga0066903_10498097613300005764Tropical Forest SoilQLKNPLGMDVGSDGTLYYSELNLNADTSTGCGRMSQVRFVNGTPQAPEVLGQNLAFPDGVTVLDSSQLRIPITRLPPAPEPDPATCNGSG*
Ga0066651_1009635713300006031SoilTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0066651_1028508923300006031SoilLLNPLGIDVGSDGTLYYAELNLNADTSTGCGRTSMVQFVNGAPQAPQVLGQNLSFPDGVTVVDSSQIGVNFLRLPVAVEPDPSTCNGSG*
Ga0066696_1083126723300006032SoilPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFVSGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG*
Ga0066656_1082223813300006034SoilPGTDHWYVDSVLFPPVINEYDANGVFVRTIAPPGTVKNPIGMAVGSDGTLYFAELNLNADFSTGCGRVSMVRFVGGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGEGSPSGAFIDRSAY*
Ga0066652_10024312113300006046SoilGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0079222_1224055523300006755Agricultural SoilAVGSDGTLYYSELNLKADTSTGCGRVSMVQFVSGVPQAPKVLGQNLLFPDGVTVIDSSQLHVNFQKLPPAPQRDASACNGEGSPSGAFLD*
Ga0075433_1107623333300006852Populus RhizosphereIDSVLLPGVPGQGGGSIDEYDANGSFVRNIAPTAMLKNPLGMDVGSDGTLYFAELNLNMDTSTGCGRVSQVRFVNGTPQAPEVLGQNLSFPDGITVVDSSKLRVKFLRLPVAVEPDPSTCGGGG*
Ga0075433_1168498213300006852Populus RhizospherePGTLLNPLGMDVGSDGTLYFAELNLNPDTSTGCGRVSMVRFVGGAPQAPQVLGQNLSFPDGITVIDSSQVHANFQRLAPAPEPSPTSCNGGG*
Ga0075426_1147634223300006903Populus RhizosphereQLKNPLGMDVGSDGTLYYSELNLNADTSTGCGRVSQVRFVNGTPQAPQVLGQNLSFPDGVTVVDSSQIHYRITCLPPAPEPSAASCNGGG*
Ga0075435_10083597323300007076Populus RhizosphereMAVGSDGTLYYSELNLNADFSTGCGRVSMVRFVGGTPQPPQVLGQNLLFPDGVTVIDSSQLHVNFAHLPPAPQRDSSACSSESPSGAFLD*
Ga0099791_1053107223300007255Vadose Zone SoilANGALARSIVPPGMALNPIGLDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0066710_10044896413300009012Grasslands SoilNQLLNPLGMDVGSDGTLYYSELNLNADTSTGCGRVSMVRFANGQPQAPQVLGKNLLFPDGVTVVDSSQIHVNFLRLPVAVEPDPSTCNGSG
Ga0066710_10050621213300009012Grasslands SoilEYDANGLLVRNIVPSNMLLNPLGMDVGADGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQPPQVLGKNLSFPDGVTVMDSSRFRVDFLTLPPAPEPDPRTCNGGGGSPSGAFID
Ga0099829_1151477913300009038Vadose Zone SoilSVLLPGVPGQGGGSIVEYDANGVVVQSIVENVPPGTLLNPLGMDVGSDGTLYYAELNLNADTSTGCGRTSMVQFVNGAPQAPQVLGQNLSFPDGVTVVDSSQIGVDFLGLPVAVEPDPSTCNGSG*
Ga0066709_10093689813300009137Grasslands SoilPGTTHWYIDSVLLPGIPGQGGGIINEYDANGLLVRNIVPSNQLLNPLGMDVGSDGTLYYSELNLNADTSTGCGRVSMVRFANGQPQAPQVLGKNLLFPDGVTVVDSSQIHVNFLRLPVAVEPDPSTCNGSG*
Ga0066709_10431610713300009137Grasslands SoilANGVLVRNIVPSNMLLNPLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFAGGTPQPPEVLGKNLSFPDGVTVMDSSRFQVDFLKLPPAPEPDPRTCNGGGGSPSGAFID*
Ga0114129_1047098113300009147Populus RhizosphereGSIDEYDANGIFVRNIAPTAMLKNPLGMDVGSDGTLYFAALNLNMDTSTGCGRVSQVRFVNGTPQAPEVLGQNLSFPDGITVVDSSKLRVKFLRLPVAVEPDPSTCGGGG*
Ga0134082_1001608113300010303Grasslands SoilQNVPPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFVSGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG*
Ga0134109_1039238313300010320Grasslands SoilMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSTQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0134065_1034172123300010326Grasslands SoilVQTIVQNVPPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGGTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG*
Ga0134111_1027145013300010329Grasslands SoilMLKNPLGMDVGSDGTLYYAELNLNPDFSTGCGRVSMVRFVGGVPQAPQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG*
Ga0134062_1035643733300010337Grasslands SoilYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSCAFIDG*
Ga0137388_1201914813300012189Vadose Zone SoilVRTIAPAGTVKNPIGMAVGSDGTLYFAELNLNPDLSTGCGRVSMIRFVGGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGAASPSGAFIDGYAY*
Ga0137388_1204146913300012189Vadose Zone SoilTLYYSELNLNTDTSTGCGRVSMVRFVNGTPQAPQVLGQNLSFPDGITVIDSSQVHVNFLRLAPAPEPSPTTCNGSG*
Ga0137382_1017486853300012200Vadose Zone SoilVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0137362_1150138213300012205Vadose Zone SoilTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0137376_1165932913300012208Vadose Zone SoilPLGMDVGSDGTLYYAELNLNSDTSTGCGRVSMVRFVNGIPQPPQVLGQSLSFPDGVTVVDSAQIGVDFMKLPVAVEPDPSTCNGSG*
Ga0137377_1061687923300012211Vadose Zone SoilMWNDPCLDAHHNDAVEREPFRGRNGRDANGVFVRNIVQNVPPGTLLNPLGMDVGSDGTLYYAALNLNPDTSTGCGRVSMVRFAGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0137360_1155690523300012361Vadose Zone SoilSDGTLYYAELNLNADTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGITVIDSSQVHVNFQRLAPAPEPSPTTCNGGG*
Ga0137361_1046427213300012362Vadose Zone SoilTPAAIVRVPGTDHWYVSSVLLPGVPGQGGGSIVEYDANGVVVQSIVENVPPGTLLNPLGIDVGSDGTLYFAELNLNADTSTGCGRTSMVRFVNGAPQAPQVLGQNPSFPDGVTVVDSSQVGVNFLRLPVAVEPDPSTCNGSG*
Ga0134050_113469013300012407Grasslands SoilMGVGSDGTLYYAELNLNSDFSTGCGRVSMVRFVGGVPQAAQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG*
Ga0137358_10031069103300012582Vadose Zone SoilHWYIDSVLLPGVPGTGGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0137358_1080773213300012582Vadose Zone SoilVRVPGTDHWYVSSVLLPGVPGQGGGSIVEYDANGVVVQSIVENVPPGALLNPLGIDVGSDGTLYFAELNLNADTSTGCGRTSMVQFVNGAPQAPQVLGQNLSFPDGVTVVDSSQIGVNFLR*
Ga0137359_1016101233300012923Vadose Zone SoilLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0137359_1163585813300012923Vadose Zone SoilDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPQVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0137404_1086819713300012929Vadose Zone SoilGVLVRNIAPSNQLRNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG*
Ga0137404_1197173023300012929Vadose Zone SoilYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG*
Ga0137407_1152989123300012930Vadose Zone SoilGVLVRNIVPSNQLRNPLGMDVGSDGTLYYAELNLNSDTSTGCGRVSMVQFVGGTPQAPQVLGQNLSFPDGVAVVDSSQLRVDFTRLPPAPEPDPSTCSGGG*
Ga0137410_1002127753300012944Vadose Zone SoilLYYAELNLNPDASTGCGRVSMAQFVDGMPQAPQVLGKNLSFPDGVTVVDSTQLRVNFAKLPPAPEPSPSTCGGGG*
Ga0134077_1033861723300012972Grasslands SoilSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG*
Ga0134077_1049033323300012972Grasslands SoilLLNPLGMDVGSEGTLYYSELNLNSDTSTGCGRVSMVRFVDGTPLPPQVLGQNLLFPDGVTVVDSSRLRVNFLKLPPAPEPDPRTCNGGGGSPSGAFID*
Ga0134081_10000363133300014150Grasslands SoilNMLKNPLGMDVGTDGTLYYAELNLNPDFSTGCGRVSMVRFVGGMPQAPEVLGRNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCSGGGGSPSGAFID*
Ga0134075_1046937113300014154Grasslands SoilSNMLLNPLGMDVGADGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPEPPQVLGKNLSFPDGVTVMDSSRFRVDFLTLPPAPEPDPRTCNGGGGSPSGAFID*
Ga0137409_1013072713300015245Vadose Zone SoilDGTLYYAELNLNPDASTGCGRVSMAQFVDGMPQAPQVLGKNLSFPDGVTVVDSTQLRVNFAKLPPAPEPSPSTCGGGG*
Ga0134072_1037898813300015357Grasslands SoilYDANGVLVRNIVPSNMLKNPLGMDVGSDGTLYYAELNLNPDFSTGCGRVSMVRFVGGMPQAPEVLGRNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCSGGGGSPSGAFID*
Ga0134089_1028447213300015358Grasslands SoilGVPGTGGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG*
Ga0134112_1011634713300017656Grasslands SoilLLNPLGMDVGADGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQPPQVLGKNLSFPDGVTVMDSSRFRVDFLKLPPAPEPDPRTCNGGGGSPSGAFID
Ga0134083_1004800923300017659Grasslands SoilLLNPLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQPPQVLGKNLSFPDGVTVVDSSRLRVNFLKLPPAPEPDPRTCNGGGGSPSGAFID
Ga0066655_1051720723300018431Grasslands SoilGSIDEYDANGVLVQNIVQNVPPGTLLNPIGPDVGSDGTLYYAELNLDMQTSTGCGRVSMVRFVNGSPQAPEVLGQNLSFPDGVTVVDSSQIGVNFTRLPVAVEPAPSTCDGSG
Ga0066667_1020912613300018433Grasslands SoilGSDGTLYYAELNLNSDFSTGCGRVSMVRLVGGVPQAPQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG
Ga0066667_1045290623300018433Grasslands SoilSDGTLYYAELNLNSDLSTGCGRVSMVRFVGGMPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG
Ga0066662_1036586313300018468Grasslands SoilPGTDHWYIDSVLLPGVPGTGGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG
Ga0066662_1127522013300018468Grasslands SoilLFPPLINEYDANGVFVRTIAPPGTVKNPIGMAVGSDGTLYFAELNLNPDLSTGCGRVSMIRFVAGMPQPPELLGKNLSFPDGVTVVDSKQLKVNWAKLPPAPEPDPRSCNGEGSPSGAFIDRSAY
Ga0137408_137998613300019789Vadose Zone SoilVPPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFVSGVPQPPQVLGQNLSFPDGVTVVDSSQLRVNFTKLPRASEPAPSTCSGGG
Ga0179594_1036632613300020170Vadose Zone SoilVDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG
Ga0207685_1009053013300025905Corn, Switchgrass And Miscanthus RhizosphereSVLLPGVPGTGGGIINEYDANGVLVQTIAQNVPPGTLLNPLGMDVGSDGTLYFAELNLNPDTSTGCGRVSMVRFVGGAPQAPQVLGQNLSFPDGITVIDSSQVHVNFQRLAPAPEPSPTSCNGGG
Ga0207684_1156605623300025910Corn, Switchgrass And Miscanthus RhizosphereIGMDVGSDGTLYYAELNLNADTSTGCGRVSMVRFVNGTPQAPQILGQNLSFPDGVTVVDSTRLRVDITRLPPAPEPAPSTCNGGG
Ga0207646_1176516413300025922Corn, Switchgrass And Miscanthus RhizosphereGVVTPGAIVRVPGTDHWYIDSVFLPFTPGLGGGIINEYDANGLFVRNIVPSNQLKNPLGMDVGSDGTLYYSELNLNADTSTGCGRVSQVRFVNGTPQAPQVLGQNLSFPDGVTVVDSSQIRIPISRLPPAPEPDPATCNGGG
Ga0209155_116779623300026316SoilAELNLNADTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGITVIDSSQVHVNFPRLAPAPEPSPTTCNGGG
Ga0209472_102428933300026323SoilPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGGTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG
Ga0209472_121350113300026323SoilANGLFVRTIVQNVPPGTRLNPIGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSTQVHVNFLKLPPAPEPAPSTCNGGG
Ga0209470_137839913300026324SoilGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFID
Ga0209802_102670923300026328SoilMDVGSDGTLYYAELNLNADTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGITVIDSSQVHVNFQRLAPAPEPSPTTCNGGG
Ga0209375_126493013300026329SoilLYYAELNLNADTSTGCGRTSMVQFVNGAPQAPQVLGQNLSFPDGVTVVDSSQIGVNFLRLPVAVEPDPSTCNGSG
Ga0209158_123561223300026333SoilDGTLYYAELNLNSDLSTGCGRVSMVRFAGRTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG
Ga0209808_106366623300026523SoilPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGRTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG
Ga0209690_129187223300026524SoilANGVFVRNIVQNVPPGTLLNPLGMDVGSDGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG
Ga0209378_104852433300026528SoilDVGTDGTLYYAELNLNPDFSTGCGRVSMVRFVGGMPQAPEVLGRNLSFPDGVTVVDSSQLRVNFLKLPPAPEPDPRTCSGGGGSPSGAFID
Ga0209807_114466113300026530SoilPGTGGGSIDEYDANGVLVRNIVPSAMLQNPLGLDVGSDGTLYYAELNLNPDTSTGCGRMSMVRFVGGTPQAPEVLGRNLSFPDGVTVVDSKQLRVNFQKLPPAPEPDPRTCNGGGGSPSGAFIDG
Ga0209157_106153033300026537SoilNEYDANGLLVRNIVPSNMLLNPLGMDVGADGTLYYAELNLNPDTSTGCGRVSMVRFVGGTPQPPQVLGKNLSFPDGVTVMDSSRFRVDFLTLPPAPEPDPRTCNGGGGSPSGAFID
Ga0209161_1002822513300026548SoilNVPPGTLLNPLGMDVGSDGTLYYAELNLNSDLSTGCGRVSMVRFAGRTPQAPQVLGRNLRFPDGVTVVDSSQLRVDFTTLPPASEPDPSTCSGGG
Ga0209689_110132633300027748SoilNVPPGTLLNPLGMGVGSDGTLYYAELNLNSDFSTGCGRVSMVRFVGGVPQAPQVLGQNLSFPDGVTVIDSSQVQVDFLTLPPAPEPAPSTCNGGG
Ga0307469_1014791023300031720Hardwood Forest SoilAELNLNMDTSTGCGRVSMVRFVGGTPQAPQVLGQNLSFPDGVTVIDSSQVHVNFLKLPPAPEPAPSTCNGGG
Ga0307469_1080750823300031720Hardwood Forest SoilSDGTLYYAELNLNADTSTGCGRVSMVRFVNGTPQAPQVLGQNLSFPDGVTVVDSSQLHVSITRLPPAPEPAPSTCNGGG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.