NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090157

Metagenome / Metatranscriptome Family F090157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090157
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 59 residues
Representative Sequence MAMVSFDAATAGGAAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQDAETRSTYKQK
Number of Associated Samples 94
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.19 %
% of genes near scaffold ends (potentially truncated) 47.22 %
% of genes from short scaffolds (< 2000 bps) 79.63 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(21.296 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.370 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.22%    β-sheet: 0.00%    Coil/Unstructured: 37.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00753Lactamase_B 47.22
PF01636APH 8.33
PF11818DUF3340 7.41
PF00595PDZ 5.56
PF00483NTP_transferase 2.78
PF03572Peptidase_S41 1.85
PF12850Metallophos_2 0.93
PF13735tRNA_NucTran2_2 0.93
PF01965DJ-1_PfpI 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 1.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000709|KanNP_Total_F14TBDRAFT_1010201All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium692Open in IMG/M
3300000956|JGI10216J12902_108425914All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1224Open in IMG/M
3300002245|JGIcombinedJ26739_101110245All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300002899|JGIcombinedJ43975_10002300All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus3018Open in IMG/M
3300002909|JGI25388J43891_1031585All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300005093|Ga0062594_102703990All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium549Open in IMG/M
3300005174|Ga0066680_10831061All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005186|Ga0066676_10987218All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300005347|Ga0070668_101084143All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300005434|Ga0070709_10552321All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300005436|Ga0070713_100864270All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005440|Ga0070705_100053953All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2355Open in IMG/M
3300005445|Ga0070708_100408946All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300005445|Ga0070708_101869681All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium557Open in IMG/M
3300005447|Ga0066689_10005376All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5380Open in IMG/M
3300005447|Ga0066689_10541299All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300005450|Ga0066682_10110484All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1732Open in IMG/M
3300005471|Ga0070698_101496737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium626Open in IMG/M
3300005536|Ga0070697_100043509All Organisms → cellular organisms → Bacteria3637Open in IMG/M
3300005540|Ga0066697_10513558All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300005549|Ga0070704_100276905All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1388Open in IMG/M
3300005549|Ga0070704_100957444All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005553|Ga0066695_10041390All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2709Open in IMG/M
3300005556|Ga0066707_10962157All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia521Open in IMG/M
3300005557|Ga0066704_10262462All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1172Open in IMG/M
3300005587|Ga0066654_10006899All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4049Open in IMG/M
3300005587|Ga0066654_10086519All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1482Open in IMG/M
3300006046|Ga0066652_101562369All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M
3300006794|Ga0066658_10792064All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia533Open in IMG/M
3300009038|Ga0099829_10145990All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1885Open in IMG/M
3300009092|Ga0105250_10289609All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300009098|Ga0105245_10246000All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp.1736Open in IMG/M
3300009137|Ga0066709_103210960All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia596Open in IMG/M
3300009137|Ga0066709_104212068All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia524Open in IMG/M
3300009137|Ga0066709_104668302All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium501Open in IMG/M
3300009157|Ga0105092_10288674All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300009553|Ga0105249_12283576All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300009817|Ga0105062_1016944All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300010301|Ga0134070_10482568All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300010325|Ga0134064_10152322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium800Open in IMG/M
3300012019|Ga0120139_1030541All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1249Open in IMG/M
3300012199|Ga0137383_10066598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria2592Open in IMG/M
3300012201|Ga0137365_10095953All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2232Open in IMG/M
3300012201|Ga0137365_10250773All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1316Open in IMG/M
3300012204|Ga0137374_10139757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria2186Open in IMG/M
3300012204|Ga0137374_10441254All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1024Open in IMG/M
3300012207|Ga0137381_10117238All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2270Open in IMG/M
3300012208|Ga0137376_11120617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium673Open in IMG/M
3300012285|Ga0137370_10336708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium906Open in IMG/M
3300012349|Ga0137387_10278519All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1208Open in IMG/M
3300012350|Ga0137372_10050895All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3660Open in IMG/M
3300012351|Ga0137386_10071288All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2425Open in IMG/M
3300012353|Ga0137367_10479336All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria877Open in IMG/M
3300012355|Ga0137369_10073988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae2875Open in IMG/M
3300012355|Ga0137369_10588028All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium776Open in IMG/M
3300012359|Ga0137385_10676714All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300012360|Ga0137375_10484782All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1056Open in IMG/M
3300012398|Ga0134051_1292523All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia582Open in IMG/M
3300012582|Ga0137358_10015592All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus4819Open in IMG/M
3300012582|Ga0137358_10036461All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae3247Open in IMG/M
3300012923|Ga0137359_10267020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1526Open in IMG/M
3300014157|Ga0134078_10133384All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium962Open in IMG/M
3300015359|Ga0134085_10064522All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300015359|Ga0134085_10451617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus583Open in IMG/M
3300017654|Ga0134069_1103415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium930Open in IMG/M
3300017656|Ga0134112_10172568All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300018000|Ga0184604_10372577All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300018051|Ga0184620_10123466All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300018053|Ga0184626_10148836All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300018054|Ga0184621_10163092All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium802Open in IMG/M
3300018066|Ga0184617_1033376All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1233Open in IMG/M
3300018075|Ga0184632_10096000All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1298Open in IMG/M
3300018078|Ga0184612_10119921All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1377Open in IMG/M
3300018465|Ga0190269_10615446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus738Open in IMG/M
3300018482|Ga0066669_10096762All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria2037Open in IMG/M
3300019789|Ga0137408_1423424All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1158Open in IMG/M
3300019878|Ga0193715_1040979All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300019878|Ga0193715_1055104All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300019886|Ga0193727_1001327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus10192Open in IMG/M
3300019888|Ga0193751_1043223All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1995Open in IMG/M
3300020010|Ga0193749_1015986All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1467Open in IMG/M
3300020018|Ga0193721_1019218All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1800Open in IMG/M
3300022534|Ga0224452_1190237All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium631Open in IMG/M
3300024232|Ga0247664_1069407All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium813Open in IMG/M
3300024254|Ga0247661_1085309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium593Open in IMG/M
3300024290|Ga0247667_1090617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300024331|Ga0247668_1127000All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium518Open in IMG/M
3300025315|Ga0207697_10000494All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia22177Open in IMG/M
3300025915|Ga0207693_10014788All Organisms → cellular organisms → Bacteria6269Open in IMG/M
3300025915|Ga0207693_10935724All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300025922|Ga0207646_10062866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3314Open in IMG/M
3300026305|Ga0209688_1011406All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300026314|Ga0209268_1193532All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium504Open in IMG/M
3300026329|Ga0209375_1053605All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1995Open in IMG/M
3300026329|Ga0209375_1096413All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1337Open in IMG/M
3300026343|Ga0209159_1151244All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300026354|Ga0257180_1024496All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300026446|Ga0257178_1054629All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300026497|Ga0257164_1079329All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia554Open in IMG/M
3300026523|Ga0209808_1207914All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium643Open in IMG/M
3300026524|Ga0209690_1122975All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300026528|Ga0209378_1051646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1991Open in IMG/M
3300026550|Ga0209474_10394679All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300026551|Ga0209648_10197538All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1539Open in IMG/M
3300031231|Ga0170824_116587018All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300032180|Ga0307471_100061985All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria3165Open in IMG/M
3300032205|Ga0307472_100893126All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium822Open in IMG/M
3300033412|Ga0310810_10155371All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2651Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.41%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.93%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000709Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondanceEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KanNP_Total_F14TBDRAFT_101020123300000709SoilMAIVSFDVATAGGPAMADTKRMVQKAIERWKDDFIGKKAVSHLGRFQGETQDNETRSTFCK*
JGI10216J12902_10842591423300000956SoilMAIVSFDAATAGGVAVAAAKTMAHNARLRWKRDLIGNYAVSHLGRFHDETQDDEVRSCE*
JGIcombinedJ26739_10111024513300002245Forest SoilFDAATAGGAAVAAAKTMAHNARLRWKRAFIGDYAVSHLGRFRDETQDDETRSTCRLQ*
JGIcombinedJ43975_1000230023300002899SoilMAIVSLDVATAGGPATADTKRMAQKASDRWKDDFMSEKEVSHLGRFQGETQDDETRSTFCK*
JGI25388J43891_103158513300002909Grasslands SoilMAIVSFDAASAGGMAVVAVKTMAHKAKLRWKRDFISNYAVCHLGRFHDQTQDDETRSTCK
Ga0062594_10270399013300005093SoilMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQGETQDNETRSTFCK*
Ga0066680_1083106123300005174SoilVSFDVATAGGPAIAAAKMMAHNARLCWKRDLIGNYAVSHLGRFQRETQDDETRSTCE*
Ga0066676_1098721813300005186SoilAIADAKRMAQHASDRCKDDFIGEERVYHLGRFQSETQDVESKSTCRR*
Ga0070668_10108414313300005347Switchgrass RhizosphereTDMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQGETQDNETRSTFCK*
Ga0070709_1055232113300005434Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAETRSTYKQK*
Ga0070713_10086427013300005436Corn, Switchgrass And Miscanthus RhizosphereCRRFPTETAIVSLDVAKAGGAAMAETKKMAQNASDRWKDDFIGEKAVSHLGRVQSETQDDETRSTCRT*
Ga0070705_10005395323300005440Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAATAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDAETRSTYKQK*
Ga0070708_10040894623300005445Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAATAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDDETRSTYKQK*
Ga0070708_10186968123300005445Corn, Switchgrass And Miscanthus RhizosphereFDVATAGGAAIADAKRMAQHASDRCNDDFIGEKRVSYFRRFQSEAQDMESKST*
Ga0066689_1000537653300005447SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQNETQDGETRSTCE
Ga0066689_1054129933300005447SoilETAIVSFDVATAGGAAIADAKRMAQYANDRWKDDFIGKNRVSHLGRFQSETQDVESKSTCRR*
Ga0066682_1011048423300005450SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK*
Ga0070698_10149673713300005471Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAATAGGAAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQDAETRSTYKQK*
Ga0070697_10004350923300005536Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDASTYKQK*
Ga0066697_1051355823300005540SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRYQDETQDAETRSTYKQK*
Ga0070704_10027690513300005549Corn, Switchgrass And Miscanthus RhizosphereMAIVSLDVPTAGGAAVAAIKRTAQRASDRWKEDFIGENVVSHLGRCRDEAQDDETRSTYG
Ga0070704_10095744423300005549Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDDETRSTYKQK*
Ga0066695_1004139013300005553SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFINKNAVCHLGRFQDETQDAETRSTYKQK*
Ga0066707_1096215723300005556SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQN
Ga0066704_1026246213300005557SoilSKSRPTDMAIVSFDVAMAGGAAIVAVKRMAQYASERWNAFISKKRVSHLGRFQDETQDDGMRSTYR*
Ga0066654_1000689923300005587SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAEARSTFE
Ga0066654_1008651913300005587SoilSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK*
Ga0066652_10156236923300006046SoilAGGAAMAETKRMAQNASDRWKDDLIGEKAVSHLGRFQGETQDDETRSTCRT*
Ga0066658_1079206423300006794SoilMAIVSFDVATAGGPAIAAAKMMAHNARLCWKRDLIGNYAVSHLGRFQGETQ
Ga0099829_1014599023300009038Vadose Zone SoilMAMVSFDAASAGGGAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAETKSTYKQK*
Ga0105250_1028960923300009092Switchgrass RhizosphereSLDVPTAGGAAVAAIKRTAQRASDRWKEDFIGENVVSHLGRCRDEAQDDETRSTYG*
Ga0105245_1024600033300009098Miscanthus RhizosphereVSLDVPTAGGAAVAAIKRTAQRASDRWKEDFIGENVVSHLGRCRDEAQDDETRSTYG*
Ga0066709_10321096023300009137Grasslands SoilMAIVSLDAATAGGAVMADTKRTAQKASDRWKDDFMGKKEVSHLRRFQDEAQDDEMRS
Ga0066709_10421206813300009137Grasslands SoilMAMVSFDAAIAGGAAVSAAKRMAHNASDRWNGDFIDKNAVCHVGR
Ga0066709_10466830213300009137Grasslands SoilPTDMAIVSFDVAMAGGAAIVAVKRMALYATERWNAFISKKRVSHLGRFQDETQDDGMRSTYR*
Ga0105092_1028867433300009157Freshwater SedimentWPSSKSRPTDMAIVSLDVATAGGPAMAATKRMAPKAIDRWKDDFIGEKEVSHLGRFQGETQDNETRSTFCK*
Ga0105249_1228357623300009553Switchgrass RhizosphereMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRCQGEAQDDETRSTY
Ga0105062_101694413300009817Groundwater SandMAIVSLDVPTAGGAAMAATKRTAQKAIDRWKEEDFIGKNVVFHLGRCQRETQDDEKRSTYG*
Ga0134070_1048256823300010301Grasslands SoilPSSKSRPTDMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK*
Ga0134064_1015232223300010325Grasslands SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNADFIGNYAVSHLGRFEAETQDAEARSTFE
Ga0120139_103054123300012019PermafrostMAIVSLDAATAGGAVMADTKRTAQKASDRWKDDFMGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137383_1006659823300012199Vadose Zone SoilMAIVSLDAATAGGAAMADTKRTAQRASDRWKGDFMGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137365_1009595313300012201Vadose Zone SoilPTDMAIVSFDVAMAGGAAIVAVKRMAQYASERWNAFISKKRVSHLGRFQDETQDDGMRSTYR*
Ga0137365_1025077323300012201Vadose Zone SoilMAIVSLDAATAGGAVMADTKRTAQRASDRWKGDFMGEKEVSHLRRFQDEAQDDEMRSTCER*
Ga0137374_1013975723300012204Vadose Zone SoilMAIVSLDAATAGGAVMADTKRTAQKASDRWKGDFIGKKEVSHLRRFQDEAQDDEMRSTCER*
Ga0137374_1044125423300012204Vadose Zone SoilMAIVSFDVATAGGPAMANAKRMAQKAIDRWKDGFIGEKAVSHLGRFQRKTQDNGTRSTFA
Ga0137381_1011723813300012207Vadose Zone SoilSRPTDMAIVSFDVAMAGGAAIVAVKRMAQYASERWNAFISKKRVSHLGRFQDETQDDGMRSTYR*
Ga0137376_1112061713300012208Vadose Zone SoilMAIVSLDVAAAGGPAMADTKRMVQKAIDRWKDDFIGKKAVSHLGRFQGETQDDETRSTFCR*
Ga0137370_1033670823300012285Vadose Zone SoilMAIVSLDVATAGGAAMADTKTMAQKAIDRWKRDFIGKKGVSHLGRFQGETQDDETRSTFCR*
Ga0137387_1027851913300012349Vadose Zone SoilMAIVSLDAATAGGAVMADTKRTTQKASDRWKDDFMGKKEVSHLGRFQDETQDDAIRSTYR
Ga0137372_1005089523300012350Vadose Zone SoilMAIVSLDAATAGGAVMADTKRTAQKASDRWKGDFMGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137386_1007128823300012351Vadose Zone SoilMAIVSLDAATAGGAAMADTKRTAQKASDRWKDDFMGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137367_1047933623300012353Vadose Zone SoilMAIVSLDAATAGGAAMADTKRTAQRASDRWKGDFKGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137369_1007398823300012355Vadose Zone SoilMAIVSFDVATAGGPAMANAKRMAQKAIDRWKDGFIGEKAVSHLGRFQRKTQDDGTRSTFA
Ga0137369_1058802823300012355Vadose Zone SoilMAIVSLDAATAGGAVMADTKRTAQKASDRWKGDFIGKKEVSHLRRFQDEAQDDEMRSTCE
Ga0137385_1067671423300012359Vadose Zone SoilMAIVSLYAATAGGAAMADTKRTAQRASDRWKGDFMGEKEVSHLRRFQDEAQDDEMRSTCE
Ga0137375_1048478223300012360Vadose Zone SoilMAIVSLDAATAGGAAMADTKRTAQRASDRWKGDFKGEKEVSHLSRFQDEAQDDEMRSTCER*
Ga0134051_129252323300012398Grasslands SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQNETQDGET
Ga0137358_1001559263300012582Vadose Zone SoilMAMVSFDAASAGGAAVAAAKRMAHNASDRWNGDFIGKKVVSHLGRVQDETQDASTYKQK*
Ga0137358_1003646113300012582Vadose Zone SoilIVSFDVARTGGAAMADAKRTAQSASDRWKDDFIGERAVSHLGRVQNETQDDETRSTCRT*
Ga0137359_1026702033300012923Vadose Zone SoilMAMVSFDAAIAGGVAVAAAKRMAHNASDRWNSDFIGKKAVSHLGRVQDETQDASTYKQK*
Ga0134078_1013338423300014157Grasslands SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAEARSTYK
Ga0134085_1006452213300015359Grasslands SoilVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQNETQDGETRSTCE*
Ga0134085_1045161723300015359Grasslands SoilMAIVSLDAATAGGAMMADTKRTAQKASDRWRGDFMGKKEVSHLRRFQHEAQDDEMRSTCER*
Ga0134069_110341513300017654Grasslands SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIG
Ga0134112_1017256823300017656Grasslands SoilGNAFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQNETQDGETRSTCE
Ga0184604_1037257723300018000Groundwater SedimentMAIVSFDVATAGGPAMADAKRIVQKAIDRWKDDFIGEKEVSHLGRFQGETQDDETRSTFC
Ga0184620_1012346623300018051Groundwater SedimentMAIVSLDVAAAGGPAMADTKRMVQKAIDRWKDDFIGKKAVSHLGRFQGETQDNETRSTFY
Ga0184626_1014883623300018053Groundwater SedimentGPAMADTKRMAQKAIDRWKDDFIGKKAVSHLGRFQGGTQDDETRSTFCG
Ga0184621_1016309223300018054Groundwater SedimentMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQGETQDNEARSTFC
Ga0184617_103337623300018066Groundwater SedimentMAIVSFDVATAGGPAMADTKRMVQKAIERWKDDFIGKKAVSHLGRFQGETQDNETRSTFC
Ga0184632_1009600033300018075Groundwater SedimentGAMADTKRMAQRAIDRWKDGFIGKKSVSHLGRFQGKTQDDEARSTL
Ga0184612_1011992123300018078Groundwater SedimentMAIVSLDVATAGGGATAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQGETQDKETRSTFL
Ga0190269_1061544623300018465SoilMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQGETQDNETRSTFC
Ga0066669_1009676223300018482Grasslands SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK
Ga0137408_142342413300019789Vadose Zone SoilMAIVSLDVAAAGGPAMADTKRMVQKAIDRWKDDFIGKKAVSHLGRFQGETQDDETRSTFC
Ga0193715_104097913300019878SoilPTDIVIVSFDAARSGGAAIAEAKRTAQYASDRCKDGFIGEKRVSHLGRFQAETQDAETRS
Ga0193715_105510423300019878SoilPTETAIVSLDVATAGGAAIADAKRMAQHANDRWKDDFIGEKRVSHLGRFQSETQEVESKSTCRI
Ga0193727_100132723300019886SoilMAIVSFDVATAGGPAMADTKRMVQKAIERWKDDFIGKKAVSHLGRF
Ga0193751_104322313300019888SoilSRPTDMATVSFELAIVGGTAVVAAKTMAHNARHRCKCDFIGNYAVSHLGRFPDRTQDDQTTWPCE
Ga0193749_101598633300020010SoilTAIVSFDVATAGGAAIADAKRMAQHASDRCKDDFIGEKRVSHLRRFQSEAQDMESKSTCR
Ga0193721_101921823300020018SoilMAIVSLDAATAGGAVMADTKRTAQKASDRWKDDFMGEKEVSHLRRFQDEAQDDEMRSTWE
Ga0224452_119023723300022534Groundwater SedimentMAIVSLDVATAGGGAMAATKRMAQRAIDRWKDDFIGKKAVSHLGRFQSETQDNETRSTFC
Ga0247664_106940723300024232SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDE
Ga0247661_108530923300024254SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDASTYKQK
Ga0247667_109061713300024290SoilMAMVSFDAASAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDDETRSTYKQK
Ga0247668_112700013300024331SoilMAMVSFDAATAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDASTYKQK
Ga0207697_1000049443300025315Corn, Switchgrass And Miscanthus RhizosphereMAIVSLDVPTAGGAAVAAIKRTAQRASDRWKEDFIGENVVSHLGRCQGEAQDDETRSTYG
Ga0207693_10014788103300025915Corn, Switchgrass And Miscanthus RhizosphereETAIVSLDAARAGGAATAETKRMAQNASDRWKDDFIDEKAVSHLGRVQRETQDNETRSTCRT
Ga0207693_1093572413300025915Corn, Switchgrass And Miscanthus RhizosphereFDAASAGGGAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQDAETRSTYKQK
Ga0207646_1006286633300025922Corn, Switchgrass And Miscanthus RhizosphereMAMVSFDAATAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRVQDETQDDETRSTYKQK
Ga0209688_101140623300026305SoilMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAEARSTYKQK
Ga0209268_119353213300026314SoilAATAGGAAIAAARRMVHDARDRWNADFIRNYAVSHLGRFEAETQDAEARSTFE
Ga0209375_105360523300026329SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVS
Ga0209375_109641313300026329SoilSFDVATAGGAAIADAKRIAQHANDRWKDDFIGEKRVSHLGRFQSETQDVEAKSTCRM
Ga0209159_115124423300026343SoilKSRPTDMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK
Ga0257180_102449623300026354SoilDVATAGGAAIVAVKRMAQYASERRNAFISEKRVSHLGRFHDETQDDAIRSTYR
Ga0257178_105462913300026446SoilDAATAGGAAVAAAKRMAHNASDRWNGDFIGKKAVSHLGRFQDETQDAETKSTYKQK
Ga0257164_107932923300026497SoilMAMVSFDAASAGGGAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQDAETRSTYKQK
Ga0209808_120791423300026523SoilWPSSKSRPTDMAMVSFDAAIAGGAAVAAAKRMAHNASDRWNGDFIDKNAVCHLGRFQDETQDAETRSTYKQK
Ga0209690_112297523300026524SoilAIVSFDVAMAGGAAIVAVKRMAQYASERWNAFISKKRVSHLGRFQDETQDDGMRSTYR
Ga0209378_105164613300026528SoilMAIVSFDAAAAGGAAIAAVKSTAHNARDRWNDDFIGNYAVSHIGRFQNETQD
Ga0209474_1039467923300026550SoilTGGAAIADAKRMAQNASDRCKDDFIGEKAVSHLGRLQSETQDDETRSTCMT
Ga0209648_1019753813300026551Grasslands SoilKSRPTDMAIVSFDVATAGGTAIVAVKRMAQYASERRNAFISEKRVSHLGRFHDETQDDAIRSTYR
Ga0170824_11658701823300031231Forest SoilKRFPTETAIVSLDAARAGGAATAETKRMAQNASDRWKDDFIDEKAVSHLGRVQRETQDNETRSTCRT
Ga0307471_10006198513300032180Hardwood Forest SoilGAGGAATAETKRMAQNASDRWKDDFIDEKAVSHLGRVQRETQDNETRSTCRT
Ga0307472_10089312613300032205Hardwood Forest SoilMAMVSFDAASAGGGAVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQ
Ga0310810_1015537143300033412SoilMAMVSFDAAIAGGATVAAAKRMAHNASDRWNDDFIGKKAVSHLGRFQDETQDASTYKQK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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