NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090129

Metagenome / Metatranscriptome Family F090129

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090129
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 67 residues
Representative Sequence MEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNLRDDYSVQIKPAGG
Number of Associated Samples 96
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 94.44 %
% of genes near scaffold ends (potentially truncated) 12.96 %
% of genes from short scaffolds (< 2000 bps) 76.85 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.222 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.482 % of family members)
Environment Ontology (ENVO) Unclassified
(38.889 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.667 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.95%    β-sheet: 0.00%    Coil/Unstructured: 81.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00011HSP20 75.93
PF13432TPR_16 1.85
PF00072Response_reg 0.93
PF00118Cpn60_TCP1 0.93
PF03699UPF0182 0.93
PF12680SnoaL_2 0.93
PF12867DinB_2 0.93
PF07676PD40 0.93
PF03466LysR_substrate 0.93
PF13450NAD_binding_8 0.93
PF00440TetR_N 0.93
PF16344DUF4974 0.93
PF00069Pkinase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 75.93
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.70
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.93
COG1615Uncharacterized membrane protein, UPF0182 familyFunction unknown [S] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.22 %
UnclassifiedrootN/A2.78 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10053974All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1336Open in IMG/M
3300002561|JGI25384J37096_10061787All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300002562|JGI25382J37095_10052843All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300002562|JGI25382J37095_10159304All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300002562|JGI25382J37095_10186076All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium636Open in IMG/M
3300005177|Ga0066690_10486012All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300005180|Ga0066685_10139365All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300005445|Ga0070708_101403172All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300005468|Ga0070707_100112043All Organisms → cellular organisms → Bacteria2646Open in IMG/M
3300005518|Ga0070699_100193647All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300005536|Ga0070697_100118637All Organisms → cellular organisms → Bacteria2211Open in IMG/M
3300005555|Ga0066692_10443182All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005555|Ga0066692_10573174All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005556|Ga0066707_10051911All Organisms → cellular organisms → Bacteria2381Open in IMG/M
3300005561|Ga0066699_11290476Not Available500Open in IMG/M
3300006031|Ga0066651_10136631All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300006797|Ga0066659_10840794All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300006800|Ga0066660_11596348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium517Open in IMG/M
3300007255|Ga0099791_10009838All Organisms → cellular organisms → Bacteria3983Open in IMG/M
3300007258|Ga0099793_10517818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium594Open in IMG/M
3300007265|Ga0099794_10005907All Organisms → cellular organisms → Bacteria4935Open in IMG/M
3300007265|Ga0099794_10203042All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300009038|Ga0099829_10010351All Organisms → cellular organisms → Bacteria → Proteobacteria6023Open in IMG/M
3300009038|Ga0099829_10519537All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300009088|Ga0099830_10531549All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium961Open in IMG/M
3300009089|Ga0099828_11253487All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300009804|Ga0105063_1024031All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300009808|Ga0105071_1046486All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010087|Ga0127492_1013299All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300010136|Ga0127447_1007707All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300010139|Ga0127464_1209333All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300010142|Ga0127483_1031616All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300010304|Ga0134088_10351115All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium716Open in IMG/M
3300010320|Ga0134109_10009367All Organisms → cellular organisms → Bacteria2767Open in IMG/M
3300010335|Ga0134063_10344905All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300010905|Ga0138112_1069300All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300011409|Ga0137323_1000132All Organisms → cellular organisms → Bacteria20661Open in IMG/M
3300012096|Ga0137389_10011825All Organisms → cellular organisms → Bacteria5865Open in IMG/M
3300012198|Ga0137364_10841378All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium694Open in IMG/M
3300012198|Ga0137364_11068884All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium608Open in IMG/M
3300012199|Ga0137383_11123015All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012200|Ga0137382_10732011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium710Open in IMG/M
3300012202|Ga0137363_10951848All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300012203|Ga0137399_10418625All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300012206|Ga0137380_10554285All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300012207|Ga0137381_10475360All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300012208|Ga0137376_10530655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1020Open in IMG/M
3300012208|Ga0137376_10832471All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium794Open in IMG/M
3300012211|Ga0137377_10615651All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1022Open in IMG/M
3300012355|Ga0137369_10146377All Organisms → cellular organisms → Bacteria1880Open in IMG/M
3300012358|Ga0137368_10143532All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300012363|Ga0137390_11015928All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300012377|Ga0134029_1026520All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300012388|Ga0134031_1007142All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012389|Ga0134040_1270888All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300012390|Ga0134054_1017614All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300012397|Ga0134056_1136654All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium617Open in IMG/M
3300012404|Ga0134024_1333565All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012683|Ga0137398_10189514All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300012927|Ga0137416_11005265All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300012944|Ga0137410_10183359All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1612Open in IMG/M
3300012976|Ga0134076_10232448All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300014873|Ga0180066_1048022All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300015254|Ga0180089_1013241All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300017659|Ga0134083_10079872All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300017997|Ga0184610_1012357All Organisms → cellular organisms → Bacteria2169Open in IMG/M
3300018052|Ga0184638_1020648All Organisms → cellular organisms → Bacteria → Acidobacteria2327Open in IMG/M
3300018053|Ga0184626_10189818All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300018054|Ga0184621_10084937All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300018431|Ga0066655_10817639All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300018433|Ga0066667_10279672All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300018433|Ga0066667_10287610All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300019259|Ga0184646_1250390All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300019259|Ga0184646_1587007All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300019789|Ga0137408_1145225All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300019879|Ga0193723_1014517All Organisms → cellular organisms → Bacteria2465Open in IMG/M
3300020003|Ga0193739_1004384All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3816Open in IMG/M
3300025318|Ga0209519_10587562All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300026296|Ga0209235_1155247All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300026297|Ga0209237_1016457All Organisms → cellular organisms → Bacteria4306Open in IMG/M
3300026297|Ga0209237_1188403All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300026306|Ga0209468_1006907All Organisms → cellular organisms → Bacteria4330Open in IMG/M
3300026307|Ga0209469_1018732All Organisms → cellular organisms → Bacteria2461Open in IMG/M
3300026310|Ga0209239_1166053All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium852Open in IMG/M
3300026329|Ga0209375_1045903All Organisms → cellular organisms → Bacteria2214Open in IMG/M
3300026536|Ga0209058_1018019All Organisms → cellular organisms → Bacteria4726Open in IMG/M
3300026538|Ga0209056_10731422All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300027169|Ga0209897_1019971All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300027273|Ga0209886_1013206All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300027655|Ga0209388_1028376All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300027655|Ga0209388_1156029All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium644Open in IMG/M
3300027846|Ga0209180_10009272All Organisms → cellular organisms → Bacteria5049Open in IMG/M
3300027846|Ga0209180_10155155All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300027875|Ga0209283_10014946All Organisms → cellular organisms → Bacteria4670Open in IMG/M
3300027882|Ga0209590_10042471All Organisms → cellular organisms → Bacteria2485Open in IMG/M
3300027952|Ga0209889_1040869All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300027961|Ga0209853_1030247All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300027964|Ga0256864_1000738All Organisms → cellular organisms → Bacteria10783Open in IMG/M
3300028536|Ga0137415_10152910Not Available2143Open in IMG/M
3300028711|Ga0307293_10004880All Organisms → cellular organisms → Bacteria3529Open in IMG/M
3300030619|Ga0268386_10214706All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium1434Open in IMG/M
3300031226|Ga0307497_10327431All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300032180|Ga0307471_101412774Not Available856Open in IMG/M
3300033417|Ga0214471_10106586All Organisms → cellular organisms → Bacteria2307Open in IMG/M
3300033814|Ga0364930_0323271All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium518Open in IMG/M
3300034164|Ga0364940_0264372All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300034643|Ga0370545_137723All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300034681|Ga0370546_021378All Organisms → cellular organisms → Bacteria861Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil31.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand5.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.78%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010136Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012377Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012389Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027964Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeqEnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1005397423300002558Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
JGI25384J37096_1006178723300002561Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASANLRDDESVQIKPAGGLEHESDPED*
JGI25382J37095_1005284323300002562Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWRYQVKGTRPHRGGTRTSNGRDNLRDDPSEHESP*
JGI25382J37095_1015930423300002562Grasslands SoilMEGLLTHVASADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGNTETSNGSGNLRDDDTAFRSNPPGG*
JGI25382J37095_1018607613300002562Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASANLRDDESVQIKPAGDLEHESDPED*
Ga0066690_1048601223300005177SoilMEGLLTHVATTDCFITPPHRALDCGIVTAWWHYQVKRARPHHGIGGTSNASGNLRDSVQIKPAGR*
Ga0066685_1013936523300005180SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNLRDDYSVQIKPAGG*
Ga0070708_10140317223300005445Corn, Switchgrass And Miscanthus RhizosphereMEGLLTHVATVDCFITPPHAALDCGIVTAWWHYQVKGTRAHRGGVQIKPAGGGGLEHESDPED*
Ga0070707_10011204323300005468Corn, Switchgrass And Miscanthus RhizosphereMEGLLTHVATAECFITPPHPALDCGIVTAWWRYQVKGTRPHRGGTRTSNVNGNLRDDSSVQIKPAAG*
Ga0070699_10019364733300005518Corn, Switchgrass And Miscanthus RhizosphereMEGLLTHVATVDCFITPPHAALDCGIVTAWWHYQVKGTRAHRGGVQIKPAGGGGLEHESDPRGLSGN*
Ga0070697_10011863723300005536Corn, Switchgrass And Miscanthus RhizosphereMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNVSGNLRDDSSVQIKPAAG*
Ga0066692_1044318213300005555SoilMEGLLTHVATPDCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNTSGNVRDDPSEHESP*
Ga0066692_1057317413300005555SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGTRAHRGSTRTSNASANLRDDESVQIKPAGGLEHESDPED*
Ga0066707_1005191123300005556SoilMEGLLTHGATTDCFITPPHQALDCGIVTAWWHYQVKGTRAHPGSTRTSNGSGNLRDDYSVQSKPEER*
Ga0066699_1129047623300005561SoilATTDCFITPPHRALDCGIVTAWWHYQVKRARPHHGIGGTSNASGNLRDSVQIKPAGR*
Ga0066651_1013663123300006031SoilMEGLLTHVATADCFVTPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0066659_1084079423300006797SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGTRAHRGSTRTSNASANLRDDDSVQIKPAGGLEHESDPED*
Ga0066660_1159634813300006800SoilMEGLLTHVATTDCFITPPHRALDCGIVTAWWHYQVKRARPHHGIGGTRNASGNLRDSVQIKPAGR*
Ga0099791_1000983833300007255Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRIHRGSTRTSRASGNLRDDDSVQIKPAGGLEHESDPED*
Ga0099793_1051781813300007258Vadose Zone SoilMEGLLTHVATADCFIPPPHPALDCGIVTAWWHYQVKGTRPHRGGTRTSNVSGNLRDDYGVQIKPAGG*
Ga0099794_1000590723300007265Vadose Zone SoilMEGLLTHVATADCFITPAHPALDCGIVTAWWHYQVKGTRIHRGSTRTSRASGNLRDDDSVQIKPAGGLEHESDPED*
Ga0099794_1020304223300007265Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRERP*
Ga0099829_1001035133300009038Vadose Zone SoilMEGLLTHVAAADCFITPPHPALDCGIVTAWWHYQVKGTRPHHRSTGTSNASGNVRDDHIAQIKPAEG*
Ga0099829_1051953723300009038Vadose Zone SoilMEGLLTHVATADCFITPPHLALDCGIVSAWWQYQVKGKRPHHGSTRTSNASGNLRDDDSVQIKPAGGLQHKSDPED*
Ga0099830_1053154923300009088Vadose Zone SoilMEGLLTHVATADCFITPPHLALDCGIVSAWWHYQVKGTRPHHGSTTTSNGSGNLRDDDSVQIKPAGG*
Ga0099828_1125348723300009089Vadose Zone SoilMQGLLTHVATADCFITPPHPALDCGIVTAWWRYQVKGTGPHRDGTRTRNGSGSGNLRDDYSVQIRPAER*
Ga0105063_102403123300009804Groundwater SandMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRADHGSTRTSNGSGNLRDDHSVQIKPVEG*
Ga0105071_104648623300009808Groundwater SandMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASGNLRDDHSVEIKPAEG*
Ga0127492_101329923300010087Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNPSGNVRDDPSEHESP*
Ga0127447_100770713300010136Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVR
Ga0127464_120933313300010139Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGARPRHGSTGTSNASGNVRDDPSEHES
Ga0127483_103161613300010142Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0134088_1035111523300010304Grasslands SoilMEGLLTHVATADCFITPPHAALDCGIVTAWWRYQVKGTRPHHGSTGTSNASGNLRDDYSVQIKPAGG*
Ga0134109_1000936753300010320Grasslands SoilMEGLLTHVATAECFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDRSEHESP*
Ga0134063_1034490513300010335Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARQRHGSTGTSNASGNVRDDPSEHESP*
Ga0138112_106930013300010905Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPTKHESP*
Ga0137323_100013223300011409SoilMEGLLTQVPTADCLITPPHPALDCGIVTAWWHYQVKETRAHRGSTRTSNGSGNLRDDHTIEIKPAEG*
Ga0137389_1001182513300012096Vadose Zone SoilMEGLLTHVATADCFITPPHLALDCGIVSAWWQYQVKGKRPHHGSTRTSNASGNLRDDQSVQIKPAGD*
Ga0137364_1084137823300012198Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARAHCGGTKANNGSGNLRDDYRVQIRPAVD*
Ga0137364_1106888413300012198Vadose Zone SoilTADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGNTRTSNASGNLRDDHSVEIKPAEG*
Ga0137383_1112301523300012199Vadose Zone SoilMEGLLTHVATGDCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0137382_1073201123300012200Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARAHRGGTKANNGSGNLRDDYRVQIRPAVD*
Ga0137363_1095184813300012202Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNLRDNYSVEIKPAGG*
Ga0137399_1041862533300012203Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHRGGTRTSNVSGNLRDDYGVQIKPAGG*
Ga0137380_1055428523300012206Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHHQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0137381_1047536023300012207Vadose Zone SoilMEGLLTHVSTADCFITPPHPALDCGIVTAWWHYQVKGTRPHRGSTGTSNASGNLRDDYSVQIKPAGG*
Ga0137376_1053065523300012208Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGNTRTSNASGNLRDDHSVEIKPAEG*
Ga0137376_1083247123300012208Vadose Zone SoilMEGLLTHVSTADCFITPPHPALDCGIVTAWWHYQVKGARAHRGGTKANNGSGNLRDDYRVQIRPAVD*
Ga0137377_1061565133300012211Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNVSGNRRDDHSVQIKSAGG*
Ga0137369_1014637743300012355Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASG
Ga0137368_1014353213300012358Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWRYQVKGRRPHHGSTGTSNASGNLRDDYSVQIKPAGG*
Ga0137390_1101592823300012363Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNVRDDPSEHESP*
Ga0134029_102652023300012377Grasslands SoilMEGLLTHVATAECFITPPHPALDCGIVTAWWHYQVNGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0134031_100714223300012388Grasslands SoilMEGLLTHVATADCFVTPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDAPSEHE
Ga0134040_127088823300012389Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNLRDDYSVQIKPAGG*
Ga0134054_101761423300012390Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRPGSTGTSNASGNVRDDPSEHESP*
Ga0134056_113665413300012397Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVAAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0134024_133356523300012404Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDRSEHESP*
Ga0137398_1018951423300012683Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGRTGTSNASGNVRDDPSEHESP*
Ga0137416_1100526523300012927Vadose Zone SoilMEGLLTHVATADCFITPAHPALDCGIVTAWWHYQVKGTRPHHGNTETSNGSGNLRDDDSVQIKPAGGLEHESDPED*
Ga0137410_1018335923300012944Vadose Zone SoilMEGLLTQVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP*
Ga0134076_1023244823300012976Grasslands SoilMEGLLTHVATADCFITPPHAALDCGIVTAWWRYQVKGTRPHHGSMGTSNASGNLRGDYSVQIKPAGG*
Ga0180066_104802213300014873SoilMEGLLTHVATADCFMTLPHPALECGIVTAWWQSEVEGTRPHRGGTRTSNGSGNLRDDYSVQIKPAAG*
Ga0180089_101324133300015254SoilMEGLLTHVASADCFITPPHPAVDCGIVTAWWHYQVKGTRPHRGSTRTSNGSGNLRDDYRVQIKPAGR*
Ga0134083_1007987223300017659Grasslands SoilMEGLLTHVATADCFITPPHAALDCGIVTAWWRYQVKGTRPHHGSMGTSNASGNLRGDYSVQIKPAGG
Ga0184610_101235753300017997Groundwater SedimentMEGLLTHVATADCFITPPHPALNCGIVTAWWQYQVKGTRAHRDSTRTSNASGNLRDDYSVQIKPAAG
Ga0184638_102064843300018052Groundwater SedimentMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHRGSTRTSNGSGNLRDDYSVQIRPAQGART
Ga0184626_1018981823300018053Groundwater SedimentMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHRNGTRTSNGSGNLRDDYSVQIRPAQGART
Ga0184621_1008493723300018054Groundwater SedimentMEGLLTHVATADCFITPPHPALDCGIFTAWWQYQVKGTRAHHGSTWTSNASGNLRDDYRVQIKRA
Ga0066655_1081763923300018431Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGN
Ga0066667_1027967223300018433Grasslands SoilMEGLLTHGATTDCFITPPHQALDCGIVTAWWHYQVKGTRAHPGSTRTSNGSGNLRDDYSVQSKPEER
Ga0066667_1028761033300018433Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP
Ga0184646_125039023300019259Groundwater SedimentMEGMLTHVATADCFITPPHPALQCGIVTAWWQCEVEGDLAMPRHRTSNGSGNLRDDYSVQGRL
Ga0184646_158700713300019259Groundwater SedimentMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHRGSTRTSNASGNLRDDYRVQIKPAGARA
Ga0137408_114522523300019789Vadose Zone SoilMEGLLTHVATADCFVTPPHPALDCGIVTAWWHYQVKGTRPRHGSTGTSNASGNVRDDPSEHESP
Ga0193723_101451743300019879SoilMEGLLTYVATADCFITPPHPALDCGIVTAWWHYQVKGTRPRHSSTRASNGRGKVRDDHTVQIKPAG
Ga0193739_100438473300020003SoilMEGLLTHVATADCFITPPHPALNCGIVTAWWHYQVKGTRAHRDSTSNASGNLRDDYSVQIKPVAG
Ga0209519_1058756213300025318SoilMEALLTHVATADCFITPPHPALDCGIVTAWWHYQEKGTRPHRSGTRTSNGSGNLRDDYSVQIKPAAG
Ga0209235_115524723300026296Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASANLRDDESVQIKPAGDLEHESDPED
Ga0209237_101645723300026297Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASANLRDDESVQIKPAGGLEHESDPED
Ga0209237_118840313300026297Grasslands SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRPGSTGTSNASGNVRDDPSEHESP
Ga0209468_100690753300026306SoilMEGLLTHVATADCFVTPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP
Ga0209469_101873253300026307SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGARPRHGSTGTSNASGNVRDDPSEHESP
Ga0209239_116605323300026310Grasslands SoilHTMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRDDPSEHESP
Ga0209375_104590343300026329SoilMEGLLTHVATADCFVTPPHPALDCGIVTAWWHYQVKGARPRHGSTGTSNASGNVRD
Ga0209058_101801953300026536SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNLRDDYSVQIKPAGG
Ga0209056_1073142213300026538SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVNGTRAHRGSTRTSNASANLRDDDSVQIKPAGGLEHESDPED
Ga0209897_101997123300027169Groundwater SandMEGLLTHVATSDCFITTPHAALDCGIVTAWWQYQVKVKVTRPHRVSARTSNARGNLRDDYSVQIKPAAG
Ga0209886_101320623300027273Groundwater SandMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAHRGSTRTSNASGNLRDDHSVEIKPAEG
Ga0209388_102837623300027655Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRIHRGSTRTSRASGNLRDDDSVQIKPAGGLEHESDPED
Ga0209388_115602913300027655Vadose Zone SoilADGVHTMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTGTSNASGNLRDDYSVQIKPAGG
Ga0209180_1000927253300027846Vadose Zone SoilMEGLLTHVAAADCFITPPHPALDCGIVTAWWHYQVKGTRPHHRSTGTSNASGNVRDDHIAQIKPAEG
Ga0209180_1015515523300027846Vadose Zone SoilMEGLLTHVATADCFITPPHLALDCGIVSAWWHYQVKGTRPHHGSTTTSNGSGNLRDDDSVQIKPAGG
Ga0209283_1001494633300027875Vadose Zone SoilMEGLLTHVATADCFITPPHLALDCGIVSAWWQYQVKGKRPHHGSTRTSNASGNLRDDQSVQIKPAGD
Ga0209590_1004247123300027882Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGARPRQGSTGTSNASGNVRDDPSEHESP
Ga0209889_104086923300027952Groundwater SandMEGLLTHVATSDCFITTPHAALDCGIVTAWWHYQVKVKVTRPHRVSARTSNGRGNLRDDCARPPEEASG
Ga0209853_103024713300027961Groundwater SandMEGLLTHVATSDCFITTPHAALDCGIVTAWWQYQVKVKVTRPHRVSARTSNGRGNLRDDYSVQIKPAAG
Ga0256864_100073853300027964SoilMEGLLTHVATTDCFITPPHPAPDCGIVTAWWHSQVDGTRPHRGSTRTSNGSGNLRDDDSGSDQT
Ga0137415_1015291023300028536Vadose Zone SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWQYQVKGTGQHHGSTGTSNTSGNLGDDYSVQDDYSVQFKPARG
Ga0307293_1000488023300028711SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWQYQVKGTRAHHGSTWTSNASGNLRDDYRVQIKRAEG
Ga0268386_1021470633300030619SoilMEGLLTHVATTDCFITPPHPAPDCGIVTAWWHSQVEGTRPHRGSTRTSNGSGNLRDDDSGSDQT
Ga0307497_1032743113300031226SoilMEGLLADVATADDFITPPHPALDCVTAWWHYQVKGTRPHHGSTRAGNGSGNLRDDHSVDINPAEG
Ga0307471_10141277423300032180Hardwood Forest SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRAPRGNLRTSNASGNQGHYSVQIRPAGG
Ga0214471_1010658633300033417SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHHGSTRTSNGSGNLGDDDSVQIKPAGS
Ga0364930_0323271_267_4703300033814SedimentMEGLLTHVATADCFMTLPHPALECGIITAWWQSEVEGTRPHRGGTRTSNGSGNLRDDYSVQIKPTAG
Ga0364940_0264372_304_5073300034164SedimentMEGLLTHVARADCFMTLPHPALECGIVTVWWQSEVEGTRPHRGGTRTSNGSGNLRDDYSVQIKPTAG
Ga0370545_137723_303_5063300034643SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPHRNGTRTSNGSGNLRDDYSVQIKPAAG
Ga0370546_021378_48_2483300034681SoilMEGLLTHVATADCFITPPHPALDCGIVTAWWHYQVKGTRPRHSSTRASNGRGKVRDDHTVQIKPAG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.