Metagenome / Metatranscriptome Family F090127

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090127
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MSLTEVKASVAEMTIEERLEVAALIAHLNRAEDPEYRAELDRRMAAMDAGRKTSASKLERLHDDLSRQGR
Number of Associated Samples	90
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.704 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (10.185 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.889 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.12% β-sheet: 0.00% Coil/Unstructured: 43.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01145	Band_7	10.19
PF00338	Ribosomal_S10	2.78
PF08238	Sel1	1.85
PF14492	EFG_III	1.85
PF01261	AP_endonuc_2	1.85
PF09723	Zn-ribbon_8	1.85
PF00679	EFG_C	1.85
PF00072	Response_reg	0.93
PF02604	PhdYeFM_antitox	0.93
PF14332	DUF4388	0.93
PF06245	DUF1015	0.93
PF13548	DUF4126	0.93
PF13426	PAS_9	0.93
PF14076	DUF4258	0.93
PF01546	Peptidase_M20	0.93
PF00297	Ribosomal_L3	0.93
PF14559	TPR_19	0.93
PF00271	Helicase_C	0.93
PF15612	WHIM1	0.93
PF03738	GSP_synth	0.93
PF03764	EFG_IV	0.93
PF00701	DHDPS	0.93
PF02452	PemK_toxin	0.93
PF00079	Serpin	0.93
PF00295	Glyco_hydro_28	0.93
PF02810	SEC-C	0.93
PF01812	5-FTHF_cyc-lig	0.93
PF13378	MR_MLE_C	0.93
PF02597	ThiS	0.93
PF01476	LysM	0.93
PF13342	Toprim_Crpt	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	2.78
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.85
COG0087	Ribosomal protein L3	Translation, ribosomal structure and biogenesis [J]	0.93
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.93
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0754	Glutathionylspermidine synthase, CHAP domain	Amino acid transport and metabolism [E]	0.93
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.93
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.93
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.93
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.93
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.93
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.93
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG5434	Polygalacturonase	Carbohydrate transport and metabolism [G]	0.93

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
All Organisms	root	All Organisms	46.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
cellular organisms	root	All Organisms → cellular organisms	46.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	24.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20.37 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	8.33 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.93 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	7.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	5.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.85 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.93 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.93 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.85 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.93 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.93 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.70 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5.56 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.56 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.85 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	0.93 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.93 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_109490559	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300001213\|JGIcombinedJ13530_110120609	Not Available	895	Open in IMG/M
3300001356\|JGI12269J14319_10212227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	751	Open in IMG/M
3300002568\|C688J35102_120595331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1221	Open in IMG/M
3300005187\|Ga0066675_10833009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300005536\|Ga0070697_101131460	Not Available	697	Open in IMG/M
3300005554\|Ga0066661_10699801	Not Available	595	Open in IMG/M
3300005561\|Ga0066699_10759498	All Organisms → cellular organisms → Bacteria → PVC group	686	Open in IMG/M
3300005598\|Ga0066706_11515291	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006052\|Ga0075029_100329661	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300006102\|Ga0075015_100666334	Not Available	615	Open in IMG/M
3300006162\|Ga0075030_101531930	Not Available	522	Open in IMG/M
3300006797\|Ga0066659_10864768	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006954\|Ga0079219_11994525	Not Available	552	Open in IMG/M
3300009012\|Ga0066710_100158775	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300009012\|Ga0066710_104225026	Not Available	537	Open in IMG/M
3300009131\|Ga0115027_11021860	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300009137\|Ga0066709_101184253	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300009137\|Ga0066709_104179086	Not Available	526	Open in IMG/M
3300009502\|Ga0114951_10262299	Not Available	900	Open in IMG/M
3300009616\|Ga0116111_1159474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	532	Open in IMG/M
3300009693\|Ga0116141_10423427	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010343\|Ga0074044_10033975	All Organisms → cellular organisms → Bacteria	3571	Open in IMG/M
3300010343\|Ga0074044_10365014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	946	Open in IMG/M
3300010371\|Ga0134125_12637309	Not Available	546	Open in IMG/M
3300010391\|Ga0136847_11126362	Not Available	611	Open in IMG/M
3300010391\|Ga0136847_12325258	Not Available	1221	Open in IMG/M
3300010400\|Ga0134122_12143481	Not Available	601	Open in IMG/M
3300010937\|Ga0137776_1567754	Not Available	1096	Open in IMG/M
3300011120\|Ga0150983_10858433	Not Available	1134	Open in IMG/M
3300012201\|Ga0137365_10631625	Not Available	784	Open in IMG/M
3300012209\|Ga0137379_10640456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	969	Open in IMG/M
3300012212\|Ga0150985_121961407	Not Available	638	Open in IMG/M
3300012356\|Ga0137371_10800616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300012929\|Ga0137404_11350989	Not Available	657	Open in IMG/M
3300014159\|Ga0181530_10085871	Not Available	1919	Open in IMG/M
3300014160\|Ga0181517_10112052	Not Available	1574	Open in IMG/M
3300014201\|Ga0181537_10153979	All Organisms → cellular organisms → Bacteria → PVC group	1577	Open in IMG/M
3300014201\|Ga0181537_10301829	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300014490\|Ga0182010_10193402	Not Available	1064	Open in IMG/M
3300014494\|Ga0182017_10572639	Not Available	689	Open in IMG/M
3300014494\|Ga0182017_10665310	Not Available	632	Open in IMG/M
3300014494\|Ga0182017_10988442	Not Available	505	Open in IMG/M
3300014496\|Ga0182011_10808663	Not Available	587	Open in IMG/M
3300014498\|Ga0182019_10702978	Not Available	717	Open in IMG/M
3300014499\|Ga0182012_10438241	Not Available	857	Open in IMG/M
3300014502\|Ga0182021_10186671	Not Available	2420	Open in IMG/M
3300014502\|Ga0182021_12730009	Not Available	593	Open in IMG/M
3300014655\|Ga0181516_10447365	Not Available	661	Open in IMG/M
3300014657\|Ga0181522_10019192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3717	Open in IMG/M
3300014839\|Ga0182027_10367403	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300014839\|Ga0182027_10638402	Not Available	1138	Open in IMG/M
3300014969\|Ga0157376_12198529	Not Available	590	Open in IMG/M
3300017925\|Ga0187856_1046534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1931	Open in IMG/M
3300017970\|Ga0187783_10468980	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300017970\|Ga0187783_11133655	Not Available	563	Open in IMG/M
3300017988\|Ga0181520_10004524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	23166	Open in IMG/M
3300017988\|Ga0181520_10055881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3696	Open in IMG/M
3300017988\|Ga0181520_10060611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3495	Open in IMG/M
3300018008\|Ga0187888_1222914	Not Available	741	Open in IMG/M
3300018017\|Ga0187872_10117566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1309	Open in IMG/M
3300018018\|Ga0187886_1169580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	857	Open in IMG/M
3300018058\|Ga0187766_11295475	Not Available	531	Open in IMG/M
3300018481\|Ga0190271_11710627	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300019785\|Ga0182022_1006237	Not Available	951	Open in IMG/M
3300019890\|Ga0193728_1050126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2031	Open in IMG/M
3300019996\|Ga0193693_1000794	All Organisms → cellular organisms → Bacteria	6848	Open in IMG/M
3300020579\|Ga0210407_10560113	Not Available	892	Open in IMG/M
3300021075\|Ga0194063_10016287	All Organisms → cellular organisms → Bacteria	3878	Open in IMG/M
3300021178\|Ga0210408_10018770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5545	Open in IMG/M
3300021344\|Ga0193719_10217701	Not Available	813	Open in IMG/M
3300021363\|Ga0193699_10220499	Not Available	788	Open in IMG/M
3300021404\|Ga0210389_10252299	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300021406\|Ga0210386_10166534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1851	Open in IMG/M
3300021478\|Ga0210402_11814162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300021861\|Ga0213853_11029254	Not Available	680	Open in IMG/M
3300022516\|Ga0224542_1033236	Not Available	660	Open in IMG/M
3300024179\|Ga0247695_1055524	Not Available	581	Open in IMG/M
3300026552\|Ga0209577_10076719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2757	Open in IMG/M
3300027874\|Ga0209465_10437580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	654	Open in IMG/M
3300028556\|Ga0265337_1091012	Not Available	832	Open in IMG/M
3300028558\|Ga0265326_10191034	Not Available	587	Open in IMG/M
3300028577\|Ga0265318_10057481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1454	Open in IMG/M
3300028666\|Ga0265336_10093842	Not Available	894	Open in IMG/M
3300028666\|Ga0265336_10185662	Not Available	618	Open in IMG/M
3300029957\|Ga0265324_10186622	Not Available	704	Open in IMG/M
3300030339\|Ga0311360_10545808	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	928	Open in IMG/M
3300031057\|Ga0170834_107863771	Not Available	828	Open in IMG/M
3300031231\|Ga0170824_102941264	Not Available	514	Open in IMG/M
3300031234\|Ga0302325_10476167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1900	Open in IMG/M
3300031236\|Ga0302324_101279423	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300031247\|Ga0265340_10251803	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031521\|Ga0311364_12528893	Not Available	500	Open in IMG/M
3300031524\|Ga0302320_10276667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2265	Open in IMG/M
3300031726\|Ga0302321_102258066	Not Available	634	Open in IMG/M
3300031813\|Ga0316217_10303098	Not Available	618	Open in IMG/M
3300031902\|Ga0302322_101370484	Not Available	861	Open in IMG/M
3300031902\|Ga0302322_101708286	Not Available	771	Open in IMG/M
3300031902\|Ga0302322_102118748	Not Available	691	Open in IMG/M
3300031902\|Ga0302322_103979270	Not Available	504	Open in IMG/M
3300031962\|Ga0307479_11579283	Not Available	612	Open in IMG/M
3300032160\|Ga0311301_10018689	All Organisms → cellular organisms → Bacteria	19937	Open in IMG/M
3300032164\|Ga0315283_10025665	All Organisms → cellular organisms → Bacteria	5721	Open in IMG/M
3300032401\|Ga0315275_10625955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1201	Open in IMG/M
3300032896\|Ga0335075_10125154	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300033402\|Ga0326728_10013104	All Organisms → cellular organisms → Bacteria	18139	Open in IMG/M
3300033402\|Ga0326728_10320692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300033488\|Ga0316621_11614082	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.74%
Host-Associated	Host-Associated	8.33%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.89%
Aquatic	Environmental → Aquatic	26.85%
Plants	Host-Associated → Plants	8.33%
Wastewater	Engineered → Wastewater	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.85%
Freshwater	Environmental → Aquatic → Freshwater	21.30%
Peat	Environmental → Terrestrial → Peat	12.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.41%
Sediment	Environmental → Aquatic → Sediment	2.78%
Marine	Environmental → Aquatic → Marine	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.48%
Lake	Environmental → Aquatic → Freshwater → Lake	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.85%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.85%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.85%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.85%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.93%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021075	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20m	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022516	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1094905593	3300001213	Wetland	MSLTEVKASVAEMTVEERLDVAALIAHLNRAEDPEYRAELDRRMAAMDAGRKASASQLQHLHDDLSRQGR*
JGIcombinedJ13530_1101206092	3300001213	Wetland	MSFAEVKESVAEMSAEERLEVAALIAHLNRAEDPDYQAELDGRMSAMDAGRKTSAQALKKLHDAAD*
JGI12269J14319_102122271	3300001356	Peatlands Soil	MSLAEVKASIAGMSVEERLEVAALIAHLNRAEDPGYQEELARRMSAMDSGRKTGATALKKLHDGLAAQGR*
C688J35102_1205953311	3300002568	Soil	MSLAEVKDSIQKMTVEQRPEVAAFIAHLNRAGDLDYQAELDRRMLAMDAGQKVSEAEVARLHDELSRRGQ*
Ga0066675_108330091	3300005187	Soil	MSLAEVKSSIEAMTVDERLEIAALIAHLNRAEDPEYQTELDRRMSAMDAGHRTGEAALQRLHDDLNRQGR*
Ga0070697_1011314601	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ASITEMSLEDRLEVAALIAHLNHAADPEYTAELDRRMSAMDQGRKTGAAEIDQMHEELVRQGR*
Ga0066661_106998011	3300005554	Soil	RYVRCMSLAEVKSSIEAMTVDERLEIAALIAHLNRAEDPEYQTELDRRMSAMDAGHRTGEAALQRLHDDLNRQGR*
Ga0066699_107594981	3300005561	Soil	MSVAEVKASIVEMSVEERLEIAALIAHLNRADDPEYQAKIDRRMAAMDAGRKTDLAALEHLHEDLKQ
Ga0066706_115152911	3300005598	Soil	MGLAEVKASIVEMSVEQRLEIAALIAHLNRAEDPEYQAELDRRMSAMDAGHKNQLDRIASAP*
Ga0075029_1003296612	3300006052	Watersheds	MSFAEVKESVAEMSAEERLEVAALIAHLNRADDPEFQTELDGRMAAMDAGRKTSASDLKKRHDELD*
Ga0075015_1006663341	3300006102	Watersheds	MSMAEIKETITEMSVDQRLEIAALIAHLNRAADSEYQAELDRRMVTMDTGQRISAATLQQRHKDLLEQGR*
Ga0075030_1015319302	3300006162	Watersheds	MSLAEVKASIAGMSVEERLEVAALIAHLNRTEDPGYQAELDRRMSAMDTGRKTEATSLKKLHDELTAKGR*
Ga0066659_108647682	3300006797	Soil	MSVAEVKASIVEMSVEERLEIAALIAHLNRADDPEYQAKIDRRMAAMDAGRKTDLAALEHLHEDLKQQGR*
Ga0079219_119945252	3300006954	Agricultural Soil	EVKASITTMTVEERLEVAALIAHLNRAEDPAYQAELDERMSSMDSGRKTDAAGLKKVHDGLSAKGR*
Ga0066710_1001587754	3300009012	Grasslands Soil	MSLAEVKASIAEMSLEERLEVAALIAHLNHAEDPEYKAELDKRMSAMDCGRKTGAVALEHLHQKLSRQGR
Ga0066710_1042250261	3300009012	Grasslands Soil	MSPAEIKDRIAGLSVEERLELAALIAHLNRTDDPQYQAELDRRMAAMDGGNKTSQQNLQRLHDGLTTQGK
Ga0115027_110218601	3300009131	Wetland	MSLTEVKESVAGMTIEERLEVAALITYLNRAEDPEYRAELDRRMAAMDAGRKTSASELERLHEDLSRQGDEPRS*
Ga0066709_1011842532	3300009137	Grasslands Soil	MSLAEVKASIAEMSLEERLEVAALIAHLNHAEDPEYKAELDKRMSAMDCGRKTGAVALEHLHQKLSRQGR*
Ga0066709_1041790862	3300009137	Grasslands Soil	LAEVKASIAEMSVEQRLEIAALIAHLNRAEDPEYQAELDRRMSAMDAGHKTNSTELQVLHDKLSRQGRCQCSV*
Ga0114951_102622991	3300009502	Freshwater	MSLVEVKSSVAEMSLEERLEVAALIAHLNSAEDSAFQSDLDQRMSDMDAGRKTTETELKKLHAELLAQGR*
Ga0116111_11594742	3300009616	Peatland	LEVAALIAQLNRTEDRGYQADLDRRMSAMDSGRKTGASALKKMHDGLAAQGR*
Ga0116141_104234272	3300009693	Anaerobic Digestor Sludge	TIEERLEVAALIAHLNRAEDHEYRAELDRRMAAMDAGRKTSADQLERLHDDLSRQGR*
Ga0074044_100339752	3300010343	Bog Forest Soil	MSFAEVKESVAELSPEERLEVAALIAHLNRADDSEYQKELDRRMSAMDAGRKTPARTLKKRHDELS*
Ga0074044_103650143	3300010343	Bog Forest Soil	ALEKFLVYFSGMGFAEVKESVAELSPEERREVAALIAHLNRANDSEYQKELDRRMSAMDAGRKTSAQTLKKRHDELN*
Ga0134125_126373091	3300010371	Terrestrial Soil	MSFAEVKETIAEMSVEERLEVAALIAHLNRSNDVEYQSELDRRMSAMDAGEKVSEQTFKKLAQN*
Ga0136847_111263622	3300010391	Freshwater Sediment	VSLVEVKKTIAEMNVEERLEIAALIAHLNRADDPEYQVEMDRRMSAMDAGRKASASAVENRHKDLLKQGR*
Ga0136847_123252582	3300010391	Freshwater Sediment	MSLIEVKKSIAGMSMEERLEIAALISHLNRAEDPEYQAELDRRMSAMDAGRKTAAQSLQSRHDELARQGR*
Ga0134122_121434813	3300010400	Terrestrial Soil	AEERLEIAALIAHLNRADDPEYQAELDRRMSAMDAGRKGSAEAVEQRHRNLSDQG*
Ga0137776_15677542	3300010937	Sediment	MSVEERLEVAALIAHLNRTEDPSYQADLDRRMSAMDSGRKTSDAALKKLHDELAAQGQ*
Ga0150983_108584332	3300011120	Forest Soil	MSLAEVKASIAGMSVEERLEVAALIAHLNRAEDPRQQAELDRRMSTMNTGRKTDATALKEFHDGLAAQGQ*
Ga0137365_106316251	3300012201	Vadose Zone Soil	MSLVEVKETIAEMSVEERLEIAALIAHLNRADDTDYQVEMDRRMSAMDAGRKTSASAVENRHKDLLKQGR*
Ga0137379_106404562	3300012209	Vadose Zone Soil	MYVHFMSLAEVKTSIEEMTVDERLEIAALIAHLNRAHDPEFQTELDRRMSAMDAGRCTGEAALERLHDDLNRQGR*
Ga0150985_1219614072	3300012212	Avena Fatua Rhizosphere	VSLAEVKASIAVMSVEERLEVAALIAHLNRAEDPNYQAELDRRMSSMDAGHKSDAAALKKLHDGLTTQGR*
Ga0137371_108006161	3300012356	Vadose Zone Soil	MSLVEVKETIVEMSVEERLEIAALIAHLNRADDTDYQVEMDRRMSAMDAGRKTSASAVENRHKDLLKQGR*
Ga0137404_113509892	3300012929	Vadose Zone Soil	MSLAEVKASIQEMSVEERLEIAALIAHLNRVDDPQYREELERRMSAMDAGRKTAASKLEMLHSKLSDEGR*
Ga0181530_100858712	3300014159	Bog	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQAELDRRMAAMDAGGKKSAQDLKRRHKDLLERGR*
Ga0181517_101120521	3300014160	Bog	MSLAEVKASITGMSVDERLEVAALIAHLNRTEDPGYQAELDRRMSAMDSGRKTDAVALEKMHDGLTAHGR*
Ga0181537_101539792	3300014201	Bog	MSFAEVKESVVEMSAEERLEVAALIAHLNRADDSEYKAELDGRMSAMEAGRKTSAAALKKRHAELN*
Ga0181537_103018292	3300014201	Bog	MSMAEIKEQIAEMSTEERLEVAALIAHLNRAGDPEYQAELDQRMSAMDAGRKNSAAALENSHRNLSNQDR*
Ga0182010_101934022	3300014490	Fen	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGEKTSTQDLKRRHKDLLERGR*
Ga0182017_105726393	3300014494	Fen	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMAAMDAGKKTSTQDMKRRHKDLLEQGR*
Ga0182017_106653102	3300014494	Fen	MSLAEVKTSVAAMSIEERLDVAAFIAHLNRAEDPEYRAELDRRMACIDSGRKTPSNELERLHEDLSRKGR*
Ga0182017_109884421	3300014494	Fen	EVKERVAEMSAEERLEVAALIAHLNRAEDAEYQVELDRRMMAMDAGRKTSGPALEKRHAELDKGQ*
Ga0182011_108086631	3300014496	Fen	MSFAEVKERVAEMSAEERLEVAALIAHLNRADDSEYQAELDRRMTAMDAGRKTSGQSLEKRHAELGKGR*
Ga0182019_107029782	3300014498	Fen	MSFAEVKERVAEMSAEERLEVAALIAQLNRADDSEYQAELDRRMTAMDAGRKTSGPALEKRHAESSKGQ*
Ga0182012_104382412	3300014499	Bog	MSFAEVKESIVEMSAEERLEVAALIAHLNRADDPEYQSELDRRMAAMDAGKKFSGQSLKNPSKN*
Ga0182021_101866715	3300014502	Fen	VAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGGKTSAQDLKRRHKDLLERGR*
Ga0182021_127300091	3300014502	Fen	MSLAEVKTSVAAMSIDERLDVAAFIAHLNRAEDPEYRAELDRRMANMDSGRRTTASELERLHEDLSRKGR*
Ga0181516_104473651	3300014655	Bog	GMTVEERLEVAALIAHLNRAEDSAYQAELDRRMSSMDSGRKTGAAELNQLHDELAAEGR*
Ga0181522_100191925	3300014657	Bog	MSFAEVKESVVEMSAEERLEVAALIAHLNRADDFEYQAELDRRMSAMDSGRKTSAAALKKRHAELN*
Ga0182027_103674032	3300014839	Fen	MSFAEVKERVAEMSAEERLEVAALIAHLNRADDSEYQAELDRRMTAMDAGRKTSGLALGKRHAELGKGQ*
Ga0182027_106384023	3300014839	Fen	MSMVEVKETVAEMNVEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGGKTSAQDLKRRHKDLLERGR*
Ga0157376_121985292	3300014969	Miscanthus Rhizosphere	MSRVEVKATITEMSVDQRLEIAALIAHLNRAEDPEFEAELGRRMSAMDAGQKTSAQPLESRHKDLLRQGR*
Ga0187856_10465341	3300017925	Peatland	MSLAEVKASVAGMSVDERLEVAAFIAHLNRAEEPGYLADLDRRMSAMDSGRKTGATALKKLHDQLAARGR
Ga0187783_104689802	3300017970	Tropical Peatland	MSMVEVKETIVEMSAEERLEIAALIAHLNRADAPEYQEEMNRRMSAMDAGKKASASDFDRRHKDLLKEGR
Ga0187783_111336552	3300017970	Tropical Peatland	MSMAEVKETIAEMNAEDRLEIAALIAHLNRGDSSEYQEELDRRMSAMDRGEKVTAKDFDRRHK
Ga0181520_1000452423	3300017988	Bog	MSMAEVKDSITGMSVEERLEVAALIAHLNRADDPEYQAELDQRMSTMDAGRKHFAAALENHHNDLSNQGR
Ga0181520_100558812	3300017988	Bog	LAYFSGMSFAEVKERVVEMSPEERLEVAALIAHLNRADDSEYQTELDRRMSAMDAGRKTSARTLKKRHDELN
Ga0181520_100606111	3300017988	Bog	MSLAEVKASITGMSVDERLEVAALIAHLNRTEDPGYQAELDRRMSAMDSGRKTDAVALEKMHDGLTAHGR
Ga0187888_12229141	3300018008	Peatland	PIVSELNRVYFHAMSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGKKTSAQDLKRRHKDLLERGR
Ga0187872_101175661	3300018017	Peatland	EVKASVAGMSVDERLEVAAFIAHLNRAEEPGYLADLDRRMSAMDSGRKTGATALKKLHDQLAARGR
Ga0187886_11695802	3300018018	Peatland	MSLAEVKASIAGMSVEQRLEVAALIAHLNRAEDPGYQADLDRRMSAMDAGRKTGATALKKMHDGLAAQGR
Ga0187766_112954751	3300018058	Tropical Peatland	MSLAEVKASITGMSMEERLEVAALIAHLNRAQDPEYQAELDQRMSAMDAGRKTDVAVLKKLHDGLAAQGR
Ga0190271_117106272	3300018481	Soil	MSMAEVKESIAAMTAEERLELAGLIAHLNRADDSEYQAELDRRMAAMDSGQKNSAEALKRRHDDLSGKGQ
Ga0182022_10062372	3300019785	Fen	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGEKTSAQDLKRRHKDLLERGR
Ga0193728_10501261	3300019890	Soil	LAEVKASVAEMSIEERLDVAALIAHLNRAEDPDYRAELDRRLSAMDAGRKTPATELERLHDDLSRKGR
Ga0193693_10007948	3300019996	Soil	MSLAEVKASIAGMSRDERLELAALIAHLNRAEDPEFQAELDRRMSAMDAGRKVSEADLEKRHKELSRQGR
Ga0210407_105601131	3300020579	Soil	EVKASIAGMSVEERLEVAALIAHLNRAEDPRQQAELDRRMSTMNTGRKTDATALKEFHDGLAAQGQ
Ga0194063_100162878	3300021075	Anoxic Zone Freshwater	MSLVEVKSSVAEMSLEERLEVAALIAHLNSAEDSAFQSDLDQRMSDMDAGRKTTETELKKLHAELLAQGR
Ga0210408_100187703	3300021178	Soil	MSLAEVKACVAGMSIEDRLEIAALIAHLNRAEDPDYQAELERRLSAMDAGKTTDLSTLERLHKDLSAKGR
Ga0193719_102177012	3300021344	Soil	MSLVEVKQTIAEMSVEERLEIAALIAHLNRADDTEYQVEMDRRMSAMDAGRKTSASAVENRHKDLLKQGR
Ga0193699_102204993	3300021363	Soil	MSLIEVKQTIAEMSVEERLEIAALIAHLNRADDTEYQVEMDRRMSAMDAGRKTSASAVENRHKDLLKQGR
Ga0210389_102522992	3300021404	Soil	MSLAEIKETIAELSPEDRLELAALIAHLNRADDPEYQAELDQRMSAMDAGKKNSAEALEKRHRGLLDQGR
Ga0210386_101665344	3300021406	Soil	MSFAEVKESIAELSVEERLEVAALIAHLSRADDAEYQSELDRRMAAMDAGKKFSGQSLKNPSKN
Ga0210402_118141621	3300021478	Soil	MSLAEVKQSVASMTIEERLEVAALIAHLNRAEDPDYRAELDRRMAAMDAGRKTSATELER
Ga0213853_110292541	3300021861	Watersheds	MSMVEVKATVAEMSAEERLEIAAFIAHLNRADTTEYQSEMDRRMSAMDAGRKISAQDLERQHKDLLARGQ
Ga0224542_10332362	3300022516	Soil	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGKKTSAQDLKRRHKDLL
Ga0247695_10555241	3300024179	Soil	LEIAALLAHLNRANDPEFQAELDRRMAVMDAGRKTDLTTLERKHQDLSRQGR
Ga0209577_100767193	3300026552	Soil	MSLAEVKSSIEAMTVDERLEIAALIAHLNRAEDPEYQTELDRRMSAMDAGHRTGEAALQRLHDDLNRQGR
Ga0209465_104375801	3300027874	Tropical Forest Soil	ATVASMTIDERLEVAALIAHLNRAEDPEYRAELDRRMAAMDSGRKTSAEQIEAAAEKLTRQQA
Ga0265337_10910122	3300028556	Rhizosphere	MSMIEVKETVAEMSAEERLEIAALIAHLNRADSPEYQSELDGRMAVMDAGGKKSAQDLERRHQDLLDQGR
Ga0265326_101910341	3300028558	Rhizosphere	KLNRVYFRAMSMVEVKETVAEMSAEERLEIAALIAHLNRADSPEYQSELDGRMAAMDAGGKKSAQDLERRHQDLLDQGR
Ga0265318_100574812	3300028577	Rhizosphere	MSLAEVKASVAGMTIEERTEIAALIAHLNRAEDPQYRAELDRRMAAMDAGHKASASPLERLHEDDSNLR
Ga0265336_100938424	3300028666	Rhizosphere	MSMVEVKETVAEMSAEERLEIAALIAHLNRADSPEYQSELDGRMAVMDAGAKKSAQDLERRHQDLLDQGR
Ga0265336_101856622	3300028666	Rhizosphere	MAEVKESVAEMTVEERLEVAALIAHLNRTDDPEYQEELDRRMSAMDAGNKTSAKTLEAHNSRLNKSGK
Ga0265324_101866221	3300029957	Rhizosphere	MSMVEVKETVAEMSAEERLEIAALIAHLNRADSPEYQSELDGRMAAMDAGGKKSAQDLERRHQDLLDQGR
Ga0311360_105458083	3300030339	Bog	MRFAEVKESVAEMSAEERLEVAALIAHLNRADDPEFQAELDGRMAAMDADRKTPAPASKKRHDELD
Ga0170834_1078637712	3300031057	Forest Soil	VAALIAHLNRADDPEYQADLDQRMSAMDTGRKNSAETLEKRHQDLLDQGQ
Ga0170824_1029412641	3300031231	Forest Soil	AEMSVEERLEVAALIAHLNRADDPEYQADLDQRMSAMDAGRKNSAETLEKRHQDLLDQGQ
Ga0302325_104761675	3300031234	Palsa	VKESIVEMSAEERLEVAALIAHLNRADDPEYQAELDGRMSAMDAGRKTSAAALKKRHAEL
Ga0302324_1012794232	3300031236	Palsa	MSFAEVKESIVEMSAEERLEVAALIAHLNRADDPEYQAELDGRMSAMDAGRKTSAAALKKRHAELN
Ga0265340_102518031	3300031247	Rhizosphere	MTEVKESVAEMTVEERLEVAALIAHLNRADDPEYQEELDRRMSAMDAGNKTSAKHLETHNGRLNKSGQ
Ga0311364_125288932	3300031521	Fen	MSMVEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGGKTSAQDLKRRHKDLLERGR
Ga0302320_102766671	3300031524	Bog	EVKQSIQEMNMEERLEVAALIAHLNRADDPEYQAELDRRMTAMDQGRKNSGPSLQQLHEKLVKQGR
Ga0302321_1022580662	3300031726	Fen	MSMAEIKETVAEMSAEERLEIAAFIAHLNRAESPEYQSELDQRMAAMDAGGKKSAQDLERNHQDLLAQGR
Ga0316217_103030982	3300031813	Freshwater	KASITGMSVDERLEVAALIAHLNRTEDPGYQAELDRRMSAMDSGRKTDAVALEKMHDGLTAHGR
Ga0302322_1013704842	3300031902	Fen	MRFAEVKESVAEMSAEERLEVAALIAHLNRADDPEFQAELDGRMAAMDADRKTPAPAFKKRHDELD
Ga0302322_1017082863	3300031902	Fen	MNQVYFRAMSMAEVKETVAEMSAEERLEIAAFIAHLNRADSPEYQTELDRRMSAMDAGGKTSAQDLKRRHKDLLERGR
Ga0302322_1021187481	3300031902	Fen	MSMIEVKETVAEMSAEERLEIAGFIAHLNRADSSEYQSEMDRRMSAMDAGGKKSAQDLERCHQDLLDQGQ
Ga0302322_1039792701	3300031902	Fen	MSMAEVKETVAEMSAEKRLEIAAFIAHLNRADGTEYQSELDRRMSAMDAGKKASAPELERKICSSSSRSRLFR
Ga0307479_115792832	3300031962	Hardwood Forest Soil	MSLAEIKACITEMSVEERLDVAALIAHLNRAEDSSYQADLDWRMSAMDSGRKSGAATLKKIHDKLAAEGQ
Ga0311301_1001868911	3300032160	Peatlands Soil	MSLAEVKASIAGMSVEERLEVAALIAHLNRAEDPGYQEELARRMSAMDSGRKTGATALKKLHDGLAAQGR
Ga0315283_100256658	3300032164	Sediment	MSIDERLDVAAFIAHLNRAEDPEYRAELDRRMADMDSGRKTTASELECLHEDLSRKGQ
Ga0315275_106259552	3300032401	Sediment	MSLAEVKTSVAAMSLDERLDVAAFIAHLNRAEDPEYRAELDRRMADMDSGRQTTASELERLHEDLSRQGQ
Ga0335075_101251543	3300032896	Soil	MSMVEVKETIAEMTAEELLEIAALIAHLNRADSPEYQKEMDRRMSGMDAGKKISSEDFTRSHEELLKRGR
Ga0326728_1001310410	3300033402	Peat Soil	MSLTEVKASVAEMTIEERLEVAALIAHLNRAEDPEYRAELDRRMAAMDAGRKTSASKLERLHDDLSRQGR
Ga0326728_103206922	3300033402	Peat Soil	MSLAEVKASVAGMSVDERLEVAALIAHLNRAEDPGYQAELARRMSAMDSGRKTDAATLKNRHDGSAAQAG
Ga0316621_116140821	3300033488	Soil	MSLAEVKESIAEMSLEQRLEIAALIAHLNRAEDREYEAELDRRMSAMDQGQKHFASTLEQRHKELLNQGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences