Metagenome / Metatranscriptome Family F090061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	59 residues
Representative Sequence	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR
Number of Associated Samples	81
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.52 %
% of genes near scaffold ends (potentially truncated)	28.70 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.926 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (64.815 % of family members)
Environment Ontology (ENVO)	Unclassified (95.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (86.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.55% β-sheet: 0.00% Coil/Unstructured: 40.45%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13384	HTH_23	13.89
PF12728	HTH_17	8.33
PF13614	AAA_31	5.56
PF03796	DnaB_C	2.78
PF13155	Toprim_2	2.78
PF02899	Phage_int_SAM_1	1.85
PF01527	HTH_Tnp_1	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.78
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.78
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.85
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	30.56 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	30.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Deltaproteobacteria bacterium ADurb.Bin072	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	30.56 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000506\|Soeholt_1001979	All Organisms → cellular organisms → Bacteria	7619	Open in IMG/M
3300000506\|Soeholt_1004951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1113	Open in IMG/M
3300000506\|Soeholt_1006948	All Organisms → cellular organisms → Bacteria	8365	Open in IMG/M
3300000506\|Soeholt_1029258	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300000506\|Soeholt_1067397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1094	Open in IMG/M
3300005804\|Ga0079955_114966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1897	Open in IMG/M
3300006805\|Ga0075464_10343773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	902	Open in IMG/M
3300006840\|Ga0101790_164771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1437	Open in IMG/M
3300009121\|Ga0118671_1003690	All Organisms → cellular organisms → Bacteria	7246	Open in IMG/M
3300009588\|Ga0116232_1027169	Not Available	696	Open in IMG/M
3300009607\|Ga0123327_1017631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	3611	Open in IMG/M
3300009642\|Ga0123331_1218086	Not Available	570	Open in IMG/M
3300009647\|Ga0123326_1043863	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300009648\|Ga0116175_1099528	Not Available	1020	Open in IMG/M
3300009648\|Ga0116175_1149028	Not Available	796	Open in IMG/M
3300009655\|Ga0116190_1006880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	7265	Open in IMG/M
3300009655\|Ga0116190_1238102	Not Available	606	Open in IMG/M
3300009658\|Ga0116188_1016919	All Organisms → cellular organisms → Bacteria	4135	Open in IMG/M
3300009659\|Ga0123328_1384517	Not Available	505	Open in IMG/M
3300009666\|Ga0116182_1118120	Not Available	1296	Open in IMG/M
3300009666\|Ga0116182_1124597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1248	Open in IMG/M
3300009666\|Ga0116182_1151217	Not Available	1088	Open in IMG/M
3300009669\|Ga0116148_1309806	Not Available	644	Open in IMG/M
3300009673\|Ga0116185_1035816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	2812	Open in IMG/M
3300009673\|Ga0116185_1165960	Not Available	1030	Open in IMG/M
3300009674\|Ga0116173_1285280	Not Available	742	Open in IMG/M
3300009674\|Ga0116173_1319983	Not Available	687	Open in IMG/M
3300009675\|Ga0116149_1110529	Not Available	1402	Open in IMG/M
3300009675\|Ga0116149_1305052	Not Available	685	Open in IMG/M
3300009675\|Ga0116149_1399519	Not Available	572	Open in IMG/M
3300009676\|Ga0116187_1486505	Not Available	531	Open in IMG/M
3300009680\|Ga0123335_1041369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	3228	Open in IMG/M
3300009682\|Ga0116172_10172045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1143	Open in IMG/M
3300009689\|Ga0116186_1023593	All Organisms → cellular organisms → Bacteria	3896	Open in IMG/M
3300009690\|Ga0116143_10093049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1755	Open in IMG/M
3300009690\|Ga0116143_10098195	Not Available	1696	Open in IMG/M
3300009692\|Ga0116171_10037625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	3279	Open in IMG/M
3300009692\|Ga0116171_10064261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	2317	Open in IMG/M
3300009693\|Ga0116141_10256906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	939	Open in IMG/M
3300009693\|Ga0116141_10459038	Not Available	647	Open in IMG/M
3300009713\|Ga0116163_1003229	All Organisms → cellular organisms → Bacteria	9188	Open in IMG/M
3300009714\|Ga0116189_1203913	Not Available	704	Open in IMG/M
3300009720\|Ga0116159_1104022	Not Available	1290	Open in IMG/M
3300009767\|Ga0116161_1188553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	893	Open in IMG/M
3300009767\|Ga0116161_1228160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	782	Open in IMG/M
3300009768\|Ga0116193_1017579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	4030	Open in IMG/M
3300009769\|Ga0116184_10175920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	998	Open in IMG/M
3300009776\|Ga0116154_10340958	Not Available	641	Open in IMG/M
3300009838\|Ga0116153_10184118	Not Available	862	Open in IMG/M
3300010342\|Ga0116252_10588487	Not Available	621	Open in IMG/M
3300010344\|Ga0116243_10281535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1068	Open in IMG/M
3300010344\|Ga0116243_10454522	Not Available	787	Open in IMG/M
3300010348\|Ga0116255_10750912	Not Available	616	Open in IMG/M
3300010349\|Ga0116240_10380299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	956	Open in IMG/M
3300010349\|Ga0116240_10781241	Not Available	617	Open in IMG/M
3300010350\|Ga0116244_10269617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1168	Open in IMG/M
3300010351\|Ga0116248_11158872	Not Available	515	Open in IMG/M
3300010352\|Ga0116247_10021342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6971	Open in IMG/M
3300010352\|Ga0116247_10694772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	764	Open in IMG/M
3300014203\|Ga0172378_10992506	Not Available	600	Open in IMG/M
3300014206\|Ga0172377_10089794	All Organisms → cellular organisms → Bacteria	2820	Open in IMG/M
3300019206\|Ga0179943_1051332	Not Available	1483	Open in IMG/M
3300019220\|Ga0179936_1236575	Not Available	913	Open in IMG/M
3300019224\|Ga0180029_1094061	Not Available	1474	Open in IMG/M
3300019226\|Ga0179934_1040028	Not Available	1361	Open in IMG/M
3300019227\|Ga0179956_1031349	Not Available	834	Open in IMG/M
3300019237\|Ga0180028_1013235	Not Available	1109	Open in IMG/M
3300025587\|Ga0208938_1100404	Not Available	658	Open in IMG/M
3300025597\|Ga0208825_1073566	Not Available	865	Open in IMG/M
3300025611\|Ga0209408_1006747	All Organisms → cellular organisms → Bacteria	5022	Open in IMG/M
3300025613\|Ga0208461_1046488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1456	Open in IMG/M
3300025613\|Ga0208461_1140676	Not Available	601	Open in IMG/M
3300025638\|Ga0208198_1050957	Not Available	1465	Open in IMG/M
3300025678\|Ga0208695_1054048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1458	Open in IMG/M
3300025682\|Ga0209718_1206680	Not Available	530	Open in IMG/M
3300025691\|Ga0208826_1005196	All Organisms → cellular organisms → Bacteria	8035	Open in IMG/M
3300025702\|Ga0209203_1081498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1113	Open in IMG/M
3300025706\|Ga0209507_1185919	Not Available	550	Open in IMG/M
3300025713\|Ga0208195_1068472	Not Available	1384	Open in IMG/M
3300025713\|Ga0208195_1200678	Not Available	615	Open in IMG/M
3300025714\|Ga0208458_1109623	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	966	Open in IMG/M
3300025714\|Ga0208458_1246096	Not Available	538	Open in IMG/M
3300025720\|Ga0208197_1158873	Not Available	738	Open in IMG/M
3300025724\|Ga0208196_1113916	Not Available	932	Open in IMG/M
3300025730\|Ga0209606_1023675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	3343	Open in IMG/M
3300025762\|Ga0208040_1027571	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300025762\|Ga0208040_1291176	Not Available	526	Open in IMG/M
3300025858\|Ga0209099_1084429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1427	Open in IMG/M
3300025861\|Ga0209605_1008484	All Organisms → cellular organisms → Bacteria	6960	Open in IMG/M
3300026311\|Ga0209723_1245458	Not Available	624	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1048055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	2186	Open in IMG/M
(restricted) 3300028567\|Ga0255342_1017432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	4992	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1036753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	2972	Open in IMG/M
(restricted) 3300028576\|Ga0255340_1025412	All Organisms → cellular organisms → Bacteria	3752	Open in IMG/M
(restricted) 3300028576\|Ga0255340_1214863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	782	Open in IMG/M
3300028602\|Ga0265294_10614051	Not Available	637	Open in IMG/M
3300028630\|Ga0302247_1074841	Not Available	759	Open in IMG/M
(restricted) 3300028677\|Ga0255346_1241182	Not Available	685	Open in IMG/M
(restricted) 3300028677\|Ga0255346_1331052	Not Available	534	Open in IMG/M
3300029202\|Ga0167843_100796	All Organisms → cellular organisms → Bacteria	8829	Open in IMG/M
3300029252\|Ga0167179_1026524	Not Available	1182	Open in IMG/M
3300029255\|Ga0168097_1008203	All Organisms → cellular organisms → Bacteria	3454	Open in IMG/M
3300029255\|Ga0168097_1047430	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300029311\|Ga0167331_1006121	All Organisms → cellular organisms → Bacteria	4987	Open in IMG/M
3300029311\|Ga0167331_1019221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1862	Open in IMG/M
3300029440\|Ga0167329_1048780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	795	Open in IMG/M
3300029446\|Ga0167332_1037393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin072	1096	Open in IMG/M
3300029942\|Ga0168096_1026451	Not Available	1368	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	95.37%
Environmental	Environmental	4.63%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	78.70%
Bioreactor	Engineered → Bioreactor	9.26%
Built Environment	Engineered → Built Environment	6.48%
Aquatic	Environmental → Aquatic	4.63%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	66.67%
Anaerobic	Engineered → Bioreactor → Anaerobic	8.33%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	7.41%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	6.48%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	4.63%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Marine	Environmental → Aquatic → Marine	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Landfill	Engineered → Solid Waste → Landfill	0.93%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	66.67%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	8.33%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	7.41%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	6.48%
Dissolved Organics (Anaerobic)	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic)	4.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.93%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	66.67%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	8.33%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	7.41%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	6.48%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	64.81%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	8.33%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	7.41%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	6.48%
Anaerobic Digester	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Anaerobic Digester	4.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Polluted Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Polluted Lake Sediment	0.93%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.93%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	0.93%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	0.93%
Anaerobic Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000506	Anaerobic digester microbial communities from Northern Denmark, sample from Soeholt sludge	Engineered	Open in IMG/M
3300005804	Freshwater sediment microbial communities from Rio Mameyes, Puerto Rico - dichloromethane (DCM) enrichment	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006840	Anaerobic bioreactor microbial communities from Canach, Luxembourg	Engineered	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009588	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009648	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG	Engineered	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300009692	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC107_MetaG	Engineered	Open in IMG/M
3300009714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG	Engineered	Open in IMG/M
3300009720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG	Engineered	Open in IMG/M
3300009767	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaG	Engineered	Open in IMG/M
3300009768	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaG	Engineered	Open in IMG/M
3300009769	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA5_MetaG	Engineered	Open in IMG/M
3300009776	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG	Engineered	Open in IMG/M
3300009838	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG	Engineered	Open in IMG/M
3300010342	AD_JPNAca1	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010348	AD_HKYLca	Engineered	Open in IMG/M
3300010349	AD_HKTAca	Engineered	Open in IMG/M
3300010350	AD_HKSTca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300019206	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_STIC08_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019220	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC059_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019224	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019226	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC055_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019227	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR3_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019237	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-A RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025587	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025597	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025611	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC107_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025678	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC111_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025691	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025702	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025706	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025724	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025762	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025858	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028567 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant14	Engineered	Open in IMG/M
3300028568 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant20	Engineered	Open in IMG/M
3300028576 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant10	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028630	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Ile	Engineered	Open in IMG/M
3300028677 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant22	Engineered	Open in IMG/M
3300029202	Polluted lake sediment microbial communities from Telengana, India - LAKES1	Environmental	Open in IMG/M
3300029252	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP26 - Henriksdal-digested 138	Engineered	Open in IMG/M
3300029255	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP9 - Uppsala-digested 110	Engineered	Open in IMG/M
3300029311	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP12 - Kappala-digested 113	Engineered	Open in IMG/M
3300029440	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP10 - Uppsala-digested 111	Engineered	Open in IMG/M
3300029446	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP13 - Kappala-digested 114	Engineered	Open in IMG/M
3300029942	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP8 - Uppsala-digested 109	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Soeholt_10019791	3300000506	Anaerobic Digester	ARGRDVMDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLNQIQMVIEDRR*
Soeholt_10049512	3300000506	Anaerobic Digester	MDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Soeholt_10069486	3300000506	Anaerobic Digester	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Soeholt_10292585	3300000506	Anaerobic Digester	MISQNILTELNKTLIRYRAGIIDLQRCRQELSLMLAMLKAYEDTVLEEKLDRIQSVIEERK*
Soeholt_10673972	3300000506	Anaerobic Digester	MISQNILKELNKTMIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEKLDRIQAILEERQ*
Ga0079955_1149665	3300005804	Sediment	MDSQDILRELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGRS*
Ga0075464_103437731	3300006805	Aqueous	MISQNILTELNKTLIRYRAGIIDLQRCRQELSLMLAMLKAYEDTVMEEKIDRIQAILEERQ*
Ga0101790_1647712	3300006840	Anaerobic Reactor	MDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDAVMEEKLDRIQMVIGDRR*
Ga0118671_10036908	3300009121	Anaerobic Wastewater Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEERR*
Ga0116232_10271692	3300009588	Anaerobic Biogas Reactor	MDGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0123327_10176313	3300009607	Anaerobic Biogas Reactor	MEEMMDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0123331_12180861	3300009642	Anaerobic Biogas Reactor	GAMVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEERR*
Ga0123326_10438632	3300009647	Anaerobic Biogas Reactor	MMDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116175_10995282	3300009648	Anaerobic Digestor Sludge	MTGQMIFSELNKTLIRYRAGLISLERCRQELSILIAMMRAYEDTVMEEKLDNIQAILEERR*
Ga0116175_11490282	3300009648	Anaerobic Digestor Sludge	MMDSQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEDGRR*
Ga0116190_10068806	3300009655	Anaerobic Digestor Sludge	MISQNILKELNKTMIRYRAGLIDLQRCRQELSILIAMLKAYEDTVMEEKLDRIQAILEERQ*
Ga0116190_12381023	3300009655	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLMLAMLKAYEDTVMEEKIDRIQAILEERQ*
Ga0116188_10169192	3300009658	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLMLAMLKAYEDTVMEEQMDKIQAVLEERR*
Ga0123328_13845172	3300009659	Anaerobic Biogas Reactor	MDGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEDGRR*
Ga0116182_11181203	3300009666	Anaerobic Digestor Sludge	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLNQIQMVIEDRR*
Ga0116182_11245972	3300009666	Anaerobic Digestor Sludge	MEGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0116182_11512172	3300009666	Anaerobic Digestor Sludge	LKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGRS*
Ga0116148_13098062	3300009669	Anaerobic Digestor Sludge	MIGQNILNELNKTLIRYRAGIIDLQRCRQELSLLVAMMRAYEDTVLEEKLDRIQSVIEERK*
Ga0116185_10358163	3300009673	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGIIDLQRCRQELSLMLAMLKAYEDTVMEEKIDRIQAILEERQ*
Ga0116185_11659602	3300009673	Anaerobic Digestor Sludge	KTLIRYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK*
Ga0116173_12852802	3300009674	Anaerobic Digestor Sludge	MIGQNILDELNKTLIRYRAGLIDLQRCRQELSILVAMMRAYEDTVMEEKLDGILAVLEERR*
Ga0116173_13199832	3300009674	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDKIQAVLEERR*
Ga0116149_11105292	3300009675	Anaerobic Digestor Sludge	LNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGRS*
Ga0116149_13050522	3300009675	Anaerobic Digestor Sludge	ILKELNKTMIRYKAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEERR*
Ga0116149_13995193	3300009675	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEKL
Ga0116187_14865052	3300009676	Anaerobic Digestor Sludge	MIGQNILDELNKTLIRYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK*
Ga0123335_10413692	3300009680	Anaerobic Biogas Reactor	MMDSQDILRELNKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116172_101720452	3300009682	Anaerobic Digestor Sludge	MIGQNILDELNKTLIRYRAGIIDLQRCRQELSLLIAMLKAYEDTVLEEKLDRIQSVMEERR*
Ga0116186_10235931	3300009689	Anaerobic Digestor Sludge	KTMIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDKIQAVLEERR*
Ga0116143_100930493	3300009690	Anaerobic Digestor Sludge	LRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116143_100981953	3300009690	Anaerobic Digestor Sludge	LRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEDGRR*
Ga0116171_100376254	3300009692	Anaerobic Digestor Sludge	MIGQNILSELNKTLIRYRAGIIDLQRCRQELSLLVAMMRAYEDTVLEEKLDRIQSVIEERK*
Ga0116171_100642613	3300009692	Anaerobic Digestor Sludge	MIGQNILDELNKTLIKYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK*
Ga0116141_102569061	3300009693	Anaerobic Digestor Sludge	MDGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQ
Ga0116141_104590383	3300009693	Anaerobic Digestor Sludge	MISQNILKELNKTMIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDRIQAVLEERR*
Ga0116163_10032295	3300009713	Anaerobic Digestor Sludge	MVSQNILTELNKTLIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEERR*
Ga0116189_12039132	3300009714	Anaerobic Digestor Sludge	LMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLNQIQMVIEDRR*
Ga0116159_11040223	3300009720	Anaerobic Digestor Sludge	MEGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEDGRR*
Ga0116161_11885533	3300009767	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDRIQAVLEERR*
Ga0116161_12281602	3300009767	Anaerobic Digestor Sludge	MEGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116193_10175794	3300009768	Anaerobic Digestor Sludge	MTGEMLFSEINKTLIRYRTGLISLERCRQELSILIAMMRAYEDIVMEEKLDRIQSILEERR*
Ga0116184_101759201	3300009769	Anaerobic Digestor Sludge	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116154_103409583	3300009776	Anaerobic Digestor Sludge	MEEMMDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDNIQAILEERR*
Ga0116153_101841181	3300009838	Anaerobic Digestor Sludge	KVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116252_105884872	3300010342	Anaerobic Digestor Sludge	MMDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0116243_102815352	3300010344	Anaerobic Digestor Sludge	MTGHKILQELNKTMIRYRAGMINSERCRQELSVLLAMMRVYEDIMLEEKLNKIKAVLEMRA*
Ga0116243_104545221	3300010344	Anaerobic Digestor Sludge	MMDSQDILMELNKTLIKYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR*
Ga0116255_107509121	3300010348	Anaerobic Digestor Sludge	MTGQRILNELNKTLIRYRAGLITVEQCKQELSLLLAMMKAYEDTVLEEKLDRIEAVLEERR*
Ga0116240_103802992	3300010349	Anaerobic Digestor Sludge	MISQNILSELNKTLIRYRAGLIDLQRCRQELSLLIAMLKAYEDTAMEEQMDKIQAVLEERR*
Ga0116240_107812412	3300010349	Anaerobic Digestor Sludge	MEEMMDSQDILRELKKVLIRYRTGLIPIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0116244_102696171	3300010350	Anaerobic Digestor Sludge	LRELNKTLIKYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGRS*
Ga0116248_111588722	3300010351	Anaerobic Digestor Sludge	MTGQRILTELNKTLIRYRTGLITGEQCRQELSLLLAMLRAYEDTVMEEKLDRIEAVIEERR*
Ga0116247_100213426	3300010352	Anaerobic Digestor Sludge	MEGMMESQDILRELKKVLIRYRTGLIPIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0116247_106947721	3300010352	Anaerobic Digestor Sludge	MIGQNILDELNKTLIRYRAGIIDMQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK*
Ga0172378_109925061	3300014203	Groundwater	KKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR*
Ga0172377_100897945	3300014206	Landfill Leachate	MVSQNILKELNKTLVRYRAGLIDVQRCRQELSLLIAMLKAYEDTVMEEQMDKIQAVLEERR*
Ga0179943_10513322	3300019206	Anaerobic Digestor Sludge	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLNQIQMVIEDR
Ga0179936_12365752	3300019220	Anaerobic Digestor Sludge	ESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR
Ga0180029_10940613	3300019224	Anaerobic Biogas Reactor	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEER
Ga0179934_10400283	3300019226	Anaerobic Digestor Sludge	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDR
Ga0179956_10313493	3300019227	Anaerobic Digestor Sludge	MDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDR
Ga0180028_10132352	3300019237	Anaerobic Biogas Reactor	MESQDILRELKKVLIRYRTGLIPIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEER
Ga0208938_11004042	3300025587	Anaerobic Digestor Sludge	SELNKTLIRYRAGLISLERCRQELSILIAMMRAYEDTVMEEKLDNIQAILEERR
Ga0208825_10735662	3300025597	Anaerobic Digestor Sludge	MIGQNILNELNKTLIRYRAGIIDLQRCRQELSLLVAMMRAYEDTVLEEKLDRIQSVIEER
Ga0209408_10067474	3300025611	Anaerobic Digestor Sludge	MVSQNILTELNKTLIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEER
Ga0208461_10464882	3300025613	Anaerobic Digestor Sludge	MISQNILKELNKTMIRYRAGLIDLQRCRQELSILIAMLKAYEDTVMEEKLDRIQAILEER
Ga0208461_11406762	3300025613	Anaerobic Digestor Sludge	LKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEKLDRIQMVIGDRR
Ga0208198_10509572	3300025638	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLMLAMLKAYEDTVMEEQMDKIQAVLEER
Ga0208695_10540484	3300025678	Anaerobic Digestor Sludge	MTGQMIFSELNKTLIRYRAGLISLERCRQELSILIAMMRAYEDTVMEEKLDNIQAILEER
Ga0209718_12066803	3300025682	Anaerobic Digestor Sludge	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSR
Ga0208826_10051967	3300025691	Anaerobic Digestor Sludge	MTGEMLFSEINKTLIRYRTGLISLERCRQELSILIAMMRAYEDIVMEEKLDRIQSILEER
Ga0209203_10814984	3300025702	Anaerobic Digestor Sludge	MDSQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEER
Ga0209507_11859191	3300025706	Anaerobic Digestor Sludge	KVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDRR
Ga0208195_10684722	3300025713	Anaerobic Digestor Sludge	LNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGRS
Ga0208195_12006781	3300025713	Anaerobic Digestor Sludge	TLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMSRIQAVLEERR
Ga0208458_11096232	3300025714	Anaerobic Digestor Sludge	MISQNILTELNKTLIRYRAGIIDLQRCRQELSLMLAMLKAYEDTVMEEKIDRIQAILEER
Ga0208458_12460963	3300025714	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDKIQAVLEER
Ga0208197_11588732	3300025720	Anaerobic Digestor Sludge	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEER
Ga0208196_11139162	3300025724	Anaerobic Digestor Sludge	KTLIRYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK
Ga0209606_10236753	3300025730	Anaerobic Digestor Sludge	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLDRIQMVIGDR
Ga0208040_10275712	3300025762	Anaerobic Digestor Sludge	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEDGRR
Ga0208040_12911761	3300025762	Anaerobic Digestor Sludge	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQM
Ga0209099_10844292	3300025858	Anaerobic Digestor Sludge	MIGQNILSELNKTLIRYRAGIIDLQRCRQELSLLVAMMRAYEDTVLEEKLDRIQSVIEER
Ga0209605_10084844	3300025861	Anaerobic Digestor Sludge	MESQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLDRIQMVIGDR
Ga0209723_12454582	3300026311	Anaerobic Biogas Reactor	ELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR
(restricted) Ga0255343_10480552	3300028561	Wastewater	MDSQDILRELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEDGRR
(restricted) Ga0255342_10174323	3300028567	Wastewater	MIGQNILDELNKTLIRYRAGLIDLQRCRQELSILVAMMRAYEDTVMEEKLDGILAVLEER
(restricted) Ga0255345_10367533	3300028568	Wastewater	MISQNILTELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMDKIQAVLEER
(restricted) Ga0255340_10254126	3300028576	Wastewater	MDSQDILMELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKL
(restricted) Ga0255340_12148632	3300028576	Wastewater	MDSQDILRELNKTLIKYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKMSRIQAVLEGR
Ga0265294_106140511	3300028602	Groundwater	MVSQNILKELNKTLVRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEQMD
Ga0302247_10748411	3300028630	Activated Sludge	EGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILATMLKAYEDTVMEEKLSRIQAVLEERR
(restricted) Ga0255346_12411822	3300028677	Wastewater	MIGQNILDELNKTLIRYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEER
(restricted) Ga0255346_13310521	3300028677	Wastewater	MDGIMESQDILRELKKVLIRYRTGLISIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEDGRR
Ga0167843_1007967	3300029202	Polluted Lake Sediment	MISQNILKELNKTMIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEKLDRIQAILEER
Ga0167179_10265243	3300029252	Biosolids	MESQDILRELKKVLIRYRTGLIPIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQAVLEER
Ga0168097_10082035	3300029255	Biosolids	MIGQNILKELNKTLIRYRAGIIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEER
Ga0168097_10474303	3300029255	Biosolids	MESQDILRELKKVLIRYRTGLIPIEQCRQEVSILAVMLKAYEDTVMEE
Ga0167331_10061215	3300029311	Biosolids	MISQNILKELNKTMIRYRAGLIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEER
Ga0167331_10192212	3300029311	Biosolids	MIGQNILKELNKTMIRYRAGLIDLQRCRQELSLLIAMLKAYEDTVMEEKLDRIQAILEER
Ga0167329_10487802	3300029440	Biosolids	MESQDILRELKKVLIRYRTGLIPIEQCRQEVSILAVMLKAYEDTVMEEKLSRIQ
Ga0167332_10373932	3300029446	Biosolids	MDSQDILRELKKVLIRYRAGLISIEQCRQEVSILATMLKAYEDTVMEEKLNQIQMVIEDR
Ga0168096_10264511	3300029942	Biosolids	ILKELNKTMIRYRAGLIDLQRCRQELALLIAMLKAYEDTVLEEKLDRIQSVIEERK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters