NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090031

Metagenome Family F090031

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090031
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 85 residues
Representative Sequence MKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR
Number of Associated Samples 86
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 42.99 %
% of genes near scaffold ends (potentially truncated) 32.41 %
% of genes from short scaffolds (< 2000 bps) 82.41 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(23.148 % of family members)
Environment Ontology (ENVO) Unclassified
(27.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.185 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.54%    β-sheet: 20.54%    Coil/Unstructured: 58.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF02586SRAP 15.74
PF04828GFA 5.56
PF01336tRNA_anti-codon 4.63
PF04237YjbR 4.63
PF13763DUF4167 3.70
PF00817IMS 1.85
PF13523Acetyltransf_8 0.93
PF01329Pterin_4a 0.93
PF02384N6_Mtase 0.93
PF00903Glyoxalase 0.93
PF069833-dmu-9_3-mt 0.93
PF12770CHAT 0.93
PF00872Transposase_mut 0.93
PF14279HNH_5 0.93
PF00528BPD_transp_1 0.93
PF00248Aldo_ket_red 0.93
PF13468Glyoxalase_3 0.93
PF02735Ku 0.93
PF12681Glyoxalase_2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 15.74
COG3791Uncharacterized conserved proteinFunction unknown [S] 5.56
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 4.63
COG0389Nucleotidyltransferase/DNA polymerase DinP involved in DNA repairReplication, recombination and repair [L] 1.85
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.93
COG2154Pterin-4a-carbinolamine dehydrataseCoenzyme transport and metabolism [H] 0.93
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.93
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.93
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.33 %
UnclassifiedrootN/A41.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_113931598All Organisms → cellular organisms → Bacteria → Proteobacteria1436Open in IMG/M
3300004156|Ga0062589_100309085Not Available1227Open in IMG/M
3300004156|Ga0062589_101146816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium739Open in IMG/M
3300004479|Ga0062595_101127535Not Available688Open in IMG/M
3300004480|Ga0062592_100259155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium1282Open in IMG/M
3300004643|Ga0062591_100477174All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1062Open in IMG/M
3300005093|Ga0062594_100011712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3216Open in IMG/M
3300005328|Ga0070676_10117614All Organisms → cellular organisms → Bacteria → Proteobacteria1664Open in IMG/M
3300005329|Ga0070683_101691215Not Available608Open in IMG/M
3300005332|Ga0066388_100318861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2200Open in IMG/M
3300005343|Ga0070687_100692052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales711Open in IMG/M
3300005345|Ga0070692_10114603Not Available1495Open in IMG/M
3300005365|Ga0070688_100461977Not Available951Open in IMG/M
3300005438|Ga0070701_10738235Not Available666Open in IMG/M
3300005457|Ga0070662_101561741Not Available569Open in IMG/M
3300005544|Ga0070686_100316455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1162Open in IMG/M
3300005544|Ga0070686_101070035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.665Open in IMG/M
3300005566|Ga0066693_10356610Not Available590Open in IMG/M
3300005719|Ga0068861_100216357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1617Open in IMG/M
3300005764|Ga0066903_100874424All Organisms → cellular organisms → Bacteria1622Open in IMG/M
3300005764|Ga0066903_103623418Not Available831Open in IMG/M
3300005841|Ga0068863_100760597Not Available965Open in IMG/M
3300005843|Ga0068860_102166092Not Available577Open in IMG/M
3300005985|Ga0081539_10181382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium987Open in IMG/M
3300006046|Ga0066652_100829100Not Available884Open in IMG/M
3300006845|Ga0075421_100835677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1057Open in IMG/M
3300006847|Ga0075431_100321053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1561Open in IMG/M
3300006847|Ga0075431_101289582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales691Open in IMG/M
3300006852|Ga0075433_10362928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1279Open in IMG/M
3300006852|Ga0075433_10875721Not Available784Open in IMG/M
3300006854|Ga0075425_100209795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2239Open in IMG/M
3300006871|Ga0075434_101490281Not Available686Open in IMG/M
3300006880|Ga0075429_100011523All Organisms → cellular organisms → Bacteria7667Open in IMG/M
3300006880|Ga0075429_101829571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum527Open in IMG/M
3300007004|Ga0079218_11718312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales697Open in IMG/M
3300009094|Ga0111539_10129099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2960Open in IMG/M
3300009094|Ga0111539_11805843Not Available709Open in IMG/M
3300009094|Ga0111539_13224457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae526Open in IMG/M
3300009098|Ga0105245_12501146Not Available570Open in IMG/M
3300009100|Ga0075418_10215793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A002043Open in IMG/M
3300009100|Ga0075418_10955178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae927Open in IMG/M
3300009100|Ga0075418_11157759Not Available838Open in IMG/M
3300009100|Ga0075418_11181771Not Available829Open in IMG/M
3300009100|Ga0075418_11521565Not Available726Open in IMG/M
3300009147|Ga0114129_10107436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3854Open in IMG/M
3300009147|Ga0114129_11142972Not Available973Open in IMG/M
3300009147|Ga0114129_12426352All Organisms → cellular organisms → Bacteria → Proteobacteria628Open in IMG/M
3300009156|Ga0111538_10215781Not Available2432Open in IMG/M
3300009162|Ga0075423_10727262Not Available1049Open in IMG/M
3300010043|Ga0126380_11997196All Organisms → cellular organisms → Bacteria → PVC group530Open in IMG/M
3300010046|Ga0126384_10556554Not Available997Open in IMG/M
3300010359|Ga0126376_10360570Not Available1292Open in IMG/M
3300010361|Ga0126378_11484846Not Available768Open in IMG/M
3300010366|Ga0126379_10444044All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica1357Open in IMG/M
3300010373|Ga0134128_10047150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5001Open in IMG/M
3300010375|Ga0105239_11605626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium752Open in IMG/M
3300010398|Ga0126383_10748688Not Available1058Open in IMG/M
3300010403|Ga0134123_12594410Not Available574Open in IMG/M
3300012685|Ga0137397_10219304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1416Open in IMG/M
3300012927|Ga0137416_12177338All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300013104|Ga0157370_11293952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria657Open in IMG/M
3300013308|Ga0157375_10418184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1506Open in IMG/M
3300013308|Ga0157375_12624703Not Available602Open in IMG/M
3300014326|Ga0157380_12600417Not Available572Open in IMG/M
3300015195|Ga0167658_1010139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2934Open in IMG/M
3300015371|Ga0132258_10014733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria16655Open in IMG/M
3300017970|Ga0187783_10033003All Organisms → cellular organisms → Bacteria → Proteobacteria3838Open in IMG/M
3300017994|Ga0187822_10205046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae659Open in IMG/M
3300018053|Ga0184626_10022107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2588Open in IMG/M
3300018054|Ga0184621_10113989All Organisms → cellular organisms → Bacteria → Proteobacteria963Open in IMG/M
3300018422|Ga0190265_11581416All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300018429|Ga0190272_10712233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium906Open in IMG/M
3300018429|Ga0190272_10810880All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300018469|Ga0190270_10141716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1935Open in IMG/M
3300018469|Ga0190270_10347779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1346Open in IMG/M
3300018469|Ga0190270_10660406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1030Open in IMG/M
3300018481|Ga0190271_12946379Not Available571Open in IMG/M
3300019377|Ga0190264_11783014Not Available553Open in IMG/M
3300019884|Ga0193741_1077845Not Available852Open in IMG/M
3300021560|Ga0126371_12872662Not Available584Open in IMG/M
3300025885|Ga0207653_10004265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4493Open in IMG/M
3300025903|Ga0207680_10873051Not Available645Open in IMG/M
3300025908|Ga0207643_10175839Not Available1294Open in IMG/M
3300025921|Ga0207652_10220757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1708Open in IMG/M
3300025932|Ga0207690_11171759Not Available641Open in IMG/M
3300025942|Ga0207689_10219367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1571Open in IMG/M
3300026088|Ga0207641_10599711Not Available1078Open in IMG/M
3300026089|Ga0207648_11241346Not Available700Open in IMG/M
3300026118|Ga0207675_100250554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1714Open in IMG/M
3300027815|Ga0209726_10135973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB231402Open in IMG/M
3300027815|Ga0209726_10163052Not Available1225Open in IMG/M
3300027907|Ga0207428_10851216All Organisms → cellular organisms → Bacteria → Proteobacteria646Open in IMG/M
3300027909|Ga0209382_10002358All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria27665Open in IMG/M
3300027909|Ga0209382_11556760Not Available656Open in IMG/M
3300027952|Ga0209889_1055986Not Available820Open in IMG/M
3300031547|Ga0310887_10074109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium1610Open in IMG/M
3300031576|Ga0247727_10011049All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria15852Open in IMG/M
3300031576|Ga0247727_10047667All Organisms → cellular organisms → Bacteria5315Open in IMG/M
3300031890|Ga0306925_11030886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae837Open in IMG/M
3300031944|Ga0310884_11059176Not Available506Open in IMG/M
3300031954|Ga0306926_12032759Not Available645Open in IMG/M
3300031965|Ga0326597_10484257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1352Open in IMG/M
3300031965|Ga0326597_10643589Not Available1126Open in IMG/M
3300032001|Ga0306922_10580290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae1190Open in IMG/M
3300032013|Ga0310906_10671401All Organisms → cellular organisms → Bacteria → Proteobacteria721Open in IMG/M
3300034155|Ga0370498_006973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2348Open in IMG/M
3300034178|Ga0364934_0366373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. CS1GBMeth3546Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere23.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.19%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.78%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.85%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.93%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.93%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11393159813300000956SoilMKLPHQMRPANRYARESAVGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFITRFGENFPAIELRKHLRCAGCRGRVANLHESSR*
Ga0062589_10030908523300004156SoilMKEPHEMRPGNRYARERGESHTLGDLVRAKKALVVICRHCKHRRLLCPANLIPRFGESCPAITLRERLRCT*
Ga0062589_10114681613300004156SoilMKQPHEMPPGNRYARERGEGRTLGELVRAKMALVAICRRCKHRRLIYPANLIPRFGEGYPAIQLRVRLRCT
Ga0062595_10112753513300004479SoilMFVGVQHFRRSVVKKPHELRPGNRYARETGAGRTLGQLMDSKMALVAVCRRCKHRSVLYPRNLIPRFGEDCPAIELRQRLRCSACRYGSANLHESAR*
Ga0062592_10025915513300004480SoilMKAPHQMRPGNRYAREAGVGRTLGELVHSKMALVAVCRRCNHRRLLYPANLIPQFGEGFPAIELRERLRCSGCRGRMANLHESSR*
Ga0062591_10047717423300004643SoilVPPTKAPHQMRPGNRYARGAGVGRTLGELVHSKMALVAVCRRCNHRRLLYPANLIPQFGEGFPAIELRERLRCSGCRGRMANLHESSR*
Ga0062594_10001171253300005093SoilMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR*
Ga0070676_1011761433300005328Miscanthus RhizosphereMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0070683_10169121513300005329Corn RhizosphereMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR*
Ga0066388_10031886123300005332Tropical Forest SoilMVAGGPFWDHLAVPMKPPHLLRPGNRYARERGIGRTLGELVRAKMALVAICRRCKHRRVLYPANFIPRFGGDLPAIELQQHLHCSSCRGRMANLHESSR*
Ga0070687_10069205213300005343Switchgrass RhizosphereQMRPGNRYAREEGIGRTLGQLVAAKMAFVAVCRRCKRQRVLYPANLIPQFGEDFPAIELRQHLRCSGCRGRVANLHESSR*
Ga0070692_1011460313300005345Corn, Switchgrass And Miscanthus RhizosphereMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRVANLHESSR*
Ga0070688_10046197713300005365Switchgrass RhizosphereHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0070701_1073823523300005438Corn, Switchgrass And Miscanthus RhizosphereDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0070662_10156174113300005457Corn RhizosphereMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHASSR
Ga0070698_10015046513300005471Corn, Switchgrass And Miscanthus RhizosphereTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR*
Ga0070686_10031645523300005544Switchgrass RhizosphereMKEPHEMRPGNRYARERGESHTLGDLVRAKKALVVICRHCKHRRLLCPANLIPRFGESCPAITLRERLRCTQCRYRSANLHECSR*
Ga0070686_10107003523300005544Switchgrass RhizosphereMKAPHQMRPGNRYAREGGIDRTLGQLVAAKMALVAVCRRCKRQRVLYPANLIPQFGEDFPAIELRQHLRCSGCRGRVANLHESSR*
Ga0066693_1035661023300005566SoilLDADRHVGRTLGQMTLAKMALVAICRRCKHRRVLYPADFISRYGENFPVIELRKHLRCTSCRGRMA
Ga0068861_10021635753300005719Switchgrass RhizosphereALDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0066903_10087442443300005764Tropical Forest SoilMVAGGPFWDHLAVPMKPPHLLRPGNRYARERGIGRTLGELVRAKMALVAICRRCKHRRVLYPANFIPRFGGDLPAIELQQHLRCSSCRGRMANLHESSR*
Ga0066903_10362341823300005764Tropical Forest SoilMKRPHQMRPGNRYAREAGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPANLIVRFGEDCPAIALRDRLRCTNCRYGAANLHEASR*
Ga0068863_10076059713300005841Switchgrass RhizosphereVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGGMANLHESAR*
Ga0068860_10216609223300005843Switchgrass RhizosphereMKAPHQMRPGNRYAREEGIGRTLGQLVAAKMALVAVCRRCKHRRMLYPANLIPEFGEDFPPIELRQRLRCSGCRGRMAN
Ga0081539_1018138223300005985Tabebuia Heterophylla RhizosphereVAGLTPVKRPHEMRPGSRYARETGVGRTLGQLVQSKIALVAVCRRCKHRRLLFPANLIDGFGENFPAIELRARLRCTQCRGRMANLHESAR*
Ga0066652_10082910013300006046SoilRSLQAAPSPSSRRPLPRMKTPHQMRPGNRYARENGIGRTLGQLVAAKMALVAVCRRCKHRRVLYPANLIPEFGDDFPAIELRQRLRCSSCRRRMANLHESSR*
Ga0075421_10083567733300006845Populus RhizosphereMRPGNRYARETGAGRTLGQMVSAKMALVAVCRRCKHRRLLYPANFIPRFGEGFPAIELGPHLRCSNCRGRMANLHESSR*
Ga0075431_10032105323300006847Populus RhizosphereMKPPNEMRPGNRYAREGGTGRTLGQFASAKTELVAVCRRCKHWRVLFTANLIARYGANFPALALHERLRCTNCSGRVANLHESSR*
Ga0075431_10128958223300006847Populus RhizosphereMRERGRTLGELASAKMALVAVCRRCKHRRVLFAANLIARYGENFPTPALRERLRCSNCRGRVANVYQSSR*
Ga0075433_1036292843300006852Populus RhizosphereVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0075433_1087572123300006852Populus RhizosphereMKVPHQMRSGNRYAREGGIARTLGQLVAAKMALVAVCRRCKHRRLLYPVNLIPRYGEDFPAVELRDRLRCSGCRGRVANLHESSR*
Ga0075425_10020979563300006854Populus RhizosphereNPLRRSPAFPCGGSLDQVHVSMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0075434_10149028123300006871Populus RhizosphereGSLDQVHVSMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0075429_10001152393300006880Populus RhizosphereMRPGNRYAREDGIGRTLAQLVTAKMALVAVCRRCKHRRVLYPANLIPLYGENFPAIELRMRCTSCRGRMANLHESSR*
Ga0075429_10182957113300006880Populus RhizosphereMKAPHQMRPGNRYAREGGIDRTLGQLVAAKMALVAVCRRCKRQRVLYPANLIPQFGEDFPAIELRQRLRCSGCRGRVANLHESSR*
Ga0079218_1171831223300007004Agricultural SoilMVPPMKTPHEMRPGNRYARERGVGRTLGDLVRAKMALVAVCRRCKHRRLIHPANLIARYGETFVAIDLVPRLRCSGCRSRSPNLHESAR*
Ga0111539_1012909923300009094Populus RhizosphereMRPGNRYAREDGIGRTLAQPVAAKMALVAVCRRCKLRRVLYPANLIPLYGENFRAIELRQRMRCTSCRRRMANLHESSR*
Ga0111539_1180584313300009094Populus RhizosphereRPLPRMKAPHQMRPGNRYARETGVGRTLGELVRTKMALVAVCRRCKHRRLLYPANLIPQFGEHLPAIELRQRLRCSGCKGTVANLHESSR*
Ga0111539_1322445723300009094Populus RhizosphereLPLAARSLQAAPLPMKLPHQMRPGNRYARETGASRTLGQMVRAKMALVAVCRRCKHRRVIYPANLIPQFGEGFPAIELRERLRCSGCRGRMANLHESSR*
Ga0105245_1250114623300009098Miscanthus RhizosphereMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAA
Ga0075418_1021579323300009100Populus RhizosphereMMAPHQMRPGNRHARDAAIGRSLGELVRSKMALVAVCRRCKHRRLLYPANLIPSFGESFPATELRKRLRCSGCRARMANLHESSR*
Ga0075418_1095517833300009100Populus RhizosphereMKQPHEMRPGNRYAREGGTGRTLGQFASAKTELVAVCRRCKHWRVLFTANLIARYGANFPALALHERLRCTNCSGRVANLHESSR*
Ga0075418_1115775913300009100Populus RhizosphereMKASQQMRPGNRYAREAAIGRTLGELVRSKMALVAVCRRCKHRRLLYPANLVLSFGEDFPAMELRKRLRCSGCRGRVANLHESSR*
Ga0075418_1118177113300009100Populus RhizospherePKMRERGRTLGELASAKMALVAVCRRCKHRRVLFAANLIARYGENFPTPALRERLRCSNCRGRVANVYQSSR*
Ga0075418_1152156523300009100Populus RhizosphereMKAPHQMRPGNRYARETGVGRTLGELVRTKMALVAVCRRCKHRRLLYPANLIPQFGEHLPAIELRQRLRCSGCKGTVANLHESSR*
Ga0114129_1010743673300009147Populus RhizosphereMRPGNRYARETSTGRTLGQIVRAKMALVAVCRRCKHRRVLYPANLIPIYGAMELRKHLRCTGCRACIANLHESSR*
Ga0114129_1114297233300009147Populus RhizosphereMKALHHMRPGSRYAREEGIGRTLEQLVAAKMALVAVCRRCKHRRLLYPANLIPQYGEDFPAVELRDRLRCSGCRGRVANLHESSR*
Ga0114129_1242635223300009147Populus RhizosphereRKTGASRTLGELVRARMALVAVCPRCKHRRLLYPANLIPQFGQGFPAIELRERLRCSGCRGRMANLHESSR*
Ga0111538_1021578153300009156Populus RhizosphereMKAPHQMRPGNRYAREGGTDRTLGQLVAAKMALVAVCRRCKRQRVLYPANLIPQFGEDFPAIELRQHLRCSGCRGCVANLHESSR*
Ga0075423_1072726213300009162Populus RhizosphereMKVPHQMRPGNRYAREGGIARTLGQLVAAKMALVAVCRRCKHRRLLYPANLIPQYGEDFPAVELRDRLRCSGCRGRVANLHESSR*
Ga0126380_1199719623300010043Tropical Forest SoilMKLPHQMRPGNRYARETGVSRTLGQMVRNKMALVAVCRRCKHRRVLYPANLVPLYGEDFPAIELRQHMRCTGCRGRMANLRGSAR*
Ga0126384_1055655423300010046Tropical Forest SoilMKLPHQMRSGSRYARETAISRTLGQMVRAKMALVAVCRRCKHRRVLYPANLVPLYGDDFPAIKLRQRMRCTTCGGRMANLHESSR*
Ga0126376_1036057013300010359Tropical Forest SoilMKRPHQMRPGNRYARETGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPGNLIARFGEDCPAIALRDRLRCTNCRYGAANLHEASR*
Ga0126378_1148484613300010361Tropical Forest SoilMKRPHQMRPGNRYARETGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPANLIVRFGEDCPAIALRDRLRCTNCRYGAANLHEASR*
Ga0126379_1044404413300010366Tropical Forest SoilMKRPHQMRPGNRYAREAGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPGNLIARFGEDCPAIALRDRLRCTNCRYGAANLHEASR*
Ga0134128_1004715053300010373Terrestrial SoilMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLTERYGENYLAIALRERLRCTSCRGRAANLHESSR*
Ga0105239_1160562633300010375Corn RhizosphereAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR*
Ga0126383_1074868823300010398Tropical Forest SoilMKRPHQMRPGNRYARETGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPANLIARFGEDCPAIALRDRLRCTNCRYGAANLHEASR*
Ga0134123_1259441013300010403Terrestrial SoilMKLPHQMRPGNRYAREAGIGRTLGEMVRAKMALVVVCRRCKHRRLLYPANLIPQFGEDFPAIELRERLRCSGCWGRMANLHESSR*
Ga0137397_1021930423300012685Vadose Zone SoilMAVPMKAPHHMRPGNRDARESGASRTLGEMVRAKMALVAVCRRCKHRRLLYPANLIPEFGEDFPAIELRERLRCSGCKGRVANLHESSR*
Ga0137416_1217733813300012927Vadose Zone SoilMKPPHQLRPGNRYARETSTGRTLGEMVLAKMALVSVCRRCKHRRLLYPANLIPQFGEDFPAIELRQRLRCSGCKGRVANLHESSR*
Ga0157370_1129395233300013104Corn RhizosphereAAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR*
Ga0157375_1041818443300013308Miscanthus RhizosphereAPPPSPAGGSIALDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR*
Ga0157375_1262470313300013308Miscanthus RhizosphereREGGIGRTLGQLVAAKIALVAVCRRCKHRRVLYPANLIPIYGENCAAIELRQRMRCTSCRGRTANLHESSR*
Ga0157380_1260041713300014326Switchgrass RhizosphereMKQPHEMRPGNRYAKERGEGRTLGELARAKMALVAVCPRCKHRRVLYPASLIEQFGEACPAISLRPRLRCSGCRRRSPNLHESAR*
Ga0167658_101013923300015195Glacier Forefield SoilMPMKPLHLLRPGNRYARETGIGRTLGKLVHAKMALVAMCRRCKHRRVLYPANFIPRFGEDYPAIELRHRLRCSGCRGRMANLHESAR*
Ga0132258_1001473353300015371Arabidopsis RhizosphereMKLPHEMRRGNRYAREAGLGRTLGELASAKMAPVAGCAGAASTAAFFFTANLITRYGENFPALALRERLRCSTCCGRMANLHESSR*
Ga0187783_1003300343300017970Tropical PeatlandMRAGNRYAREIGRTLGQLVNEKMALVAVCRRCKHRRVLFPANYIARFGENFPAIGLRDRLRCSSCRGRTASLHESAR
Ga0187822_1020504623300017994Freshwater SedimentMKLPHRMRPGNHYARETGASRTLGELVRAKMALVAVCRRCKHRRVLYPANFIPVFGEDYPAIELRHRLRCSACRGRIANLHESSR
Ga0184626_1002210723300018053Groundwater SedimentMKPPHQMRPGSRYARETGSSRTLGELVRAKMALVAICRQCKHRRVIYPANLIDRFGEDCPAIELGQRLRCTLCRYRCANLHESSR
Ga0184621_1011398933300018054Groundwater SedimentMKLPHQMRPGNRYARETGAGRTLGQMVSAKMALVAVCRRCKHRRVLYPANLIAGYGEHFPAIELRPHLRCSGCRGRMANLHESSR
Ga0190265_1158141623300018422SoilMKQPHEMRPGNRYARERGEGKTLGELVRAKMALVAICRRCKHRRLIYPANLIPRFGEGYPAIELRVRLRCTGCRARSPNLHESTR
Ga0190272_1071223313300018429SoilMETTQQGFPLMKQPHEMRPGNRYAKERSEGKTLGELVRAKMALVAVCPRCKHRRLLHPARLIDELGENYPAINLRPRLRCTSCHHRSPNLHEASR
Ga0190272_1081088013300018429SoilMKLPHQLRPGNRYARETGTGRTLGEMVSAKMALVAVCRRCKHRRVLYPANLIARYGEHFPAIELRPHLRCSGCRGRVANLHESSR
Ga0190270_1014171623300018469SoilMVPPMKAPHEMRPGNRYARERGVGRTLGDLVRAKRALIAVCRRCKHRRLIHPANLIARYGENFVAIDLVPRLRCSGCRSRSPNLHESAR
Ga0190270_1034777923300018469SoilGFVAATTIFRFACMKPPNEMRPGNRYAREGGAGRTLGQFASAKTELVAVCRRCKHWRVLFTANLIARYGANFPALALHERLRCTNCSGRVANLHESSR
Ga0190270_1066040623300018469SoilMKLPHQMRPANRYARESGVGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFITRFGENFPAIELRKHLLCAGCWGRVANLHESSR
Ga0190271_1294637923300018481SoilMPMKLPHQMRPANRYARESGVGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFITRFGENFPAIELRKHLLCAGCWGRVANLHESSR
Ga0190264_1178301423300019377SoilMKQPHEMRPGNRYARERGEGRTLGELARAKMALVAICSHCKHRRVLYLVEQFGEGSPAISLRLRLRCTGCRRRSPNLHESAR
Ga0193741_107784513300019884SoilHAGEAAAGRSLGELVRSKMALVAVCRRCKHRRLLYPANLIPSFGESFPAIELRKRLRCSGCHGRMANLHESSR
Ga0126371_1287266213300021560Tropical Forest SoilMKRPHQMRPGNRYARETGSGRTLGDMLRAKMALVAVCRRCKHRRVLYPGNLIARFGEDCPAIALRDRLRCTNCRYGAANLHEASR
Ga0207653_1000426523300025885Corn, Switchgrass And Miscanthus RhizosphereMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR
Ga0207680_1087305123300025903Switchgrass RhizosphereMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR
Ga0207643_1017583933300025908Miscanthus RhizosphereMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHE
Ga0207652_1022075713300025921Corn RhizosphereYPASGPRVCGRRPLGVRMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR
Ga0207690_1117175913300025932Corn RhizosphereCDAPPPSPAGGSIALDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR
Ga0207689_1021936713300025942Miscanthus RhizosphereAREAGVGRTRGELASAKMTLVAVCRLCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR
Ga0207641_1059971113300026088Switchgrass RhizosphereIAGLDPAIHAGGSIALDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCRHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGGMANLHESAR
Ga0207648_1124134623300026089Miscanthus RhizosphereMSSAMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR
Ga0207675_10025055453300026118Switchgrass RhizosphereVASPCDAPPPSPAGGSIALDQVHVPMKPPHLLRPGNRYARERGGRTLGDLVRAKMALVAVCRRCKHRRLLYPANLIPRFGETCPAINLREHLRCSSCRGRMANLHESAR
Ga0209726_1013597333300027815GroundwaterMPMKPPHLQRPGNRYAHGTGIGRTLGELVRAKMALVAVCRRCKHRRVLYPANYIQRFGEDYPAIELRHRLRCSG
Ga0209726_1016305213300027815GroundwaterMKPPHQLRPGNRYARETGIGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFIDRFGEDLPAIEIRKHLRCSSCRGRMANLHESSR
Ga0207428_1085121613300027907Populus RhizosphereYARETGVGRTLGELVRTKMALVAVCRRCKHRRLLYPANLIPQFGEHLPAIELRQRLRCSGCKGTVANLHESSR
Ga0209382_10002358433300027909Populus RhizosphereMRPGNRYAREDGIGRTLAQLVTAKMALVAVCRRCKHRRVLYPANLIPLYGENFPAIELRMRCTSCRGRMANLHESSR
Ga0209382_1155676013300027909Populus RhizosphereRYARETGAGRTLGQMVSAKMALVAVCRRCKHRRLLYPANFIPRFGEGFPAIELGPHLRCSNCRGRMANLHESSR
Ga0209889_105598613300027952Groundwater SandMMAPHQMRPGNRHAREAAIGRSLGELVRSKMALVAVCRRCKHRRLLYPANLIPSFGESFPAIELRKRLRCSGCRGRMANLHESSR
Ga0310887_1007410933300031547SoilMKQPHEMRPGNRCAREAGVGRTLGELASAKMTLVAVCRMCKHRRVLFPASLIERYGENYPAIALRERLRCTSCRGRAANLHESSR
Ga0247727_10011049143300031576BiofilmMKPPHEMRPGNRYAREPGVGRTLGQLVSAKMALVAVCRRCKHRRVIFPANLTGRYGENFPAIELRERLRCSGCRGRMANLHESSR
Ga0247727_1004766743300031576BiofilmMKPPHEMRPGNRYAREPGVARTLGQLVSAKMALVAVSRRCKHRRVIFPASLVERYGENFPALALRDRLRCSSCRGRMANLHESSR
Ga0306925_1103088623300031890SoilMRAGNRYAREIGRTLGQLVNEKMALVAICRRCKHRRVLFPANYISRFGENFPAIGLRDRLRCSSCRGRMASLHESAR
Ga0310884_1105917623300031944SoilARPPGGAGPAGGAFTIAMPMKLPHQMRPANRYARESGVGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFITRFGENFPAIELRKHLLCAGCWGRVANLHESSR
Ga0306926_1203275923300031954SoilMRPGNRYARERGFSRTLGQLVDAKMALVAICRRCIHQRVLYPANFIDRFGADCPAIELREHLRCSGCRGRMANLPRVRPLIPALHEEPGD
Ga0326597_1048425723300031965SoilMPIKPPHQMRPGNRYAHETGSGRTLGQLVRAKMALVVVCRRCKHRRVLYPANLIARFGENCPGIELRTRLRCSSCRGRMANLHESSR
Ga0326597_1064358923300031965SoilMRPGNRYARETGSGRTLGQLVCAKMALVVVCRRCKHRRVIYPANLIARFAEDCPAIELRHRLRCSSCRGRMANLHESSR
Ga0306922_1058029023300032001SoilMHAGNRYAREIGRTLGQLVNEKMALVAICRRCKHRRVLFPANYISRFGENFPAIGLRDRLRCSSCRGRMASLHESAR
Ga0310906_1067140113300032013SoilMPMKLPHQMRPANRYARESGVGRTLGQLVLAKMALVAVCRRCKHRRVLYPANFITRFGENFPAIELRKHLRCAGCWGRVANLHESSR
Ga0370498_006973_1284_15233300034155Untreated Peat SoilMRPGNRYARETGASRTLGELVRAKMALVAVCRRCKHQRLLYPANFIPQFGGGFPAIELRERLRCSGCRGRMANLHESSR
Ga0364934_0366373_2_2383300034178SedimentVKCLEEIRPGNRYARESGAGRTLGQMVQAKMALVAICRRCKHQRVLYPASLIARYGENLPAIELRERLRCSNCRYRSAN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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