Metagenome Family F090009

Basic Information
Family ID	F090009
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	71 residues
Representative Sequence	MLRTSRTYRRGVLALTWLGEWRLPAPERRAARAEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Number of Associated Samples	71
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (42.593 % of family members)
Environment Ontology (ENVO)	Unclassified (45.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.296 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.08% β-sheet: 0.00% Coil/Unstructured: 45.92%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12697	Abhydrolase_6	46.30
PF00583	Acetyltransf_1	5.56
PF02776	TPP_enzyme_N	1.85
PF05991	NYN_YacP	1.85
PF13432	TPR_16	0.93
PF08445	FR47	0.93
PF16582	TPP_enzyme_M_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	1.85

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.70%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.41%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.37%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Ice	Environmental → Aquatic → Freshwater → Ice	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	42.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	18.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_108688531	3300001686	Soil	LTRLRPGVASAPMLRTTRVARRGQAAVAWLGEMRLPAGERRAARAERAALRRLRLERDNTQHTPWARAAALEAER
Ga0063454_1001080592	3300004081	Soil	MLRTSRTYRRGVQALTWLGEWRLPPPERRAARAERETERRLYLERDDTTHASWRRQERVDAERRRWAGWE*
Ga0063454_1002840722	3300004081	Soil	MLRTSRTYRRGVTALTWLGEWRLRPPERRAARAERATERRLWLERDDTRYMPWRRQEALE
Ga0063454_1014736481	3300004081	Soil	MLRTTRTARRGRAALTWIGEWGLPAPERRAARAERATLARMRLERDNTLHTPWARAAALEAERRRWNVYGM*
Ga0063455_1001114862	3300004153	Soil	MLRTTRVARRGQAAVAWLGEMRLPAGERRAARAERAALRRLRLERDNTQHTPWARAAALEAERRRWGAYPWSLGGDP*
Ga0070683_1003438021	3300005329	Corn Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT*
Ga0070661_1014921901	3300005344	Corn Rhizosphere	MLRTTRAARRGQAVLERLGELRLPAGERRAARAERAALKRLRLERDNTQHTPWARAAALEAERRRWGCHPGLYGDP*
Ga0070671_1008632472	3300005355	Switchgrass Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE*
Ga0070674_1018132412	3300005356	Miscanthus Rhizosphere	MLRTTRTARRGRAAVTWLAEWRLPAGERRAARAERATLRMLSLERDNTKHTPWARAAALEAERRRDGGCLLLWDP*
Ga0070667_1021707511	3300005367	Switchgrass Rhizosphere	RKRSYLRAMLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE*
Ga0070700_1009356252	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLARDDTQHMPWRRQEALE
Ga0070662_1011477982	3300005457	Corn Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPAPERRAARAERETERRLYLERDDTTYASWRRQER
Ga0068856_1023266832	3300005614	Corn Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQGALEAERRRWAGWE*
Ga0070702_1012873401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT*
Ga0068852_1011749692	3300005616	Corn Rhizosphere	MFRTTRTARRGRAAVTWIGEWKLPAPERRAARAERATLAAMRLERDNTLHTPWARAAALEAERRRWNIHWM*
Ga0075420_1015150212	3300006853	Populus Rhizosphere	MLRTSRTVRRGLTALTWLGEWRLPAPERRAARSERAVLRRLSLERDNVKYTPWARAAALEAERRRDNLCT
Ga0068865_1016160432	3300006881	Miscanthus Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPAPERRAARAERETERRLYLERDDTTYASWRRQERLDAERRRWAGWE*
Ga0105242_128107081	3300009176	Miscanthus Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEA
Ga0126307_100589992	3300009789	Serpentine Soil	MLRTTRTARRGRAAITWLSEWWLPAPERHAARAERMALRMLARERDNVEHTPWARAAALEAERRRDGGCLLMWDP*
Ga0126307_105802352	3300009789	Serpentine Soil	MIRTTRTARRGLAALTWLAEWRLPAGERRAARAERAALQMLSLERDNTEHTAWRRAAALEAERRRDGGCLLLWDP*
Ga0126307_106619181	3300009789	Serpentine Soil	MLRTTRTARRGRAAVTWLAEWRLPGPERRAARTERAVLRQLTLQRDNTEYTPWARAAALEAERRRDGGCLLLWDP*
Ga0126307_107088531	3300009789	Serpentine Soil	MLRTTRTARRGQAAVAWLGEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126307_107548081	3300009789	Serpentine Soil	MLRTTRAARRGQAALAWLGEMRLPAPERRAARAERAVLRRLRLERDNTEHTPWARAAALEAERRRWGGFGPDSWGRL*
Ga0126307_108180872	3300009789	Serpentine Soil	MFRTTRTARRGRAALTWMGEWRLPAPERRAARAERATLARMRLERDNTLYTPWARAAALEAERRRWNVYGI*
Ga0126313_110631131	3300009840	Serpentine Soil	MLRTTRAARRGQAAVTWLGELRLPAAERRAARAERAVMRRLRLERDNTEHTPWARAAALEAE
Ga0126313_112121592	3300009840	Serpentine Soil	MLRTTRAARRGQAALTWLTEMRLPAGERRAARFERAALQQLRLERDNVEHTPWARAAALEAERRRWGGHPALFRDP*
Ga0126313_115823732	3300009840	Serpentine Soil	MLRTTRAARRGQAAVVWLGEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126304_106292532	3300010037	Serpentine Soil	SMLRTTRTARRGRAAITWLSEWWLPAPERHAARAERMALRMLARERDNVEHTPWARAAALEAERRRDGGCLLMWDP*
Ga0126309_100053126	3300010039	Serpentine Soil	MFRTTRTARRGRAAITWLGEWRLPPPERRAARAERATLRRLRLERDNTLYTPWARAAALEAERRRWGGYWI*
Ga0126309_107148722	3300010039	Serpentine Soil	MLRTTRTARRGQAAVVWLGEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126308_103842002	3300010040	Serpentine Soil	MLRTTRTARRGRAAITWLSEWWLPAPERHAARAERTALRMLARERDNVEHTPWARAAALEAERRRDGGCLLMWDP*
Ga0126314_100808546	3300010042	Serpentine Soil	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARAERDVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT*
Ga0126314_103185822	3300010042	Serpentine Soil	MLRTTRAARRGQAAVVWLGEIRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126314_108488471	3300010042	Serpentine Soil	MFRTSRTARRGRAAATWVAEWRLPRSDRRAARAERATLAALALERDNTEHTPWARAAALEAEQRRWGGPFVWDP*
Ga0126310_103283851	3300010044	Serpentine Soil	MLRTTRAARRGQAAVAWLGEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAE
Ga0126310_115799402	3300010044	Serpentine Soil	MLRTTRVARRGQAAVAWLGEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126311_106992241	3300010045	Serpentine Soil	ASAPMLRTTRVARRGQAAVAWLAEMRLPAGERRAARAERAALRRLRLERDNTEHTPWARAAALEAERRRWGAYPWSLGDP*
Ga0126306_105369912	3300010166	Serpentine Soil	MFRTTRTARRGRAALTWMGEWRLPGPERRAARAERATLARMRLERDNTLYTPWARAAALEAERRRWNVYGM*
Ga0134123_125608811	3300010403	Terrestrial Soil	SRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT*
Ga0150985_1023717622	3300012212	Avena Fatua Rhizosphere	FRSRTYRRGVAALTWVGEWRLPGPERRAARAERETERRLYLERDDTRYMPWRRQEALEAERRRWAGWE*
Ga0150985_1052405312	3300012212	Avena Fatua Rhizosphere	CALPICRTYRRGVQALTWLGEWRLPPPERRAARAERETERRLYLERDDTTHASWRR*
Ga0136614_103101282	3300012684	Polar Desert Sand	MLRTSCAARRGRAAVAWLGEMRLPAGERRAARAERATLRQMRLERDNTEHTPWARAAALDAERRRWGGSYPGIGGGP*
Ga0157285_102355622	3300012897	Soil	MFRTTRTARRGRAALTWMGEWRLPGPERHAARAERATLRRMRLERDNTLYTPWARAAALEAERRRWNVYGM*
Ga0157372_123555051	3300013307	Corn Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAEPRRWAG
Ga0163163_115037901	3300014325	Switchgrass Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMAWRLQEALEAERRRW
Ga0136617_1000040614	3300017789	Polar Desert Sand	MFRTTRTARRGRAALTWMGEWRLPAPERRAARAEQAALRAQRLERDNTLHTPWARAAAVEAERRRWSGYGM
Ga0190266_109223162	3300017965	Soil	MLRTSRTYRRGVLALTWLAEWRLPPPERRAARSEREVERQLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0184618_103095902	3300018071	Groundwater Sediment	TMLRTTRTARRGRAALTWVGEWRLPAPERRAARAERATLAALRLERDNTEHTPWARAAALEAERRRWGSYGIL
Ga0190265_101093463	3300018422	Soil	VAHMLRTTRTFRRGQAAMTWLAEWRLPPPERRAARSARETERRMRLERDNFEHTAWARAAQTDAERRRWAGWGE
Ga0190265_102141843	3300018422	Soil	MLRTSRTWRRGQAALTWLAEWRLSGPERRAARAERATLAALSLERDNFEHTPWRRAAAVEAERRRFNGWGY
Ga0190265_102179922	3300018422	Soil	MFRTTRTARRGRAALTWMGELRLPGPERRAARAERATLRALRLERDNTLYTPWARAAALEAERRRWSGCM
Ga0190265_105013292	3300018422	Soil	MFRTTRTARRGRAALTWLGEWRLPGPERNAARAERATLRALRLERDNTQHTPWARAAALEAERRRWGSYGV
Ga0190265_109090612	3300018422	Soil	MLRTSRTYRRGQAALTWLGEWRLPGPERRAARSARAVEQRMRLERDNTEHTPWRRAAALEAERRRWAGWS
Ga0190265_109973491	3300018422	Soil	TRTARRGRAALTWLGEWRLPGPERNAARAERATLRALRLERDNTQHTPWARAAALEAERRRWGSYGV
Ga0190265_111844382	3300018422	Soil	MLRTTRTFRRGQAALTWLGERRLPPPERRAARAALAVEQRMRLERDNVEHTAWRPAAAVEAERKRWAGWGS
Ga0190272_103279512	3300018429	Soil	MFRTTRTARRGRAALTWLGEWRLPGPERHAARAERATLRALRLERDNTQHTPWARAAALEAERRRWGSYGV
Ga0190272_112473942	3300018429	Soil	VAHMLRTTRTFRRGQAAMTWLGEWRLPPPERRAARTAREVERRMRLERDDAEHSQWAREARVDAERRRWAGWGE
Ga0190272_130576832	3300018429	Soil	MFRTTRTARRGRAALTWMGEWRLPGPERHAARAERATLRRMRLERDNTLHTPWARAAALEAERRRWNVYGM
Ga0190275_102999653	3300018432	Soil	MFRTTRTARRGRAALTWMGEWRLPGPERDAARAERATLRRMRLERDNTLHTPWARAAALEAERRRWNVYGM
Ga0190275_103908072	3300018432	Soil	MFRTTRTARRGRAALTWIGEWRLPGPERRAARAERATLRALRLERDNTLYTPWARAAALEAERRRWGGYWI
Ga0190275_104547922	3300018432	Soil	MLRTSRTVRRGMTALTWVAEWRLPAPERRAARAERAVLRRLSLERDNVRHTPWARAAALEAERRRDCLFTATWDP
Ga0190275_109848281	3300018432	Soil	MFRTSRTARRGRAALTWLGEWRLPAPERRAARAERAVLAALRLERDNTLYTPWARAAELEAERRRWGGYGI
Ga0190275_110667251	3300018432	Soil	MFRTTRTARRGRAALTWLGEWRLPGPERHAARAERATLRALRLERDNTQHTPWARAAALEAERRRWGSYGI
Ga0190275_121838292	3300018432	Soil	MFRTTRTARRGRAALTWLGEWRLPAPERRAARAERAVLAALRLERDNTLYTPWARAAELEAERRRWGGYGI
Ga0190275_123716592	3300018432	Soil	MFRTTRTARRGRAALTWMGEWRLPGPERHAARAERATLRRMRLERDNTLHTPWARAAALEAERRRWNVYG
Ga0190275_126129532	3300018432	Soil	VLRTTRTYRRGQAALTWLGEWRLPAPERRAARAARDAERRMWLERDDTSHLPSRRAAATEAERRRWAGWGE
Ga0190270_100129894	3300018469	Soil	MLRTSRTVRRGLTAATWVAEWRLPGPERRAARAERAVLRRLSLERDNVLHTPWARAAALEAERRRDSLFTLTWDP
Ga0190270_111337942	3300018469	Soil	VRPTMFRTTRTARRGRAALTWLGEWRLPGPERNAARAERATLRALRLERDNTQHTPWARAAALEAERRRWGSYGI
Ga0190270_130149212	3300018469	Soil	VAHMLRTTRTFRRGQAAMTWLGEWRLPPPERRAARTAREVERRMRLERDDTEHSAWARAARVDAERRRWAGWGE
Ga0190274_100708452	3300018476	Soil	MLRTTRTARRGRAAITWLAEWRLPAPERRAARAERTVLRALAIERDNVEHTPWARAAALEAERRRDGGCLLMWDP
Ga0190271_111849362	3300018481	Soil	MLRTSRTVRRGLTAATWVAEWRLPGPERRAARAERAVLRRLSLERDNVLHTPWARAAAL
Ga0190273_108730451	3300018920	Soil	RGRAAVTWIGEWRLPGPERRAARAERATLRALRLERDNTLYTPWARAAALEAERRRWGGYWI
Ga0190273_110337442	3300018920	Soil	MFRTTRTARRGRAAITWLAEWWLPAPERHAARAERMALRTLALERDNVEHTPWARAAALEAERR
Ga0190267_105231012	3300019767	Soil	MFRTTRTARRGRAALIWIGEWKLPAPERRAARAERATLAAMRLERDNTLYTPWARAAALEAERRRWNVYGM
Ga0190267_110704552	3300019767	Soil	MLRTSRTYRRGTRALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0222622_100901103	3300022756	Groundwater Sediment	MVRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0222622_110494581	3300022756	Groundwater Sediment	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARAERETERRLYLERDDTTYASWRRQERVDAERRRWAGWE
Ga0207640_115458371	3300025981	Corn Rhizosphere	YRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0207708_103393191	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LRTSRTYRRGVLALTWLGEWRLPAPERRAARAERETERRLYLERDDTTYASWRRQERLDAERRRWAGWE
Ga0207702_107608061	3300026078	Corn Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQE
Ga0207675_1016184271	3300026118	Switchgrass Rhizosphere	RRKRSYPRAMLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0207428_104739372	3300027907	Populus Rhizosphere	MLRTSRTYRRGVLALTWLGEWRLPAPERRAARAERETERRLYLERDDTTYASWRRQERLDAERRRWAGWE
Ga0247828_108939981	3300028587	Soil	MLRTTRTVRRGRAALTWLAEWRLPAPERRAARAERAVLRRLALERDNVAYTPWARAAALEAERRRDGGCLLMWDP
Ga0247822_106788422	3300028592	Soil	MFRTTRTARRGRAALVWLGEWRLPAPERRAARAERATLARIRLERDNTLYTPWARAAALEAERRRWNVYGM
Ga0247820_105878251	3300028597	Soil	TRTVRRGRAALTWLAEWRLPAPERRAARAERAVLRRLALERDNVAYTPWARAAALEAERRRDGGCLLMWDP
Ga0247819_105993852	3300028608	Soil	MLRTSRTYRRGVLALTWLGEWRLPAPERRAARAEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0307291_10423662	3300028707	Soil	MVRTSRTYRRGVLALTWLGEWRLPPPERRAARAERETERRLYLERDDTTYASWRRQERVDAERRRWAGWE
Ga0307322_100470092	3300028710	Soil	VLRTSRTYRRGLLALTWLGEWRLPSAERRAARAEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0307309_101072541	3300028714	Soil	VRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0307298_100990022	3300028717	Soil	MLRTSRTYRRGTRALTWLGEWRLPPPERRAARTEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGCGT
Ga0307318_100740543	3300028744	Soil	VLRTSRTYRRGLLALTWLGEWRLPSAERRAARAEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0307318_100966022	3300028744	Soil	PMLRTSRTYRRGTRALTWLGEWRLPPPERRAARTEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0307316_100245381	3300028755	Soil	MVRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAER
Ga0307316_101658221	3300028755	Soil	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARAERETERRLYLERDDTTHASWRRQERVDAERRRWAGWE
Ga0307306_100110515	3300028782	Soil	RTSRTYRRGVLALTWLGEWRLPPPERRAARAERETERRLYLERDDTTYASWRRQERVDAERRRWAGWE
Ga0307283_100242892	3300028790	Soil	MVRTSRTYRRGVLALTWLGEWRLPPPERRAARAERETERRLYLERDDTTHASWRRQERVDAERRRWAGWE
Ga0307299_103326342	3300028793	Soil	MLRTSRTYRRGTLALTWLGEWRLPPPERRAARTEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0307287_102126651	3300028796	Soil	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARTEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0247825_106300072	3300028812	Soil	ARRGRAALVWLGEWRLPAPERRAARAERATLARIRLERDNTLYTPWARAAALEAERRRWNVYGM
Ga0307312_110383152	3300028828	Soil	MLRTTRTARRGRSALTWLGELRLPGPERRAARAERATLRAMRLERDNTLHTPWARAAALEAERRRWNIYGIL
Ga0307286_103454221	3300028876	Soil	MLRTSRTYRRGTRALTWLGEWRMPPPERRAARTEREVERRLWLERDDTQHMPWRRQEALEAERR
Ga0247826_100830633	3300030336	Soil	MLRTTRTARRGRAAVTWLAEWRLPAGERRAARAERATLRMLSLERDNTKHTPWARAAALEAERRRDGGCLLLWDP
Ga0247826_114199202	3300030336	Soil	MLRTTRTARRGRAALTWLVEWRLPAPERRAARAERMALRTLSLHRDNVEHTPWARAAALEAERRRDGGCLLLWDP
Ga0307502_100853042	3300031164	Soil	MLRTTRTARRGRAALTWIGEWRLPGPERGAARAERATLRRMRLERDNTLHTPWARAAALEAERRRWNVYGM
Ga0307499_101468482	3300031184	Soil	MLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0307468_1019598242	3300031740	Hardwood Forest Soil	MLRTSRTYRRGLLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWGT
Ga0308175_1023790951	3300031938	Soil	RCPRPLAAPRKRSYARAMLRTSRTYRRGVLALTWLGEWRLPPPERRAARSEREVERRLWLERDDTQHMPWRRQEALEAERRRWAGWE
Ga0326721_104930922	3300032080	Soil	MLRTTRTARRGRAALTWLAEWRLPAPERRAARAERMALRMLSLHRDNVEHTPWARAAALEAERRRDGGCLLMWDP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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