Metagenome / Metatranscriptome Family F089955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089955
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	94 residues
Representative Sequence	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVAAYTGSNTKYEYGCFTVDGAFSAAMTN
Number of Associated Samples	80
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.19 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	57.41 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (45.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.44% β-sheet: 37.40% Coil/Unstructured: 60.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.161.1.1: ADC synthase	d1i7qa_	1i7q	0.52982
d.161.1.1: ADC synthase	d2fn1a2	2fn1	0.5287
b.1.1.0: automated matches	d2qhla_	2qhl	0.52581
d.142.2.5: m3G-cap binding domain of snurportin-1	d1xk5a_	1xk5	0.51557
d.86.1.0: automated matches	d2idra_	2idr	0.50784

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03237	Terminase_6N	3.70
PF00959	Phage_lysozyme	2.78
PF02839	CBM_5_12	1.85
PF08291	Peptidase_M15_3	0.93
PF02562	PhoH	0.93
PF11753	DUF3310	0.93
PF13884	Peptidase_S74	0.93
PF03819	MazG	0.93
PF00210	Ferritin	0.93
PF00383	dCMP_cyt_deam_1	0.93
PF11351	GTA_holin_3TM	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.93
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Viruses	superkingdom	All Organisms → Viruses	29.63 %
cellular organisms	root	All Organisms → cellular organisms	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.56 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.56 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.56 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.56 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.15 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.56 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	2.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004240\|Ga0007787_10022035	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300004240\|Ga0007787_10160247	Not Available	1084	Open in IMG/M
3300004763\|Ga0007746_1025413	Not Available	14479	Open in IMG/M
3300004763\|Ga0007746_1028679	Not Available	1222	Open in IMG/M
3300004765\|Ga0007745_1019017	Not Available	1212	Open in IMG/M
3300004767\|Ga0007750_1395541	Not Available	604	Open in IMG/M
3300004769\|Ga0007748_11661983	Not Available	2654	Open in IMG/M
3300005581\|Ga0049081_10001414	Not Available	9043	Open in IMG/M
3300005581\|Ga0049081_10008531	All Organisms → Viruses → Predicted Viral	3887	Open in IMG/M
3300005581\|Ga0049081_10197450	Not Available	722	Open in IMG/M
3300005582\|Ga0049080_10080644	All Organisms → Viruses → Predicted Viral	1113	Open in IMG/M
3300005582\|Ga0049080_10134111	Not Available	834	Open in IMG/M
3300005582\|Ga0049080_10169601	Not Available	727	Open in IMG/M
3300006920\|Ga0070748_1006198	Not Available	5316	Open in IMG/M
3300006920\|Ga0070748_1104800	Not Available	1075	Open in IMG/M
3300006920\|Ga0070748_1107757	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300007276\|Ga0070747_1046212	Not Available	1678	Open in IMG/M
3300007538\|Ga0099851_1066142	All Organisms → Viruses → Predicted Viral	1405	Open in IMG/M
3300007540\|Ga0099847_1011086	All Organisms → Viruses → Predicted Viral	2982	Open in IMG/M
3300007542\|Ga0099846_1079035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1223	Open in IMG/M
3300007546\|Ga0102874_1203249	Not Available	607	Open in IMG/M
3300007560\|Ga0102913_1051525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1343	Open in IMG/M
3300007590\|Ga0102917_1243825	Not Available	623	Open in IMG/M
3300007618\|Ga0102896_1081310	Not Available	1065	Open in IMG/M
3300007624\|Ga0102878_1210342	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	556	Open in IMG/M
3300007630\|Ga0102903_1154582	Not Available	628	Open in IMG/M
3300007708\|Ga0102859_1022327	Not Available	1659	Open in IMG/M
3300007708\|Ga0102859_1028531	Not Available	1491	Open in IMG/M
3300008950\|Ga0102891_1169418	Not Available	642	Open in IMG/M
3300009154\|Ga0114963_10040071	All Organisms → Viruses → Predicted Viral	3045	Open in IMG/M
3300009159\|Ga0114978_10032094	All Organisms → Viruses → Predicted Viral	3743	Open in IMG/M
3300009159\|Ga0114978_10304172	Not Available	975	Open in IMG/M
3300009161\|Ga0114966_10003774	Not Available	13166	Open in IMG/M
3300009161\|Ga0114966_10315116	Not Available	941	Open in IMG/M
3300009165\|Ga0105102_10190919	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300009169\|Ga0105097_10647497	Not Available	596	Open in IMG/M
3300009170\|Ga0105096_10032315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	2567	Open in IMG/M
3300009180\|Ga0114979_10000434	Not Available	27780	Open in IMG/M
3300009181\|Ga0114969_10318454	Not Available	912	Open in IMG/M
3300009182\|Ga0114959_10496390	Not Available	589	Open in IMG/M
3300009184\|Ga0114976_10063883	Not Available	2146	Open in IMG/M
3300009185\|Ga0114971_10158557	Not Available	1359	Open in IMG/M
3300009684\|Ga0114958_10009980	Not Available	5965	Open in IMG/M
3300010157\|Ga0114964_10135517	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300010157\|Ga0114964_10209044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	936	Open in IMG/M
3300010160\|Ga0114967_10178032	All Organisms → Viruses → Predicted Viral	1160	Open in IMG/M
3300010316\|Ga0136655_1142664	Not Available	716	Open in IMG/M
3300010334\|Ga0136644_10072533	All Organisms → Viruses → Predicted Viral	2175	Open in IMG/M
3300010354\|Ga0129333_10016232	Not Available	7079	Open in IMG/M
3300010885\|Ga0133913_10106747	Not Available	7502	Open in IMG/M
3300010885\|Ga0133913_10166994	Not Available	5880	Open in IMG/M
3300010885\|Ga0133913_10752679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	2544	Open in IMG/M
3300013295\|Ga0170791_12489273	Not Available	572	Open in IMG/M
3300014204\|Ga0172381_10833014	Not Available	690	Open in IMG/M
3300021438\|Ga0213920_1000239	Not Available	50669	Open in IMG/M
3300021956\|Ga0213922_1077979	Not Available	692	Open in IMG/M
3300021961\|Ga0222714_10568489	Not Available	571	Open in IMG/M
3300021962\|Ga0222713_10002675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18868	Open in IMG/M
3300021963\|Ga0222712_10168927	All Organisms → Viruses → Predicted Viral	1459	Open in IMG/M
3300021963\|Ga0222712_10417925	Not Available	811	Open in IMG/M
3300021963\|Ga0222712_10418478	Not Available	810	Open in IMG/M
3300022166\|Ga0213932_1015572	Not Available	1121	Open in IMG/M
3300023184\|Ga0214919_10312525	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300023703\|Ga0228708_1001845	All Organisms → Viruses → Predicted Viral	3070	Open in IMG/M
3300024343\|Ga0244777_10576928	Not Available	684	Open in IMG/M
3300024348\|Ga0244776_10001731	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22804	Open in IMG/M
3300024348\|Ga0244776_10609039	Not Available	688	Open in IMG/M
3300024352\|Ga0255142_1029708	Not Available	863	Open in IMG/M
3300024481\|Ga0256330_1003561	All Organisms → Viruses → Predicted Viral	2896	Open in IMG/M
3300024561\|Ga0255288_1004834	All Organisms → Viruses → Predicted Viral	2748	Open in IMG/M
3300025543\|Ga0208303_1049716	All Organisms → Viruses → Predicted Viral	1023	Open in IMG/M
3300025645\|Ga0208643_1000514	Not Available	25526	Open in IMG/M
3300025645\|Ga0208643_1172526	Not Available	531	Open in IMG/M
3300025652\|Ga0208134_1025295	Not Available	2157	Open in IMG/M
3300025655\|Ga0208795_1109710	Not Available	729	Open in IMG/M
3300025655\|Ga0208795_1133861	Not Available	634	Open in IMG/M
3300026573\|Ga0255269_1004219	All Organisms → Viruses → Predicted Viral	3648	Open in IMG/M
3300026573\|Ga0255269_1008722	All Organisms → Viruses → Predicted Viral	2684	Open in IMG/M
3300027255\|Ga0208681_1090497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300027608\|Ga0208974_1007202	All Organisms → Viruses → Predicted Viral	3740	Open in IMG/M
3300027608\|Ga0208974_1009761	All Organisms → Viruses → Predicted Viral	3147	Open in IMG/M
3300027659\|Ga0208975_1133721	Not Available	701	Open in IMG/M
3300027712\|Ga0209499_1144723	Not Available	872	Open in IMG/M
3300027734\|Ga0209087_1333816	Not Available	529	Open in IMG/M
3300027741\|Ga0209085_1000121	Not Available	58173	Open in IMG/M
3300027749\|Ga0209084_1091601	Not Available	1356	Open in IMG/M
3300027763\|Ga0209088_10000103	Not Available	61447	Open in IMG/M
3300027770\|Ga0209086_10000909	Not Available	24370	Open in IMG/M
3300027777\|Ga0209829_10032361	All Organisms → Viruses → Predicted Viral	2932	Open in IMG/M
3300027782\|Ga0209500_10014955	Not Available	4650	Open in IMG/M
3300028025\|Ga0247723_1000059	Not Available	63339	Open in IMG/M
3300028025\|Ga0247723_1000113	Not Available	50155	Open in IMG/M
3300028025\|Ga0247723_1001043	Not Available	16853	Open in IMG/M
3300028025\|Ga0247723_1001303	Not Available	14830	Open in IMG/M
3300028025\|Ga0247723_1004546	Not Available	6502	Open in IMG/M
3300028025\|Ga0247723_1015067	Not Available	2787	Open in IMG/M
3300028025\|Ga0247723_1092087	Not Available	778	Open in IMG/M
3300028025\|Ga0247723_1117251	Not Available	654	Open in IMG/M
3300028286\|Ga0256331_1004219	All Organisms → Viruses → Predicted Viral	2794	Open in IMG/M
3300028392\|Ga0304729_1072953	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300033995\|Ga0335003_0253245	Not Available	814	Open in IMG/M
3300034018\|Ga0334985_0534074	Not Available	668	Open in IMG/M
3300034064\|Ga0335001_0014438	All Organisms → Viruses → Predicted Viral	4670	Open in IMG/M
3300034068\|Ga0334990_0000601	Not Available	21862	Open in IMG/M
3300034082\|Ga0335020_0007874	All Organisms → Viruses	6587	Open in IMG/M
3300034104\|Ga0335031_0796459	Not Available	530	Open in IMG/M
3300034106\|Ga0335036_0518535	Not Available	739	Open in IMG/M
3300034283\|Ga0335007_0412607	Not Available	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.67%
Terrestrial	Environmental → Terrestrial	7.41%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	61.11%
Marine	Environmental → Aquatic → Marine	30.56%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.41%
Landfill	Engineered → Solid Waste → Landfill	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	34.26%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.81%
Coastal	Environmental → Aquatic → Marine → Coastal	13.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.04%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.41%
River	Environmental → Aquatic → Freshwater → River	5.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.63%
Creek	Environmental → Aquatic → Freshwater → Creek	3.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	34.26%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.04%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	25.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.04%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.04%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	8.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.33%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	7.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	5.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	3.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.78%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004765	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004767	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022166	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300023703	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024352	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024561	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300026573	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027255	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028286	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007787_100220352	3300004240	Freshwater Lake	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGADTTAGAIVVAAVTAFNGSNTKYEYGCFTIDGAFSAAMTN*
Ga0007787_101602472	3300004240	Freshwater Lake	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSDYAAPKVIRGKITQVKYYDGANGTAGALVVASTPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0007746_102541310	3300004763	Freshwater Lake	MEFLRITAVDGTRQYIPDNHVVNVATTADGADAGSDYRAPNVTRGRISQVKYYDGSNGTSGALVVTAVSAYVTGGILYEYGCLTNDGAYSVYLRN*
Ga0007746_10286792	3300004763	Freshwater Lake	MEFLRITATDGTRQYIPDNHVVNIATSADTFDAGSDYAAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0007745_10190171	3300004765	Freshwater Lake	MEFLRITATDGTRQYIPDNHVVNVATSADTFDAGSNYAAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0007750_13955412	3300004767	Freshwater Lake	TRQYIPDNYVVNVAASADTVDAGSDYRAPNVIRGKITGVKYYDGANATAGALVVVTGIPAYAAGGTLYSYGCFTVDGSFSAALSN*
Ga0007748_116619831	3300004769	Freshwater Lake	MEFLRITAPDGTRQYIPDNYVVNVAASADTVDAGSDYRAPNVIRGKITGVKYYDGANATAGALVVVTGIPAYAAGGTLYSYGCFTVDGSFSAALSN*
Ga0049081_100014147	3300005581	Freshwater Lentic	MEFLRITATDGTRQYIPDNYVVNIATTADALDAGSNYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTIDGGFSAALKN*
Ga0049081_100085316	3300005581	Freshwater Lentic	MDFLRITATDGTRQYIPSEYVVNIATTTDGLDAGSNYSAPKVTRGRISQIKYYDGANATAGALVVTAVSAYVAGGILYEYGCLTNDGAFSTYLRN*
Ga0049081_101974502	3300005581	Freshwater Lentic	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSDYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0049080_100806443	3300005582	Freshwater Lentic	MEFLRITAADGTRQYIPDNHVINVATTADSADAGSNYRAPNVTRGRISQVKYYDGANATAGAIVVTSVSAYTSGGILYEYGCLTNDGAYSVYLRN*
Ga0049080_101341112	3300005582	Freshwater Lentic	MEFLRITATDGTRQYIPDNHVVNVATSADTFDAGSDYAAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0049080_101696013	3300005582	Freshwater Lentic	TNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGADTTAGAIVVAAVTAFNGSNTKYEYGCFTIDGAFSAAMTN*
Ga0070748_10061981	3300006920	Aqueous	MLKITATDGTQKYVPDNYVVSINTAADTLDAGSAYAAPKVIRGRITGVTYYDGANATAGALVVVVVPAKGAGVVTYEYGCKTIDGAFSVAMSN*
Ga0070748_11048003	3300006920	Aqueous	MEFLKITATDGTQNYIPDNYVVSVKTAADTLDAGSDYSAPKVIRGRITEVIYYNGANATAGALVVVTVPAKGAGVSTYEYGCKTIDGAFSVAMSN*
Ga0070748_11077571	3300006920	Aqueous	MEMLKITATDGTQKYVPDNYVVSVNTAADTLDAGSDYSAPKVIRGRITGVTYYDGANATAGALVVVVVPAKGAGVATYEYGCKTIDGAFSVAMSN*
Ga0070747_10462122	3300007276	Aqueous	MEMLKITATDGTQNYIPDNYVVSVKTAADTLDAGSSYSAPKVIRGRITEVIYYNGANGTAGALVVVTVPAKGAGVATYEYGCKTIDGAFSVAMSN*
Ga0099851_10661423	3300007538	Aqueous	MEMLKITATDGTQNYIPDNYVVSVKTAADTLDAGSDYSAPKAIRGRITEVIYYNGANGTSGALVVVTVPAKGAGVATYEYGCKTVDGAFSVAMSN*
Ga0099847_10110864	3300007540	Aqueous	MGEILSLFISKGKQMEFLRITAPDGTRQYIPDNYVANIATSADTLDAGSAYRAPNVVRGRITQVKYYDGLAATAGALVVVTVPAYVAGGTLYSYGCFTVDGAFLAALSN*
Ga0099846_10790353	3300007542	Aqueous	ATDGTQNYIPDNYVVSVKTAADTLDAGSDYSAPKAIRGRITEVIYYNGANGTAGALVVVTVPAKGFGVATYEYGCKTVDGAFSVAMSN*
Ga0102874_12032491	3300007546	Estuarine	MEFLRITATDGTRQYIPENFVVNVATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGCFTVDGAFSTAMTN*
Ga0102913_10515253	3300007560	Estuarine	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSNYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTVDGAFSTAMTN*
Ga0102917_12438252	3300007590	Estuarine	MEFLRITATDGTRQYIPDNHVVNVATSTDTLDAGSDYSAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCF
Ga0102896_10813101	3300007618	Estuarine	GTQMEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGCFTVDGAFSTAMTN*
Ga0102878_12103421	3300007624	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGCFTVDGAFS
Ga0102903_11545822	3300007630	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTK
Ga0102859_10223273	3300007708	Estuarine	MEFLRITATNGIKQYIPDNYIVKMVVSADTLDAGSDYAAPKVASRGKITSVSYYDGADTTAGAIVVAAVTAYDSTNALYEFGVFGFDGTFNTALRN*
Ga0102859_10285312	3300007708	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSDYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGSNTKYEYGCFTNDGAFSNYMTN*
Ga0102891_11694182	3300008950	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGCFTVDGAFSTAMTN*
Ga0114963_100400713	3300009154	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADSADAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTVDGAFLVALKN*
Ga0114978_100320942	3300009159	Freshwater Lake	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVAAVTAFDGSNTKYEYGCFTIDGAFSAAMTN*
Ga0114978_103041721	3300009159	Freshwater Lake	IPDNYVVNIATTADGADAGSDYRAPNVTRGRISQVKYYDGANATAGALVVTSVSAYASGGILYEYGCFTVDGAFSSALRN*
Ga0114966_100037746	3300009161	Freshwater Lake	MEFLRITATNGIKQYIPDNYVVKIVVSADTLDAGSDYAAPKVASRGKITSVSYYDGADTTAGAIVVATVAAYDSTNALYEFGVFGFDGTFNTALRN*
Ga0114966_103151162	3300009161	Freshwater Lake	MEFLRITATNGTRTYIPDNYVVKVVASADTLDAGSDYRAPNVVRGIITSVSYYDGANATAGAIVVAAVTAYNGANTLYEYGCFTVDGAFSTALRN*
Ga0105102_101909193	3300009165	Freshwater Sediment	FISKGTQMEFLRITATNGTRTYIPDNYVVNISTSADTLDAGSDYRAPNVIRGKITQVKYYDGADTTVGAIVVATAAAFNGSNTKYEYGCFTIDGAFSAAMTN*
Ga0105097_106474971	3300009169	Freshwater Sediment	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSAYRAPNVIRGKITQVKYYDGADTTAGAIVVAAVTAFDGSNTKYEYGCFTIDGAFSAAMTN*
Ga0105096_100323154	3300009170	Freshwater Sediment	MEFLRITATNGTRTYIPDNYVVNISTSADTLDAGSDYRAPNVIRGKITQVKYYDGADTTVGAIVVATAAAFNGSNTKYEYGCFTIDGAFSAAMTN*
Ga0114979_1000043419	3300009180	Freshwater Lake	MEFLRITATDGTRQYIPDNHVLNVATSTDTVDAGSNYSAPKVIRGKITQVKYFDGANATAGAIVVASTPAFTGANTKYEYGCFTNDGAFSNYMTN*
Ga0114969_103184542	3300009181	Freshwater Lake	MEFLRITATNGIKQYIPDNYVVKIVVSADTLDAGSDYAAPKVASRGKITSVSYYDGADTTAGAIVVATVAAYNSTNALYEFGVFGFDGTFNTALRN*
Ga0114959_104963901	3300009182	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADSTDAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTVDGAFLVALKN*
Ga0114976_100638831	3300009184	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQIKYYDGANATAGALVVTAVSAYAAGGILYEYGCFTIDGAFSTALRN*
Ga0114971_101585573	3300009185	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVAAYTGSNTKYEYGCFTVDGAFSAAMTN*
Ga0114958_100099807	3300009684	Freshwater Lake	MEFLRITATDGTKQYIPDNYVVKVVVSADTLDAGSDYAAPKVTSRGKITSVSYYDGANGTAGALVVATVAAYTGGNALYEYGAFSFD
Ga0114964_101355171	3300010157	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVKVVTAADTLDAGSNYSAPKVIRGKITSVTYYDGANTTAGALVVATVAAYTGSNTQYQYGCYTIDGAFSAAMSN*
Ga0114964_102090441	3300010157	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSNYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTIDGGFSAALKN*
Ga0114967_101780322	3300010160	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNVATSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGALVVAATPAFTGANTKYEYGCFTVDGSFSTAMTN*
Ga0136655_11426641	3300010316	Freshwater To Marine Saline Gradient	VPDNYVVSINTAADTLDAGSDYSAPKVIRGRITGVTYYDGANATAGALVVVTVPAKGAGVATYEYGCKTIDGAFSVAMSN*
Ga0136644_100725333	3300010334	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTVDGAFLVALKN*
Ga0129333_100162323	3300010354	Freshwater To Marine Saline Gradient	MEFLRITATNGTRTYIPDNYVAQITTTADTLDAGSSYRAPDVVRGRINGVKYYDGANGTAGALVVVSGISAYVTGGVLYEYGFFTVDGAFVAALRN*
Ga0133913_101067474	3300010885	Freshwater Lake	MEFLRITATNGIKQYIPDNYVVKIVVSADTLDAGSDYAAPKVASRGKITSVSYYDGANTTAGAIVVATVAAYDSTNALYEFGVFGFDGTFNTALRN*
Ga0133913_101669943	3300010885	Freshwater Lake	MEFLRITATNGTRTYIPDNYVVKVVASADTLDAGSDYRAPNVVRGIITSVSYYDGANATAGAIVVAAVTAYNGANTLYEYGCFTVAGAFSTALRN*
Ga0133913_107526793	3300010885	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGALVVASTPAFTGANAKYEYGCFTVDGSFSAAMTN*
Ga0170791_124892732	3300013295	Freshwater	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQVKYYDGANATAGALVVTSVSAYASGGILYEYGCFTVDGAFSSALRN*
Ga0172381_108330142	3300014204	Landfill Leachate	MEFLRITAADGTRKYIPDNYVMQISVSAEAKDTGSGYRAPNVVRGKITEVKYYDGANATAGAIVVTAVIPWVTGGIKYEYGCHTFDGAFSVVITN*
Ga0213920_100023920	3300021438	Freshwater	MEFLRITATDGTKQYIPDNYVVKITTAADTQDAGSNYSAPKVIRGRITGVTYYDGANATAGALVVTAVGAYDGTNARYQYGCFTVDGAFVATMSN
Ga0213922_10779792	3300021956	Freshwater	QLKGRGEILSLFISKGKQMEFLRITATDGTKQYIPDNYVVKITTAADTQDAGSNYSAPKVIRGRITGVTYYDGANATAGALVVTAVGAYDGTNARYQYGCFTVDGAFVATMSN
Ga0222714_105684892	3300021961	Estuarine Water	YIPDNYVVNIATTADSLDAGSDYRAPNVVRGRISQVKYYDGANSTAGALVVTAVSAYASGGILYEYGCFTVDGSFSAALKN
Ga0222713_1000267520	3300021962	Estuarine Water	MEFLRITATDGTRQYIPDNYVVNIATTADSLDAGSDYRAPNVVRGRISQVKYYDGANSTAGALVVTAVSAYASGGILYEYGCFTVDGSFSAALKN
Ga0222712_101689271	3300021963	Estuarine Water	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGADTTAGAIVVAAVTAFNGSNTKY
Ga0222712_104179251	3300021963	Estuarine Water	QYIPDNYVVNIATTADGADAGSNYSAPKVSRGRISQVKYYDGANATAGALVVTTVSAYAAGGILYEYGCFTIDGAFSVALKN
Ga0222712_104184781	3300021963	Estuarine Water	MEFLRITATNGTRQYIPDNHVVNVATSADTLDAGSDYAAPKVIRGKITQVKYYDGANGEAGALVVASTPAFTGSNTKYEYGCFTNDGAFSNYMTN
Ga0213932_10155721	3300022166	Freshwater	MEFLRITATDGTRKYIPDNYVAQISTAADTQDAGSNYSAPKVIRGKITGAKYYDGLVSTAGALVVDTVAAYDGTNARYQYGCFTVDGAFIATMSN
Ga0214919_103125252	3300023184	Freshwater	MEFLRITATDGTRQYIPDNYVVNIATTADGTDAGSGYRAPNVTRGRISQIKYYDGANATAGALVVTAVSAYAAGGILYEYGCFTIDGAFSSALR
Ga0228708_10018451	3300023703	Freshwater	MEFLRITAADGTRQYIPDNYVVNIATTADTQDAGSNYSAPKVVRGRISQVKYYDGAVSTAGALVVTAVSEYTTGGILYEYGCFTIDGAFSAALKN
Ga0244777_105769282	3300024343	Estuarine	MEFLRITATDGTRQYIPENFVVNVATSADTLDAGSDYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0244776_1000173121	3300024348	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGCFTVDGAFSTAMTN
Ga0244776_106090392	3300024348	Estuarine	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSNYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0255142_10297082	3300024352	Freshwater	MEFLRITAADGTRQYIPDNYVVNIATTADGLDAGSDYRAPNVTRGRISQVKYYDGANATAGALVVTAVSAYAAGGILYEYGCFTIDGAFSTALRN
Ga0256330_10035614	3300024481	Freshwater	MEFLRITATDGTKKYIPDNYVVSITTSADTLDGGSDYRAPNVVRGRITNVKYYDGANTTPGAIVDASVAAYTGANELYEYGCFTVDGAFIAALKN
Ga0255288_10048344	3300024561	Freshwater	MEFLRITATDGTKKYIPDNYVVSITTSADTLDGGSDYRAPNVVRGSITNVKYYDGANTTPGAIVDASVAAYTGANELYEYGCFTVDGAFIAALKN
Ga0208303_10497162	3300025543	Aqueous	MGEILSLFISKGKQMEFLRITAPDGTRQYIPDNYVANIATSADTLDAGSAYRAPNVVRGRITQVKYYDGLAATAGALVVVTVPAYVAGGTLYSYGCFTVDGAFLAALSN
Ga0208643_100051451	3300025645	Aqueous	MEMLKITATDGTQKYVPDNYVVSVNTAADTLDAGSDYSAPKVIRGRITGVTYYDGANATAGALVVVVVPAKGAGVATYEYGCKTIDGAFSVAMSN
Ga0208643_11725262	3300025645	Aqueous	MEFLKITATDGTQNYIPDNYVVSVKTAADTLDAGSDYSAPKVIRGRITEVIYYNGANATAGALVVVTVPAKGAGVSTYEYGCKTIDGAFSVAMSN
Ga0208134_10252952	3300025652	Aqueous	MEMLKITATDGTQNYIPDNYVVSVKTAADTLDAGSSYSAPKVIRGRITEVIYYNGANGTAGALVVVTVPAKGAGVATYEYGCKTIDGAFSVAMSN
Ga0208795_11097101	3300025655	Aqueous	GTQNYIPDNYVVSVKTAADTLDAGSDYSAPKVIRGRITEVIYYNGANATAGALVVVTVPAKGAGVSTYEYGCKTIDGAFSVAMSN
Ga0208795_11338611	3300025655	Aqueous	MEMLKITATDGTQNYIPDNYVVSVKTAADTLDAGSDYSAPKVIRGRITEVIYYNGANGTSGALVVVTVPAKGAGVATYEYGCKTVDGAFSVAMSN
Ga0255269_10042196	3300026573	Freshwater	MEFLRITATDGTKKYIPDNYVVSITTSADTLDGGSDYRAPNVVRGRITNVKYYDGANTTPGAIVDASVAAYTGANELYEYGCFTVDGAFI
Ga0255269_10087223	3300026573	Freshwater	MEFLRITATDGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVAAYTGSNTKYE
Ga0208681_10904972	3300027255	Estuarine	MEFLRITATDGTRQYIPDNYVVNIATSADTLDAGSNYRAPNVIRGKMTQVKYYDGANATAGALVVAATPAFTGANTKYEYGC
Ga0208974_10072026	3300027608	Freshwater Lentic	MDFLRITATDGTRQYIPSEYVVNIATTTDGLDAGSNYSAPKVTRGRISQIKYYDGANATAGALVVTAVSAYVAGGILYEYGCLTNDGAFSTYLRN
Ga0208974_10097614	3300027608	Freshwater Lentic	MEFLRITATDGTRQYIPDNYVVNIATTADALDAGSNYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTIDGGFSAALKN
Ga0208975_11337211	3300027659	Freshwater Lentic	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSDYRAPNVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0209499_11447232	3300027712	Freshwater Lake	MEFLRITATDGTKQYIPDNYVVKVVVSADTLDAGSDYAAPKVTSRGKITSVSYYDGANGTAGALVVATVAAYTGGNALYEYGAFSFDGAFSAAMRN
Ga0209087_13338162	3300027734	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQIKYYDGANATAGALVVTAVSAYAAGGILYEYGCFTIDGAFSTALRN
Ga0209085_100012162	3300027741	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADSADAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTVDGAFLVALKN
Ga0209084_10916012	3300027749	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTVDGAFLVALKN
Ga0209088_1000010365	3300027763	Freshwater Lake	MEFLRITATDGTRQYIPDNHVLNVATSTDTVDAGSNYSAPKVIRGKITQVKYFDGANATAGAIVVASTPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0209086_1000090929	3300027770	Freshwater Lake	MEFLRITATNGIKQYIPDNYVVKIVVSADTLDAGSDYAAPKVASRGKITSVSYYDGANTTAGAIVVATVAAYDSTNALYEFGVFGFDGTFNTALRN
Ga0209829_100323611	3300027777	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSNYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYAAGGILYEYGCFTIDGGFSAALKN
Ga0209500_100149552	3300027782	Freshwater Lake	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVAAVTAFDGSNTKYEYGCFTIDGAFSAAMTN
Ga0247723_100005993	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRQYIPDNYVANIATTADGTDAGSAYRAPNVTRGRISQVKYYDGANGTAGALVVTAVSAYASGGILYEYGCFTIDGAFSVALRN
Ga0247723_100011312	3300028025	Deep Subsurface Sediment	MEFLRITAVDGTRQYIPDNHVVNVATTADGADAGSDYRAPNVTRGRISQVKYYDGANGTAGALVVTAVSAYTSGGILYEYGCLTNDGAYSVYLRN
Ga0247723_100104311	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRQYIPDNYVVNIATTADGVDGGSNYRAPNVTRGRISQVKYYDGANSTAGALVVTAVSAYASGGILYEYGCFSMDGAFSAALRN
Ga0247723_100130314	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRQYIPDNYVVNIATTADSLDAGSDYRAPNVVRGRISQVKYYDGANSTAGALVVTSVSAYASGGILYEYGCFTVDGSFSAALKN
Ga0247723_10045465	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRQYIPDNYVVNIATTADGADAGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTSVSAYASGGILYEYGCFTVDGAFLAALKN
Ga0247723_10150671	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSDYAAPKVIRGKITQVKYYDGANGTPGALVVASTPAFTGSNTKYEYGCFTNDGAFSNYMTN
Ga0247723_10920872	3300028025	Deep Subsurface Sediment	MEFLRITAANGTRQYIPDNYVVNISTTAETLDAGSNYSAPKVIRGIINQVKYYDGANATAGALVVTSVSPYAAGGILYEYGCFTVDGAFIDALSN
Ga0247723_11172512	3300028025	Deep Subsurface Sediment	MEFLRITATDGTRTYIPDNYVVNFSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVAAFNGSNTKYEYGCFTVDGAFSAAVTN
Ga0256331_10042191	3300028286	Freshwater	MEFLRITATDGTKKYIPDNYVVSITTSADTLDGGSDYRAPNVVRGRITNVKYYDGANTTPGAIVDASVAAYTGANELYEYGCFTVDGAFIA
Ga0304729_10729531	3300028392	Freshwater Lake	MEFLRITATDGTRQYIPDNYVVKVVTAADTLDAGSNYSAPKVIRGKITSVTYYDGANTTAGALVVATVAAYTGSNTQYQYGCYTIDGAFSAAMSN
Ga0335003_0253245_473_760	3300033995	Freshwater	MEFLRITATDGTRQYIPDNYVANIATTADSLDSGSDYRAPNVTRGRISQVKYYDGANTTAGALVVTAVSAYTTGGILYEYGCFTIDGAFSVALRN
Ga0334985_0534074_206_493	3300034018	Freshwater	MEFLRITATDGTRQYIPDNHVVNVATSADTFDAGSDYAAPKVIRGKITQVKYYDGANGTAGALVVASTPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0335001_0014438_1022_1309	3300034064	Freshwater	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVTAFDGSNTKYEYGCFTIDGAFSAAMTN
Ga0334990_0000601_14685_14972	3300034068	Freshwater	MEFLRITATDGTRQYIPDNHVVNVATSADTFDAGSDYAAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN
Ga0335020_0007874_3903_4190	3300034082	Freshwater	MEFLRITATDGTRQYIPDNHVVNVATSADTLDAGSNYSAPKVIRGKITQVKYYDGANATAGAIVVAATPAFTGSNTKYEYGCFTNDGAFSNYMTN
Ga0335031_0796459_276_530	3300034104	Freshwater	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVATVTAFDGSNTKYEYGCFTI
Ga0335036_0518535_423_710	3300034106	Freshwater	MEFLRITATNGTRTYIPDNYVVNVSTSADTLDAGSDYRAPNVIRGKITQVKYYDGANTTAGAIVVASVTAFDGSNTKYEYGCFTIDGAFSAAMTN
Ga0335007_0412607_208_495	3300034283	Freshwater	MEFLRITATDGTRQYIPDNHVVNVATSADTFDAGSDYAAPKVIRGKITQVKYYDGANGTAGALVVAATPAFTGANTKYEYGCFTNDGAFSNYMTN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089955

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences