NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F089929

Metagenome / Metatranscriptome Family F089929

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089929
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 86 residues
Representative Sequence MCSLWTAVVTTMLQRLKLLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDAPGQEPSAPEAPDHTAQTSRHRPRRSS
Number of Associated Samples 91
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 37.04 %
% of genes near scaffold ends (potentially truncated) 18.52 %
% of genes from short scaffolds (< 2000 bps) 78.70 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.926 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(38.889 % of family members)
Environment Ontology (ENVO) Unclassified
(45.370 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.70%    β-sheet: 0.00%    Coil/Unstructured: 56.30%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF03050DDE_Tnp_IS66 15.74
PF05717TnpB_IS66 4.63
PF00239Resolvase 2.78
PF04465DUF499 0.93
PF00109ketoacyl-synt 0.93
PF03743TrbI 0.93
PF01555N6_N4_Mtase 0.93
PF13546DDE_5 0.93
PF05368NmrA 0.93
PF02954HTH_8 0.93
PF04186FxsA 0.93
PF14706Tnp_DNA_bind 0.93
PF00589Phage_integrase 0.93
PF00005ABC_tran 0.93
PF01610DDE_Tnp_ISL3 0.93
PF08352oligo_HPY 0.93
PF13649Methyltransf_25 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG3436TransposaseMobilome: prophages, transposons [X] 20.37
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 2.78
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 2.78
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.93
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.93
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.93
COG2948Type IV secretory pathway, VirB10 componentIntracellular trafficking, secretion, and vesicular transport [U] 0.93
COG3030FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 familyGeneral function prediction only [R] 0.93
COG3464TransposaseMobilome: prophages, transposons [X] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A50.93 %
All OrganismsrootAll Organisms49.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_10942854Not Available509Open in IMG/M
3300000559|F14TC_100334510Not Available557Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10062083All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300000754|JGI11851J11668_1002861Not Available711Open in IMG/M
3300000890|JGI11643J12802_11178302Not Available681Open in IMG/M
3300000955|JGI1027J12803_101129971Not Available540Open in IMG/M
3300000956|JGI10216J12902_113975078All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1422Open in IMG/M
3300001661|JGI12053J15887_10431901Not Available631Open in IMG/M
3300004267|Ga0066396_10037122Not Available735Open in IMG/M
3300004281|Ga0066397_10010175All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300004633|Ga0066395_10108468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae1350Open in IMG/M
3300005179|Ga0066684_10747923Not Available651Open in IMG/M
3300005289|Ga0065704_10082646All Organisms → cellular organisms → Bacteria3568Open in IMG/M
3300005294|Ga0065705_10016039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2671Open in IMG/M
3300005294|Ga0065705_10734111Not Available637Open in IMG/M
3300005295|Ga0065707_10106247All Organisms → cellular organisms → Bacteria → Proteobacteria2605Open in IMG/M
3300005332|Ga0066388_100059662All Organisms → cellular organisms → Bacteria → Proteobacteria4026Open in IMG/M
3300005332|Ga0066388_106121886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44205607Open in IMG/M
3300005332|Ga0066388_107673969Not Available541Open in IMG/M
3300005445|Ga0070708_100135494All Organisms → cellular organisms → Bacteria2281Open in IMG/M
3300005552|Ga0066701_10080708All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300005552|Ga0066701_10654731Not Available635Open in IMG/M
3300005557|Ga0066704_10827004Not Available575Open in IMG/M
3300005713|Ga0066905_101760600All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300005764|Ga0066903_102096322All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300005764|Ga0066903_105161787Not Available691Open in IMG/M
3300005985|Ga0081539_10013897All Organisms → cellular organisms → Bacteria6016Open in IMG/M
3300006049|Ga0075417_10010738All Organisms → cellular organisms → Bacteria → Proteobacteria3387Open in IMG/M
3300007255|Ga0099791_10010422All Organisms → cellular organisms → Bacteria3880Open in IMG/M
3300007265|Ga0099794_10012958All Organisms → cellular organisms → Bacteria3617Open in IMG/M
3300009038|Ga0099829_10199617Not Available1618Open in IMG/M
3300009038|Ga0099829_11240389Not Available617Open in IMG/M
3300009090|Ga0099827_10036504All Organisms → cellular organisms → Bacteria3600Open in IMG/M
3300009090|Ga0099827_10063178Not Available2833Open in IMG/M
3300009100|Ga0075418_12427939Not Available572Open in IMG/M
3300009143|Ga0099792_10631364Not Available686Open in IMG/M
3300009143|Ga0099792_11272479Not Available501Open in IMG/M
3300009147|Ga0114129_10384570All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300009444|Ga0114945_10757608Not Available594Open in IMG/M
3300009691|Ga0114944_1439548All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300009797|Ga0105080_1021705All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin133672Open in IMG/M
3300009799|Ga0105075_1003546Not Available1223Open in IMG/M
3300009810|Ga0105088_1022151All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300009816|Ga0105076_1024985All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1044Open in IMG/M
3300009820|Ga0105085_1127711Not Available514Open in IMG/M
3300010047|Ga0126382_10344584All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300010335|Ga0134063_10419772Not Available659Open in IMG/M
3300010359|Ga0126376_10083108All Organisms → cellular organisms → Bacteria2387Open in IMG/M
3300010360|Ga0126372_10764196Not Available952Open in IMG/M
3300010362|Ga0126377_10065286All Organisms → cellular organisms → Bacteria3219Open in IMG/M
3300010362|Ga0126377_12271375Not Available619Open in IMG/M
3300010366|Ga0126379_12501403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria615Open in IMG/M
3300011439|Ga0137432_1146698Not Available757Open in IMG/M
3300012199|Ga0137383_10490279All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300012199|Ga0137383_10627699Not Available786Open in IMG/M
3300012201|Ga0137365_10395408Not Available1020Open in IMG/M
3300012205|Ga0137362_10056677All Organisms → cellular organisms → Bacteria3211Open in IMG/M
3300012206|Ga0137380_10052674All Organisms → cellular organisms → Bacteria → Proteobacteria3732Open in IMG/M
3300012206|Ga0137380_10617075All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012210|Ga0137378_11438707Not Available602Open in IMG/M
3300012211|Ga0137377_10426164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1265Open in IMG/M
3300012211|Ga0137377_10908614All Organisms → cellular organisms → Bacteria → Terrabacteria group812Open in IMG/M
3300012349|Ga0137387_10134033All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1754Open in IMG/M
3300012349|Ga0137387_11115069Not Available561Open in IMG/M
3300012351|Ga0137386_10597845Not Available794Open in IMG/M
3300012357|Ga0137384_11480022Not Available528Open in IMG/M
3300012359|Ga0137385_10162839All Organisms → cellular organisms → Bacteria1959Open in IMG/M
3300012361|Ga0137360_10051747All Organisms → cellular organisms → Bacteria2961Open in IMG/M
3300012362|Ga0137361_11784200Not Available534Open in IMG/M
3300012362|Ga0137361_11887731Not Available514Open in IMG/M
3300012363|Ga0137390_11419288Not Available638Open in IMG/M
3300012582|Ga0137358_10650964Not Available705Open in IMG/M
3300012685|Ga0137397_10949425Not Available636Open in IMG/M
3300012917|Ga0137395_11080648Not Available570Open in IMG/M
3300012922|Ga0137394_10424164All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300012923|Ga0137359_10857591Not Available785Open in IMG/M
3300012927|Ga0137416_10939352Not Available770Open in IMG/M
3300012944|Ga0137410_10839220All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300012948|Ga0126375_10035700All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2519Open in IMG/M
3300013306|Ga0163162_12096205Not Available649Open in IMG/M
3300015241|Ga0137418_10043265All Organisms → cellular organisms → Bacteria → Proteobacteria4148Open in IMG/M
3300018079|Ga0184627_10102319All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300018433|Ga0066667_10162542All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1592Open in IMG/M
3300019360|Ga0187894_10363431Not Available652Open in IMG/M
3300019458|Ga0187892_10164165All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300021086|Ga0179596_10096934All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1333Open in IMG/M
3300021086|Ga0179596_10696463Not Available514Open in IMG/M
3300022563|Ga0212128_10033059All Organisms → cellular organisms → Bacteria3330Open in IMG/M
3300025149|Ga0209827_10139182Not Available535Open in IMG/M
3300027490|Ga0209899_1001996All Organisms → cellular organisms → Bacteria4610Open in IMG/M
3300027616|Ga0209106_1081117Not Available727Open in IMG/M
3300027646|Ga0209466_1028549All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella1147Open in IMG/M
3300027655|Ga0209388_1006418All Organisms → cellular organisms → Bacteria3050Open in IMG/M
3300027873|Ga0209814_10011840All Organisms → cellular organisms → Bacteria → Proteobacteria3439Open in IMG/M
3300027880|Ga0209481_10190658All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300027882|Ga0209590_10594428Not Available712Open in IMG/M
3300027882|Ga0209590_10983717Not Available527Open in IMG/M
3300027903|Ga0209488_10513120Not Available877Open in IMG/M
3300027949|Ga0209860_1036040Not Available658Open in IMG/M
3300027954|Ga0209859_1005631All Organisms → cellular organisms → Bacteria2676Open in IMG/M
3300027957|Ga0209857_1088069All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300028536|Ga0137415_10244599All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1604Open in IMG/M
3300028536|Ga0137415_10906233Not Available692Open in IMG/M
3300028792|Ga0307504_10050971Not Available1181Open in IMG/M
3300028878|Ga0307278_10346547Not Available655Open in IMG/M
3300031092|Ga0308204_10331475Not Available518Open in IMG/M
3300031947|Ga0310909_11394809Not Available561Open in IMG/M
3300032180|Ga0307471_102821029Not Available617Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil38.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.26%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand8.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.63%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.85%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.93%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000754Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TBEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009797Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20EnvironmentalOpen in IMG/M
3300009799Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025149Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)EnvironmentalOpen in IMG/M
3300027490Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027949Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027957Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1094285413300000550SoilMLQRLKLLKDFLGVYLNRQQGRAFLERVQASNLSDADRDLVTRIIRATLKLPDDPVHQPSSPEAPDHSAHASCRRDRHAS*
F14TC_10033451013300000559SoilMCSLWTAVATTMFQRLKLLKDFLGVSLNRQRGMALLERVQASNLSDADRALVTRIIRAMLKLPDASGQEPSAPEAPDHTVHTSRRRHRRSA*
AF_2010_repII_A1DRAFT_1006208313300000597Forest SoilMGSLWTVGVAMMFQRLKLLKDFLGVYLNPHQGMALLERVQASNLSDVDRDRVTRIIRTTLKLPDAPGHEPSSPDAPAPSAYASCRRDRHAS*
JGI11851J11668_100286123300000754SoilRLKLLKDFLGVYLNRQQGRAFLERVQASNLSDADRDLVTRIIRATLKLPDDPVHQPSSPEAPDHSAHASCRRDRHAS*
JGI11643J12802_1117830223300000890SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGMALLERVQASNLSDADRALVTRIIRAMLKLPDASGQEPSAPEAPDHTVHTSRRRHRRSA*
JGI1027J12803_10112997113300000955SoilMLQRLKLLKDFLGIYLNRQQGMAFLARVQASNLSDADRALVTRIIRATLKLSDAPGQEPSSPEAPDHTAHTSRRRHRHSA*
JGI10216J12902_11397507823300000956SoilMCLLWTAVATTMLQRLKLLKAFLGLYLNRQQGMAFLERVQASNLGDADRALVTRIIRATLKLPDAPGHEPSAPEAPDHRAHTSRRRHRHST*
JGI12053J15887_1043190123300001661Forest SoilCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA*
Ga0066396_1003712223300004267Tropical Forest SoilMLQRLKLFKDLLGVYLSRQQGMAFLERVQASNLSDADRALVTRIIRATLKLPDTPGQEPSAPEAPAPTAHPARRRHRHST*
Ga0066397_1001017523300004281Tropical Forest SoilMVQRLKFLKDLLGVYLNRQQGIALLERVQASNLSDADRALVTRIMRATLKLPDAPGQEPSAPEAPDHAAHTSRCRRRHSV*
Ga0066395_1010846823300004633Tropical Forest SoilMCSLWTAVATPMLQRLKLLKAFLGVYLNQHQGMALLERVQASDLSDADRALVTHIMRTTLKLPDACGQEPSAPEAPDHPMPASRRRH*
Ga0066684_1074792323300005179SoilMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSNADQALVTRIMRATLKLPDAPVQEPSSPEAPDHAAHTSRCRRRHSA*
Ga0065704_1008264613300005289Switchgrass RhizosphereMLQRLKLLKDFLGIYLNRQQGMAFLARVQASNLSDADRALVTRIIRATLKLPDAPGQEPSSPEAPDHTAHTSRRRHRHSA*
Ga0065705_1001603923300005294Switchgrass RhizosphereMCLLWTAVATTMLQRLKLLKDFLGVYLNRQQGMAFLERVQASNLSDDDRALVTRIIRATLKLPDAPGQAPCSPEAPDHSTQTSRHRPRRWS*
Ga0065705_1073411113300005294Switchgrass RhizosphereMGSLWTAVATTMFQRRKLLKDFLGVYLNRQRGMALLERVQASNLSDADRALVTRIIRAMLKLPDASGQEPSAPEAPDHTVHPSRRRHRRSA*
Ga0065707_1010624713300005295Switchgrass RhizosphereAVATTMLQRLKLLKDFLGIYLNRQQGMAFLARVQASNLSDADRALVTRIIRATLKLPDAPGQEPSSPEAPDHTAHTSRRRHRHSA*
Ga0066388_10005966223300005332Tropical Forest SoilMGLLWPAVATTMLHQLKRLTDFLGVYLNRQQGMALLERVPTSNLSDADRALVTRIIRVTLKLPEAPGPGPLAPEAPDHTAHTARRRHRHST*
Ga0066388_10612188613300005332Tropical Forest SoilMYLLWTAVATTMLQRFKRLKDFLSVYLNRQQGRAFLERIQASNLSDADRDLITHILRATLKLPDAPVQEPSSPEAPDHSAHTARHHPRRSS*
Ga0066388_10767396923300005332Tropical Forest SoilMCSLWTAVATPMLQRLKLLKAFLGVYLNQHQGMALLERVQASDLSDADRALVTHIMRTTLKLPDACGQEPSAPEAPDHPMPTSRRRH*
Ga0070708_10013549423300005445Corn, Switchgrass And Miscanthus RhizosphereMCLLWTAVATTMLQRLKLLKAFLGLYLNRRQGMALLERVHASDLRDEDRDLVSHIIRATLKLPDDPVPEPSAPAAPDHAAHVSRRRQ*
Ga0066701_1008070823300005552SoilMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSDADRAFVTRIMRATLKLPEAPGQEPSSPEAPDHAAHTSRCRCRHSA*
Ga0066701_1065473113300005552SoilMLQRLKLLKAFLGISLNRRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPAHAAPISRRRQRPWS*
Ga0066704_1082700413300005557SoilAVATTMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSDADRAFVTRIMRATLKLPEAPGQEPSSPEAPDHAAHTSRCRRRHLA*
Ga0066905_10176060023300005713Tropical Forest SoilMVQRLKFLKDLLGVYLNRQQGIALLERVQASNLSDADRALVTRIMRATLKLPDAPGQEPSAPEAPDHAAHTARCRRRHSV*
Ga0066903_10209632223300005764Tropical Forest SoilMLQRLKLLKDLLGVYLHRQQGLALLERVQASNLSDADRALVTRIMRATLKLPDAPGQEPSAPEAPDHAAHTSRCRRRHSA*
Ga0066903_10516178713300005764Tropical Forest SoilMLHRLKLLKDLLGVYRNRQQGLALLERVQASNLSEADRALVTRIMRATLKLPDAPVHEPSSPEAPDHAAHTSRCILPGTLH*
Ga0081539_1001389763300005985Tabebuia Heterophylla RhizosphereMCLLWTAVATTMLQRLKLLKALLGVYLNRQQGIALLERVQASNLSDADRALVTRIMRATLKLPDVPVHEPFSPEAPDHAAHTSRCRRRPSA*
Ga0075417_1001073853300006049Populus RhizosphereMCLLWTAVATTMLQRLKLLKDLLGVYLNRQQGLALLERVQASNLSDADRALVTRIMRVTLKLPEAPVHEPSSPEAPDHAAYTSRCRRRHSA*
Ga0099791_1001042253300007255Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLGVYLHRQQGMAFLERVHASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRP*
Ga0099794_1001295863300007265Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLGVYLHRQQGMTFLERVHASHLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRP*
Ga0099829_1019961713300009038Vadose Zone SoilMYSLWTAGVATMLQRLKLFKHLLGIYLNPRQGMALLERVQASNLSDEDRDRVTRIMRATLKLPDAPGHERSAPDAPAPSARASRRRDHHAS*
Ga0099829_1124038923300009038Vadose Zone SoilMGSLWTTVATTMVQRLKLLKDLLGIYLNRQHGLAVLERVQASNLSDADRDLVSRIMRAMLRLPADLGGHKPSAPDAPAPSAHASCRCQRHTT*
Ga0099827_1003650433300009090Vadose Zone SoilMCSLWTAVATTMFQRFKLLKDFLGVYLNRQQGMALLERVQASNLSDANRDLVTRIIRATLKLPDAPVQEPSSPEAPDHTAQTSRHRPRRSS*
Ga0099827_1006317823300009090Vadose Zone SoilMGSLWTTVATTMVQRLKRLKDLLGIYLNRQHGLAVLERVQASNLSDADRDLVSRIMRAMLRLPADLGGHKPSAPDAPAPSAHASCRCQRHTT*
Ga0075418_1242793923300009100Populus RhizosphereMCLLWTAVATTMLQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSDDDRALVTRIIRATLKLPDAPGQEPCSPEAPDHSTQTSRHRPRRWS*
Ga0099792_1063136413300009143Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA*
Ga0099792_1127247913300009143Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQQGMAFLERVHASNLSDADRDLVTRIMRATLKLPADPVHKPSSPAAPD
Ga0114129_1038457023300009147Populus RhizosphereMCLLWTVVATTMLQRLKLLKAFLGVYLNRRQGMALLERVQASNLSDADRTLVTRIMRATLKLPEARGQEPSSPEAPAPTAHTARRRHRHSA*
Ga0114945_1075760813300009444Thermal SpringsMCLLWTTVATTMFQRLKLLKDFLGVALNRRHGMALLERVQASNLRDDDRALVTRIMRATLRLPDERVHEPSAPGASAPSVPAAHRRQRDTF*
Ga0114944_143954813300009691Thermal SpringsMFQRLKLLKDFLGIYLNRRQGMAFLERIQASNLSADDRDLVSRIIRATLKLPDDRGHEPSSPDAPAPSAPASRRRHRHAS*
Ga0105080_102170513300009797Groundwater SandMFQRLKLLKDFLGIYLNQRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEASAPSAHAARCRQRDSS*
Ga0105075_100354623300009799Groundwater SandMFQRLKLLKDFLGIYLNQRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPDHSAQISRRRQRP*
Ga0105088_102215123300009810Groundwater SandMCSLWTTVAPTMFQRLKLLQDFLGVALNRRHGRALLERVQASNLRDEDRDLVTRLIRATLRLPDDRVHEPSSPEASAPSAHAARCRQRDSS*
Ga0105076_102498513300009816Groundwater SandMFQRLKLLQDFLGVALNRRHGRAFLERVQASNLRDEDRDLVTRLIRATLRLPDDRVHEPSSPEASAPSAHAARCRQRDSS*
Ga0105085_112771113300009820Groundwater SandTMFQRLKLLKDFLGIYLNQRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPDHSAQISRRRQRP*
Ga0126382_1034458423300010047Tropical Forest SoilMYLLWTAIGTTMLQRLKLLKDVVGLYLNRQKGIALLERVHASNLSDEDRARVSRIIRAMLKLPDDPGQEPSSPEASDLSAHASHHRPRRSS*
Ga0134063_1041977223300010335Grasslands SoilMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSDADRAFVTRIMRATLKLPEAPGQEPSSPEAPDHAAHTSRCRRRHS
Ga0126376_1008310813300010359Tropical Forest SoilMYLLWTAVATTILQRFKRLKDFLSVYLNRQQGRAFLERIQASNLSDADRDLITHILRATLKLPDAPVQEPSSPEAPDHSAHTARHHPRRSS*
Ga0126372_1076419613300010360Tropical Forest SoilMGLLWPAVATTMLHQLKRLTDFLGVYLNRQQGMALLERVPTSNLSDADRALVTRIMRATLKLPDAPGQEPSAPEAPDHAAHTSRCRRRHSV*
Ga0126377_1006528643300010362Tropical Forest SoilMVQWLKFLKDLLGVYLNRQQGIALLERVQASNLSDADRALVTRIMRATLKLPDAPGQEPSAPEAPDHAAHTARCRRRHSV*
Ga0126377_1227137513300010362Tropical Forest SoilMCSLWTAVTTPMLQRLKLLKALLGVYLNQHQGMALLERVQASNLSAADRALVTRIMRATLKLPDASRQEPSAPEAPDHTVHTSRRRHRRSA*
Ga0126379_1250140323300010366Tropical Forest SoilMLQWLKLLKDFLGIYLNRQQGIALLERIQASDLSADDRALVSRIMRATLKLPAPPVHEPSSPEAPDHAAQISRRRQRPWP*
Ga0137432_114669813300011439SoilMYSLWTTVATTMFQRLKLLKDLLGVYLNRQQGIALLERVQASNLSDADRDLVTRIMRATLKLPDAPGQEPSSPEAPDHTAQTSRHRPRRSS*
Ga0137383_1049027913300012199Vadose Zone SoilTMLQRLKLLKAFLGISLNRRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPAHAAPISRRRQRPWS*
Ga0137383_1062769913300012199Vadose Zone SoilMCSLWTAVVSTMLQRLKLLKDLLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDAPGQEPSAPEAPDHTAQTSRHRPRRSS*
Ga0137365_1039540823300012201Vadose Zone SoilMCSLWTAVATTMFQRLKRLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDASGHEPSSPEPPDHTAHTSRHRPRRSS*
Ga0137362_1005667753300012205Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLSVYLHRQQGMAFLERVHASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRPSS*
Ga0137380_1005267423300012206Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGIAFLERVQASNLSDADRALVTRIIRATLKLPDASGQEPSAPAAPDHTVHTSRRRHRRSA*
Ga0137380_1061707523300012206Vadose Zone SoilWTAVATTMFQRFKLLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDAPGQEPSAPEAPDHTAQTSRHRPRRSS*
Ga0137378_1143870713300012210Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGIAFLERVQASNLSDADRALVTRIIRATLKLPDASGQEPSAPEAPDHTAQTSRHRPRRSS*
Ga0137377_1042616423300012211Vadose Zone SoilMCILWIGVATTMLQRLKLLKDLLGIYLSRQQGMAFLERVQASNLSDADRALVTRIIRATLQLPDAPRPEPSAPEAPAHTAHPARRRHRHST*
Ga0137377_1090861413300012211Vadose Zone SoilMCSLWTAVVSTMLQRLKLLKDLLGVYLNRQQGMAFLERVQASNLSDADRALVTRIMRATLKLPEAPGQEPSSPEAPDHAAHTSRCRCRHSA*
Ga0137387_1013403323300012349Vadose Zone SoilMCLLWTAVATMWQQLKLLKDFLGVYLNRQQGLAFLERVQASNLSDADRALVTRLIRATLKLPDAPGQEPSSPEAPDHTAHTSRRRHRHSA*
Ga0137387_1111506913300012349Vadose Zone SoilMCSLWTAVVTTMLQRLKLLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDAPGQEPSAPEAPDHTAQTSRHRPRRSS*
Ga0137386_1059784523300012351Vadose Zone SoilATMWQQLKLLKDFLGVYLNRQQGLAFLERVQASNLSDADRALVTRLIRATLKLPDAPGQEPSSPEAPDHTAHTSRRRHRHSA*
Ga0137384_1148002213300012357Vadose Zone SoilMLQRLTLLKDFLDVYLNRQQGMAFLERVQASNWSDAVPALVTRISSATLQLPAAPGQEPSAPAAPDHTAHTSRRRHRHST*
Ga0137385_1016283923300012359Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGIAFLERGQASNLSDADRALVTRIIRATLKLPDASGQEPSAPAAPDHTVHTSRRRHRRSA*
Ga0137360_1005174753300012361Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLGVYLHRQQGMAFLERVHASHLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRP*
Ga0137361_1178420013300012362Vadose Zone SoilMCSLWTAVATTMFQRFKLLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAQISRRRQRPSS*
Ga0137361_1188773123300012362Vadose Zone SoilMCSLWTAVATTMLQRRKLLKDFLSVYLHRQQGMAFLERVHASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRPSS*
Ga0137390_1141928823300012363Vadose Zone SoilMCSLWTTVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA*
Ga0137358_1065096413300012582Vadose Zone SoilMMFQRLKLLKDFLGIYLNQRQGMAFLERIQTSDLSADDRDLVSRIMRATLKLPADPVHEPSSPEAPDQSAPISHRRQRP*
Ga0137397_1094942513300012685Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDLLGIYLNRRQGMAFLERIQASDLSEDDRALVSHIIRATLKLPADPVHEPSAPEAPDHSAQISRRRQRPWS*
Ga0137395_1108064823300012917Vadose Zone SoilGSLWTTVATAMVQRLKRLKDLLGIYLNRQHGLAVLERVQASNLSDADRDLVSRIMRAMLRLPADLGGHKPSAPDAPAPSAHASCRCQRHTT*
Ga0137394_1042416413300012922Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLGVYLHRQQGMAFLERVHASHLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRPSS*
Ga0137359_1085759133300012923Vadose Zone SoilMCSLWTAVATTMLQRRKLLKDFLSVYLHRQQGMAFLERVHASHLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRPSS*
Ga0137416_1093935223300012927Vadose Zone SoilMFQRLKLLKDFLGLYLNQRQGMAFLERIQTRDLSADDRDLVSRIMRATLKLPADPVHEPSSPEAPDQSAPISHRRQRP*
Ga0137410_1083922013300012944Vadose Zone SoilMLQRLKLLKDFLGVYLHRQQGMAFLERVHASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRPSS*
Ga0126375_1003570033300012948Tropical Forest SoilMATTMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSDADRALVTRIMRATLKLPDAPVQEPSSPEAPDHAAYTSRWRRRHSA*
Ga0163162_1209620523300013306Switchgrass RhizosphereFLVLYLNRQQGMAFLERVQASNLSDADRALVTRIMRATLQLPAAPGQEPSAPEAPDHTTHPSRRRHRRVT*
Ga0137418_1004326523300015241Vadose Zone SoilMCSLWTAVATTMFQRFKLLKDFLGVYLNRQQGMALLERVQASDLSDGDRARVSRIIRTMLKLPDDPGQEPSLPEASDLSAHASRRRQRRSS*
Ga0184627_1010231923300018079Groundwater SedimentMFQGLKLLKDFLSVYLNPHQGMALLERVQASNLSDADRDRVTRIIRATLKLPDDPGDEPSSPDAPAPSAHASRRRDRHAS
Ga0066667_1016254213300018433Grasslands SoilMLQRLKLLKDLLGVYLNRQQGIALLERVQASNLSNADQALVTRIMRATLKLPDAPVQEPSSPEAPDHAAHTSRCRRRHSA
Ga0187894_1036343113300019360Microbial Mat On RocksLGVYLNRHQGMAFLERVQASNLSDADRALVTRIIRATLKRPDAPGHEPSSPEAPDHTAHTSRRRHRHSA
Ga0187892_1016416533300019458Bio-OozeLLWTTVATTMLQRLNLLKDLLGVYLNRHQGMAFLERVQASNVSDADRALVTRIIRATLKLPDAPGHEPSSPEAPDHTAHTSRRRQRHSA
Ga0179596_1009693423300021086Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA
Ga0179596_1069646313300021086Vadose Zone SoilPEPMYSLWTAGVATMLQRLKLFKHLLGIYLNPRQGMALLERVQASNLSDEDRDRVTRIMRATLKLPDAPGHERSAPDAPAPSARASRRRDHHAS
Ga0212128_1003305953300022563Thermal SpringsMCLLWTTVATTMFQRLKLLKDFLGVALNRRHGMALLERVQASNLRDDDRALVTRIMRATLRLPDERVHEPSAPGASAPSVPAAHRRQRDTF
Ga0209827_1013918223300025149Thermal SpringsMFQRLKLLKDFLGIYLNRRQGMAFLERIQASNLSADDRDLVSRIIRATLKLPDDRGHEPSSPDAPAPSAPASRRRHRHAS
Ga0209899_100199653300027490Groundwater SandVLALDCGGPTMFQRLKLLKDFLGIYLNQRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPDHSAQISRRRQRP
Ga0209106_108111713300027616Forest SoilASASSWTAVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA
Ga0209466_102854913300027646Tropical Forest SoilMYLLWTAVATTILQRFKRLKDFLSVYLNRQQGRAFLERIQASNLSDADRDLITHILRATLKLPDAPVQEPSSPEAPDHSAHTARHHPRRAS
Ga0209388_100641853300027655Vadose Zone SoilMCSLWTAVATTMLQRLKLLKDFLGVYLHRQQGMAFLERVHASHLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAHISRRRQRP
Ga0209814_1001184023300027873Populus RhizosphereMCLLWTAVATTMLQRLKLLKDLLGVYLNRQQGLALLERVQASNLSDADRALVTRIMRVTLKLPEAPVHEPSSPEAPDHAAYTSRCRRRHSA
Ga0209481_1019065823300027880Populus RhizosphereMLQRLKLLKDLLGVYLNRQQGLALLERVQASNLSDADRALVTRIMRVTLKLPEAPVHEPSSPEAPDHAAYTSRCRRRHSA
Ga0209590_1059442813300027882Vadose Zone SoilMCLLWTAVATTMLQRLKLLKDLLGLYLNRQQGIALLERAQASNLSDADRALVTRIMRATLKLPDAPVQEPSSPEAPDHAAHTSRRRRRHSA
Ga0209590_1098371713300027882Vadose Zone SoilMGSLWTTVATTMLQRLKLLKDLLGIYLNRQHGLAVLERVQASNLSDADRDLVSRIMRAMLRLPADLGGHKPSAPDAPAPSAHASCRCQRHTT
Ga0209488_1051312023300027903Vadose Zone SoilMCSLWTAVATTMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSDADRDLVTRIIRATLKLPADPVHKPSSPAAPDHSAQISRRRQRP
Ga0209860_103604023300027949Groundwater SandMFQRLKLLKDFLGIYLNQRQGIAFLERIQASDLSADDRDLVSRIIRATLKLPADPVHEPSSPEAPDHSAQISRRRQRP
Ga0209859_100563143300027954Groundwater SandMFQRLKLLKRLLCLYLSRQQGMALLERVEASTLSNEDRDLVTRLIRATLRLPDDRVHEPSSPEASAPSAHAARCRQRDSS
Ga0209857_108806923300027957Groundwater SandMFQRLKLLQDFLGVALNRRHGRAFLERVQASNLRDEDRDLVTRLIRATLRLPDDRVHEPSSPEASAPSAHAARC
Ga0137415_1024459923300028536Vadose Zone SoilMMFQRLKLLKDFLGLYLNQRQGMAFLERIQTRDLSADDRDLVSRIMRATLKLPADPVHEPSSPEAPDQSAPISHRRQRP
Ga0137415_1090623323300028536Vadose Zone SoilMFQRLKLLKDFLGVYLNRQRGMAFLERVQASNLSAADRALVTRIIRATLKLPDASGQESSAPEAPDHTVQTSRRRHRRSA
Ga0307504_1005097123300028792SoilMCSLWTAVATTMFQRFKLLKDFLGVYLNRQQGMAFLERVQASNLSDADRDLVTRIIRATLKLPDAPVQEPSSPEAPDHTAQTSRHRPRRSS
Ga0307278_1034654713300028878SoilMCLLWTAVATMLPQLKLLKDFLGVYLNRQQGLAFLERVQASNVSDADRALVTRLIRATLKLPDAPGQEPSSPEAPDHTAHTSRRRHRHSA
Ga0308204_1033147523300031092SoilLKLLKDFLGLSLNQRQGRAFLERLQASDLSADDRDLVSRIIRATLKLPGDPMHEPSSPEASAPSAHAARRRQRDTS
Ga0310909_1139480923300031947SoilMCSLWTAVTTPMLQRLKLLKALLGVYLNQHQGMALLERVQASNLSEADRALVTRIMRATLKLPDAPVHEPSSPAAPDHAAHTSRCILPGTLLLIPRGGEICVAGQ
Ga0307471_10282102913300032180Hardwood Forest SoilKLLKDFLGVYLNRQQGRAFLERVQASNLSDADRDLVTRIIRATLKLPNDPVHEPSAPEAPDYSAHASCRRDRHVS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.