Metagenome / Metatranscriptome Family F089897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089897
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	65 residues
Representative Sequence	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Number of Associated Samples	27
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.54 %
% of genes near scaffold ends (potentially truncated)	17.59 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (72.222 % of family members)
Environment Ontology (ENVO)	Unclassified (75.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (74.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.52% β-sheet: 17.39% Coil/Unstructured: 76.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13359	DDE_Tnp_4	1.85
PF10551	MULE	0.93
PF09826	Beta_propel	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
All Organisms	root	All Organisms	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
cellular organisms	root	All Organisms → cellular organisms	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	7.41 %
Oomycota	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	7.41 %
Pythiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	7.41 %
Pythiaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	7.41 %
Pythium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	7.41 %
Pythium insidiosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	6.48 %
Skeletonemataceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae	0.93 %
Pythium insidiosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	6.48 %
Skeletonema	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema	0.93 %
Pythium insidiosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2.78 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2.78 %
Skeletonema marinoi-dohrnii complex	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex	0.93 %
Pythium insidiosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.67 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2.78 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2.78 %
Skeletonema marinoi	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	0.93 %
Pythium insidiosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005525\|Ga0068877_10221413	Not Available	1124	Open in IMG/M
3300005525\|Ga0068877_10643384	Not Available	572	Open in IMG/M
3300005831\|Ga0074471_10329562	Not Available	1088	Open in IMG/M
3300007543\|Ga0102853_1116100	Not Available	513	Open in IMG/M
3300007559\|Ga0102828_1202860	Not Available	509	Open in IMG/M
3300007860\|Ga0105735_1054973	Not Available	791	Open in IMG/M
3300007953\|Ga0105738_1078264	Not Available	574	Open in IMG/M
3300007955\|Ga0105740_1018276	Not Available	957	Open in IMG/M
3300008115\|Ga0114348_1086218	Not Available	716	Open in IMG/M
3300008263\|Ga0114349_1033395	Not Available	2560	Open in IMG/M
3300008263\|Ga0114349_1129442	Not Available	1044	Open in IMG/M
3300008263\|Ga0114349_1241635	Not Available	598	Open in IMG/M
3300008263\|Ga0114349_1260040	Not Available	551	Open in IMG/M
3300008265\|Ga0114361_1016235	Not Available	5347	Open in IMG/M
3300008265\|Ga0114361_1017543	Not Available	2654	Open in IMG/M
3300008265\|Ga0114361_1028268	Not Available	1928	Open in IMG/M
3300008265\|Ga0114361_1046148	Not Available	1395	Open in IMG/M
3300008265\|Ga0114361_1173268	Not Available	673	Open in IMG/M
3300009079\|Ga0102814_10864606	Not Available	501	Open in IMG/M
3300011009\|Ga0129318_10258181	Not Available	578	Open in IMG/M
3300011009\|Ga0129318_10294855	Not Available	550	Open in IMG/M
3300013372\|Ga0177922_11203264	Not Available	798	Open in IMG/M
3300020048\|Ga0207193_1106633	Not Available	2524	Open in IMG/M
3300020162\|Ga0211735_11450819	Not Available	531	Open in IMG/M
3300021336\|Ga0210307_1259803	Not Available	524	Open in IMG/M
3300021845\|Ga0210297_1006422	Not Available	606	Open in IMG/M
3300022385\|Ga0210376_1092372	Not Available	529	Open in IMG/M
3300027806\|Ga0209985_10123010	Not Available	1308	Open in IMG/M
3300032092\|Ga0315905_11238918	Not Available	606	Open in IMG/M
3300033984\|Ga0334989_0006980	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae → Pythium → Pythium insidiosum	5697	Open in IMG/M
3300033984\|Ga0334989_0009158	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	5055	Open in IMG/M
3300033984\|Ga0334989_0009677	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	4932	Open in IMG/M
3300033984\|Ga0334989_0014821	Not Available	4074	Open in IMG/M
3300033984\|Ga0334989_0015749	Not Available	3960	Open in IMG/M
3300033984\|Ga0334989_0020713	Not Available	3488	Open in IMG/M
3300033984\|Ga0334989_0021246	Not Available	3447	Open in IMG/M
3300033984\|Ga0334989_0021264	Not Available	3446	Open in IMG/M
3300033984\|Ga0334989_0022555	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	3348	Open in IMG/M
3300033984\|Ga0334989_0022916	Not Available	3324	Open in IMG/M
3300033984\|Ga0334989_0024210	Not Available	3237	Open in IMG/M
3300033984\|Ga0334989_0037681	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2628	Open in IMG/M
3300033984\|Ga0334989_0038232	Not Available	2611	Open in IMG/M
3300033984\|Ga0334989_0040416	Not Available	2543	Open in IMG/M
3300033984\|Ga0334989_0040997	Not Available	2525	Open in IMG/M
3300033984\|Ga0334989_0045886	Not Available	2389	Open in IMG/M
3300033984\|Ga0334989_0047063	Not Available	2360	Open in IMG/M
3300033984\|Ga0334989_0061967	Not Available	2062	Open in IMG/M
3300033984\|Ga0334989_0069691	Not Available	1942	Open in IMG/M
3300033984\|Ga0334989_0071474	Not Available	1917	Open in IMG/M
3300033984\|Ga0334989_0078528	Not Available	1824	Open in IMG/M
3300033984\|Ga0334989_0104620	Not Available	1571	Open in IMG/M
3300033984\|Ga0334989_0105125	Not Available	1567	Open in IMG/M
3300033984\|Ga0334989_0106807	Not Available	1554	Open in IMG/M
3300033984\|Ga0334989_0107850	Not Available	1546	Open in IMG/M
3300033984\|Ga0334989_0112519	Not Available	1512	Open in IMG/M
3300033984\|Ga0334989_0129845	Not Available	1400	Open in IMG/M
3300033984\|Ga0334989_0195378	Not Available	1113	Open in IMG/M
3300033984\|Ga0334989_0208886	Not Available	1070	Open in IMG/M
3300033984\|Ga0334989_0211106	Not Available	1063	Open in IMG/M
3300033984\|Ga0334989_0236155	Not Available	994	Open in IMG/M
3300033984\|Ga0334989_0237282	Not Available	991	Open in IMG/M
3300033984\|Ga0334989_0241843	Not Available	980	Open in IMG/M
3300033984\|Ga0334989_0279316	Not Available	895	Open in IMG/M
3300033984\|Ga0334989_0345078	Not Available	780	Open in IMG/M
3300033984\|Ga0334989_0351773	Not Available	770	Open in IMG/M
3300033984\|Ga0334989_0356569	Not Available	763	Open in IMG/M
3300033984\|Ga0334989_0357991	Not Available	761	Open in IMG/M
3300033984\|Ga0334989_0380543	Not Available	731	Open in IMG/M
3300033984\|Ga0334989_0410745	Not Available	693	Open in IMG/M
3300033984\|Ga0334989_0415066	Not Available	688	Open in IMG/M
3300033984\|Ga0334989_0463386	Not Available	638	Open in IMG/M
3300033984\|Ga0334989_0510031	Not Available	595	Open in IMG/M
3300033984\|Ga0334989_0514795	Not Available	591	Open in IMG/M
3300033984\|Ga0334989_0556470	Not Available	558	Open in IMG/M
3300033984\|Ga0334989_0639767	Not Available	504	Open in IMG/M
3300034022\|Ga0335005_0041860	Not Available	3120	Open in IMG/M
3300034022\|Ga0335005_0047043	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	2919	Open in IMG/M
3300034022\|Ga0335005_0102770	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1860	Open in IMG/M
3300034022\|Ga0335005_0228318	Not Available	1140	Open in IMG/M
3300034022\|Ga0335005_0270041	Not Available	1023	Open in IMG/M
3300034022\|Ga0335005_0273654	Not Available	1014	Open in IMG/M
3300034022\|Ga0335005_0361329	Not Available	844	Open in IMG/M
3300034022\|Ga0335005_0456396	Not Available	720	Open in IMG/M
3300034022\|Ga0335005_0682242	Not Available	545	Open in IMG/M
3300034023\|Ga0335021_0211026	Not Available	1077	Open in IMG/M
3300034064\|Ga0335001_0112325	Not Available	1556	Open in IMG/M
3300034064\|Ga0335001_0193672	Not Available	1137	Open in IMG/M
3300034064\|Ga0335001_0270306	Not Available	934	Open in IMG/M
3300034064\|Ga0335001_0641514	Not Available	556	Open in IMG/M
3300034068\|Ga0334990_0068638	Not Available	1902	Open in IMG/M
3300034068\|Ga0334990_0298379	Not Available	876	Open in IMG/M
3300034068\|Ga0334990_0468816	Not Available	673	Open in IMG/M
3300034167\|Ga0335017_0056583	Not Available	2315	Open in IMG/M
3300034167\|Ga0335017_0069607	Not Available	2077	Open in IMG/M
3300034167\|Ga0335017_0087665	Not Available	1834	Open in IMG/M
3300034167\|Ga0335017_0128512	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1484	Open in IMG/M
3300034167\|Ga0335017_0271713	Not Available	952	Open in IMG/M
3300034167\|Ga0335017_0348569	Not Available	813	Open in IMG/M
3300034167\|Ga0335017_0360195	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	796	Open in IMG/M
3300034167\|Ga0335017_0391064	Not Available	755	Open in IMG/M
3300034167\|Ga0335017_0510526	Not Available	635	Open in IMG/M
3300034167\|Ga0335017_0665534	Not Available	532	Open in IMG/M
3300034167\|Ga0335017_0693062	Not Available	518	Open in IMG/M
3300034167\|Ga0335017_0713755	Not Available	508	Open in IMG/M
3300034168\|Ga0335061_0052323	Not Available	2180	Open in IMG/M
3300034168\|Ga0335061_0240340	Not Available	954	Open in IMG/M
3300034168\|Ga0335061_0403868	Not Available	705	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.89%
Marine	Environmental → Aquatic → Marine	10.19%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	85.19%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.56%
Coastal	Environmental → Aquatic → Marine → Coastal	4.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	84.26%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	72.22%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.19%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.78%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.93%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021845	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R876 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068877_102214132	3300005525	Freshwater Lake	MWKAARPSSGMDSSNPHRWRGKRLHYGDVVCHVVVLFVPFLVLFVPSRLVVISRRM*
Ga0068877_106433841	3300005525	Freshwater Lake	LDLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM*
Ga0074471_103295621	3300005831	Sediment (Intertidal)	LNLLNRFDGGISTNMRKAARPSGGMDSSNPHRWRGEQLHHHGDGVCLLFVLFCAVSSD
Ga0102853_11161001	3300007543	Estuarine	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVIVTRCM*
Ga0102828_12028602	3300007559	Estuarine	LNLLNRFDGGIGTNMHKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM*
Ga0105735_10549732	3300007860	Estuary Water	MNLLNRFDGGIGTNMRKAVHPSSGMDSSNLHRWRGERLHHHGGGVCLLFVLFVPSHLVVVTRRM*
Ga0105738_10782641	3300007953	Estuary Water	MKHRGKHKLINFYINLLNLLNRFDGGIGTSMRKAAHPLGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM*
Ga0105740_10182762	3300007955	Estuary Water	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGKRLHNHGDGVCLFVLFVPSRLVVVTRHM*
Ga0114348_10490412	3300008115	Freshwater, Plankton	MDAVSATIVAGGRARIRRGSYKYINFYFNLWNLLNRFDGDIETNMRKAAHPSGGMGSSNPCRWRGERLHHGGGVSVVCANVPPRLVVATRRM*
Ga0114348_10862181	3300008115	Freshwater, Plankton	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHNHGDGVCLFVLFVPSRLVIVTRRM*
Ga0114349_10333952	3300008263	Freshwater, Plankton	LNLLNRFGGGIGTSMRKAAHPSGGVGSSNPRRWRGKQLHNHGDGVCLFVLFVPSRLVVITRRV*
Ga0114349_11294421	3300008263	Freshwater, Plankton	LNLLNRFDGGIGTSMRKAADPSGGVGSSNPRRWRGERLHNHGDGDCLFVLLVPSRLVVVTRHT*
Ga0114349_12416351	3300008263	Freshwater, Plankton	SPNSIKYKGKHKLINFYINLLNLLNRFNGGIGTSMRKAAHPLGSVGSSNPRRWRGEQLHNHGDGVCLFVLFVLSRLVVINRCM*
Ga0114349_12600402	3300008263	Freshwater, Plankton	LNLLNRFDGGIGTSMRKAAHPLGGVGSSNPRRWRGERLHNHGDGVCLFVLFVPSRLVVLTRRM*
Ga0114361_10162352	3300008265	Freshwater, Plankton	LNLLNRFNGGIGTSMCKAAHPSGSVGSSNPRRWRGEQLHNHGDGVCLFVLFVLSRLVVINRCM*
Ga0114361_10175431	3300008265	Freshwater, Plankton	LLNLLNRFDSGIGKNMRKAAHYLGGMDSSNPRRWRGERLHHHGDGVRLLFVLFVPSHLVVFTRRM*
Ga0114361_10282682	3300008265	Freshwater, Plankton	LNLLNLFAGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHNHGDGVCLFVLSVPSRLVVVTHRM*
Ga0114361_10461482	3300008265	Freshwater, Plankton	LNLLNRFDGGIGTSMRKAAHPSGGVRSSNPRRWRGERLHNHGDGDCLFVLLVPSRLVVVTRRT*
Ga0114361_11732681	3300008265	Freshwater, Plankton	LNLLNRFDGGIETSMRKAAHPSGSVGSSNPRRWRGERLHNHGDGVCLFVLFVPS
Ga0102814_108646061	3300009079	Estuarine	LNLLNRFDGGIGTSMRKAAHPSGGMGSSNPRRWRGKRLHNHGDGVCLFVLFVPSRLVVVTRHM*
Ga0129318_102581812	3300011009	Freshwater To Marine Saline Gradient	LNLLNRFNGGIGTSMRKAARPSGGVGSSNPRRWRGERLHHHGGGVCLLFVLFVPSRLVVVTCRM*
Ga0129318_102948551	3300011009	Freshwater To Marine Saline Gradient	LNLLNRFDGGIGTSMRKAAHPWSGVGSSNPCRWRGEQLHHHGVGVCLFFVLFVP
Ga0177922_112032641	3300013372	Freshwater	LNLSNRFDGGIGKIMQKAARPSSGMDSSYPHRWRGKRLHYGDVVCHVVVLFVPFLVLFVPSRLVVISRRM*
Ga0207193_11066332	3300020048	Freshwater Lake Sediment	LNLLNRFDGGVKKIMRAARPSSGMDSSNPRRWRGKQLHHMVMMFVMLFVLFVRSRLVVVTCRM
Ga0211735_114508191	3300020162	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVSSRLVVVTRRM
Ga0210307_12598031	3300021336	Estuarine	MKHRGKHKLINFYINLLNLLNCFDGDIETNMRKAAHPSGGMGSSNPCRWRGERLHHGGGVCLLFVLFVPSHLVVVSRHI
Ga0210297_10064221	3300021845	Estuarine	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0210376_10923721	3300022385	Estuarine	LNLLNRFDGGGIGTSMRKDAHPSGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0209985_101230101	3300027806	Freshwater Lake	LDLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0315905_112389181	3300032092	Freshwater	RFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHNHGDGVCLFVLFVPSRLIVVTRRM
Ga0334989_0006980_5530_5697	3300033984	Freshwater	GIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGGGVCLLFVLFVPSRLVVVTCRM
Ga0334989_0009158_3105_3299	3300033984	Freshwater	LNLLNRFDGGIMTNMRKAAHPSGGMDSSNPRRWRGKQLHHHGDGVCLLFVLFVPSSLVVVTRRM
Ga0334989_0009677_939_1142	3300033984	Freshwater	LNLLNRFDGGIGTSMRKAAHPSGGMDSSNPHRWRGERLHHHGDGVCLLFVLFGLFVPSRLVVVTHRM
Ga0334989_0014821_530_724	3300033984	Freshwater	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVLSRLVVVTCRM
Ga0334989_0015749_3758_3952	3300033984	Freshwater	LNLLNCFDGGIGTSMRKAAHPSGGMGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVIITRRM
Ga0334989_0020713_3286_3480	3300033984	Freshwater	LNLLNRFDGGIGMIMRKAAHPSGGMDSSNPRRWRGEQLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0021246_1774_1968	3300033984	Freshwater	LNLLNCFDGGIGKIMQKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSCLVVVTRRM
Ga0334989_0021264_112_306	3300033984	Freshwater	LNLLNHFDGGIGTNMRKAANPSGGMDSSNPRRWRGERLHHHGDGVCLVLVLFVPSRLVVVTRRM
Ga0334989_0022555_2110_2304	3300033984	Freshwater	LNLLNCFDGGVGKMMRKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0022916_1603_1848	3300033984	Freshwater	MDAVSATIVAGGRDLLNLLNRFDGGVGKIMCKAARRSSGINSSNPCRWRGERLHHDGEVVGVCLLFVLFVSSRLVLVTRRV
Ga0334989_0024210_2009_2224	3300033984	Freshwater	LNLLNRFDGGIGTNMRKATRPSSGMDSSNPRHWRGERLHHHGDGVCLLFVLFGLLFVLFVPSRLVVVTRRM
Ga0334989_0037681_1654_1848	3300033984	Freshwater	LNLLNRFDGGIGTNMRKATHPSGGMDSSNPRRWRGKRLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0038232_1570_1764	3300033984	Freshwater	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPHRWRGEQLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0040416_1264_1464	3300033984	Freshwater	LNLWNLFNRFDGDIGTNMRKAAHPSGGMGSSNPCRWRGKRLNHGGGVCLLFVLFVPSRLVVATRRM
Ga0334989_0040997_1070_1264	3300033984	Freshwater	LNLLNCFDGGIGKIMRKAAHPSSGMDSSNPRRWRGKRLHHHGDGVCLLFVLFVLSRLVIVTRRM
Ga0334989_0045886_1848_2042	3300033984	Freshwater	LNLLNRFDGGIETNMHKAAHPSGGMGSSKSRRWRGKRLHHHGDGVCQLFVLFVSFRLVVVTRRM
Ga0334989_0047063_1127_1321	3300033984	Freshwater	LNLLNCFDGGVGKIMRKAARPSSGMDSSNPRRWRGEQLHHHGDGVCLLFVLFVPSDLVVVTRRM
Ga0334989_0061967_1132_1326	3300033984	Freshwater	LNLLNRFDGGIGTSMRKAAHPLGGVGSSNPRRWRGERFHHHGGGVCLLFELFVPSRQVVVTRRM
Ga0334989_0069691_813_1031	3300033984	Freshwater	LNLLNRFDGGIRTNMRKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFGLLFVLFVPSCLVVVTRRIM
Ga0334989_0071474_1593_1787	3300033984	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLVLVLFVPSRLVVVTRRM
Ga0334989_0078528_617_811	3300033984	Freshwater	LNLLNRFDGGIGTSMCKAAHPSGGVGSSNPRRWRGKWLHHHGDGVYLLFVLFVPSRLVVVTLRM
Ga0334989_0104620_774_968	3300033984	Freshwater	LNLLNRIDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGFCLLFVLFVPSRLVVVTRRM
Ga0334989_0105125_424_618	3300033984	Freshwater	LNLLNCFDGGIGKIMQKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTCRM
Ga0334989_0106807_40_234	3300033984	Freshwater	LNLLNRFNGGIGKIMQKAAHPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLFVITCRM
Ga0334989_0107850_1127_1321	3300033984	Freshwater	LHLLNRFDGGVGKIMRKAVHPSSGMDSSNPHRWRGERLHHHGGGVCLLFVLFVPSHLVVVSRHI
Ga0334989_0112519_141_335	3300033984	Freshwater	LNLLNRFNGGIGTSMRKAAHPSGGVGSSNPRRWRGEQLHHHGDGVCLLFVLFVPSRLVVITRRM
Ga0334989_0129845_1043_1237	3300033984	Freshwater	LNLLNRFDGSIRTIMRKAAHPLGGVGSSNPRRWRGKRLHHHGDGVYLLFVLFVPSRLVVFTHRM
Ga0334989_0195378_271_465	3300033984	Freshwater	MNLLNRFDGGIGTNMRKAAHPSGGMDSSNPCRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0208886_390_605	3300033984	Freshwater	MNFYFNLLNLLNCFDGGVGKIMQKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0211106_505_678	3300033984	Freshwater	MRKAARPSSGMDLSNQRHWRGERLHHHGDGLCLLFVLFGLLFVLFVLSCLVVVTRRM
Ga0334989_0236155_42_242	3300033984	Freshwater	LNLWNLFNRFDGDIGTNMRKASHPSGGMGSSNPCRWRGKRLHHGGGVCLLFLLFVPSRLVVVTRRM
Ga0334989_0237282_369_563	3300033984	Freshwater	LNLLNRFNGGIGTSMRKATHPSGGVGSSNPRRWRGERLHHHGGGVCLLFVLFVPSRLVVVTRRM
Ga0334989_0241843_437_631	3300033984	Freshwater	LNLLNRFDGGIETNMHKAAHPSGGMGSSKSRRWRGERLHHHGDGVCQLFVLFVPSRLVVVTRRM
Ga0334989_0279316_406_600	3300033984	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSLLVVVTRRM
Ga0334989_0345078_349_552	3300033984	Freshwater	LNLLNRFNGGIGTNMRKAAHPSGGMDSSNPHRWRGEQLHHHGDGVCLLFVLFCAVSSDRRHSSYVDK
Ga0334989_0351773_348_542	3300033984	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPHRWRGEQLHHHGDGFVCCLCFFVPSRLIVITRRM
Ga0334989_0356569_486_680	3300033984	Freshwater	LNLLNRFDGGIGTNMRKAARQSGGMDSSNPRRWRGERLHHHGDGVCLLFVLLVPSRLVVVTRRM
Ga0334989_0357991_48_233	3300033984	Freshwater	LNLLIRFDGGVRKIMRKAARSSSGMDSSNPRRWRGKRLHHHGDGVCLLFVLFVPSRLVVI
Ga0334989_0380543_137_316	3300033984	Freshwater	LLDGGVGKIMRKAARPSSGMDSSNPHRWRGKRLHHHGDGVCLLFVLFVPSCLVIISRRM
Ga0334989_0410745_3_182	3300033984	Freshwater	MNLLNRFIGVLGKIMRKAAHPLDGVGSSNRRGMRGWRLHHHGDGVCEVFVLCVLVSSGRR
Ga0334989_0415066_309_503	3300033984	Freshwater	LNLLNRFDGGIGTHMRKATHPSGGMDSSNPRRWRGERLHHHGDGVCRLFVLFVPSRLVVVTRRM
Ga0334989_0463386_103_297	3300033984	Freshwater	LNLLNRFDGGIGTNMCKAAHPSGGMDSSNPHRWRGERLHHHGDGVGLLFVLFVLSRLVVVTRRM
Ga0334989_0510031_406_594	3300033984	Freshwater	LLNRFDGGIGTNMRKAAHPSGGMDSSNPHRWRGKQLHHHGDGFVCCLCFFVPSRLIVITRRM
Ga0334989_0514795_92_286	3300033984	Freshwater	LNLLNCFDNGIGTNMLKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLFLVLFVPSRLVVVTRRM
Ga0334989_0556470_346_558	3300033984	Freshwater	NFYFNLLNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGEQLHHHGDGVCLLFVLFVPSRLVVVTHRM
Ga0334989_0639767_200_397	3300033984	Freshwater	LNLLNRFDGGIGTNMHKAAHPSGGMDSSNPRRWRGERLHHHHGDGVCLLLVLFVPSRLVVVTRRM
Ga0335005_0041860_2650_2901	3300034022	Freshwater	MNSIKHRGKHKIIYFYINLLNLLNHFNGGIGTSMRKAAHPLGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLAVVTRRM
Ga0335005_0047043_1482_1676	3300034022	Freshwater	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHRHGDGVCLLFVLFVPSHLVVVTRRM
Ga0335005_0102770_85_279	3300034022	Freshwater	LNLLNCFDGGVGKIMRKAARPSSGMDLSNSRHWRGAQLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335005_0228318_146_340	3300034022	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMNSSNPRRWRGERLHHHGDGVCLVLVLFVPSRLVVVTRRM
Ga0335005_0270041_191_385	3300034022	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPYRWRGEQLHHHGDGFVCCLCFFVPSCLIVITRRM
Ga0335005_0273654_563_757	3300034022	Freshwater	LNLLNRFDGGIGTNMRKAAQPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLLVPSRLVVVTRRM
Ga0335005_0361329_2_214	3300034022	Freshwater	NFYINLLNILNRFNGSIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGGGVCLLFVLFVPSRLVVVTRRM
Ga0335005_0456396_3_221	3300034022	Freshwater	LIYFYINLLNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGKQLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335005_0682242_135_329	3300034022	Freshwater	LNLLNRFDGGIGTNMSKAANPSGRMDSSNPRRWRGKRLHHHGDGVCQLFVLFVSFRLVVVTRRM
Ga0335021_0211026_595_789	3300034023	Freshwater	LNLLNCFDGGIGTNMRKAAHPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335001_0112325_828_1013	3300034064	Freshwater	LNLLIRFDGGVRKIMRKAARSSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVI
Ga0335001_0193672_507_701	3300034064	Freshwater	LNLLNCFNGGIGTNMRKAAHPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335001_0270306_1_177	3300034064	Freshwater	FDGGIGTNMHKAAHPSGGMDSSNPRRWRGEQLHHHGDGVCLLLVLFVPSRLVVVTRRM
Ga0335001_0641514_349_555	3300034064	Freshwater	YINLLNLLNRFDGGIGTSMRKAAHPSGGVGSSNPHRWRGEQLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0334990_0068638_1020_1214	3300034068	Freshwater	LYLLNCFDGGIGKIMQKAARPSSGMDSSNPRRWRGERLHHYGDGVCLLFVLFVPSRLVVVTCRM
Ga0334990_0298379_671_874	3300034068	Freshwater	INLLNLLNRFNGGIVTSMRKAAHPSDGVGSSNPRRWRGERLHHHGGGVCLLFVLFVSSRPVVVTRRM
Ga0334990_0468816_60_254	3300034068	Freshwater	LNLLNRFDGGIETNMHKAAHPSGGMGSSKSRRWRGERLHHHGDGVCQLFVLFVSFRLVVVTRRM
Ga0335017_0056583_1681_1875	3300034167	Freshwater	LNLLNRFDGGIGTSMRKAAHPSGGVGSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTCRM
Ga0335017_0069607_1187_1381	3300034167	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDPSNPRRWRGERLHHHGDGVGLLFVLFVSSRLVVVTRRM
Ga0335017_0087665_1528_1722	3300034167	Freshwater	LNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLLVLFVPSRLVVVTRRM
Ga0335017_0128512_113_307	3300034167	Freshwater	LNLLNCFDGGIGTNMRKAAHPSGGMDSSNPHRWRGEQLHHHGDGFVCCLCFFVPSRLIVITRRM
Ga0335017_0271713_117_314	3300034167	Freshwater	LLNLLNRFDGGIGTNMRKAAHPSGGMDSSNPHRWRGEQLHHHGDGFVCCLCFFVPSCLIVITRRM
Ga0335017_0348569_493_687	3300034167	Freshwater	LNLLNRFDGGIETNMHKAAHPSGGMGSSKSRRWRGERLHHHGDGVCQLFVLFVSSRLVVVTRRM
Ga0335017_0360195_1_180	3300034167	Freshwater	MNFYLNLWNLFNRFDGNIGTNMRKAAHPSGGMGSSNPCRWRGKRLHHGGGVCLLFVLFVP
Ga0335017_0391064_545_754	3300034167	Freshwater	FYINLLNLLNRFDGGIGTSMRKAAHPLGGVGSSNPRRWRGERLHHHGGGVCLLFELFVPSRQVVVTRRM
Ga0335017_0510526_422_634	3300034167	Freshwater	NFYFNLLNLLNRFDGGIGTNMRKAAHPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSLLVVVTRRM
Ga0335017_0665534_1_192	3300034167	Freshwater	NLLNCFDGGVGKIMRKAARPSSDMDSSNPRRWRGERLHQHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335017_0693062_48_233	3300034167	Freshwater	LNLLIRFDGRVRKIMRKAARSSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVI
Ga0335017_0713755_69_263	3300034167	Freshwater	LNLLNRFDGGIGTNMRKAAQPSGGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTRRM
Ga0335061_0052323_1200_1394	3300034168	Freshwater	LNLLNCFDGGVGKIMRKAARPSSGMDSSNPRRWRGERLHHHGDGVCLLFVLFVPSRLVVVTHRM
Ga0335061_0240340_156_356	3300034168	Freshwater	LNLWNLFNRFDGDIGTNMRKAAHPSGGMGSSNPCHWRGERLHHGGGVCLLFLLFVPSRLVVVTRRM
Ga0335061_0403868_35_229	3300034168	Freshwater	LNLLNRFDGSIRTIMRKAAHPLGGVGSSNPRRWRGKRLHHHGDGVCLLFVLFVPSRLVVFTRRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences