Metagenome / Metatranscriptome Family F089582

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089582
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	62 residues
Representative Sequence	SSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARWRAERTR
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.92 %
% of genes near scaffold ends (potentially truncated)	93.58 %
% of genes from short scaffolds (< 2000 bps)	88.99 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.633 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (24.771 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.119 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.24% β-sheet: 0.00% Coil/Unstructured: 54.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02604	PhdYeFM_antitox	1.83
PF00676	E1_dh	0.92
PF13560	HTH_31	0.92
PF00583	Acetyltransf_1	0.92
PF13401	AAA_22	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.83
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.83
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.92
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
All Organisms	root	All Organisms	40.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
cellular organisms	root	All Organisms → cellular organisms	40.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	31.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	31.19 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	31.19 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	31.19 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.63 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	31.19 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10355034	Not Available	515	Open in IMG/M
3300003368\|JGI26340J50214_10173591	Not Available	536	Open in IMG/M
3300004082\|Ga0062384_100361901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300005161\|Ga0066807_1028083	Not Available	602	Open in IMG/M
3300005184\|Ga0066671_10407769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	870	Open in IMG/M
3300005445\|Ga0070708_101031252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	771	Open in IMG/M
3300005468\|Ga0070707_100121557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2535	Open in IMG/M
3300006028\|Ga0070717_10770994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	874	Open in IMG/M
3300006028\|Ga0070717_10865405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	823	Open in IMG/M
3300006576\|Ga0074047_12013463	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1149	Open in IMG/M
3300009088\|Ga0099830_10234405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1447	Open in IMG/M
3300009520\|Ga0116214_1147207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	876	Open in IMG/M
3300009521\|Ga0116222_1102707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1230	Open in IMG/M
3300009522\|Ga0116218_1202292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	896	Open in IMG/M
3300009523\|Ga0116221_1187097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	899	Open in IMG/M
3300009672\|Ga0116215_1451819	Not Available	556	Open in IMG/M
3300009683\|Ga0116224_10235900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	874	Open in IMG/M
3300009700\|Ga0116217_10174781	Not Available	1422	Open in IMG/M
3300009824\|Ga0116219_10065602	Not Available	2136	Open in IMG/M
3300009839\|Ga0116223_10076153	Not Available	2147	Open in IMG/M
3300010326\|Ga0134065_10320808	Not Available	600	Open in IMG/M
3300010343\|Ga0074044_10041083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3210	Open in IMG/M
3300010379\|Ga0136449_102203173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	804	Open in IMG/M
3300010379\|Ga0136449_103158468	Not Available	638	Open in IMG/M
3300010379\|Ga0136449_103340361	Not Available	616	Open in IMG/M
3300010398\|Ga0126383_10464135	Not Available	1318	Open in IMG/M
3300012199\|Ga0137383_10688152	Not Available	747	Open in IMG/M
3300012199\|Ga0137383_11270215	Not Available	526	Open in IMG/M
3300012202\|Ga0137363_10889589	Not Available	756	Open in IMG/M
3300012207\|Ga0137381_10653635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	915	Open in IMG/M
3300012350\|Ga0137372_10337147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1158	Open in IMG/M
3300012351\|Ga0137386_10231178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1329	Open in IMG/M
3300012356\|Ga0137371_10101977	Not Available	2234	Open in IMG/M
3300012917\|Ga0137395_10852552	Not Available	660	Open in IMG/M
3300014493\|Ga0182016_10484004	Not Available	718	Open in IMG/M
3300016357\|Ga0182032_10262423	Not Available	1348	Open in IMG/M
3300017928\|Ga0187806_1299685	Not Available	566	Open in IMG/M
3300017932\|Ga0187814_10298106	Not Available	617	Open in IMG/M
3300017933\|Ga0187801_10468271	Not Available	530	Open in IMG/M
3300017943\|Ga0187819_10582501	Not Available	635	Open in IMG/M
3300017966\|Ga0187776_10525921	Not Available	813	Open in IMG/M
3300017974\|Ga0187777_10348947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1017	Open in IMG/M
3300017975\|Ga0187782_11051651	Not Available	634	Open in IMG/M
3300017994\|Ga0187822_10249818	Not Available	609	Open in IMG/M
3300018001\|Ga0187815_10154122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	972	Open in IMG/M
3300018006\|Ga0187804_10365787	Not Available	635	Open in IMG/M
3300018007\|Ga0187805_10063451	Not Available	1661	Open in IMG/M
3300018007\|Ga0187805_10523008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	557	Open in IMG/M
3300018086\|Ga0187769_10307508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1185	Open in IMG/M
3300018088\|Ga0187771_11349759	Not Available	605	Open in IMG/M
3300018090\|Ga0187770_11767411	Not Available	506	Open in IMG/M
3300021377\|Ga0213874_10281904	Not Available	621	Open in IMG/M
3300021405\|Ga0210387_11237322	Not Available	647	Open in IMG/M
3300021432\|Ga0210384_11884252	Not Available	504	Open in IMG/M
3300021478\|Ga0210402_10682353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	950	Open in IMG/M
3300021861\|Ga0213853_10971306	Not Available	556	Open in IMG/M
3300022731\|Ga0224563_1012317	Not Available	708	Open in IMG/M
3300024295\|Ga0224556_1085592	Not Available	773	Open in IMG/M
3300025885\|Ga0207653_10262387	Not Available	664	Open in IMG/M
3300025922\|Ga0207646_11010150	Not Available	735	Open in IMG/M
3300025922\|Ga0207646_11149168	Not Available	682	Open in IMG/M
3300025928\|Ga0207700_10215331	Not Available	1626	Open in IMG/M
3300026315\|Ga0209686_1128412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	828	Open in IMG/M
3300026316\|Ga0209155_1222358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300026340\|Ga0257162_1023556	Not Available	746	Open in IMG/M
3300027570\|Ga0208043_1170343	Not Available	560	Open in IMG/M
3300027625\|Ga0208044_1091396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	898	Open in IMG/M
3300027662\|Ga0208565_1117744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	790	Open in IMG/M
3300027854\|Ga0209517_10309023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	920	Open in IMG/M
3300027875\|Ga0209283_10605238	Not Available	694	Open in IMG/M
3300027894\|Ga0209068_10836412	Not Available	543	Open in IMG/M
3300027905\|Ga0209415_10419848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1069	Open in IMG/M
3300027905\|Ga0209415_10479375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	967	Open in IMG/M
3300029999\|Ga0311339_10277031	Not Available	1823	Open in IMG/M
3300030494\|Ga0310037_10127618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1165	Open in IMG/M
3300030520\|Ga0311372_10051244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8028	Open in IMG/M
3300031226\|Ga0307497_10194117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	875	Open in IMG/M
3300031668\|Ga0318542_10169428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1092	Open in IMG/M
3300031723\|Ga0318493_10118654	Not Available	1344	Open in IMG/M
3300031723\|Ga0318493_10677404	Not Available	577	Open in IMG/M
3300031747\|Ga0318502_10458151	Not Available	762	Open in IMG/M
3300031754\|Ga0307475_11028067	Not Available	647	Open in IMG/M
3300031764\|Ga0318535_10534327	Not Available	520	Open in IMG/M
3300031769\|Ga0318526_10205429	Not Available	805	Open in IMG/M
3300031798\|Ga0318523_10046204	Not Available	2032	Open in IMG/M
3300031823\|Ga0307478_10627501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	899	Open in IMG/M
3300031823\|Ga0307478_10933112	Not Available	726	Open in IMG/M
3300031942\|Ga0310916_10126559	Not Available	2084	Open in IMG/M
3300031946\|Ga0310910_10095551	Not Available	2197	Open in IMG/M
3300032044\|Ga0318558_10581292	Not Available	560	Open in IMG/M
3300032160\|Ga0311301_10847953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1243	Open in IMG/M
3300032160\|Ga0311301_11554948	Not Available	809	Open in IMG/M
3300032160\|Ga0311301_12509008	Not Available	576	Open in IMG/M
3300032770\|Ga0335085_10352196	Not Available	1725	Open in IMG/M
3300032770\|Ga0335085_10707795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1119	Open in IMG/M
3300032782\|Ga0335082_11404814	Not Available	568	Open in IMG/M
3300032783\|Ga0335079_10231213	Not Available	2040	Open in IMG/M
3300032783\|Ga0335079_10889287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	916	Open in IMG/M
3300032783\|Ga0335079_11051918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	827	Open in IMG/M
3300032805\|Ga0335078_10291575	Not Available	2199	Open in IMG/M
3300032828\|Ga0335080_10269754	Not Available	1855	Open in IMG/M
3300032828\|Ga0335080_10733956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1026	Open in IMG/M
3300032828\|Ga0335080_12022186	Not Available	557	Open in IMG/M
3300032893\|Ga0335069_10038988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6348	Open in IMG/M
3300032896\|Ga0335075_10882278	Not Available	823	Open in IMG/M
3300033004\|Ga0335084_10602147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1125	Open in IMG/M
3300033158\|Ga0335077_10864966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	914	Open in IMG/M
3300033433\|Ga0326726_10790099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	918	Open in IMG/M
3300033502\|Ga0326731_1130866	Not Available	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.16%
Aquatic	Environmental → Aquatic	11.93%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.57%
Freshwater	Environmental → Aquatic → Freshwater	11.01%
Peat	Environmental → Terrestrial → Peat	4.59%
Sediment	Environmental → Aquatic → Sediment	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.09%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.83%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103550341	3300001356	Peatlands Soil	HLAAGTPVPVLLAVTGIAEAGSLARYARHVAGISSSTGALRARCRAELTR*
JGI26340J50214_101735911	3300003368	Bog Forest Soil	RNLTADPAAAALSLRRARSSFICDHLAAGTPVPVLLAITGIAEAGSLARYARHVPGISSSTGALRARWRAETGP*
Ga0062384_1003619012	3300004082	Bog Forest Soil	MILRKAFSLAADPAVPALSVRRARSTFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVAGISSSKGALRARCRAERTR*
Ga0066807_10280832	3300005161	Soil	RGYKNFVSNFTRGLTADPAAPRLSLRRARATFICRHLAAVTPVPVLLAITGIAEAGSLARYARHLAGVSSSKGALRARWRAERTR*
Ga0066671_104077691	3300005184	Soil	CDPGAPRLSVSRARSSFICDHLAAGTAIKTLLAITGIIEAESLARYARHVPGVSSSKAALRARWRAETAR*
Ga0070708_1010312521	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AGRCRASFICDHLAAGTPLPALLAIAGIAEAESLARYAARVPGVSSSKAALRSRWRAERTR*
Ga0070707_1001215572	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRARSAFICCHLAAGTPVPVLLAVTGIAGAGSLARYARQVPGISSSRGALRARWRAESTR*
Ga0070717_107709941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SRARSSFICDHLAAGTLLRTLLEATGIAGAESLARYARHVPGMTGSKAALRARWHAETAR
Ga0070717_108654051	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HLAAGTPVPVLLAITGIAEAGSLARYARHLAGVSSSKGALRARWRAERTR*
Ga0074047_120134632	3300006576	Soil	DARHLAAVTPVPVLLAITGIAEAGSLARYARHLAGVSSSQGALRARWRAERVARR*
Ga0099830_102344052	3300009088	Vadose Zone Soil	MLSPRRLPIRCRPRLSLRRARSSFICHHLAAGTLIPVLLAIAGIAEAGSLARYARHVPGVSSSKGALRARWHAETPR*
Ga0116214_11472071	3300009520	Peatlands Soil	LAAGTPVPVLLAVTGIAEAGSLARYARYVPGISSSKGALRARWRAEHTR*
Ga0116222_11027072	3300009521	Peatlands Soil	RRARSTFICGHLAAGTPVPVLLAVTGIAEAGSLARYARYVPGISSSKGALRARWRAEHTR
Ga0116218_12022922	3300009522	Peatlands Soil	AAGTPVPVLLAITGIAEAGSLARYARHLAGVSSSKGALRARWRAERTR*
Ga0116221_11870972	3300009523	Peatlands Soil	LAADPAAPALSMRRARSTFICGHLAAGTPVGVLLKVTGIAEAGSLARYARYVPGISSSKGALRARWRAEHTR*
Ga0116215_14518191	3300009672	Peatlands Soil	LAAGTTVPVLLAVTGIAEAGSLARYARYVPGISSSKGALRARCRAERSR*
Ga0116224_102359002	3300009683	Peatlands Soil	AAPGLSMRRARSSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVSGISPSKGALRARCRAERTR*
Ga0116217_101747811	3300009700	Peatlands Soil	FICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARCRAERTR*
Ga0116219_100656021	3300009824	Peatlands Soil	LAAGTPVPVLLAVTGIAEAGSLARYARYVPGISPSKGALRARWRAEHTR*
Ga0116223_100761531	3300009839	Peatlands Soil	TFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARCRAERTR*
Ga0134065_103208081	3300010326	Grasslands Soil	DFARCLACDPGAPRLSVSKARSSFICDHLAAGTAIKTLLAITGIIEAESLARYARHVPGVSSSKAALRARWRAETAR*
Ga0074044_100410832	3300010343	Bog Forest Soil	MILRKAFSLAADPAVPALSVRRARSTFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVAGVSSSKGVLRARWRAERTR*
Ga0136449_1022031731	3300010379	Peatlands Soil	FICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARWRAESTR*
Ga0136449_1031584681	3300010379	Peatlands Soil	NFVTNFALGLAADPAAPRMSMGRARSAFICGHLGRGTPVPVLLAITGIAEAGSLARYARHVPGISSSKGALRARWRAETPR*
Ga0136449_1033403611	3300010379	Peatlands Soil	TFICGHLATGTPVPVLLAVTGIAEAGSLARYARHLAGASSSKGALRARWRAERTR*
Ga0126383_104641352	3300010398	Tropical Forest Soil	DPGAPPLSMGRARSSFVCDHLAAGTALRVLLAITGITEAESLARYARHVPGVTASKAALRARWRAEAAQ*
Ga0137383_106881521	3300012199	Vadose Zone Soil	APRLSLNRARSTFICGHLAAGTPVGVLLAITGIDEAGSLARYARHVLGTGSSKGALRARQRAEHIR*
Ga0137383_112702151	3300012199	Vadose Zone Soil	APRLSLNRARSTFICGHLAAGTPVGVLLAITGIDEAGSLARYARHVAGISSSKGVLRARWHAERAR*
Ga0137363_108895892	3300012202	Vadose Zone Soil	CRASFICGHLAAGTTLHELLAIAGITEPESLARCAAHVPGMSSSKAALRARWHAENPR*
Ga0137381_106536351	3300012207	Vadose Zone Soil	APRLSAGRCRATFICGHLAAGTPIPALLAVSGIAGPESLARYARHVPGMNASKAALRARCRAERTP*
Ga0137372_103371471	3300012350	Vadose Zone Soil	HLAAGTPVGVLLAISGIAEAGSLARYARHVPGISSSKGALRARWRAERAR*
Ga0137386_102311781	3300012351	Vadose Zone Soil	FICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVAGIGSSKGTLRARCRAERT*
Ga0137371_101019771	3300012356	Vadose Zone Soil	PALSMRRARSSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVAGIGSSKGTLRARCRAERTR*
Ga0137395_108525521	3300012917	Vadose Zone Soil	MSRARSSFICDHLAAGTALSEILAITGIIEAESLARYARHVPGMSASKAALRARWRAGTAR*
Ga0182016_104840042	3300014493	Bog	RARSSFICDHLAAGTPVAVLLSITGIAEAGSLARYAGGVSSSKGALRARWRAERTR*
Ga0182032_102624232	3300016357	Soil	FICGHLAAGTPVGAVLAITGIAEAGSLARYARHVAGISSSTGALRARWRAESTR
Ga0187806_12996852	3300017928	Freshwater Sediment	DPAAPALSMRRARSTFICGHLAAGTPVGVLLKVTGIAEAGSLARYARHVAGASSSKGVLRARCRAERTP
Ga0187814_102981062	3300017932	Freshwater Sediment	HLAAGTPVPVLLAITGIAEAGSPARYARHVPGISSSTGALRARGRAETVP
Ga0187801_104682711	3300017933	Freshwater Sediment	LAAGTPVPALLAVTGIAEAGSLARYARHVAGISSSKGALRARCRAERTR
Ga0187819_105825012	3300017943	Freshwater Sediment	SLRRARSSFICGHLAAGTPIPVLLAVTGIAEAGSLVRYARHVAGISSSTGALRARCRAELTR
Ga0187776_105259212	3300017966	Tropical Peatland	RARSSFICGHLAAGTPVPVLLAITGIAEAGSLARYARHVPGISSSTGALRARCRAERTR
Ga0187777_103489472	3300017974	Tropical Peatland	CGHLAAGTSIPVLLAITGIAEAGSLARYARHVAGISSSTGALRARWRAERTR
Ga0187782_110516511	3300017975	Tropical Peatland	LAADPAAPALSMRRARSTFICGHLAAGTPVGVLLAITGIAEAGSVARYARHVNGISSSKGALRGRWRAENTR
Ga0187822_102498181	3300017994	Freshwater Sediment	LAADPAAPRLSLRRARSSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSTGALRARWRAETTR
Ga0187815_101541223	3300018001	Freshwater Sediment	RLSLRRTRAAFICGHLAAGTPAGVLLAITGIAGAGSLARYARHVAGVSSSRGVLRERWRVERTP
Ga0187804_103657871	3300018006	Freshwater Sediment	TFVCGHLAAGTPVPALLAVTGIAEAGSLARYARHVAGISSSKGALRARCRAERTR
Ga0187805_100634511	3300018007	Freshwater Sediment	RATFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARCRAERTR
Ga0187805_105230081	3300018007	Freshwater Sediment	HLAAGTPVPVLLAVTGIAEAGSLARYARHVAGVSSSKGALRARWRAETGP
Ga0187769_103075081	3300018086	Tropical Peatland	LAADPAAPRLTLGRCRSSFICGHLAAGTPVPVLLAITGIAEAGSLARYARHVPGISSSTGALRARCRAERTR
Ga0187771_113497591	3300018088	Tropical Peatland	SMRRARSTFICGHLAAGTPVGVLLAITGIAEAGSLARYARHVAGISSSAGALRARCRAERTP
Ga0187770_117674111	3300018090	Tropical Peatland	SFICGHLAAGTPVPVLLAITGIAGAGSLARYARHVPGISSSTGALRARCRTERTR
Ga0213874_102819042	3300021377	Plant Roots	HLAAGTPLHDLLAITGIVEAESLARYARHVPGVCRSKAALRARWRAEARR
Ga0210387_112373222	3300021405	Soil	NFVNNFAGRLAWDPGAPPLSMGRARSSFICDHLAAGTALRTLLAITGIIEAESLARYARHVPAVSSSKAALRARWRSEATR
Ga0210384_118842521	3300021432	Soil	RCPAGDPAAPGLSMSRARSSFICDHLAAGTAISALLAITGIMEAESLARYARHVPGVSSSKAVLRARWLAETAR
Ga0210402_106823532	3300021478	Soil	ARCPAGDPAAPGLSMSRARSSFICDHLAAGTAISALLAITGIMEAGSLARYARHVPGVSSSKAVLRARWLAETAR
Ga0213853_109713062	3300021861	Watersheds	SLRRARATFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARCRAERTR
Ga0224563_10123172	3300022731	Soil	LAAGTPVGVLLAVTGIAEAGSLARYARHVPGVSPSKGVLRERSRAERKL
Ga0224556_10855921	3300024295	Soil	RSYKNFVTSFARSLTADPAAPGLSMRRARSSFICDHLAAGTPVAVLLSITGIAEAGSLARYAGGVSSSKGALRARWRAERTR
Ga0207653_102623871	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RQARSSFICHHLAAGTLIPVLLAIAGIAEAGSLARYARHVPGSGSSKGALRARCRAERTR
Ga0207646_110101501	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ARLSLRQARSSFICHHLAAGTLIPVLLAIAGIAEAGSLARYARHVPGSGSSKGALRARCRAERTR
Ga0207646_111491682	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TFICGHLAAGTPVGVLLAVTGIAEAGSLARYARHVPGVSPSKGVLRERWRAERKL
Ga0207700_102153311	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HLAAGTAISALLAITGIMEAESLARYARHVPGVSSSKAVLRARWLAETAR
Ga0209686_11284122	3300026315	Soil	ICDHLAAGTPLRALLAITGITEAESLARYARHVQGVSPSKAVLRARWHAEARQ
Ga0209155_12223581	3300026316	Soil	DHLAAGTPLRALLAITGITEAESLARYARHVQGVSPSKAVLRARWHAEARQ
Ga0257162_10235561	3300026340	Soil	ARDPAGPVLSAGRCRASFICDHLAAGTTLHELLAIAGITEPESLARCAAHVPGMSSSKAALRARWHAENPR
Ga0208043_11703432	3300027570	Peatlands Soil	SSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARWRAERTR
Ga0208044_10913962	3300027625	Peatlands Soil	AAPRLSAGRARATFICGHLATGTPVPVLLAVTGIAEAGSLARYARHVAGISSSTGALRARCRAELTR
Ga0208565_11177441	3300027662	Peatlands Soil	AAGTPVGVLLKITGIAEAGSLARYARHVAGISSSTGALRARCRAETSS
Ga0209517_103090231	3300027854	Peatlands Soil	SADPAAPRLSLRRARSSFICDHLAAGTTVPVLLAVTGIAEAGSLARYARYVPGISSSKGALRARCRAERSR
Ga0209283_106052382	3300027875	Vadose Zone Soil	FARSLAADPAAPGLSVRRARATFICGHLAAGTPVGVLLAVTGIAEAGSLARYACHVPGVSPSKGVLRERWHAERKL
Ga0209068_108364121	3300027894	Watersheds	RRARATFICHHLAAGTPVPVLLAITGITEAGSLARYARHVRGISSSKGALRARWRAERTP
Ga0209415_104198481	3300027905	Peatlands Soil	NGFARSLTADPAAPGLSMRRARSSFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGALRARWRAERTR
Ga0209415_104793751	3300027905	Peatlands Soil	KNFVTGFARGLAADPAAPRLSAGRARATFICGHLATGTPVPVLLAVTGIAEAGSLARYARHVPGISSSKGVLRARWRAERTR
Ga0311339_102770312	3300029999	Palsa	IPAAAGTPVPVLLAAAGIAEAESLARYARHVPGVSSSKAALRARWLAETSR
Ga0310037_101276182	3300030494	Peatlands Soil	ICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVRGIGSSKGALRARWRAERTP
Ga0311372_100512441	3300030520	Palsa	DHLAAGTSLAGLLAAAGITEAESLARYARHVPGVSSSKAALRARWLAEGRR
Ga0307497_101941172	3300031226	Soil	ADPAAATLSLRRARSSFICDHLAGGTPVPVLLAITGIAEAGSLARYARHVPGISSSKGALRARWRAEAAP
Ga0318542_101694282	3300031668	Soil	PSSAGTPVPVLLAVTGIAEAGSLARYARHVPGTSSSKGALRARWRAERTP
Ga0318493_101186541	3300031723	Soil	APPLSMSRARSSFICDHLAAGTPLRTLLAVTGILEVESLARYARHVPGMTGSKAALRARWHVETAW
Ga0318493_106774042	3300031723	Soil	RRARSTFICGHLAAGTPVGVLLSITGIAEAGSLARYARHVAGISSSAGVLRERWRAERAR
Ga0318502_104581511	3300031747	Soil	PALSMRRARSTFICGHLAAGTPVGVLLAITGIAEAGSLARYARHVAGISSSTGALRASWRAERTR
Ga0307475_110280671	3300031754	Hardwood Forest Soil	WDPGAPPLSMSRARSSFICDHLAAGTALRALLAITGIAEAESLARYARHVPGVTASKAALRARWRAETAR
Ga0318535_105343272	3300031764	Soil	LSMSRARSSFICDHLAAGTPLRTLLAVTGILEVESLARYARHVPGMTGSKAALRARWHVETAR
Ga0318526_102054292	3300031769	Soil	PGPPSSAGTPVPVLLAVTGIAEAGSLARYARHVPGTSSSKGALRARWRAERTP
Ga0318523_100462041	3300031798	Soil	RARSSFICDHLAAGTPLRALLAITGIAEAGSLARYARHVPGVTASKAALRGRWRAEAAR
Ga0307478_106275012	3300031823	Hardwood Forest Soil	LSVRRARATFICGHLAAGTPVGVLLAVTGIAEAGSLARYARHVPGVGPSKGVLRERWRAERKL
Ga0307478_109331122	3300031823	Hardwood Forest Soil	LAWDPDAPALSASRARSSFICDHLSTGTPLRTLLAITGIAEAESLARYARHVPAVSSSKAALRARWRAEATG
Ga0310916_101265592	3300031942	Soil	SSFVCDHLAAGTPLRALLAITGIAEAGSLARYARHVPGVTASKAALRGRWRAEAAR
Ga0310910_100955512	3300031946	Soil	LSMRRARSTFICGHLAAGTPVGVLLAITGIAEAGSLARYARHVAGISSSTGALRASWRAERTR
Ga0318558_105812921	3300032044	Soil	FICDHLAAGTPPRPLLAVTGIFEVESLARYARHVPGMTGSKAALRARWHVETAR
Ga0311301_108479532	3300032160	Peatlands Soil	MRRARSTFICGHLAAGTPVGVLLKVTGIAEAGSLARYARHVAGVSSSKGVLRARCRAERT
Ga0311301_115549482	3300032160	Peatlands Soil	YKNFVTNFARGLAADPAASALSMRRARAAFICGHLAGGTPVPVLLAITGIAEAGSLARYARHVPGISSSKGALRARWRAETGP
Ga0311301_125090081	3300032160	Peatlands Soil	ARATFICGHLAAGTSVPVLLAVTGIAEAGSLARYARHVRGISSSKGALRARWRAERTP
Ga0335085_103521961	3300032770	Soil	ARSAFICGHLAAGTPVPVLLAVTGIAEAGSLARYARHVRGISSSTGALRARCRAEHTR
Ga0335085_107077952	3300032770	Soil	SSFICGHLAAGTPVGVLLKIAGIAEAGSLARYARHVAGISSSTATLRERWRAERTR
Ga0335082_114048141	3300032782	Soil	AAPGLSMRRARSTFICGHLAAGTPVPVLLAVTGIAEAGSLARYARQVPGISSSKGALRARWRAESTR
Ga0335079_102312131	3300032783	Soil	ALSMRRARSTFICGHLAAGTPVGAVLAITGIAEAGSLARYARHVAGTSSSTGALRARWRAETTR
Ga0335079_108892872	3300032783	Soil	RARSTFICGHLAAGTPVPALLAITGIAEAGSLARYARHVAGISSSTGALRARCRAERTP
Ga0335079_110519181	3300032783	Soil	FICGHLAAGTPVGVLLAVTGIAEAGSLARYARHVAGVSSSKGALRERWRAERAW
Ga0335078_102915751	3300032805	Soil	PAAPGLSMRRARSSFICDHLAAGTPVAVLLSITGIAEAGSLARYARHAGGISSSKGALRARWRAERIR
Ga0335080_102697542	3300032828	Soil	FICDHLATGTPVPVLLAVTGIAGAGSLARYARHVPGISSSTGALRARCRAELTR
Ga0335080_107339562	3300032828	Soil	RGLSADPAAPGLSMRRARSSFICGHLAAGTPVPMLLAITGIAEAGSLARYARHVPGISSSTGALRARCRAERTR
Ga0335080_120221862	3300032828	Soil	FICGHLAAGTPIPVLLEIAGIAEAGSLARYARHVAGISSSTGALRARCRAERTP
Ga0335069_100389888	3300032893	Soil	VRRARPAFICGHLAAGTPVGVLLSITGIAEAGSLAHYARHVAGISSSAGALRERWRAERA
Ga0335075_108822782	3300032896	Soil	MRRARSTFICGHLASGTPVGVLLKVTGIAEAGSLARYARHVAGVSSSKGVLRARCRAERT
Ga0335084_106021471	3300033004	Soil	FICGHLAAGTPVGVLLSITGIAEAGSLARYARHVVGISSSAGVLRARWRAERAR
Ga0335077_108649662	3300033158	Soil	ARSAFICGHLAAGTPVPVLLAVTGIAEAGSLARYARQVPGISSSKGALRARWRAESTR
Ga0326726_107900991	3300033433	Peat Soil	ARSSFICDHLAAGTPVPVLLAITGIAEAGSLARYARHVPGISSSTGALRARWRAETGP
Ga0326731_11308662	3300033502	Peat Soil	DPAAAALSLRRARSSFICDHLAAGTPVPVLLAITGIAEAGSLARYARHVPGISSSTGALRARWRAETGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089582

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences