Metagenome / Metatranscriptome Family F089471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	94 residues
Representative Sequence	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Number of Associated Samples	100
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.90 %
% of genes near scaffold ends (potentially truncated)	44.04 %
% of genes from short scaffolds (< 2000 bps)	77.98 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.798 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.514 % of family members)
Environment Ontology (ENVO)	Unclassified (46.789 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.798 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 63.27% β-sheet: 0.00% Coil/Unstructured: 36.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00196	GerE	16.51
PF12847	Methyltransf_18	5.50
PF13847	Methyltransf_31	5.50
PF03404	Mo-co_dimer	4.59
PF13191	AAA_16	1.83
PF00496	SBP_bac_5	1.83
PF07690	MFS_1	0.92
PF00561	Abhydrolase_1	0.92
PF04545	Sigma70_r4	0.92
PF00012	HSP70	0.92
PF03640	Lipoprotein_15	0.92
PF04075	F420H2_quin_red	0.92
PF03704	BTAD	0.92
PF04542	Sigma70_r2	0.92
PF01344	Kelch_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.92
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.92
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.92
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.92
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.92
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.92
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.80 %
Unclassified	root	N/A	42.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.80 %
Unclassified	root	N/A	42.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.80 %
Unclassified	root	N/A	42.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.12 %
Unclassified	root	N/A	42.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	8.26 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.75 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.83 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.59 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	3.67 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.75 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.83 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.83 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Pseudosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium	3.67 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	3.67 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	2.75 %
unclassified Propionibacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.83 %
Klenkia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia	0.92 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.92 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.92 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Pseudosporangium ferrugineum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	3.67 %
Kribbella pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	3.67 %
Nonomuraea aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea aurantiaca	2.75 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.92 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.92 %
unclassified Jatrophihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans	0.92 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.92 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.92 %
Klenkia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	0.92 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Pseudosporangium ferrugineum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	3.67 %
Kribbella pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	3.67 %
Nonomuraea aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea aurantiaca	2.75 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Mycobacterium sp. ITM-2017-0098	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ITM-2017-0098	0.92 %
Frankia sp. Iso899	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	0.92 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.92 %
Jatrophihabitans sp. GAS493	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	0.92 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.92 %
Klenkia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	0.92 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN01EYBZ1	Not Available	508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100803287	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300005162\|Ga0066814_10108908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	526	Open in IMG/M
3300005328\|Ga0070676_10340917	Not Available	1028	Open in IMG/M
3300005330\|Ga0070690_100726636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	765	Open in IMG/M
3300005336\|Ga0070680_101541790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	575	Open in IMG/M
3300005337\|Ga0070682_100644416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300005337\|Ga0070682_100721511	Not Available	801	Open in IMG/M
3300005338\|Ga0068868_100050507	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300005344\|Ga0070661_100125173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1928	Open in IMG/M
3300005347\|Ga0070668_100028117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4269	Open in IMG/M
3300005353\|Ga0070669_101569893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300005354\|Ga0070675_100774281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876	Open in IMG/M
3300005355\|Ga0070671_100148587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1978	Open in IMG/M
3300005356\|Ga0070674_100556694	Not Available	963	Open in IMG/M
3300005364\|Ga0070673_101791420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300005366\|Ga0070659_100490612	Not Available	1046	Open in IMG/M
3300005436\|Ga0070713_100305631	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005439\|Ga0070711_100732663	Not Available	834	Open in IMG/M
3300005539\|Ga0068853_100446034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1217	Open in IMG/M
3300005546\|Ga0070696_100849456	Not Available	754	Open in IMG/M
3300005548\|Ga0070665_100137273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2448	Open in IMG/M
3300005577\|Ga0068857_101616954	Not Available	633	Open in IMG/M
3300005617\|Ga0068859_100281267	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300005764\|Ga0066903_103652942	Not Available	828	Open in IMG/M
3300005983\|Ga0081540_1009946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6485	Open in IMG/M
3300005983\|Ga0081540_1015644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4791	Open in IMG/M
3300006031\|Ga0066651_10184251	Not Available	1102	Open in IMG/M
3300006163\|Ga0070715_10196158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1023	Open in IMG/M
3300006173\|Ga0070716_100042322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2542	Open in IMG/M
3300006175\|Ga0070712_100035635	Not Available	3378	Open in IMG/M
3300006578\|Ga0074059_12109876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1312	Open in IMG/M
3300006755\|Ga0079222_12519303	Not Available	517	Open in IMG/M
3300006804\|Ga0079221_10025211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2465	Open in IMG/M
3300006806\|Ga0079220_10373636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	918	Open in IMG/M
3300006881\|Ga0068865_100100505	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300006903\|Ga0075426_11146554	Not Available	589	Open in IMG/M
3300006953\|Ga0074063_13509847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1182	Open in IMG/M
3300007076\|Ga0075435_100768384	Not Available	838	Open in IMG/M
3300009098\|Ga0105245_10183518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	2000	Open in IMG/M
3300009147\|Ga0114129_11342278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea aurantiaca	884	Open in IMG/M
3300009162\|Ga0075423_11971750	Not Available	632	Open in IMG/M
3300009174\|Ga0105241_10663039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea aurantiaca	949	Open in IMG/M
3300009176\|Ga0105242_11017250	Not Available	837	Open in IMG/M
3300009176\|Ga0105242_11848250	Not Available	643	Open in IMG/M
3300009176\|Ga0105242_13027578	Not Available	520	Open in IMG/M
3300009177\|Ga0105248_10530148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328	Open in IMG/M
3300009545\|Ga0105237_10431754	Not Available	1323	Open in IMG/M
3300009792\|Ga0126374_11078691	Not Available	635	Open in IMG/M
3300010326\|Ga0134065_10491363	Not Available	510	Open in IMG/M
3300010373\|Ga0134128_10699179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea aurantiaca	1126	Open in IMG/M
3300010375\|Ga0105239_10245043	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300011107\|Ga0151490_1375858	Not Available	625	Open in IMG/M
3300011119\|Ga0105246_10167615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	1679	Open in IMG/M
3300012951\|Ga0164300_10111871	Not Available	1218	Open in IMG/M
3300012955\|Ga0164298_10207534	Not Available	1150	Open in IMG/M
3300012961\|Ga0164302_10024906	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300012961\|Ga0164302_10748248	Not Available	731	Open in IMG/M
3300012985\|Ga0164308_10265608	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300012985\|Ga0164308_12254222	Not Available	507	Open in IMG/M
3300012986\|Ga0164304_10047380	Not Available	2320	Open in IMG/M
3300012986\|Ga0164304_10079499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1891	Open in IMG/M
3300012987\|Ga0164307_10093038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	1865	Open in IMG/M
3300012989\|Ga0164305_10023774	Not Available	3246	Open in IMG/M
3300013100\|Ga0157373_10063024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2625	Open in IMG/M
3300013104\|Ga0157370_10272614	Not Available	1563	Open in IMG/M
3300013296\|Ga0157374_10949879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ITM-2017-0098	878	Open in IMG/M
3300019890\|Ga0193728_1232689	Not Available	751	Open in IMG/M
3300022756\|Ga0222622_11421654	Not Available	511	Open in IMG/M
3300025735\|Ga0207713_1079274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	1186	Open in IMG/M
3300025893\|Ga0207682_10482574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	587	Open in IMG/M
3300025899\|Ga0207642_10441644	Not Available	786	Open in IMG/M
3300025903\|Ga0207680_10902113	Not Available	633	Open in IMG/M
3300025916\|Ga0207663_10303446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	1194	Open in IMG/M
3300025917\|Ga0207660_10302345	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300025927\|Ga0207687_10646253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	895	Open in IMG/M
3300025933\|Ga0207706_10070198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3081	Open in IMG/M
3300025935\|Ga0207709_11681111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	528	Open in IMG/M
3300025937\|Ga0207669_10038897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2744	Open in IMG/M
3300025937\|Ga0207669_10653749	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300025939\|Ga0207665_10002724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	11850	Open in IMG/M
3300025949\|Ga0207667_10050674	All Organisms → cellular organisms → Bacteria	4379	Open in IMG/M
3300025960\|Ga0207651_10206477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	1578	Open in IMG/M
3300025972\|Ga0207668_10022319	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300026088\|Ga0207641_11462498	Not Available	685	Open in IMG/M
3300026116\|Ga0207674_11340293	Not Available	685	Open in IMG/M
3300026118\|Ga0207675_100024416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	5620	Open in IMG/M
3300027725\|Ga0209178_1072611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	1123	Open in IMG/M
3300027907\|Ga0207428_10648850	Not Available	758	Open in IMG/M
3300028380\|Ga0268265_11073571	Not Available	798	Open in IMG/M
3300028787\|Ga0307323_10062480	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300028793\|Ga0307299_10030313	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300028799\|Ga0307284_10458278	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300028807\|Ga0307305_10011939	All Organisms → cellular organisms → Bacteria	3835	Open in IMG/M
3300028828\|Ga0307312_10489275	Not Available	812	Open in IMG/M
3300028875\|Ga0307289_10384414	Not Available	577	Open in IMG/M
3300031170\|Ga0307498_10388436	Not Available	546	Open in IMG/M
3300031572\|Ga0318515_10244977	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300031720\|Ga0307469_10112396	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1947	Open in IMG/M
3300031740\|Ga0307468_100215659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pseudosporangium → Pseudosporangium ferrugineum	1314	Open in IMG/M
3300031781\|Ga0318547_10914262	Not Available	548	Open in IMG/M
3300031820\|Ga0307473_10004391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	4406	Open in IMG/M
3300031858\|Ga0310892_10574811	Not Available	760	Open in IMG/M
3300031858\|Ga0310892_10907622	Not Available	617	Open in IMG/M
3300031896\|Ga0318551_10912708	Not Available	513	Open in IMG/M
3300031910\|Ga0306923_11533714	Not Available	696	Open in IMG/M
3300032174\|Ga0307470_10018325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	3094	Open in IMG/M
3300032261\|Ga0306920_103155192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	618	Open in IMG/M
3300034819\|Ga0373958_0212774	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.21%
Host-Associated	Host-Associated	46.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.29%
Plants	Host-Associated → Plants	46.79%
Aquatic	Environmental → Aquatic	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.93%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.51%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_06883600	2170459013	Grass Soil	MAMTVIRRITATVLTTIATVLGLLVAAVAAAASPVDPNDGNGFPTSVPQPPTGPPNTTIVNSGSPWWTFVLVAAAAVAVTLLVSLLISRLRRHDAAAQVAH
INPhiseqgaiiFebDRAFT_1008032872	3300000364	Soil	MTAVRRFTATILATVAXLLGLLAXAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0066814_101089081	3300005162	Soil	MTVIRRITATVLATVGTVLGLLAVARVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070676_103409172	3300005328	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070690_1007266362	3300005330	Switchgrass Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070680_1015417901	3300005336	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQ
Ga0070682_1006444161	3300005337	Corn Rhizosphere	MTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNAFTGPVPQGPATTPSTTIVNSGSPWWTFVLVAAAAVAVTLLVILAVSRMHRHPATAQLAH*
Ga0070682_1007215112	3300005337	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHST
Ga0068868_1000505072	3300005338	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070661_1001251732	3300005344	Corn Rhizosphere	MTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNTFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVIRAVSRMHRHAATAQLAH*
Ga0070668_1000281177	3300005347	Switchgrass Rhizosphere	TVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070669_1015698931	3300005353	Switchgrass Rhizosphere	GLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070675_1007742812	3300005354	Miscanthus Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPRSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070671_1001485873	3300005355	Switchgrass Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070674_1005566942	3300005356	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070673_1017914201	3300005364	Switchgrass Rhizosphere	VRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070659_1004906121	3300005366	Corn Rhizosphere	MTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVASAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0070713_1003056311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0070711_1007326631	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0068853_1004460341	3300005539	Corn Rhizosphere	MTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTASVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAH*
Ga0070696_1008494562	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLA
Ga0070665_1001372733	3300005548	Switchgrass Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDLATQIAH*
Ga0068857_1016169542	3300005577	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVT
Ga0068859_1002812671	3300005617	Switchgrass Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALV
Ga0066903_1036529421	3300005764	Tropical Forest Soil	MTVIRRIATTVLATVGTVLGLLAAASVAAASPVSPNDGYGFPTSVTQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQHSTATQL
Ga0081540_10099462	3300005983	Tabebuia Heterophylla Rhizosphere	MTVIRRITATVLATIGAVLGLLAAASVAAASPVSPNDGDGFPTSVTPPTGTTNTVVNSGSPWWAFVLVAAAAVAVTLLVALVVSRVRQHSTATQLAH*
Ga0081540_10156443	3300005983	Tabebuia Heterophylla Rhizosphere	MTVIRRITATILATVPSVLGLLATAPVAAASPVDPNDGNAFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAVGAIAVTLLVSLLISRLRRHDAATQIAH*
Ga0066651_101842512	3300006031	Soil	MSVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGDGFPTSVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVRRIRQHSTATQLAH*
Ga0070715_101961582	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070716_1000423223	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0070712_1000356353	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0074059_121098762	3300006578	Soil	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0079222_125193031	3300006755	Agricultural Soil	MPVIRRIAAAVLSTVGGLLGLLAAASVAAASPVSPNDGDGFPTSVTQPQTGTTSAVVNSGSPWWTFVLVAAAAVVVTLLVALVVSRIRQHSTATQLAH*
Ga0079221_100252114	3300006804	Agricultural Soil	MTAVRRITATILATVASLLGPLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0079220_103736362	3300006806	Agricultural Soil	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0068865_1001005053	3300006881	Miscanthus Rhizosphere	MTVIRRITATVLAIVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0075426_111465542	3300006903	Populus Rhizosphere	TAIRRITAGVLATVGTVVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0074063_135098472	3300006953	Soil	MTVIRRITATVLATVGTVVGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTSLVVDSGSPWWTFVLVAAAAAAVTLLVGLVVSRIRQHSTATQLAH*
Ga0075435_1007683841	3300007076	Populus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDRFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105245_101835182	3300009098	Miscanthus Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPASPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0114129_113422781	3300009147	Populus Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHAPATQIAH*
Ga0075423_119717501	3300009162	Populus Rhizosphere	ITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105241_106630392	3300009174	Corn Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0105242_110172501	3300009176	Miscanthus Rhizosphere	NQSANPKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105242_118482502	3300009176	Miscanthus Rhizosphere	MTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPLNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0105242_130275781	3300009176	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVS
Ga0105248_105301481	3300009177	Switchgrass Rhizosphere	TVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH*
Ga0105237_104317541	3300009545	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPLTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0126374_110786912	3300009792	Tropical Forest Soil	MTVIRRITAIVLATIAAVLGLLAAASVAAASPVSPNDGDGFPTSVTPPTGTTNTVVNSGSPWWAFVLVAAAAVAVTLLVALVV
Ga0134065_104913631	3300010326	Grasslands Soil	MSVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGDGFPTSVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVGRIRQHSTATQLAH*
Ga0134128_106991792	3300010373	Terrestrial Soil	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDSATQIAH*
Ga0105239_102450433	3300010375	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVAL
Ga0151490_13758581	3300011107	Soil	MTVIRRITATVLATVGTVLGLLAVASVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0105246_101676151	3300011119	Miscanthus Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVVPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0164300_101118712	3300012951	Soil	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPCWTFVLVAVAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164298_102075342	3300012955	Soil	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPSDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164302_100249063	3300012961	Soil	MNCWRSLPKLTNQSANPKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASMPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0164302_107482482	3300012961	Soil	MTAIRRLITTVLATVGTVAGLLVTAALAAAAPAPVNDGNAFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLLAVSRMHRHTTTAQLAH*
Ga0164308_102656082	3300012985	Soil	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQGPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIR
Ga0164308_122542222	3300012985	Soil	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAV
Ga0164304_100473803	3300012986	Soil	MTVICRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0164304_100794993	3300012986	Soil	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVRRLRRHDPATQIAH*
Ga0164307_100930382	3300012987	Soil	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRRHDPATQIAH*
Ga0164305_100237741	3300012989	Soil	MTVICRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLL
Ga0157373_100630244	3300013100	Corn Rhizosphere	AASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH*
Ga0157370_102726142	3300013104	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNAGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH*
Ga0157374_109498792	3300013296	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVT
Ga0193728_12326892	3300019890	Soil	MTVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNPVVDSGSPWWAFVLVAAAAIAVTLLVGLVVSRIRQHSTATQLAH
Ga0222622_114216541	3300022756	Groundwater Sediment	MTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNPVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQL
Ga0207713_10792743	3300025735	Switchgrass Rhizosphere	MTAVRRITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207682_104825742	3300025893	Miscanthus Rhizosphere	VPSRRPGPTSATWSGGAAVAEAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207642_104416441	3300025899	Miscanthus Rhizosphere	RRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207680_109021131	3300025903	Switchgrass Rhizosphere	MTAIRRITAGVLATVGTIVGLLIAAAAAAASPAPPNDGNAFSSVPQPPTNPPTTTIVNSGSPWWTFVLVAAAAIAVTLLVSLVASRLRRHATATQLAH
Ga0207663_103034463	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207660_103023451	3300025917	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQDSTATQLAH
Ga0207687_106462531	3300025927	Miscanthus Rhizosphere	ILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207706_100701984	3300025933	Corn Rhizosphere	AASPVDPKDGNPFPTSVPQSPASPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207709_116811111	3300025935	Miscanthus Rhizosphere	LATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207669_100388974	3300025937	Miscanthus Rhizosphere	MTAVRHITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207669_106537492	3300025937	Miscanthus Rhizosphere	MTVIRRITATVLAMVGTVLGLLVAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207665_100027241	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VDANDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVGRLRRHDPATQIAH
Ga0207667_100506745	3300025949	Corn Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHST
Ga0207651_102064771	3300025960	Switchgrass Rhizosphere	PAMTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0207668_100223191	3300025972	Switchgrass Rhizosphere	TVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207641_114624982	3300026088	Switchgrass Rhizosphere	RSLPKLTNQSANSKRSTMTVIRRITATVLAMVGTVLGLLAADSVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0207674_113402931	3300026116	Corn Rhizosphere	MTAVRRITATILATVASLLGLLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLV
Ga0207675_1000244161	3300026118	Switchgrass Rhizosphere	AAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0209178_10726112	3300027725	Agricultural Soil	MTAVRRITATILATVASLLGPLATAAVAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLVSRLRRHDPATQIAH
Ga0207428_106488502	3300027907	Populus Rhizosphere	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0268265_110735712	3300028380	Switchgrass Rhizosphere	LPTLTNQSANSKRSTMTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVSSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0307323_100624802	3300028787	Soil	MTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307299_100303132	3300028793	Soil	MTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAA
Ga0307284_104582781	3300028799	Soil	ATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307305_100119392	3300028807	Soil	MTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTSVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307312_104892751	3300028828	Soil	MTVIRRITATVLATVGTVLGLLAAASVAAASPVSPNDGNGFPTSAPQPPTGTPTNPVVDSGSPWWTFVLVAAAAVAVTLLVGLVVSRIRQHSTATQLAH
Ga0307289_103844141	3300028875	Soil	MTVIRRITATVLAAVGTVLGLLAAASVAAASPVSPNDGNGFPTPVPQPPTGTPTNSVVDSGSPWWTFVLVAAAAVAVT
Ga0307498_103884361	3300031170	Soil	MTVIRRITATVLATVGTVLGLLAVASVAAASPVSPNDGDGFPTTVSQPPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQLAH
Ga0318515_102449771	3300031572	Soil	MTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQHSTATQLAH
Ga0307469_101123962	3300031720	Hardwood Forest Soil	MTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTGPVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAQ
Ga0307468_1002156592	3300031740	Hardwood Forest Soil	MTAVRRITATILATVASLLGLLATAAIAAASPVDPNDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0318547_109142621	3300031781	Soil	MTVIRRIATTVLATVGTVLGLLAAASVAAASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVNRIRQ
Ga0307473_100043916	3300031820	Hardwood Forest Soil	AMTAVRHITATILATVASLLGLLATAAIAAASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0310892_105748112	3300031858	Soil	MTAVRRITATILATVASLLGLLATAAVAAASPVVPNDGDPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH
Ga0310892_109076221	3300031858	Soil	MTVIRRITATVLAMVGTVLGLLAAASVAAASPVSPNDGDGFPASVPQAPTGTTNTVVNSGSPWWTFVLVAAAAVAVTLLVALVVSRIRQHSTATQL
Ga0318551_109127081	3300031896	Soil	MTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAA
Ga0306923_115337143	3300031910	Soil	MTVIRRIATTVLATVGTVLGLLAAASVASASPVSPNDGYGFPTSVTQSPTGTTNTVVNSGSPWWTFVLVAAAA
Ga0307470_100183254	3300032174	Hardwood Forest Soil	MTAIRRLITAILATVGTIAGLLVTAALAAATPAPVNDGNAFTASVPQGPATTPTTTIVNSGSPWWTFVLVAAAAVAVTLLVLFAVSRIHRHTTTAQLAH
Ga0306920_1031551922	3300032261	Soil	TVLATVASALGLLATAAAVAGSPVDPNDGNGFPTSVPQSPTNPPSTTIVNNGSPWWTFVLVAAAAVAVTLLVSLLISRLRRHDAAAQIAH
Ga0373958_0212774_42_341	3300034819	Rhizosphere Soil	MTAVRRITATILATVASLLGLLATAAIADASPVDPKDGNPFPTSVPQSPTSPPNTTIVNNGSPWWTFVLVATAAVAVTLLVSLLVSRLRHHDPATQIAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences