Metagenome / Metatranscriptome Family F089174

Basic Information
Family ID	F089174
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	78 residues
Representative Sequence	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.06 %
% of genes near scaffold ends (potentially truncated)	28.44 %
% of genes from short scaffolds (< 2000 bps)	88.99 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Bacteria (50.459 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.936 % of family members)
Environment Ontology (ENVO)	Unclassified (53.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.459 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.60% β-sheet: 0.00% Coil/Unstructured: 43.40%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
f.1.3.1: delta-Endotoxin (insectocide), N-terminal domain	d1w99a1	1w99	0.78221
a.7.3.1: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	d1kf6a1	1kf6	0.77772
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.77567
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.76802
a.47.2.1: t-snare proteins	d1vcsa1	1vcs	0.76402

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02566	OsmC	7.34
PF00753	Lactamase_B	1.83
PF00291	PALP	0.92
PF04199	Cyclase	0.92
PF14534	DUF4440	0.92
PF13683	rve_3	0.92
PF01263	Aldose_epim	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	7.34
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	7.34
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.92
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.92
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.85 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	6.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	6.42 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	1.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	6.42 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100042951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4080	Open in IMG/M
3300002568\|C688J35102_120769009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1528	Open in IMG/M
3300004114\|Ga0062593_101388201	Not Available	750	Open in IMG/M
3300004156\|Ga0062589_100358308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1162	Open in IMG/M
3300004463\|Ga0063356_100178035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2472	Open in IMG/M
3300004479\|Ga0062595_101409859	Not Available	636	Open in IMG/M
3300004479\|Ga0062595_101627975	Not Available	603	Open in IMG/M
3300004803\|Ga0058862_12515610	Not Available	548	Open in IMG/M
3300005171\|Ga0066677_10192267	Not Available	1139	Open in IMG/M
3300005175\|Ga0066673_10022101	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300005177\|Ga0066690_10169079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300005293\|Ga0065715_10380341	Not Available	908	Open in IMG/M
3300005338\|Ga0068868_100398335	Not Available	1187	Open in IMG/M
3300005343\|Ga0070687_100616838	Not Available	747	Open in IMG/M
3300005367\|Ga0070667_100407919	Not Available	1237	Open in IMG/M
3300005445\|Ga0070708_100066591	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300005450\|Ga0066682_10863123	Not Available	542	Open in IMG/M
3300005458\|Ga0070681_10640843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	977	Open in IMG/M
3300005458\|Ga0070681_11206783	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005546\|Ga0070696_100491810	Not Available	974	Open in IMG/M
3300005564\|Ga0070664_101342528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	675	Open in IMG/M
3300006041\|Ga0075023_100094192	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300006047\|Ga0075024_100083790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300006057\|Ga0075026_100172830	Not Available	1121	Open in IMG/M
3300006176\|Ga0070765_102123353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300006237\|Ga0097621_101709542	Not Available	599	Open in IMG/M
3300006354\|Ga0075021_10466469	Not Available	797	Open in IMG/M
3300007265\|Ga0099794_10286530	Not Available	852	Open in IMG/M
3300009090\|Ga0099827_10511348	Not Available	1032	Open in IMG/M
3300009090\|Ga0099827_10849000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300009093\|Ga0105240_12078357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	590	Open in IMG/M
3300009162\|Ga0075423_11850937	Not Available	651	Open in IMG/M
3300009176\|Ga0105242_10794459	Not Available	936	Open in IMG/M
3300009177\|Ga0105248_10330414	Not Available	1717	Open in IMG/M
3300009545\|Ga0105237_10563255	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300010371\|Ga0134125_12503970	Not Available	561	Open in IMG/M
3300010375\|Ga0105239_11122823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	905	Open in IMG/M
3300010375\|Ga0105239_12323483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	624	Open in IMG/M
3300010396\|Ga0134126_11084238	Not Available	894	Open in IMG/M
3300010397\|Ga0134124_10198098	Not Available	1822	Open in IMG/M
3300010400\|Ga0134122_11067169	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010869\|Ga0126359_1474375	Not Available	506	Open in IMG/M
3300011444\|Ga0137463_1063211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300012096\|Ga0137389_10770268	Not Available	826	Open in IMG/M
3300012208\|Ga0137376_10380387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300012210\|Ga0137378_10370898	Not Available	1329	Open in IMG/M
3300012211\|Ga0137377_11101103	Not Available	724	Open in IMG/M
3300012211\|Ga0137377_11620240	Not Available	571	Open in IMG/M
3300012212\|Ga0150985_109229524	Not Available	628	Open in IMG/M
3300012349\|Ga0137387_10873551	Not Available	651	Open in IMG/M
3300012361\|Ga0137360_11821876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	514	Open in IMG/M
3300012683\|Ga0137398_10569052	Not Available	782	Open in IMG/M
3300012924\|Ga0137413_10457923	Not Available	930	Open in IMG/M
3300012924\|Ga0137413_10649266	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300012924\|Ga0137413_10940280	Not Available	674	Open in IMG/M
3300012924\|Ga0137413_11336423	Not Available	577	Open in IMG/M
3300012929\|Ga0137404_10380543	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300012929\|Ga0137404_10797625	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300012929\|Ga0137404_12089489	Not Available	529	Open in IMG/M
3300012930\|Ga0137407_10909539	Not Available	832	Open in IMG/M
3300012955\|Ga0164298_11204232	Not Available	574	Open in IMG/M
3300012984\|Ga0164309_10894936	Not Available	723	Open in IMG/M
3300012989\|Ga0164305_10161487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1533	Open in IMG/M
3300012989\|Ga0164305_10506267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300013297\|Ga0157378_10161249	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300013297\|Ga0157378_10773111	Not Available	984	Open in IMG/M
3300013297\|Ga0157378_12851507	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300014498\|Ga0182019_10329766	Not Available	1025	Open in IMG/M
3300017792\|Ga0163161_10665290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	864	Open in IMG/M
3300017927\|Ga0187824_10096013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300018433\|Ga0066667_10290388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1265	Open in IMG/M
3300019877\|Ga0193722_1055845	Not Available	995	Open in IMG/M
3300019879\|Ga0193723_1025494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1798	Open in IMG/M
3300019881\|Ga0193707_1000905	All Organisms → cellular organisms → Bacteria → Acidobacteria	10671	Open in IMG/M
3300019885\|Ga0193747_1056125	Not Available	976	Open in IMG/M
3300020004\|Ga0193755_1045100	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300020021\|Ga0193726_1216799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300020022\|Ga0193733_1176628	Not Available	562	Open in IMG/M
3300020060\|Ga0193717_1056551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300020062\|Ga0193724_1085891	Not Available	649	Open in IMG/M
3300020170\|Ga0179594_10103013	Not Available	1028	Open in IMG/M
3300021086\|Ga0179596_10096190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300021344\|Ga0193719_10000856	All Organisms → cellular organisms → Bacteria → Acidobacteria	11821	Open in IMG/M
3300021344\|Ga0193719_10073652	Not Available	1483	Open in IMG/M
3300021559\|Ga0210409_10404524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300024288\|Ga0179589_10176262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300024330\|Ga0137417_1073216	Not Available	573	Open in IMG/M
3300025899\|Ga0207642_10024882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2413	Open in IMG/M
3300025900\|Ga0207710_10332510	Not Available	772	Open in IMG/M
3300025910\|Ga0207684_10066239	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300025911\|Ga0207654_10157093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300025912\|Ga0207707_10350039	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300025914\|Ga0207671_11063996	Not Available	636	Open in IMG/M
3300026322\|Ga0209687_1060818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300027610\|Ga0209528_1070744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300027882\|Ga0209590_10232257	Not Available	1173	Open in IMG/M
3300027903\|Ga0209488_10853854	Not Available	641	Open in IMG/M
3300027910\|Ga0209583_10291182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300027915\|Ga0209069_10032387	Not Available	2447	Open in IMG/M
3300031231\|Ga0170824_119987151	Not Available	1268	Open in IMG/M
3300031720\|Ga0307469_10177954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300031720\|Ga0307469_11635900	Not Available	619	Open in IMG/M
3300031740\|Ga0307468_102373170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300032421\|Ga0310812_10030687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1967	Open in IMG/M
3300032770\|Ga0335085_10027808	All Organisms → cellular organisms → Bacteria	7925	Open in IMG/M
3300033412\|Ga0310810_10615909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300033412\|Ga0310810_11332013	Not Available	560	Open in IMG/M
3300033433\|Ga0326726_10000265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	50794	Open in IMG/M
3300034643\|Ga0370545_085812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.90%
Host-Associated	Host-Associated	21.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.56%
Plants	Host-Associated → Plants	20.18%
Aquatic	Environmental → Aquatic	7.34%
Human	Host-Associated → Human	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.76%
Sediment	Environmental → Aquatic → Sediment	6.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.50%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Peat	Environmental → Terrestrial → Peat	0.92%
Digestive System	Host-Associated → Human → Digestive System	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.88%
Loam	Environmental → Terrestrial → Soil → Loam	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.92%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.92%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000429514	3300002245	Forest Soil	MQAVSNPITQTKWKQVFQDTLFELDPTRLQPKLEAAQKAIEDRLAVLSGGASGCRELMELEDAKRTLEYLAREQQQT*
C688J35102_1207690092	3300002568	Soil	MQIVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSTVLSGGGSTPRELMELEDAKRTLRYLAEHELHAGM*
Ga0062593_1013882012	3300004114	Soil	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQV*
Ga0062589_1003583082	3300004156	Soil	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*
Ga0063356_1001780352	3300004463	Arabidopsis Thaliana Rhizosphere	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQA*
Ga0062595_1014098593	3300004479	Soil	MQVVANIPTQSKWKKSFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSGRDAGPRELMELEDALRTIRYLAKHELSS*
Ga0062595_1016279751	3300004479	Soil	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGM*
Ga0058862_125156101	3300004803	Host-Associated	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*
Ga0066677_101922671	3300005171	Soil	QAKWKQVFQEAVFELDPTRLQPKLEAAHKAVDDRLFEVLSGGNAGPRELMELEDAKRTLQYLAKHEL*
Ga0066673_100221014	3300005175	Soil	MQIVSKVSTQAKWKQVFQEAVFELDPTRLQPKLEAAHKAVDDRLFEVLSGGNAGPRELMELEDAKRTLQYLAKHEL*
Ga0066690_101690791	3300005177	Soil	MQILSNARTQAKWKQVFQEAVFELDPTRLQPKLEAANKAVEDRLFEVLSGGNAGPRELMELEDAKRTIQYLAKHEV*
Ga0065715_103803412	3300005293	Miscanthus Rhizosphere	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQATIALAGAEEHHPHSANALFQHGRCFPRRKEIAGNHIRY
Ga0068868_1003983352	3300005338	Miscanthus Rhizosphere	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGI*
Ga0070687_1006168381	3300005343	Switchgrass Rhizosphere	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*TIALAG
Ga0070667_1004079194	3300005367	Switchgrass Rhizosphere	MEGEILMQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGM*
Ga0070708_1000665913	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGSSGTREVMELEDALRTIRYLAKHELQT*
Ga0066682_108631232	3300005450	Soil	WKQKFQDAVFELDPTRLRPKLESAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELPI*
Ga0070681_106408432	3300005458	Corn Rhizosphere	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTLRYLAKHELQA*
Ga0070681_112067833	3300005458	Corn Rhizosphere	KQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRVPRELIELEDAQRTIRYLARHELQA*
Ga0070696_1004918101	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*TIALAGAEEHHPHSANA
Ga0070664_1013425281	3300005564	Corn Rhizosphere	MQIVSNAGTQTNLKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTLRYLAKHELQA*
Ga0075023_1000941922	3300006041	Watersheds	MQVVSNPRLQPKWKQAYQEAVFELDPTRLQPKLEAARRAVEDRLLQVGSRGSADHGELIELQDAQRTIRLLVRHELQA*
Ga0075024_1000837903	3300006047	Watersheds	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGSSTPRELMELEDAKRTLRYLAK
Ga0075026_1001728303	3300006057	Watersheds	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGSSTPRELMELEDAKRTLRYLAKHELHAEM*
Ga0070765_1021233531	3300006176	Soil	SINFTLRRILMQVVANIGTQLKWKQFFQDAVFELDPTRLQPKLEAAQKAIEDRYCNLASGQGASPRELMELEDALRTIRYLAKHELQT*
Ga0097621_1017095421	3300006237	Miscanthus Rhizosphere	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALR
Ga0075021_104664692	3300006354	Watersheds	MQVVANIPSQNKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELSS*
Ga0099794_102865302	3300007265	Vadose Zone Soil	MEAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT*
Ga0099827_105113481	3300009090	Vadose Zone Soil	MEAIANVGAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT*
Ga0099827_108490002	3300009090	Vadose Zone Soil	MAMQTITNVGTQAKWKQMFQEAVFELDPVRLQTKLEGAQKAVEDRLGEVISSGSGVPRELMELEDALRTIRYLAKHELQT*
Ga0105240_120783571	3300009093	Corn Rhizosphere	WKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTLRYLAKHELQA*
Ga0075423_118509372	3300009162	Populus Rhizosphere	MQVVANIPTQSKWKKSFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSGRDAGPRELMELEDA
Ga0105242_107944591	3300009176	Miscanthus Rhizosphere	MDSSISSCRFHIEGEILMQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGM*
Ga0105248_103304144	3300009177	Switchgrass Rhizosphere	MEGEILMQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGI*
Ga0105237_105632552	3300009545	Corn Rhizosphere	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELSS*
Ga0134125_125039702	3300010371	Terrestrial Soil	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELS
Ga0105239_111228234	3300010375	Corn Rhizosphere	SNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQV*
Ga0105239_123234831	3300010375	Corn Rhizosphere	SNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*
Ga0134126_110842381	3300010396	Terrestrial Soil	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSTMLSGGGSTPRELMELEDAKRTLRYLAKHELHAGM*
Ga0134124_101980982	3300010397	Terrestrial Soil	MQVVSNVSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGM*
Ga0134122_110671691	3300010400	Terrestrial Soil	SKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELENALRTIRYLAKHELSS*
Ga0126359_14743751	3300010869	Boreal Forest Soil	MQAMIKDTTEVKWNLAFQEAVFELNPMHLQPKLEMAQKAVEERLGEALSHSGVTRRELMELEDALRTIRYLAKHELQA*
Ga0137463_10632113	3300011444	Soil	LLACPNLNQEKVLMQIVSNASTQAKWKQAFQDAVFELDPTRLQPKLDAAQKAIEHRLSQVLSGGGTSPRELMELEDAKRTIRYLAKHELQS*
Ga0137389_107702681	3300012096	Vadose Zone Soil	MQAVANIGTQSKWKQTFQDAVFELDPTRLRPKLEAAQKAIEDRYCEVSGRDAGSRELMELEDALRTIRYLAKHELRS*
Ga0137376_103803873	3300012208	Vadose Zone Soil	MQVVANIPTQSKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELTS*
Ga0137378_103708982	3300012210	Vadose Zone Soil	MQVVANVGSQVKWKQMFQDAVFELDPVRLQTKLEGAQKAVEDRLGEVLSTGTAVPRELVELEDALRTIRYLA*
Ga0137377_111011031	3300012211	Vadose Zone Soil	MQVVANIPTQNKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELTS*
Ga0137377_116202401	3300012211	Vadose Zone Soil	MEAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVVAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT*
Ga0150985_1092295242	3300012212	Avena Fatua Rhizosphere	MQIVASNNSVRTIAWKKAFQDAVFELDPTRLKPKLDAAENAIDHRLTQILSAGSSDPRELMELEDAKRTIGYLAKHELQAEI*
Ga0137387_108735511	3300012349	Vadose Zone Soil	AGFCISPTAISNLRRIAMQVVANVGSQVKWKQMFQDAVFELDPVRLQTKLEGAQKAVEDRLGEVLSTGTAVPRELVELEDALRTIRYLA*
Ga0137360_118218762	3300012361	Vadose Zone Soil	APFFSVVSISFQGELSMQATTNFAPQSKWKQLFQEAVFELEPTRLQPKLEAAQQAVEHRLGEVLYGSGSTLREKMELEDALRTIRYLAKYELQA*
Ga0137398_105690521	3300012683	Vadose Zone Soil	MQATTNFAPQSKWKQLFQEAVFELEPTRLQPKLEAAQQAVEHRLGEVLYGSGSTLREKMELEDALRTIRYLAKYELQA*
Ga0137413_104579233	3300012924	Vadose Zone Soil	MQATTNFAPQSKWKQLFQEAVFELEPTRLQPKLAAAQQAVEHRLGEVLYGGGSTLREKMELEDALRTIRYLAKYELQA*
Ga0137413_106492661	3300012924	Vadose Zone Soil	MQTIANVSTHAKWKDVFQEAVFELDPTRLQPKLEAAQKAVEDHLGKVISGGGAGPRELMELEDALRTIRYLAQHELRS*
Ga0137413_109402802	3300012924	Vadose Zone Soil	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGSSTPRELMELEDAKRTLRYLAKHELRAENVG*
Ga0137413_113364232	3300012924	Vadose Zone Soil	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELLELEDALRTIRYLAKHELSS*
Ga0137404_103805435	3300012929	Vadose Zone Soil	MQVVANIPTQSKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELPI*
Ga0137404_107976251	3300012929	Vadose Zone Soil	NVGSQVKWKQMFQDAVFELDPVRLQTKLEGAQKAVEDRLGEVLSSGTAVPRELVELEDALRTIRYLAKHELQT*
Ga0137404_120894891	3300012929	Vadose Zone Soil	MQIVSNVSTQLKWKQAFQDAVFELDPTRLRPKLDAAQRAIEQRLSQVLSDGGSTPREVMELEDAKRTIRYLERHELQV*
Ga0137407_109095392	3300012930	Vadose Zone Soil	MQAVANVGSQVKWKQMFQDAVFELDPVRLQTKLEGAQKAVEDRLGEVLSSGTAVPRELVELEDALRTIRYLAKHELQT*
Ga0164298_112042322	3300012955	Soil	PQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAKRTLRYLAKHELHAGI*
Ga0164309_108949361	3300012984	Soil	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRVPRELIELEDAQRTIRYLARHELQA*
Ga0164305_101614875	3300012989	Soil	SLFSFQSQPNPRRISMQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELSS*
Ga0164305_105062671	3300012989	Soil	NWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA*
Ga0157378_101612496	3300013297	Miscanthus Rhizosphere	SMHIVSNAGTQTDWKQSFQVALFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQV*
Ga0157378_107731111	3300013297	Miscanthus Rhizosphere	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHEL
Ga0157378_128515071	3300013297	Miscanthus Rhizosphere	IPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELSS*
Ga0182019_103297662	3300014498	Fen	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGSSTPRELMELEDAKRTLRYLAKHELHAEI*
Ga0163161_106652902	3300017792	Switchgrass Rhizosphere	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA
Ga0187824_100960131	3300017927	Freshwater Sediment	MQIVANIGTQLKWKQVFQEAVFELDPTRLLPKLEAAQKAIEHRYCEVVSSRNTNPRELMELEDAMRTIRYLAKHELQS
Ga0066667_102903883	3300018433	Grasslands Soil	MQIVSKVSTQAKWKQVFQEAVFELDPTRLQPKLEAAHKAVDDRLFEVLSGGNAGPRELMELEDAKRTLQYLAKHEL
Ga0193722_10558452	3300019877	Soil	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDALRTIRYLAKHELSS
Ga0193723_10254943	3300019879	Soil	MQVVANIPTQSKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSGGGAGPRELMELEDALRTIRYLAKHELSS
Ga0193707_10009052	3300019881	Soil	MQAIANVPQSKWKKAFQEAVFELNPTLLQPKLEAAQKAVEDRLGEVLSESGAVPRELMELEDALRTIRYLAKHELQT
Ga0193747_10561252	3300019885	Soil	MQAIANVAPQSKWKKAFQEAVFELNPTLLQPKLEAAQKAVEDRLGEVLSESGAVPRELMELEDALRTIRYLAKHELQT
Ga0193755_10451002	3300020004	Soil	MQVVANIPTQSKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELPI
Ga0193726_12167991	3300020021	Soil	MQTISNVSTHAKWKDVFQEAVFELDPTRLQPKLEAAQKAVEDHLGKVISGGGAGPRELMELEDALRTIRYLAQHELRT
Ga0193733_11766281	3300020022	Soil	MQAIANVAPQSKWKKAFQEAVFELNPTLLQPKLEAAQKAVEDRLGEVLSESSAVPRELMELEDALRTIRYLAK
Ga0193717_10565515	3300020060	Soil	MQIVSNMNPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGTSSSRELMELEDAKRTLRYLAKHELQAEM
Ga0193724_10858912	3300020062	Soil	MQTVSNVSVQLKWKQAFQDAVFELDPTRLRPKLDAAQKAIEHRLSQVLSSGSSTPRELMELEDAKRTIRYLEKHELQV
Ga0179594_101030133	3300020170	Vadose Zone Soil	MEAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVVAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT
Ga0179596_100961903	3300021086	Vadose Zone Soil	MEAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT
Ga0193719_100008565	3300021344	Soil	MQAIANVAPQSKWKKAFQEAVFELNPTLLQPKLEAAQKAVEDRLGEVLSESSAVPRELMELEDALRTIRYLAKHELQT
Ga0193719_100736525	3300021344	Soil	MQVVANIPTQSKWKQKFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELTS
Ga0210409_104045243	3300021559	Soil	MQIVSNVGTQIKWKQAFQDAVFELDPTRLRPKLDAAQKAIEHRLSQVVSSLGSNPRELIELEDAKRTIRYLEKHELQA
Ga0179589_101762622	3300024288	Vadose Zone Soil	METIANVSTHAKWKDVFQEAVFELDPTRLQPKLEAAQKAVEDHLGKVISGGGAGPRELMELEDALRTIRYLAQHELRT
Ga0137417_10732161	3300024330	Vadose Zone Soil	KWKQVFQDAMFELDPTRLQPKLVVAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT
Ga0207642_100248825	3300025899	Miscanthus Rhizosphere	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQV
Ga0207710_103325102	3300025900	Switchgrass Rhizosphere	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAARKAIEQRLSTVLSGETSTPRELMELEDAQRTIRYLAKHELQA
Ga0207684_100662393	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQAIANVAAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGSSGTREVMELEDALRTIRYLAKHELQT
Ga0207654_101570932	3300025911	Corn Rhizosphere	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRTLRYLAKHELQA
Ga0207707_103500394	3300025912	Corn Rhizosphere	KQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRVPRELIELEDAQRTIRYLARHELQA
Ga0207671_110639962	3300025914	Corn Rhizosphere	MQVVANIPSQSKWKQTFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSRRDAGPRELMELEDAL
Ga0209687_10608184	3300026322	Soil	MQILSNARTQAKWKQVFQEAVFELDPTRLQPKLEAANKAVEDRLFEVLSGGNAGPRELMELEDAKRTIQYLAKHEV
Ga0209528_10707441	3300027610	Forest Soil	MQAVSNPITQTKWKQVFQDTLFELDPTRLQPKLEAAQKAIEDRLAVLSGGASGCRELMELEDAKRTLEYLAREQQQT
Ga0209590_102322572	3300027882	Vadose Zone Soil	MEAIANVGAQSKWKQVFQDAMFELDPTRLQPKLVAAQKAVEDRLGEVLSGGNSGTREVMELEDALRTIRYLAKHELQT
Ga0209488_108538542	3300027903	Vadose Zone Soil	MQATTNFAPQSKWKQLFQEAVFELEPTRLQPKLEAAQQAVEHRLGEVLYGSGSTLREKMELEDALRTIRYLAKYELQA
Ga0209583_102911822	3300027910	Watersheds	MQVVSNPRLQPKWKQAYQEAVFELDPTRLQPKLEAARRAVEDRLLQVGSRGSADHGELIELQDAQRTIRLLVRHELQA
Ga0209069_100323872	3300027915	Watersheds	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGGSTPRELMELEDAKRTLRYLAKHELHAEM
Ga0170824_1199871513	3300031231	Forest Soil	MQVVSNGSPQLKWKQAFQDAVFELDPTRLEPKLDAAQKAIEQRLSLVLSGGSSTPRELMELEDAKRTLRYLAKHELHAEM
Ga0307469_101779541	3300031720	Hardwood Forest Soil	MQVVANIPTQSKWKKSFQDAVFELDPTRLRPKLEAAQKAVEDRYCEVMSGRDAGPRELMELEDALRTIRYLAKHELSS
Ga0307469_116359002	3300031720	Hardwood Forest Soil	MQIVSNVDTKAKWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLSAVHSGDTAVPRELMELEDAQRTIRYLAKHELQV
Ga0307468_1023731701	3300031740	Hardwood Forest Soil	MQVVANIPTQSRWKQKFQDAVFELDPTRLRPKLEAAQKAIEDRYCEVVSSREAGPRELMELEDALRTIRYLAKHELPS
Ga0310812_100306871	3300032421	Soil	MQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRVPRELMELEDAQRTIRYLAKHELQA
Ga0335085_1002780810	3300032770	Soil	MQIVSNANAQTTWKQAFQDAVFELDPMRLLPKLERAQKAIEDRLAEVHSGDSTVPRELMELEDAQRTIRYLAKHELQA
Ga0310810_106159093	3300033412	Soil	FPMQIVSNAGTQTDWKQAFQDAVFELDPTRLLPKLERAQRAIEDRLAEVHSGDSRGPRELMELEDAQRTIRYLAKHELQA
Ga0310810_113320132	3300033412	Soil	MQIVSNAGTQTNWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLAEVHSGDSRGPRELMELEDAQRT
Ga0326726_1000026521	3300033433	Peat Soil	MQIVSNASTQIKWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLSEVRSGDSTVPRELMELEDAQRTIRYLAKHELPA
Ga0370545_085812_454_663	3300034643	Soil	RTKWKQAFQDAVFELDPTRLLPKLERAQKAIEDRLSEVHSGDSTVPRELMELEDAQRTIRYLARHELQA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089174

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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